Chy11G198330 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G198330
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	WUSCHEL-related homeobox 3
Location	chrH11: 18672533 .. 18673872 (+)
RNA-Seq Expression	Chy11G198330
Synteny	Chy11G198330

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTCCATCAAGTATTACTCCTTCAAGATGGTGTCCAACACCAGAACAAGTGATGATTTTGGAAGAGATTTATAGAAATGGGCTTAAAACTCCTAACGCCACTCAAATTCAACATATTACTTCTCATCTTTCTTTCTATGGTAAAATTGAAGGCAAAAATGTTTTCTATTGGTTCCAAAATCACAAGGCTAGAGATCGCCAAAAGCTTAGGAGGAAACTCTATAAGCAGCTTCAACAACATCATTTCTTTATGAAACGACAACGTTTTGATGATCATCATCATGACCATCATCACTTCTTTCAATATTTCCTTCCTCACCATGTTCCCCAACTACTCCCACAGCTTCCTTCTCCCTCTTCTCTTCAGGTACTTACTCTTTTCTTTGTTGACTTTATTCATATTCAAATGTTTTGACTTTTTAGATGTACGTTCGAGAACAGATAATAATGGTGTAAGTTAAGTATATGTATATAAAAATTAATTTTCATTGTAATATATAAGTTTAATTATGATAAGGAAACAAAATTTTGGTATTATCAAAGCTGTGTACAACTCAAACAGTTGTTACATAAAAAAAAACTGTCAAGTGATAGATAATTTGATTTTTATTTGATTTTATTTTTTCAAATGAAGAATCTATGAGACTAGATGTAGCTTAACTAGATGCATCTAATTATCGTTTTTGTTGTAATTTAACATGGTTCTATAGATGAATTTTTTTTAAAAAAAAATTAGTGTTTTTTTTAGTGCATTCAATTTAGGTAGAAATTTGAACTAATTTTTTCAAAACTCAAGGGAAATAATACATATTGATGACATAAGAAATAATACTCAAAGTAAAAGTCCTAATTGCACTCACATTCATTGTATTCTGTTCTTCTATATATATAAATAGTTATTGAAAATTAAGCAAAGATAAGTGTAGTTGGAGGTATAGAAAGTCAAAAGTATTATTCTAATACTAATGTGTAAACGATTTTTTTTAATGGTATTTATTACATTAATGATGTTATATTTTGTAAAAATTAAAAAAAGAGAGAGAATTTATACACATTTTTTTTTCTATTTATATGAAGGCTTTTTTTTTTTTTTTTTTTTTAAAAAAAAATTTATGGCGTGTAATAATGATTAATAATGAGATTTTGTTAATGCAGAGGGAGGTGGGTGAAGAGGAGGCAGCGACGGAAGTGGAGGGTGGTGGAACGACGGAGGAGGATGAAGATGGAGAAACGACATGTGGTAATGGAACTTTAAGGACGTTGGAGTTGTTTCCGGTGAGAGCAAGTTGGGTGAAGGAGGAAGAAGGGACGAGTGGAAACGGTGGATGGGGAAATTAA

mRNA sequence

ATGTCTCCATCAAGTATTACTCCTTCAAGATGGTGTCCAACACCAGAACAAGTGATGATTTTGGAAGAGATTTATAGAAATGGGCTTAAAACTCCTAACGCCACTCAAATTCAACATATTACTTCTCATCTTTCTTTCTATGGTAAAATTGAAGGCAAAAATGTTTTCTATTGGTTCCAAAATCACAAGGCTAGAGATCGCCAAAAGCTTAGGAGGAAACTCTATAAGCAGCTTCAACAACATCATTTCTTTATGAAACGACAACGTTTTGATGATCATCATCATGACCATCATCACTTCTTTCAATATTTCCTTCCTCACCATGTTCCCCAACTACTCCCACAGCTTCCTTCTCCCTCTTCTCTTCAGAGGGAGGTGGGTGAAGAGGAGGCAGCGACGGAAGTGGAGGGTGGTGGAACGACGGAGGAGGATGAAGATGGAGAAACGACATGTGGTAATGGAACTTTAAGGACGTTGGAGTTGTTTCCGGTGAGAGCAAGTTGGGTGAAGGAGGAAGAAGGGACGAGTGGAAACGGTGGATGGGGAAATTAA

