Chy11G197580 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G197580
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	NAD(P)H-quinone oxidoreductase subunit N
Location	chrH11: 17917542 .. 17919697 (+)
RNA-Seq Expression	Chy11G197580
Synteny	Chy11G197580

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCCCTCTAGCCTCCATGTTCAACGGAGCACCCCTAGCTCCACCGCTCCACCTTCACTCAAGTCGCCACCACGCACTCACCTCGCCCACGATGCTGCCGATTAACAATCGCCGGTCGAGTTTCCGCCCCGGCAATGGCAGAGCCGAGACGGTCAGATGCGAGGGAATCGGAATTGGCGATTTCATCGGTGGCGATTTGCTTAAATTTGACCTAGGGCAATGGTTATCGGATGTGGAGGAACACAAAGCTTTAGCAATTTACTCGCCGCATGAAGGCGGATACGAAGGCCGATACCTAAATCGCCTCCGTTACCAAGGCTATTACTTCCTCGATCTGTCCGCTCGCGGTCTCGGCGACCCTGAGACCACTCTCACCAAGATTCATCCTGTTTGCCCTGTCTGTTGAATGGAATCCTTACAGCTGATTCACTTTGATTAGTTTTTTTTTTTTTTTGAGGGTTTGTTCGATTGTTGTTCTTACTTTGGGGTTCGAATTGCAGGCTCATTTGGGGAAGCAGCCTATTGCACGGTGGTATTTTCCGCCGGAAGTTGATTACAGGCTGGCGGCGCTGCCTCCGAACGCTAAGGGACTGGTCGTGTGGATAATCGAGGCTAAGGTGAGATTATTTGAACTGCCATTAGATTAACGATTCAGAAAGAGGTAGTTTGAGAAAAAAAAAAAGGATTACCGAATTGGAAACATTGATCAGGTTCTTTCCAAGGCGGAGTTGCAATTCCTTGCTTTGCTTCCGACTCTCCGGCCGAAAGTCCGAGTCATTGCCGAGTGCGGGAATTGGTACGTTTCTTTGTTGGTCTCATTGTCCACTTGGGAATGAAGTGAAGTTCAATGTGCAATGCATAGTTTTATAAATTTGGTTCAAAGTTAGAAAATTACCATTTTTTTTCTTCCTTTTTTCCCAATTCTTTAGTTGGTCAATAGGAAGTATTTTCAAACAATAGACGTAGAAATGTTGCAAATATTTAAAAAATATATAGATTTTCAATATCAATATCAATAGTTATGAAATTTTATTATATTTTGTTTTATTTTTATTATATTTGAAAATGCTTTTGTCTAATTTTAATCTTTCATAAATATTTTTGAAAACTTTGATTTAGAAAATCAAATTTTAACGGAAGTTGGGAGACAAATCACAAACTTCAAGATTTCAATTTTAGACCAATATTTTGAAATGGAAAGTTGATGGTATATTTAGAAACTTAGCCTTCTTTTTGTTTGAAATTGAGGAATGATTGGTGTGAGATAACTATGGGGATGAACAAGATGCAGATTTCTAATAGCACATTCGAGGCAAGAAGTTGGTTATTATAATTATAGGTTATTAGAGTTGGGTTATGATAGTTTGTGTTTAGAGGTGTAGATTATTATATAGATCATAATAATTTGTGTTTGAGGTATAAACTATTTTAGTTTGAGAAGAAAATAAAGAAGAAAATAGTAAAAAATAGTAGTAAAAAAGTACCCAATAATAAATAATATAGCAAATGAGAAGTTTTGAAATAATATTAAATATAGTTAATTAAGAATTACAAAATAGTATTTACTATAACAAAGGATGATTGCTATAATGTTTAACAATCATTTACCCAAACATCTCATAAATGTTTATAAACACTTAAAAAAATAAACATAGATCAATAACGATCAACGTGTACTAATATGTATTCCTCCTTTCAAAGTTTGAGAGTTAAAATCTTAACCATCATTATTTTAAGAAGAGAGAAAAATGGGGGTGGAGTAGGTGTTTAGTTTTTGCCTATGTTGATTTGCGAAATGATTTGAATATTGGGTATTAAGATTTGTAACGGTCCTTAATCAGGAGGGTGGTGATTTTGAAAGAAGGAAAAACCTTTGGAAAAAATTCTTAATTGAAAAGCAAACAAAAAAATTCATTTGAAATCATTATACGAGGTCTTCTCATCTTTTTAGTTTTTTTTTGGATCCTCAACATATTAACATATTATTTTAAAACAATACTTCCTTAGGTTTGCCATTCATGCACTCAGGTATGTTATAAGATTATAAGGTTTTTTAAAACTTTCTAACATGAGATACTTAAATGGGAAGATTGACTTTATTTTTGTAGGAGAAAGTTCATGTGGAAACCGCTCAAGGAGATCGCAGGAGCTTGA

