Chy11G198400 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCCGTCTGCATTTCCAATTGCATCAACGACGCTCGTCTCCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCGGAATCCGACGCCGAGTTCATCCGATCCGTCAGTTCTAAGCTCAATCGAACTTCTCGAGTCGTCGACAGCATCTCTTGCCGTCAGATGTACCTCCGAAGCTACACTTTCTCTCGAGAAGAAGAGCGCGCGCCGGAGACCAAGACTAATAAGTGTTTCGCTAAAGTCGGAATGCGCCAAAAAATCTCTCGCCGGAAAAAGAAGAAGACCGCGGCGTCGGAATCCAGTGACGTCGATGAGAAGATTAGGAAATCTTCCAGGTTGAAGAAAGCGAAGGAGATTTCCTGCGCCGCTTTGACGTCTGTCTTCCGACGGTTGTTATCGTGCACCGCTAAAGTCGACGTCGCCGATACTATGCGAGAGGCTCATTAGTTTTTTTTCTCCTTTTCTTTTGGTTAAATTGCAAATTTCTCCCTTTGGAAAAAAAAGTGTAGGGACTAAATTCTAAAACTTAAAATTTTAGGGGTGAATTTGTAATTTAAATTTTCATTTTTCCTTTTTGGTTCATAGTCGTCGATGGAATTCAGCGAAGAAGGGGTGGGGATGGTGTACGGACATATTATGTAA ATGGCCTCCGTCTGCATTTCCAATTGCATCAACGACGCTCGTCTCCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCGGAATCCGACGCCGAGTTCATCCGATCCGTCAGTTCTAAGCTCAATCGAACTTCTCGAGTCGTCGACAGCATCTCTTGCCGTCAGATGTACCTCCGAAGCTACACTTTCTCTCGAGAAGAAGAGCGCGCGCCGGAGACCAAGACTAATAAGTGTTTCGCTAAAGTCGGAATGCGCCAAAAAATCTCTCGCCGGAAAAAGAAGAAGACCGCGGCGTCGGAATCCAGTGACGTCGATGAGAAGATTAGGAAATCTTCCAGGTTGAAGAAAGCGAAGGAGATTTCCTGCGCCGCTTTGACGTCTGTCTTCCGACGCGAAGAAGGGGTGGGGATGGTGTACGGACATATTATGTAA ATGGCCTCCGTCTGCATTTCCAATTGCATCAACGACGCTCGTCTCCCCGTCCGTCCCACCTACATAAACCTCTACAAGTGGCCGGAATCCGACGCCGAGTTCATCCGATCCGTCAGTTCTAAGCTCAATCGAACTTCTCGAGTCGTCGACAGCATCTCTTGCCGTCAGATGTACCTCCGAAGCTACACTTTCTCTCGAGAAGAAGAGCGCGCGCCGGAGACCAAGACTAATAAGTGTTTCGCTAAAGTCGGAATGCGCCAAAAAATCTCTCGCCGGAAAAAGAAGAAGACCGCGGCGTCGGAATCCAGTGACGTCGATGAGAAGATTAGGAAATCTTCCAGGTTGAAGAAAGCGAAGGAGATTTCCTGCGCCGCTTTGACGTCTGTCTTCCGACGCGAAGAAGGGGTGGGGATGGTGTACGGACATATTATGTAA MASVCISNCINDARLPVRPTYINLYKWPESDAEFIRSVSSKLNRTSRVVDSISCRQMYLRSYTFSREEERAPETKTNKCFAKVGMRQKISRRKKKKTAASESSDVDEKIRKSSRLKKAKEISCAALTSVFRREEGVGMVYGHIM* Homology
BLAST of Chy11G198400 vs. ExPASy TrEMBL
Match: A0A0A0KET2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G302120 PE=4 SV=1) HSP 1 Score: 247.3 bits (630), Expect = 4.0e-62 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Chy11G198400 vs. ExPASy TrEMBL
Match: A0A1S3CKF0 (uncharacterized protein LOC103501967 OS=Cucumis melo OX=3656 GN=LOC103501967 PE=4 SV=1) HSP 1 Score: 245.7 bits (626), Expect = 1.2e-61 Identity = 137/168 (81.55%), Postives = 137/168 (81.55%), Query Frame = 0
BLAST of Chy11G198400 vs. ExPASy TrEMBL
Match: A0A5A7SXD3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00590 PE=4 SV=1) HSP 1 Score: 238.0 bits (606), Expect = 2.4e-59 Identity = 127/134 (94.78%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of Chy11G198400 vs. ExPASy TrEMBL