Coding sequence (CDS)

ATGTCTCCATCAAGTATTACTCCTTCAAGATGGTGTCCAACACCAGAACAAGTGATGATTTTGGAAGAGATTTATAGAAATGGGCTTAAAACTCCTAACGCCACTCAAATTCAACATATTACTTCTCATCTTTCTTTCTATGGTAAAATTGAAGGCAAAAATGTTTTCTATTGGTTCCAAAATCACAAGGCTAGAGATCGCCAAAAGCTTAGGAGGAAACTCTATAAGCAGCTTCAACAACATCATTTCTTTATGAAACGACAACGTTTTGATGATCATCATCATGACCATCATCACTTCTTTCAATATTTCCTTCCTCACCATGTTCCCCAACTACTCCCACAGCTTCCTTCTCCCTCTTCTCTTCAGAGGGAGGTGGGTGAAGAGGAGGCAGCGACGGAAGTGGAGGGTGGTGGAACGACGGAGGAGGATGAAGATGGAGAAACGACATGTGGTAATGGAACTTTAAGGACGTTGGAGTTGTTTCCGGTGAGAGCAAGTTGGGTGAAGGAGGAAGAAGGGACGAGTGGAAACGGTGGATGGGGAAATTAA

Protein sequence

MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHHHDHHHFFQYFLPHHVPQLLPQLPSPSSLQREVGEEEAATEVEGGGTTEEDEDGETTCGNGTLRTLELFPVRASWVKEEEGTSGNGGWGN*

Homology

[Close]

BLAST of Chy11G198330 vs. ExPASy Swiss-Prot
Match: Q9SIB4 (WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.4e-29
Identity = 71/127 (55.91%), Postives = 87/127 (68.50%), Query Frame = 0


Query: 4   SSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHK 63
           S +  +RWCPTPEQ+MILEE+YR+G++TPNA QIQ IT+HL+FYG+IEGKNVFYWFQNHK
Sbjct: 2   SPVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHK 61

Query: 64  ARDRQKLRRKLYKQL--QQHHFFMKRQRFD-----------------DHHHD-HHHFFQY 111
           ARDRQKLR+KL KQL  QQH   ++ Q+                   DHH+  HHH   +
Sbjct: 62  ARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMISQPVNKNIIDHHNPYHHHHHNH 121

[Close]

BLAST of Chy11G198330 vs. ExPASy Swiss-Prot
Match: Q5W7C3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 5.1e-27
Identity = 70/114 (61.40%), Postives = 79/114 (69.30%), Query Frame = 0


Query: 9   SRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQ 68
           +RWCPTPEQ+M+LEE+YR GL+TPNA QIQ IT+HLS YG+IEGKNVFYWFQNHKARDRQ
Sbjct: 26  TRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQ 85

Query: 69  KLRRKLYKQLQQHHFFMKRQRFDDHHHDHHHFFQYFLPHHVPQLLPQL-PSPSS 122
           KLRR+L      HH           H+ HHH          PQLLP L PS SS
Sbjct: 86  KLRRRL---CISHHL------LSCAHYYHHHLAAAAAVVPPPQLLPPLHPSSSS 130

[Close]

BLAST of Chy11G198330 vs. ExPASy Swiss-Prot
Match: Q70UV1 (WUSCHEL-related homeobox 3A OS=Zea mays OX=4577 GN=WOX3A PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.5e-26
Identity = 55/77 (71.43%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 7  TPS-RWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKAR 66
          TPS RWCPTPEQ+MILEE+YR+G++TPNA +IQ IT+HL++YG+IEGKNVFYWFQNHKAR
Sbjct: 4  TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKAR 63