mRNA sequence

ATGGCCCCTCTAGCCTCCATGTTCAACGGAGCACCCCTAGCTCCACCGCTCCACCTTCACTCAAGTCGCCACCACGCACTCACCTCGCCCACGATGCTGCCGATTAACAATCGCCGGTCGAGTTTCCGCCCCGGCAATGGCAGAGCCGAGACGGTCAGATGCGAGGGAATCGGAATTGGCGATTTCATCGGTGGCGATTTGCTTAAATTTGACCTAGGGCAATGGTTATCGGATGTGGAGGAACACAAAGCTTTAGCAATTTACTCGCCGCATGAAGGCGGATACGAAGGCCGATACCTAAATCGCCTCCGTTACCAAGGCTATTACTTCCTCGATCTGTCCGCTCGCGGTCTCGGCGACCCTGAGACCACTCTCACCAAGATTCATCCTGTTTGCCCTGCTCATTTGGGGAAGCAGCCTATTGCACGGTGGTATTTTCCGCCGGAAGTTGATTACAGGCTGGCGGCGCTGCCTCCGAACGCTAAGGGACTGGTCGTGTGGATAATCGAGGCTAAGGTTCTTTCCAAGGCGGAGTTGCAATTCCTTGCTTTGCTTCCGACTCTCCGGCCGAAAGTCCGAGTCATTGCCGAGTGCGGGAATTGGAGAAAGTTCATGTGGAAACCGCTCAAGGAGATCGCAGGAGCTTGA

Coding sequence (CDS)

ATGGCCCCTCTAGCCTCCATGTTCAACGGAGCACCCCTAGCTCCACCGCTCCACCTTCACTCAAGTCGCCACCACGCACTCACCTCGCCCACGATGCTGCCGATTAACAATCGCCGGTCGAGTTTCCGCCCCGGCAATGGCAGAGCCGAGACGGTCAGATGCGAGGGAATCGGAATTGGCGATTTCATCGGTGGCGATTTGCTTAAATTTGACCTAGGGCAATGGTTATCGGATGTGGAGGAACACAAAGCTTTAGCAATTTACTCGCCGCATGAAGGCGGATACGAAGGCCGATACCTAAATCGCCTCCGTTACCAAGGCTATTACTTCCTCGATCTGTCCGCTCGCGGTCTCGGCGACCCTGAGACCACTCTCACCAAGATTCATCCTGTTTGCCCTGCTCATTTGGGGAAGCAGCCTATTGCACGGTGGTATTTTCCGCCGGAAGTTGATTACAGGCTGGCGGCGCTGCCTCCGAACGCTAAGGGACTGGTCGTGTGGATAATCGAGGCTAAGGTTCTTTCCAAGGCGGAGTTGCAATTCCTTGCTTTGCTTCCGACTCTCCGGCCGAAAGTCCGAGTCATTGCCGAGTGCGGGAATTGGAGAAAGTTCATGTGGAAACCGCTCAAGGAGATCGCAGGAGCTTGA