Match: A0A6J1G522 (uncharacterized protein LOC111450987 OS=Cucurbita moschata OX=3662 GN=LOC111450987 PE=4 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 1.8e-51 Identity = 114/135 (84.44%), Postives = 118/135 (87.41%), Query Frame = 0
BLAST of Chy11G198400 vs. ExPASy TrEMBL
Match: A0A6J1L3K0 (uncharacterized protein LOC111499579 OS=Cucurbita maxima OX=3661 GN=LOC111499579 PE=4 SV=1) HSP 1 Score: 206.5 bits (524), Expect = 7.8e-50 Identity = 112/136 (82.35%), Postives = 116/136 (85.29%), Query Frame = 0
BLAST of Chy11G198400 vs. NCBI nr
Match: KAE8647064.1 (hypothetical protein Csa_023018 [Cucumis sativus]) HSP 1 Score: 252 bits (644), Expect = 1.51e-83 Identity = 139/166 (83.73%), Postives = 141/166 (84.94%), Query Frame = 0
BLAST of Chy11G198400 vs. NCBI nr
Match: XP_004148240.1 (uncharacterized protein LOC101218723 [Cucumis sativus]) HSP 1 Score: 244 bits (624), Expect = 9.54e-81 Identity = 129/132 (97.73%), Postives = 130/132 (98.48%), Query Frame = 0
BLAST of Chy11G198400 vs. NCBI nr
Match: XP_008463974.1 (PREDICTED: uncharacterized protein LOC103501967 [Cucumis melo]) HSP 1 Score: 242 bits (618), Expect = 1.43e-79 Identity = 137/168 (81.55%), Postives = 137/168 (81.55%), Query Frame = 0
BLAST of Chy11G198400 vs. NCBI nr
Match: KAA0035268.1 (uncharacterized protein E6C27_scaffold228G00590 [Cucumis melo var. makuwa]) HSP 1 Score: 235 bits (600), Expect = 4.64e-77 Identity = 127/134 (94.78%), Postives = 127/134 (94.78%), Query Frame = 0
BLAST of Chy11G198400 vs. NCBI nr
Match: XP_038902301.1 (uncharacterized protein LOC120088935 [Benincasa hispida]) HSP 1 Score: 225 bits (573), Expect = 6.03e-73 Identity = 122/134 (91.04%), Postives = 125/134 (93.28%), Query Frame = 0
BLAST of Chy11G198400 vs. TAIR 10
Match: AT5G02640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 101.3 bits (251), Expect = 6.8e-22 Identity = 66/147 (44.90%), Postives = 86/147 (58.50%), Query Frame = 0
BLAST of Chy11G198400 vs. TAIR 10
Match: AT3G46300.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46310.1); Has 37 Blast hits to 37 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 37; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 79.3 bits (194), Expect = 2.8e-15 Identity = 61/146 (41.78%), Postives = 79/146 (54.11%), Query Frame = 0
BLAST of Chy11G198400 vs. TAIR 10
Match: AT3G46310.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46300.1); Has 35 Blast hits to 35 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 72.4 bits (176), Expect = 3.4e-13 Identity = 37/74 (50.00%), Postives = 54/74 (72.97%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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