Query: 67 DRQKLRRKLYKQLQQHH 83
          +RQ+LRR+L  + QQ +
Sbjct: 64 ERQRLRRRLCARHQQQY 80

[Close]

BLAST of Chy11G198330 vs. ExPASy Swiss-Prot
Match: Q6S3I3 (WUSCHEL-related homeobox 3B OS=Zea mays OX=4577 GN=WOX3B PE=2 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 3.3e-26
Identity = 56/83 (67.47%), Postives = 73/83 (87.95%), Query Frame = 0


Query: 7  TPS-RWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKAR 66
          TPS RWCPTPEQ+MILEE+YR+G++TPNA +IQ IT+HL++YG+IEGKNVFYWFQNHKAR
Sbjct: 4  TPSTRWCPTPEQLMILEEMYRSGVRTPNAAEIQQITAHLAYYGRIEGKNVFYWFQNHKAR 63

Query: 67 DRQKLRRKLYKQLQQHHFFMKRQ 89
          +RQ+LRR+L  + QQ +   ++Q
Sbjct: 64 ERQRLRRRLCARHQQQYAQQQQQ 86

[Close]

BLAST of Chy11G198330 vs. ExPASy Swiss-Prot
Match: A2XZR3 (Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WOX2 PE=3 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-24
Identity = 70/128 (54.69%), Postives = 81/128 (63.28%), Query Frame = 0


Query: 9   SRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQ 68
           +RWCPTPEQ+M+LEE+YR GL+TPNA QIQ IT+HLS YG+IEGKNVFYWFQNHKARDRQ
Sbjct: 26  TRWCPTPEQLMMLEEMYRGGLRTPNAAQIQQITAHLSTYGRIEGKNVFYWFQNHKARDRQ 85

Query: 69  KLRRKLYKQLQQHHFFMKRQRFDDHHHDHHHFFQYFLPHHVPQLLPQL-PSPSSLQREVG 128
           KLRR+L      HH           H+ HHH           +LL  L PS SS     G
Sbjct: 86  KLRRRL---CISHHL------LSCAHYYHHHLAAAAAVVPTTKLLTTLNPSSSSSSCGGG 144

Query: 129 EEEAATEV 136
             E A  +
Sbjct: 146 LNEDANSL 144

[Close]

BLAST of Chy11G198330 vs. ExPASy TrEMBL
Match: A0A0A0KHT6 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301060 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.3e-96
Identity = 180/193 (93.26%), Postives = 181/193 (93.78%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHHHDHHHFFQYFLPHHVPQLLPQLPSPS 120
           NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDH HDHHHFFQYFLPHHVPQLLPQLPSPS
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHQHDHHHFFQYFLPHHVPQLLPQLPSPS 120

Query: 121 SLQREVGEEEAATEVEGG----------GTTEEDEDGETTCGNGTLRTLELFPVRASWVK 180
           SLQREVGEEEAATEVEGG          GTT E+EDGETTCGNGTLRTLELFPVRASWVK
Sbjct: 121 SLQREVGEEEAATEVEGGGGRRWMGGDEGTTVEEEDGETTCGNGTLRTLELFPVRASWVK 180

Query: 181 EEEGTSGNGGWGN 184
           EEEGTSGNGGWGN
Sbjct: 181 EEEGTSGNGGWGN 193

[Close]

BLAST of Chy11G198330 vs. ExPASy TrEMBL
Match: A0A1S3CK69 (WUSCHEL-related homeobox 3 OS=Cucumis melo OX=3656 GN=LOC103501892 PE=3 SV=1)

HSP 1 Score: 346.3 bits (887), Expect = 8.0e-92
Identity = 175/193 (90.67%), Postives = 178/193 (92.23%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHHHDHHHFFQYFLPHHVPQLLPQLPSPS 120
           NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDD  HDHHHFFQYFLPHHVPQLLPQLPSPS
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDD-DHDHHHFFQYFLPHHVPQLLPQLPSPS 120

