Chy11G197170 (gene) Cucumber (hystrix) v1

Overview
NameChy11G197170
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH11: 17097551 .. 17103048 (-)
RNA-Seq ExpressionChy11G197170
SyntenyChy11G197170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTCTTCCCCGACGCACAGAAACGTCACCGAAAACACAAACAACATCGCAAAAAGCTACCGCAACGCCGCACACGACGTCGGCAGCAAAGTAGCTAAAAGTTCATCGGGGATACTTTTCGCGAAGCCGCTCGCTGCCAAGCGGCAAAATATTTCCCGACGCATGGTCCCAATACGTCGTGGAAGGCTTCGACGGAGCAGACGTTGCGGAAGGCTTCAGCAGCACAGACGTTGTGGAAAGCTTTTACGACGCCGGCGTCGCATAAGCCTTCTGCGACGTCTGCGTCACAAAAGGTTTTTTTTTTTTTATTATTATTTTATTATTATTATTATATATTCATTGGTGCGAATTAATAAAATTTGTAGTAAACTTATAGAAATAAAAGTATTATTCATTACGAAGTCAAATGATAAATTAAATATGTTCGATACAAGAAATTAATTACATAATTCAAAACATTACATAAAATAAAAACTTAAGATCTAATGATCTCGTGCAGTGGACGCCAAACCTACAAATAACATGAAAGTAATGTTAGAATATCACATATGGAAAGTTAAACAAATTAAATATTGAAAAGTGCGTACCCAAGTGATCACGGGCCTCTCTGTGCACAACTCATCTCCTCAAGCATCTTCTTCATCTCTTCCATTTGTCGTGCCTGGTCCGCAATTTGTTGATCTCGCTCCTCCTCCCTCAAGCGTTGTTAGACAAGTTTTTTTTAACTCTTCTTCTTAATCCGTTAGACAATCATACGCACACCAAACGTCCATAGATTTTTTAACTCTTCAAGTAATGACTGTAGGAATTAATCTTATATCTAGACTCACCACAAGTCGGACAATGTTGCAAGTCCTCGAACTCCTTCCAAAACAATACACAGTCATACTTACAAGCATGGATAGTCTCGTACCCTAAGCCCAAATCATGTAATTTTCGTTTGGCTTCATAGAATGAACTAGGGATGTTAGTACCACACATTGGAAATGCACGTTTTATTAAATCCAACATCATATCGAAGGACTTTTTGCTCCAACCATTGAGAATCTTGACGTGCATCATTTTAACCAAAAAATTTAGTGACGAAAATTCAGAACACCCGGGGTATAGCTCACAACTTGCTTGATTTAGTAACTCCTGAAATACGTTATTTGTTTTGTCTTCTTCTAACTCTAAACCTTCCTCCCTCTCTTCTACATTTTCAATACCAGCTTGTAAGTCATGCAACATATTCAACATTTCATTTTCTTCAGTAACCGGGTTACTGCTGGTTCCTTCATCAACTATTGGGTTACTGCTAGTCCCTTCATCAATTATTAGCTAACTACTACTCGTTCCTTCATTAAATGTTTGTATACCTATGTTCAATGTCAAAGGCTCTCCATGATACATCCAGTTGATATAGAAGGAGGCTATTCAAGTGATTAATAGATGTCGCCTCAGACCCTCTAAGGAGTCCCAGTTTGAATTCATACATTTCTTGCATGGACACCTTAATTTTCTATAATTATTTGTGTGATGTTTTGCGACCTCTAAAAACTGAAAAACTCCTTCTCTGTACTCAACAGAGAACTTATCCCTAATTTTCATCCAACTCTTGTCCATCTCGTTAAAGAGCCTAACAAATAAATATGTTATATTAGTTTTATACATGCTCCATTTTAGTTACGTTAATTAAAAATTTTAAAAATTCAAATGCAATTTCAAATATTGAATATCAAATTCAATATTGCAATTTATATTTACAACCCTAAAGATATTCAAATTTCATCTAAATTCATACATTATTTAAAGTTTTATTAATTTTCTAATTGCAATAAAAAAATATATACATACATATACATATGCACTAAACTATACATACATATATATTACACATTACACTTTAAATATACATATAACACATAAAATTAAACCTATATATACATATACATACACCCTAAACATATACACATAACACATACAAAATAAACATATACCTAAATATAAATAGACATACACATTAAATATACACATAACACATACACACACATAAAATTATACTAACACATAAACAATAAATATACATGCACATTAAATATACATACACATTAAATATACACATAACACATACACACACATAAAATTATACTAACACATAAATAATAAACATATACATAAACCCTAAACCCTAAACATAAATGCAAAAAAAATACAAAAAAATGACCTCAAGACGGCGGCCGGCAAGGACAACGGTGACAGAGGCGGTGCTGCGATGACGGGCGGCATCTACAACGGCGACAATGGGTGACAACGACAACGACTCTCTCACTTTATCTCTCGATTTCTCCCTTTCTTTCTCACTTACCTTCTCTTCCGAATGAAATCTGGGTTGAAATAGTCGGAACTTTTGGCAACGTCTTCGAAAAAGTCGCAGAAAGCACGTTTCCGTGACGTGGAAGTTGTTGACGTCGCAAAAATTGAAAAAACGAATTTATTACGTTTCCACTTTTTGCGACGTGTGTCAGAGGCGCGTCGCGGAAAGTGGAAACGTAATAAATTTTGTTTCATTTTTCGCGACGTGCCACAGACACACGTCGTGGAAAATTGAAAGTTATGTTTACTTTCCGCGACGTTCAAGGACAACCACGTCGCGAAAAGTGGAAAACAAATTTTTTACTTTTCACTTTTCGTGACGTGGCACGTCGTGGAAACATGAAACATTATGTTTCTTTGTTACCTTTCTGCGACCTTCAAGGACAACCACGTCGTCGAAAGTGTTAAAAAAATTTATTATGAAATTAAAGTTGAATCGTTTCAATGACGTTTTGCCCTACGACGACGTCGGAGGACACTGTGTCGCGGAAGGTACCGCGACTTGGAAGCGACGTGCGTCACGGAAAATCTTGACTAAAATGAATCGTTCGGCTTTCCGCGACGTGTCCGGAATGAACATCGCGGAAAAGTGAAACAATAAATTAATGAGTACACTTTCTGCAACGTGGAGGCGACGTGCGTTGCGAAAACTCTTACCAAAATGAATTGTTCGACTTACCGCGACGTGTCCTGGAAGGATGTCACGGAAAAGTGAAACAATAAATTAATGAGTCCACTTTTCAGCGACGTGGAGGCAACGTGCGTAGTGGAAACTCTTGACCAAAATGATTCGTTCAGCTTTCCGCGACGTGTCCGGGACGGACGTTGCAAAAAAGTGAAACAATAAATTAATGAGTACACTTTCCACGACATGGAGGCGATGTGCATCGTGGAAACTCTTGACCAAAACGAATCGTTCGGCTTTCTGCGACGTGTTTGGGACGGACGTCACGAAAAAGTGAAACAATAAATTTGTTTTTGAGACGTCACAGAAAGTGGTATTTAGCAACGCGTTAGCAAGAACGTCGCGGAAAGTCTAGCAATGCCAACGTTGCTTTCAGCGACGTCATTTCTGGAGTTGCGAAAGCTCCATTTTCTTGTAGTGTGTGCACATTGTTAGAGAAGTCAAATTTTATGGGCTTGTATATCTAAGATGGATGTATCCCTCTGAAAGATACATGAAAATTCTAAAAAACTATGTGAGAAATAGACATCGTTCAGAGGGTTGTATTGCAAAAAGCTACATAGTAGAAAAAGTTATTGAGTTTTGTTCAGACCTCTTATCTGGGGTTGATCCCGTTGGGCTAGGCATTAACAAATTAGATGCATCTTTAGACAATTCAAGCTTTGGTAGACCATTGTCTTCAGGAGTTTCCTTTAGACTTGAATAAGATCTTCTATACCAAGATCATCAGTATGTTTTGGCAAATACAATTGATGTGCAACCATATATAAAGTAAGTTAAAGTTTCAATTATCTTGAGAGTAAGTTAAAGTTTCAATTATCTTGTCTTCTATTTTTTATTTAATTTTACGACATAAACTTAACTTTATGTTACAATGTTTCAATGTTCAACTAAACACATGAGGGTATTGCAATTGAAATACCCAAATAAGGTTCTTCATAAAAAATGGATTCAAGAAGAACACAATCAAACTTTCATATCTTGGTTAAGACAAGAGGTAAAATTTTAAAATTATTGATATTTTTTTATGGTGAACATTGTAATTACGTTAAGGTACTTATCATGGTAGGTTGCATATGAGATTGGGATGGGAAATGTTGAAGTTTCAGATAACTTGAGGTGGGTTGCTCATGGCCCTCATCCTTTTGTCATTAAGTACAATAGTTATGCCATTAATGGATGTCACTATCACATGAAGTCGTATGATCATAATCGAAATGTACAAAATAGTGGAGTTAGTTTAGTGGCAGAAACAATGCAATTGTCAAAAGATAAAAACCCCATCGTTGGAGATATTGCTTTTATGGAGTGATTTAAGACATATGGGACCTTAATTGTAATACGTCCAATGTTGCAGTGTTTAGATGCGATTGGGTTGAGAACAATAGTGGTATGAAGATCGATGACCTTGGTTTTCTGTTAGTTGATTTAAAAAGAATAGGTCACAAGTCTGATCCATTTATAATGGCAACCCAAGTAAGGCAAGTTTTTTACGTTGAAGATCCAAGTGATGTTAGATGATCAAGTGATTACTCCACCACAGAGAAATTGTGAAGATCAATCAAATGAAGTTGAACTTGAAGATATCATGTTACATTGTCAAGGAATACCTAGTGATATGCCAAATATCGATGAAAGTAATGATTTAGATGAGAATATCTCAACATATGTACGATCAGACTGTGAAGGCACATGGGTTCCTAAATAACACATTGTGGGTGGGTTTCTACTTGTTAGATATGTACATATATGCTATGTTTTTATTTTGAATATGCCTAAACCCTAGACCCTAATATAATCTACACTAAAAAATTTCTTTTTAATATTGCTTTGACAGGATATTCTCCTTACACATGGAGCCAAAGATAGTAAGTGATGATCAAGACAAGGAGGTTGATGTATTAGTTGCTGGAGGAGCTAATGAACAAATTGTAGAGAAGCCCAAAAAACAAAGGAAGCGGGGACCTACAATTATATTCAATGTGACTCGTGTTCGAAGTGAAGGTGAGAGGAAATTAGTGGAATATAATGCAGATGGCGAACCCATTAGGGAAAATGCGGTGAAGCTAAACTTTATTATTGGATCATGTGTACACTACCACATCCCCATTAACTATCCATCATGGACAAATGTACCTATTGAATTGAAGGACAAGATCTATACCATAGTTAAGGTAAATTTGCTTATAATTTTTGTACAAGTTTATTTCAATTGACAATGTGACACTAACTGATATTCAATCTTAGGCTGCATTTACAATTGACAGTAGATCTAGAAAATACGTTCTTCAGACTGCAAGGATAACATTCCGTCAATTTAAGCATTGGTTGACGATGAAGCATATCTTACCATTCAAGAATGAATCTGAACTTTTGAGACGACACACAAACATGTATTCTTACATTAACCAAGAACAGTGGGAAGAATTTGTTAGATCTAGACTATGTCCACATTTTGAG