Protein sequence

MAPLASMFNGAPLAPPLHLHSSRHHALTSPTMLPINNRRSSFRPGNGRAETVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA*

Homology

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BLAST of Chy11G197580 vs. ExPASy Swiss-Prot
Match: Q9LVM2 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhN PE=2 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 3.9e-79
Identity = 139/177 (78.53%), Postives = 155/177 (87.57%), Query Frame = 0


Query: 37  NRRSSFRPGNGRAETVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYE 96
           N RS  R   G    V+C    I D+IGGDL+K D+GQWL DVEEHKA+AIY+PHEGGYE
Sbjct: 33  NTRSKRRRSTG----VKCS--SIADYIGGDLVKPDIGQWLQDVEEHKAIAIYAPHEGGYE 92

Query: 97  GRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAA 156
           GRYLNRL+ QGYYFLD+SARGLGDPETTL K +PVCPAHLGKQPIARWY+PPEVDYRLAA
Sbjct: 93  GRYLNRLKMQGYYFLDISARGLGDPETTLLKNYPVCPAHLGKQPIARWYYPPEVDYRLAA 152

Query: 157 LPPNAKGLVVWIIEAKVLSKAELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIA 214
           LPP+AKGLVVW++EAKVLSK+ELQFLALLP+LRP VRVIAECGNWRKF+WKPL EIA
Sbjct: 153 LPPSAKGLVVWVLEAKVLSKSELQFLALLPSLRPNVRVIAECGNWRKFVWKPLAEIA 203

[Close]

BLAST of Chy11G197580 vs. ExPASy Swiss-Prot
Match: B8HUU1 (NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=ndhN PE=3 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 2.7e-35
Identity = 72/149 (48.32%), Postives = 99/149 (66.44%), Query Frame = 0


Query: 74  QWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCP 133
           Q++ D+E+  AL IY P EGG+EGRY  RLR  GY  L +SA GLGD  + LT++H V P
Sbjct: 9   QFIQDLEKSGALGIYVPSEGGFEGRYQRRLRAAGYSTLHISAPGLGDLPSYLTQVHGVRP 68

Query: 134 AHLGKQP-------IARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQFLALLP 193
            HLGK         +  ++ PP V+Y L  LPP A+GLV+W+I+ K LS+ EL +L++LP
Sbjct: 69  PHLGKSTQGNTDWGVKTFFLPPLVNYHLENLPPKARGLVLWMIDGKRLSRQELAYLSILP 128

Query: 194 TLRPKVRVIAECGNWRKFMWKPLKEIAGA 216
              PKV+++ E G  R+F W+PLKE+A A
Sbjct: 129 AQEPKVKIVIELGGDRQFRWQPLKEMAAA 157

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BLAST of Chy11G197580 vs. ExPASy Swiss-Prot
Match: B7JYJ3 (NAD(P)H-quinone oxidoreductase subunit N OS=Rippkaea orientalis (strain PCC 8801) OX=41431 GN=ndhN PE=3 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.9e-33
Identity = 68/141 (48.23%), Postives = 94/141 (66.67%), Query Frame = 0


Query: 79  VEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGK 138
           +E+  +LA+Y+P EGG+EGRY  RLR  GY+   L+ARGLGD    L  +H V P HLGK
Sbjct: 14  LEKSGSLAVYAPLEGGFEGRYQRRLRTNGYHTFSLTARGLGDVSAYLMGVHGVRPPHLGK 73

Query: 139 QPIAR-------WYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQFLALLPTLRPK 198
           + I +       ++ PP   Y+L  LPP +KGLV+WI+E  +LS+ EL++LA LPTL P+
Sbjct: 74  KNIGQEAAVGPVYFVPPIAAYQLETLPPKSKGLVLWILEGFILSQTELEYLANLPTLEPR 133

Query: 199 VRVIAECGNWRKFMWKPLKEI 213
           ++V+ E G  R F WKPL E+
Sbjct: 134 LKVVIELGGERYFSWKPLPEV 154

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BLAST of Chy11G197580 vs. ExPASy Swiss-Prot
Match: Q31L05 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=ndhN PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.2e-33
Identity = 74/149 (49.66%), Postives = 91/149 (61.07%), Query Frame = 0