Query: 121 SLQREVGEEEAATEVEGG----------GTTEEDEDGETTCGNGTLRTLELFPVRASWVK 180
           SLQRE+GEEEAATEVEGG          GTT  +EDGETTCGNG+LRTLELFPVR SWVK
Sbjct: 121 SLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVK 180

Query: 181 EEEGTSGNGGWGN 184
           EEEGTSGNGGWGN
Sbjct: 181 EEEGTSGNGGWGN 192

[Close]

BLAST of Chy11G198330 vs. ExPASy TrEMBL
Match: A0A6J1FXP0 (putative WUSCHEL-related homeobox 2 OS=Cucurbita moschata OX=3662 GN=LOC111448632 PE=3 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 6.6e-70
Identity = 147/190 (77.37%), Postives = 152/190 (80.00%), Query Frame = 0


Query: 1   MSP----SSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVF 60
           MSP    ++ TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLS YGKIEGKNVF
Sbjct: 1   MSPAAAAAAATPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVF 60

Query: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHHHDHHHFFQYFLPHHVPQLLPQL 120
           YWFQNHKARDRQKLRRKLYKQLQQHHFF+KRQRFDD     HHFF  FL HH   L P L
Sbjct: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFFIKRQRFDD-----HHFFHCFLQHHQRFLPPLL 120

Query: 121 PSPSSLQREVGEEEAATEVEGG---GTTEEDEDGETTCGNGTLRTLELFPVRASWVKEEE 180
           P P+  Q E G E   TEVEGG   G    +ED ETTCGNGTLRTLELFPVRA WVKEEE
Sbjct: 121 PLPTHFQGE-GGEGRTTEVEGGGDDGMAVGEEDAETTCGNGTLRTLELFPVRAGWVKEEE 180

Query: 181 GTSGNGGWGN 184
           G SGNGGWGN
Sbjct: 181 GGSGNGGWGN 184

[Close]

BLAST of Chy11G198330 vs. ExPASy TrEMBL
Match: A0A6P6FR94 (WUSCHEL-related homeobox 3-like OS=Ziziphus jujuba OX=326968 GN=LOC107404843 PE=3 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 3.4e-34
Identity = 86/137 (62.77%), Postives = 97/137 (70.80%), Query Frame = 0


Query: 2   SPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQN 61
           SPSS T SRWCPTPEQ+MILEE+YR G +TPNA+QIQ IT+HLSFYGKIEGKNVFYWFQN
Sbjct: 9   SPSSSTSSRWCPTPEQLMILEEMYRAGTRTPNASQIQQITAHLSFYGKIEGKNVFYWFQN 68

Query: 62  HKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHHHDHHHFFQYFLPHHVPQLLPQLP---S 121
           HKARDRQKLRRK+YKQLQQ            HHH +HHF  Y      P    QL    S
Sbjct: 69  HKARDRQKLRRKIYKQLQQQQLL--------HHHQNHHFLGYSESPSAPAAFQQLACYNS 128

Query: 122 PSSLQREVGEEEAATEV 136
           P S   +VG EEA+ ++
Sbjct: 129 PVSHIPQVGVEEASPQL 137

[Close]

BLAST of Chy11G198330 vs. ExPASy TrEMBL
Match: A0A5D2ZWI0 (Homeobox domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A03G049700v1 PE=3 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 2.4e-32
Identity = 101/207 (48.79%), Postives = 117/207 (56.52%), Query Frame = 0


Query: 9   SRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQ 68
           SRWCPTPEQVMILEE+YR+G+KTPNATQIQ ITSHLSFYGKIEGKNVFYWFQNHKAR+RQ
Sbjct: 7   SRWCPTPEQVMILEEMYRSGVKTPNATQIQQITSHLSFYGKIEGKNVFYWFQNHKARERQ 66