mRNA sequence

CTCTTCCCCGACGCACAGAAACGTCACCGAAAACACAAACAACATCGCAAAAAGCTACCGCAACGCCGCACACGACGTCGGCAGCAAAGTAGCTAAAAGTTCATCGGGGATACTTTTCGCGAAGCCGCTCGCTGCCAAGCGGCAAAATATTTCCCGACGCATGGTCCCAATACGTCGTGGAAGGCTTCGACGGAGCAGACGTTGCGGAAGGCTTCAGCAGCACAGACGTTGTGGAAAGCTTTTACGACGCCGGCGTCGCATAAGCCTTCTGCGACGTCTGCGTCACAAAAGGATATTCTCCTTACACATGGAGCCAAAGATAGTAAGTGATGATCAAGACAAGGAGGTTGATGTATTAGTTGCTGGAGGAGCTAATGAACAAATTGTAGAGAAGCCCAAAAAACAAAGGAAGCGGGGACCTACAATTATATTCAATGTGACTCGTGTTCGAAGTGAAGGTGAGAGGAAATTAGTGGAATATAATGCAGATGGCGAACCCATTAGGGAAAATGCGGTGAAGCTAAACTTTATTATTGGATCATGTGTACACTACCACATCCCCATTAACTATCCATCATGGACAAATGTACCTATTGAATTGAAGGACAAGATCTATACCATAGTTAAGGCTGCATTTACAATTGACAGTAGATCTAGAAAATACGTTCTTCAGACTGCAAGGATAACATTCCGTCAATTTAAGCATTGGTTGACGATGAAGCATATCTTACCATTCAAGAATGAATCTGAACTTTTGAGACGACACACAAACATGTATTCTTACATTAACCAAGAACAGTGGGAAGAATTTGTTAGATCTAGACTATGTCCACATTTTGAG

Coding sequence (CDS)

CTCTTCCCCGACGCACAGAAACGTCACCGAAAACACAAACAACATCGCAAAAAGCTACCGCAACGCCGCACACGACGTCGGCAGCAAAGTAGCTAAAAGTTCATCGGGGATACTTTTCGCGAAGCCGCTCGCTGCCAAGCGGCAAAATATTTCCCGACGCATGGTCCCAATACGTCGTGGAAGGCTTCGACGGAGCAGACGTTGCGGAAGGCTTCAGCAGCACAGACGTTGTGGAAAGCTTTTACGACGCCGGCGTCGCATAAGCCTTCTGCGACGTCTGCGTCACAAAAGGATATTCTCCTTACACATGGAGCCAAAGATAGTAAGTGATGATCAAGACAAGGAGGTTGATGTATTAGTTGCTGGAGGAGCTAATGAACAAATTGTAGAGAAGCCCAAAAAACAAAGGAAGCGGGGACCTACAATTATATTCAATGTGACTCGTGTTCGAAGTGAAGGTGAGAGGAAATTAGTGGAATATAATGCAGATGGCGAACCCATTAGGGAAAATGCGGTGAAGCTAAACTTTATTATTGGATCATGTGTACACTACCACATCCCCATTAACTATCCATCATGGACAAATGTACCTATTGAATTGAAGGACAAGATCTATACCATAGTTAAGGCTGCATTTACAATTGACAGTAGATCTAGAAAATACGTTCTTCAGACTGCAAGGATAACATTCCGTCAATTTAAGCATTGGTTGACGATGAAGCATATCTTACCATTCAAGAATGAATCTGAACTTTTGAGACGACACACAAACATGTATTCTTACATTAACCAAGAACAGTGGGAAGAATTTGTTAGATCTAGACTATGTCCACATTTTGAG

Protein sequence

LFPDAQKRHRKHKQHRKKLPQRRTRRRQQSS*KFIGDTFREAARCQAAKYFPTHGPNTSWKASTEQTLRKASAAQTLWKAFTTPASHKPSATSASQKDILLTHGAKDSK**SRQGG*CISCWRS**TNCREAQKTKEAGTYNYIQCDSCSK*R*EEISGI*CRWRTH*GKCGEAKLYYWIMCTLPHPH*LSIMDKCTY*IEGQDLYHS*GCIYN*Q*I*KIRSSDCKDNIPSI*ALVDDEAYLTIQE*I*TFETTHKHVFLH*PRTVGRIC*I*TMSTF*X
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy11G197170.1Chy11G197170.1mRNA