Query: 74  QWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCP 133
           ++L  +E+  ALA+Y+P EGGYEGRYL RLR +GY  L  SARGLGDP   L  IH V P
Sbjct: 9   KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRP 68

Query: 134 AHLGKQPIAR-------WYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQFLALLP 193
            HLGKQ I          Y  P V Y L  LP NAKGLV+W++E  VLS  EL +   LP
Sbjct: 69  PHLGKQTIGNEAAVGRVEYVLPLVGYPLQNLPANAKGLVLWLLEGHVLSPQELSYFVTLP 128

Query: 194 TLRPKVRVIAECGNWRKFMWKPLKEIAGA 216
              P+++V+ E G  R F W+PL  +A A
Sbjct: 129 QAEPRLKVVIEMGGDRGFSWQPLAAVAEA 157

[Close]

BLAST of Chy11G197580 vs. ExPASy Swiss-Prot
Match: Q5N0W6 (NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) OX=269084 GN=ndhN PE=3 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 7.2e-33
Identity = 74/149 (49.66%), Postives = 91/149 (61.07%), Query Frame = 0


Query: 74  QWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCP 133
           ++L  +E+  ALA+Y+P EGGYEGRYL RLR +GY  L  SARGLGDP   L  IH V P
Sbjct: 9   KFLRALEQEGALAVYAPLEGGYEGRYLRRLRSKGYSALTYSARGLGDPAQFLMDIHGVRP 68

Query: 134 AHLGKQPIAR-------WYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQFLALLP 193
            HLGKQ I          Y  P V Y L  LP NAKGLV+W++E  VLS  EL +   LP
Sbjct: 69  PHLGKQTIGNEAAVGRVEYVLPLVGYPLQNLPANAKGLVLWLLEGHVLSPQELSYFVTLP 128

Query: 194 TLRPKVRVIAECGNWRKFMWKPLKEIAGA 216
              P+++V+ E G  R F W+PL  +A A
Sbjct: 129 QAEPRLKVVIEMGGDRGFSWQPLAAVAEA 157

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BLAST of Chy11G197580 vs. ExPASy TrEMBL
Match: A0A1S3C430 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103496258 PE=4 SV=1)

HSP 1 Score: 444.1 bits (1141), Expect = 3.3e-121
Identity = 210/215 (97.67%), Postives = 212/215 (98.60%), Query Frame = 0


Query: 1   MAPLASMFNGAPLAPPLHLHSSRHHALTSPTMLPINNRRSSFRPGNGRAETVRCEGIGIG 60
           MAP+ASMFNGAPLAPPLHLHSSRHH LTSP M+PINNRRSSFRPGNGRA TVRCEGIGIG
Sbjct: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 216
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 215

[Close]

BLAST of Chy11G197580 vs. ExPASy TrEMBL
Match: A0A0A0KEC3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133810 PE=4 SV=1)

HSP 1 Score: 442.6 bits (1137), Expect = 9.6e-121
Identity = 210/215 (97.67%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MAPLASMFNGAPLAPPLHLHSSRHHALTSPTMLPINNRRSSFRPGNGRAETVRCEGIGIG 60
           MAPLASMFNGAPLAPPLH HSSRHH LTSP MLPINNRRSS RPGNGRA TVRCEGIGIG
Sbjct: 1   MAPLASMFNGAPLAPPLHFHSSRHHPLTSPAMLPINNRRSSLRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 216
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 215

[Close]

BLAST of Chy11G197580 vs. ExPASy TrEMBL
Match: A0A5A7SWJ9 (NAD(P)H-quinone oxidoreductase subunit N OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00760 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 6.2e-112
Identity = 196/201 (97.51%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 1   MAPLASMFNGAPLAPPLHLHSSRHHALTSPTMLPINNRRSSFRPGNGRAETVRCEGIGIG 60
           MAP+ASMFNGAPLAPPLHLHSSRHH LTSP M+PINNRRSSFRPGNGRA TVRCEGIGIG
Sbjct: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNW 202
           FLALLPTLRPKVRVIAECGNW
Sbjct: 181 FLALLPTLRPKVRVIAECGNW 201