Query: 69  KLRRKLYKQLQQHHFFMKRQRFDDHHHDHHHFFQYFLPHHVPQLLPQLPSPSSLQREVGE 128
           KLRRKL KQLQ      ++Q F       HH+F   LP    Q L    SP    ++VG 
Sbjct: 67  KLRRKLSKQLQ----LQQQQLF-------HHYFD-SLPSPPFQHLSYYNSPPPFPQQVGV 126

Query: 129 EEAATEVEGG--------GTTEEDEDGE----------------------------TTCG 180
           ++AA   + G         +   D D                              TT G
Sbjct: 127 DDAAAAAKQGMNYTWKLDVSERMDVDKSMMKIYGGDLLMMVDLSSPSLSSPCFFTTTTTG 186

[Close]

BLAST of Chy11G198330 vs. NCBI nr
Match: XP_004148244.1 (WUSCHEL-related homeobox 3 [Cucumis sativus] >KGN47336.1 hypothetical protein Csa_022936 [Cucumis sativus])

HSP 1 Score: 358 bits (918), Expect = 3.11e-124
Identity = 180/193 (93.26%), Postives = 181/193 (93.78%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHHHDHHHFFQYFLPHHVPQLLPQLPSPS 120
           NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDH HDHHHFFQYFLPHHVPQLLPQLPSPS
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHQHDHHHFFQYFLPHHVPQLLPQLPSPS 120

Query: 121 SLQREVGEEEAATEVEGGG----------TTEEDEDGETTCGNGTLRTLELFPVRASWVK 180
           SLQREVGEEEAATEVEGGG          TT E+EDGETTCGNGTLRTLELFPVRASWVK
Sbjct: 121 SLQREVGEEEAATEVEGGGGRRWMGGDEGTTVEEEDGETTCGNGTLRTLELFPVRASWVK 180

Query: 181 EEEGTSGNGGWGN 183
           EEEGTSGNGGWGN
Sbjct: 181 EEEGTSGNGGWGN 193

[Close]

BLAST of Chy11G198330 vs. NCBI nr
Match: XP_008463857.1 (PREDICTED: WUSCHEL-related homeobox 3 [Cucumis melo])

HSP 1 Score: 344 bits (882), Expect = 9.25e-119
Identity = 175/193 (90.67%), Postives = 178/193 (92.23%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHHHDHHHFFQYFLPHHVPQLLPQLPSPS 120
           NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDD H DHHHFFQYFLPHHVPQLLPQLPSPS
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDDH-DHHHFFQYFLPHHVPQLLPQLPSPS 120

Query: 121 SLQREVGEEEAATEVEGGG----------TTEEDEDGETTCGNGTLRTLELFPVRASWVK 180
           SLQRE+GEEEAATEVEGGG          TT  +EDGETTCGNG+LRTLELFPVR SWVK
Sbjct: 121 SLQRELGEEEAATEVEGGGGRRWLGGDDGTTVAEEDGETTCGNGSLRTLELFPVRGSWVK 180

Query: 181 EEEGTSGNGGWGN 183
           EEEGTSGNGGWGN
Sbjct: 181 EEEGTSGNGGWGN 192

[Close]

BLAST of Chy11G198330 vs. NCBI nr
Match: XP_038902731.1 (WUSCHEL-related homeobox 3-like [Benincasa hispida])

HSP 1 Score: 291 bits (746), Expect = 3.86e-98
Identity = 158/192 (82.29%), Postives = 162/192 (84.38%), Query Frame = 0


Query: 1   MSPSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60
           MSPS ITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ
Sbjct: 1   MSPSGITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQ 60

Query: 61  NHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHHHDHHHFFQYFLPHHVPQLLPQLPSPS 120
           NHKARDRQKLRRKLYKQLQQHHF MKR RFD+H      FF YFLP HVPQLLP  PSPS
Sbjct: 61  NHKARDRQKLRRKLYKQLQQHHFLMKRHRFDEHTQ----FFHYFLPQHVPQLLP-FPSPS 120

Query: 121 SLQREVGEEEAATEVEGG---------GTTEEDEDGETTCGNGTLRTLELFPVRASWVKE 180
             Q+E GEEE ATEVEGG         GTT  +EDGETTC NGTLRTLELFPVRASW+KE
Sbjct: 121 H-QKE-GEEEPATEVEGGRTTWFGGDEGTTVAEEDGETTCRNGTLRTLELFPVRASWMKE 180

Query: 181 EEGTSGNGGWGN 183
           EEGTSGNGGW N
Sbjct: 181 EEGTSGNGGWMN 185

[Close]

BLAST of Chy11G198330 vs. NCBI nr
Match: XP_022944088.1 (putative WUSCHEL-related homeobox 2 [Cucurbita moschata])

HSP 1 Score: 271 bits (693), Expect = 4.41e-90
Identity = 147/190 (77.37%), Postives = 152/190 (80.00%), Query Frame = 0


Query: 1   MSPSSI----TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVF 60
           MSP++     TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLS YGKIEGKNVF
Sbjct: 1   MSPAAAAAAATPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVF 60

Query: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHHHDHHHFFQYFLPHHVPQLLPQL 120
           YWFQNHKARDRQKLRRKLYKQLQQHHFF+KRQRFDDHH     FF  FL HH   L P L
Sbjct: 61  YWFQNHKARDRQKLRRKLYKQLQQHHFFIKRQRFDDHH-----FFHCFLQHHQRFLPPLL 120

Query: 121 PSPSSLQREVGEEEAATEVEGGGT---TEEDEDGETTCGNGTLRTLELFPVRASWVKEEE 180
           P P+  Q E GE    TEVEGGG       +ED ETTCGNGTLRTLELFPVRA WVKEEE
Sbjct: 121 PLPTHFQGEGGEGRT-TEVEGGGDDGMAVGEEDAETTCGNGTLRTLELFPVRAGWVKEEE 180

Query: 181 GTSGNGGWGN 183
           G SGNGGWGN
Sbjct: 181 GGSGNGGWGN 184

[Close]

BLAST of Chy11G198330 vs. NCBI nr
Match: KAG6570743.1 (WUSCHEL-related homeobox 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 256 bits (655), Expect = 2.88e-84
Identity = 143/197 (72.59%), Postives = 148/197 (75.13%), Query Frame = 0


Query: 1   MSPSSI---TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFY 60
           MSP++    TPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLS YGKIEGKNVFY
Sbjct: 1   MSPAAAAAATPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSLYGKIEGKNVFY 60

Query: 61  WFQNHKARDRQKLRRKLYKQLQQHHFFMKRQRFDDHH--------HDHHHFFQYFLPHHV 120
           WFQNHKARDRQKLRRKLYKQLQQHHFF+KRQRFDDHH          HHH  Q F P   
Sbjct: 61  WFQNHKARDRQKLRRKLYKQLQQHHFFIKRQRFDDHHFFHCFLQQQQHHHHHQRFPP--- 120

Query: 121 PQLLPQLPSPSSLQREVGEEEAATEVEGGGT---TEEDEDGETTCGNGTLRTLELFPVRA 180
               P LP P+  Q E       TEVEGGG       +ED ETTC NGTLRTLELFPVRA
Sbjct: 121 ----PLLPLPTHFQGEG----RTTEVEGGGDDGMAVGEEDAETTCRNGTLRTLELFPVRA 180

Query: 181 SWVKEEEGTSGNGGWGN 183
            WVKEEEG SGNGGWGN
Sbjct: 181 GWVKEEEGGSGNGGWGN 186

[Close]