[Close]

BLAST of Chy11G197580 vs. ExPASy TrEMBL
Match: A0A6J1L763 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499786 PE=4 SV=1)

HSP 1 Score: 398.3 bits (1022), Expect = 2.1e-107
Identity = 192/214 (89.72%), Postives = 194/214 (90.65%), Query Frame = 0


Query: 1   MAPLASMFNGAPLAPPLHLHSSRHHALTSPTMLPINNRRSSFRPGNGRAETVRCEGIGIG 60
           M PLASM NGA LAP LHLH  R   LTSP  L +  RR+ F  G GRA TVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPLTSPATLQVIGRRTRFGTGKGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 215
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214

[Close]

BLAST of Chy11G197580 vs. ExPASy TrEMBL
Match: A0A6J1G6N3 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451247 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.5e-105
Identity = 190/214 (88.79%), Postives = 192/214 (89.72%), Query Frame = 0


Query: 1   MAPLASMFNGAPLAPPLHLHSSRHHALTSPTMLPINNRRSSFRPGNGRAETVRCEGIGIG 60
           M PLASM NGA LAP LHLH  R    TS   L +  RR+ F  G GRA TVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPPTSAATLQVIGRRTRFGTGKGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLDALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 215
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214

[Close]

BLAST of Chy11G197580 vs. NCBI nr
Match: XP_008456262.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis melo])

HSP 1 Score: 439 bits (1130), Expect = 1.19e-155
Identity = 210/215 (97.67%), Postives = 212/215 (98.60%), Query Frame = 0


Query: 1   MAPLASMFNGAPLAPPLHLHSSRHHALTSPTMLPINNRRSSFRPGNGRAETVRCEGIGIG 60
           MAP+ASMFNGAPLAPPLHLHSSRHH LTSP M+PINNRRSSFRPGNGRA TVRCEGIGIG
Sbjct: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 215
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 215

[Close]

BLAST of Chy11G197580 vs. NCBI nr
Match: XP_004139925.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis sativus] >KGN46772.1 hypothetical protein Csa_020955 [Cucumis sativus])

HSP 1 Score: 438 bits (1126), Expect = 4.85e-155
Identity = 210/215 (97.67%), Postives = 210/215 (97.67%), Query Frame = 0


Query: 1   MAPLASMFNGAPLAPPLHLHSSRHHALTSPTMLPINNRRSSFRPGNGRAETVRCEGIGIG 60
           MAPLASMFNGAPLAPPLH HSSRHH LTSP MLPINNRRSS RPGNGRA TVRCEGIGIG
Sbjct: 1   MAPLASMFNGAPLAPPLHFHSSRHHPLTSPAMLPINNRRSSLRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 215
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 215

[Close]

BLAST of Chy11G197580 vs. NCBI nr
Match: KAA0033539.1 (NAD(P)H-quinone oxidoreductase subunit N [Cucumis melo var. makuwa] >TYJ95648.1 NAD(P)H-quinone oxidoreductase subunit N [Cucumis melo var. makuwa])

HSP 1 Score: 410 bits (1053), Expect = 4.91e-144
Identity = 196/201 (97.51%), Postives = 198/201 (98.51%), Query Frame = 0


Query: 1   MAPLASMFNGAPLAPPLHLHSSRHHALTSPTMLPINNRRSSFRPGNGRAETVRCEGIGIG 60
           MAP+ASMFNGAPLAPPLHLHSSRHH LTSP M+PINNRRSSFRPGNGRA TVRCEGIGIG
Sbjct: 1   MAPVASMFNGAPLAPPLHLHSSRHHPLTSPAMVPINNRRSSFRPGNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNW 201
           FLALLPTLRPKVRVIAECGNW
Sbjct: 181 FLALLPTLRPKVRVIAECGNW 201

[Close]

BLAST of Chy11G197580 vs. NCBI nr
Match: XP_023007243.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita maxima])

HSP 1 Score: 394 bits (1012), Expect = 1.21e-137
Identity = 192/214 (89.72%), Postives = 194/214 (90.65%), Query Frame = 0


Query: 1   MAPLASMFNGAPLAPPLHLHSSRHHALTSPTMLPINNRRSSFRPGNGRAETVRCEGIGIG 60
           M PLASM NGA LAP LHLH  R   LTSP  L +  RR+ F  G GRA TVRCEGIGIG
Sbjct: 1   MPPLASMLNGAALAPSLHLHPRRLRPLTSPATLQVIGRRTRFGTGKGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRL ALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLEALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214
           FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG
Sbjct: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAG 214

[Close]

BLAST of Chy11G197580 vs. NCBI nr
Match: XP_038900583.1 (NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Benincasa hispida])

HSP 1 Score: 394 bits (1011), Expect = 1.65e-137
Identity = 192/215 (89.30%), Postives = 196/215 (91.16%), Query Frame = 0


Query: 1   MAPLASMFNGAPLAPPLHLHSSRHHALTSPTMLPINNRRSSFRPGNGRAETVRCEGIGIG 60
           MAP+ASM NGA LAPPL L     H  T P  +P++ RRSSF   NGRA TVRCEGIGIG
Sbjct: 1   MAPVASMLNGAALAPPLRLQPRLQHPRTLPFTVPMSVRRSSFAARNGRAATVRCEGIGIG 60

Query: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120
           DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD
Sbjct: 61  DFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYEGRYLNRLRYQGYYFLDLSARGLGD 120

Query: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180
           PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ
Sbjct: 121 PETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAALPPNAKGLVVWIIEAKVLSKAELQ 180

Query: 181 FLALLPTLRPKVRVIAECGNWRKFMWKPLKEIAGA 215
           FLALLPTLRP VRVIAECGNWRKFMWKPLKEIAGA
Sbjct: 181 FLALLPTLRPNVRVIAECGNWRKFMWKPLKEIAGA 215

[Close]

BLAST of Chy11G197580 vs. TAIR 10
Match: AT5G58260.1 (oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor )

HSP 1 Score: 295.8 bits (756), Expect = 2.8e-80
Identity = 139/177 (78.53%), Postives = 155/177 (87.57%), Query Frame = 0


Query: 37  NRRSSFRPGNGRAETVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYE 96
           N RS  R   G    V+C    I D+IGGDL+K D+GQWL DVEEHKA+AIY+PHEGGYE
Sbjct: 33  NTRSKRRRSTG----VKCS--SIADYIGGDLVKPDIGQWLQDVEEHKAIAIYAPHEGGYE 92

Query: 97  GRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAA 156
           GRYLNRL+ QGYYFLD+SARGLGDPETTL K +PVCPAHLGKQPIARWY+PPEVDYRLAA
Sbjct: 93  GRYLNRLKMQGYYFLDISARGLGDPETTLLKNYPVCPAHLGKQPIARWYYPPEVDYRLAA 152

Query: 157 LPPNAKGLVVWIIEAKVLSKAELQFLALLPTLRPKVRVIAECGNWRKFMWKPLKEIA 214
           LPP+AKGLVVW++EAKVLSK+ELQFLALLP+LRP VRVIAECGNWRKF+WKPL EIA
Sbjct: 153 LPPSAKGLVVWVLEAKVLSKSELQFLALLPSLRPNVRVIAECGNWRKFVWKPLAEIA 203

[Close]

BLAST of Chy11G197580 vs. TAIR 10
Match: AT5G58260.2 (oxidoreductases, acting on NADH or NADPH, quinone or similar compound as acceptor )

HSP 1 Score: 221.9 bits (564), Expect = 5.1e-58
Identity = 104/137 (75.91%), Postives = 117/137 (85.40%), Query Frame = 0