BLAST of Chy11G198330 vs. TAIR 10
Match: AT2G28610.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 130.2 bits (326), Expect = 1.7e-30
Identity = 71/127 (55.91%), Postives = 87/127 (68.50%), Query Frame = 0


Query: 4   SSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHK 63
           S +  +RWCPTPEQ+MILEE+YR+G++TPNA QIQ IT+HL+FYG+IEGKNVFYWFQNHK
Sbjct: 2   SPVASTRWCPTPEQLMILEEMYRSGIRTPNAVQIQQITAHLAFYGRIEGKNVFYWFQNHK 61

Query: 64  ARDRQKLRRKLYKQL--QQHHFFMKRQRFD-----------------DHHHD-HHHFFQY 111
           ARDRQKLR+KL KQL  QQH   ++ Q+                   DHH+  HHH   +
Sbjct: 62  ARDRQKLRKKLAKQLHQQQHQLQLQLQQIKPKPISSMISQPVNKNIIDHHNPYHHHHHNH 121

[Close]

BLAST of Chy11G198330 vs. TAIR 10
Match: AT3G18010.1 (WUSCHEL related homeobox 1 )

HSP 1 Score: 102.1 bits (253), Expect = 5.0e-22
Identity = 46/72 (63.89%), Postives = 57/72 (79.17%), Query Frame = 0


Query: 3   PSSITPSRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNH 62
           P  +  SRW PTP+Q+ +LEE+YR G +TP+A  IQ IT+ L  YGKIEGKNVFYWFQNH
Sbjct: 69  PPVMVSSRWNPTPDQLRVLEELYRQGTRTPSADHIQQITAQLRRYGKIEGKNVFYWFQNH 128

Query: 63  KARDRQKLRRKL 75
           KAR+RQK RR++
Sbjct: 129 KARERQKRRRQM 140

[Close]

BLAST of Chy11G198330 vs. TAIR 10
Match: AT1G46480.1 (WUSCHEL related homeobox 4 )

HSP 1 Score: 98.6 bits (244), Expect = 5.6e-21
Identity = 44/64 (68.75%), Postives = 53/64 (82.81%), Query Frame = 0


Query: 9   SRWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQ 68
           +RW PT EQ+ ILE +Y+ G++TPNA QI+HIT  L  YGKIEGKNVFYWFQNHKAR+RQ
Sbjct: 89  TRWNPTQEQIGILEMLYKGGMRTPNAQQIEHITLQLGKYGKIEGKNVFYWFQNHKARERQ 148

Query: 69  KLRR 73
           K +R
Sbjct: 149 KQKR 152

[Close]

BLAST of Chy11G198330 vs. TAIR 10
Match: AT3G11260.1 (WUSCHEL related homeobox 5 )

HSP 1 Score: 93.6 bits (231), Expect = 1.8e-19
Identity = 46/73 (63.01%), Postives = 55/73 (75.34%), Query Frame = 0


Query: 10 RWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQK 69
          RW PT EQ+ IL +++R GL+TP   QIQ I++ LSFYGKIE KNVFYWFQNHKAR+RQK
Sbjct: 24 RWNPTVEQLKILTDLFRAGLRTPTTDQIQKISTELSFYGKIESKNVFYWFQNHKARERQK 83

Query: 70 LRRKLYKQLQQHH 83
           RRK+      HH
Sbjct: 84 -RRKISIDFDHHH 95

[Close]

BLAST of Chy11G198330 vs. TAIR 10
Match: AT5G05770.1 (WUSCHEL related homeobox 7 )

HSP 1 Score: 92.0 bits (227), Expect = 5.2e-19
Identity = 41/63 (65.08%), Postives = 51/63 (80.95%), Query Frame = 0


Query: 10 RWCPTPEQVMILEEIYRNGLKTPNATQIQHITSHLSFYGKIEGKNVFYWFQNHKARDRQK 69
          RW PT EQV +L ++++ GL+TP+  QIQ I+  LSFYGKIE KNVFYWFQNHKAR+RQK
Sbjct: 29 RWNPTVEQVKLLTDLFKAGLRTPSTDQIQKISMELSFYGKIESKNVFYWFQNHKARERQK 88