Query: 37  NRRSSFRPGNGRAETVRCEGIGIGDFIGGDLLKFDLGQWLSDVEEHKALAIYSPHEGGYE 96
           N RS  R   G    V+C    I D+IGGDL+K D+GQWL DVEEHKA+AIY+PHEGGYE
Sbjct: 33  NTRSKRRRSTG----VKCS--SIADYIGGDLVKPDIGQWLQDVEEHKAIAIYAPHEGGYE 92

Query: 97  GRYLNRLRYQGYYFLDLSARGLGDPETTLTKIHPVCPAHLGKQPIARWYFPPEVDYRLAA 156
           GRYLNRL+ QGYYFLD+SARGLGDPETTL K +PVCPAHLGKQPIARWY+PPEVDYRLAA
Sbjct: 93  GRYLNRLKMQGYYFLDISARGLGDPETTLLKNYPVCPAHLGKQPIARWYYPPEVDYRLAA 152

Query: 157 LPPNAKGLVVWIIEAKV 174
           LPP+AKGLVVW++EAKV
Sbjct: 153 LPPSAKGLVVWVLEAKV 163

The following BLAST results are available for this feature:

BLAST of Chy11G197580 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LVM2	3.9e-79	78.53	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Arabidopsis thaliana ...	[more]
B8HUU1	2.7e-35	48.32	NAD(P)H-quinone oxidoreductase subunit N OS=Cyanothece sp. (strain PCC 7425 / AT...	[more]
B7JYJ3	1.9e-33	48.23	NAD(P)H-quinone oxidoreductase subunit N OS=Rippkaea orientalis (strain PCC 8801...	[more]
Q31L05	7.2e-33	49.66	NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus elongatus (strain PCC ...	[more]
Q5N0W6	7.2e-33	49.66	NAD(P)H-quinone oxidoreductase subunit N OS=Synechococcus sp. (strain ATCC 27144...	[more]

BLAST of Chy11G197580 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C430	3.3e-121	97.67	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucumis melo OX=3656 ...	[more]
A0A0A0KEC3	9.6e-121	97.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G133810 PE=4 SV=1	[more]
A0A5A7SWJ9	6.2e-112	97.51	NAD(P)H-quinone oxidoreductase subunit N OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A6J1L763	2.1e-107	89.72	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita maxima OX=3...	[more]
A0A6J1G6N3	1.5e-105	88.79	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic OS=Cucurbita moschata OX...	[more]

BLAST of Chy11G197580 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008456262.1	1.19e-155	97.67	PREDICTED: NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis melo...	[more]
XP_004139925.1	4.85e-155	97.67	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucumis sativus] >KGN46...	[more]
KAA0033539.1	4.91e-144	97.51	NAD(P)H-quinone oxidoreductase subunit N [Cucumis melo var. makuwa] >TYJ95648.1 ...	[more]
XP_023007243.1	1.21e-137	89.72	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Cucurbita maxima]	[more]
XP_038900583.1	1.65e-137	89.30	NAD(P)H-quinone oxidoreductase subunit N, chloroplastic [Benincasa hispida]	[more]

BLAST of Chy11G197580 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58260.1	2.8e-80	78.53	oxidoreductases, acting on NADH or NADPH, quinone or similar compound as accepto...	[more]
AT5G58260.2	5.1e-58	75.91	oxidoreductases, acting on NADH or NADPH, quinone or similar compound as accepto...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020874	NAD(P)H-quinone oxidoreductase, subunit N	PFAM	PF11909	NdhN	coord: 74..211 e-value: 3.5E-56 score: 189.1
IPR020874	NAD(P)H-quinone oxidoreductase, subunit N	PANTHER	PTHR35515	NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT N, CHLOROPLASTIC	coord: 32..214

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G197580.1	Chy11G197580.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0050832	defense response to fungus
biological_process	GO:0010258	NADH dehydrogenase complex (plastoquinone) assembly
cellular_component	GO:0016020	membrane
molecular_function	GO:0016655	oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
molecular_function	GO:0048038	quinone binding