Query: 70 LRR 73
           R+
Sbjct: 89 CRK 91

The following BLAST results are available for this feature:

BLAST of Chy11G198330 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SIB4	2.4e-29	55.91	WUSCHEL-related homeobox 3 OS=Arabidopsis thaliana OX=3702 GN=WOX3 PE=1 SV=1	[more]
Q5W7C3	5.1e-27	61.40	Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]
Q70UV1	2.5e-26	71.43	WUSCHEL-related homeobox 3A OS=Zea mays OX=4577 GN=WOX3A PE=2 SV=1	[more]
Q6S3I3	3.3e-26	67.47	WUSCHEL-related homeobox 3B OS=Zea mays OX=4577 GN=WOX3B PE=2 SV=1	[more]
A2XZR3	1.4e-24	54.69	Putative WUSCHEL-related homeobox 2 OS=Oryza sativa subsp. indica OX=39946 GN=WO...	[more]

BLAST of Chy11G198330 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHT6	5.3e-96	93.26	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301060 PE...	[more]
A0A1S3CK69	8.0e-92	90.67	WUSCHEL-related homeobox 3 OS=Cucumis melo OX=3656 GN=LOC103501892 PE=3 SV=1	[more]
A0A6J1FXP0	6.6e-70	77.37	putative WUSCHEL-related homeobox 2 OS=Cucurbita moschata OX=3662 GN=LOC11144863...	[more]
A0A6P6FR94	3.4e-34	62.77	WUSCHEL-related homeobox 3-like OS=Ziziphus jujuba OX=326968 GN=LOC107404843 PE=...	[more]
A0A5D2ZWI0	2.4e-32	48.79	Homeobox domain-containing protein OS=Gossypium mustelinum OX=34275 GN=E1A91_A03...	[more]

BLAST of Chy11G198330 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148244.1	3.11e-124	93.26	WUSCHEL-related homeobox 3 [Cucumis sativus] >KGN47336.1 hypothetical protein Cs...	[more]
XP_008463857.1	9.25e-119	90.67	PREDICTED: WUSCHEL-related homeobox 3 [Cucumis melo]	[more]
XP_038902731.1	3.86e-98	82.29	WUSCHEL-related homeobox 3-like [Benincasa hispida]	[more]
XP_022944088.1	4.41e-90	77.37	putative WUSCHEL-related homeobox 2 [Cucurbita moschata]	[more]
KAG6570743.1	2.88e-84	72.59	WUSCHEL-related homeobox 3, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of Chy11G198330 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28610.1	1.7e-30	55.91	Homeodomain-like superfamily protein	[more]
AT3G18010.1	5.0e-22	63.89	WUSCHEL related homeobox 1	[more]
AT1G46480.1	5.6e-21	68.75	WUSCHEL related homeobox 4	[more]
AT3G11260.1	1.8e-19	63.01	WUSCHEL related homeobox 5	[more]
AT5G05770.1	5.2e-19	65.08	WUSCHEL related homeobox 7	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 6..73 e-value: 4.6E-4 score: 27.5
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 9..68 e-value: 2.0E-17 score: 62.8
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 4..69 score: 9.620432
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 10..69 e-value: 3.56594E-4 score: 35.2969
None	No IPR available	GENE3D	1.10.10.60		coord: 10..82 e-value: 8.8E-9 score: 36.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 135..149
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 116..158
None	No IPR available	PANTHER	PTHR45940:SF24	WUSCHEL-RELATED HOMEOBOX 3	coord: 1..132
IPR044555	Protein WUSCHEL-like	PANTHER	PTHR45940	WUSCHEL-RELATED HOMEOBOX 1-RELATED	coord: 1..132
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 9..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G198330.1	Chy11G198330.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0099402	plant organ development
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity