Chy11G196540 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G196540
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	BED-type domain-containing protein
Location	chrH11: 15335521 .. 15335933 (+)
RNA-Seq Expression	Chy11G196540
Synteny	Chy11G196540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTTGATCACAAAGGATTTAGAAATTTTTTGAGTGGTGTTCAACCAATGTTTAAGATGATTTCAAGAAGCACGATGAAGAGAGATATAATAAAAATTTATGAAGAAGAGAGAATTAAAACAATGAAATTTTTGGAAAGCAACAAATGTAGGATTGTCCTTACTACAGACATGTGGACTGTGACAAGCCAGAAGAAGGGATACATGGCAATGACTGCACATTTTATTGATGATTCTTGGGTCCTACAAAGTAGACTTTTGAGGTAATTTAATTCAAATATTTCATCTTATAATCTATTTTTTGTTCAACATTTAGTAGTTTTCATTTTAACATATTATTACGTAATAATAGGTTTGTACATATGCCATTTCCACATACTGGACATTTGCTTGCTGAAGCATTAATGGAGTGA

mRNA sequence

ATGGTTGATCACAAAGGATTTAGAAATTTTTTGAGTGGTGTTCAACCAATGTTTAAGATGATTTCAAGAAGCACGATGAAGAGAGATATAATAAAAATTTATGAAGAAGAGAGAATTAAAACAATGAAATTTTTGGAAAGCAACAAATGTAGGATTGTCCTTACTACAGACATGTGGACTGTGACAAGCCAGAAGAAGGGATACATGGCAATGACTGCACATTTTATTGATGATTCTTGGGTCCTACAAAGTAGACTTTTGAGGTTTGTACATATGCCATTTCCACATACTGGACATTTGCTTGCTGAAGCATTAATGGAGTGA

Coding sequence (CDS)

ATGGTTGATCACAAAGGATTTAGAAATTTTTTGAGTGGTGTTCAACCAATGTTTAAGATGATTTCAAGAAGCACGATGAAGAGAGATATAATAAAAATTTATGAAGAAGAGAGAATTAAAACAATGAAATTTTTGGAAAGCAACAAATGTAGGATTGTCCTTACTACAGACATGTGGACTGTGACAAGCCAGAAGAAGGGATACATGGCAATGACTGCACATTTTATTGATGATTCTTGGGTCCTACAAAGTAGACTTTTGAGGTTTGTACATATGCCATTTCCACATACTGGACATTTGCTTGCTGAAGCATTAATGGAGTGA

Protein sequence

MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWTVTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEALME*

Homology

[Close]

BLAST of Chy11G196540 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2)

HSP 1 Score: 79.0 bits (193), Expect = 3.8e-14
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           +V+H+ F  F+  ++P F + SR T ++ I+ +Y EE+ K    L+  + R   T DMWT
Sbjct: 245 IVEHEYFVEFVKSLRPHFPIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWT 304

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAE 104
            + Q K YM +T H+IDD W LQ R++ F H+   HTG  L++
Sbjct: 305 -SCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQ 346

[Close]

BLAST of Chy11G196540 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 3.8e-14
Identity = 40/103 (38.83%), Postives = 62/103 (60.19%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           +V+H+ F  F+  ++P F + SR T ++ I+ +Y EE+ K    L+  + R   T DMWT
Sbjct: 190 IVEHEYFVEFVKSLRPHFPIKSRVTARKYIMDLYLEEKEKLYGKLKDVQSRFSTTMDMWT 249

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAE 104
            + Q K YM +T H+IDD W LQ R++ F H+   HTG  L++
Sbjct: 250 -SCQNKSYMCVTIHWIDDDWCLQKRIVGFFHVEGRHTGQRLSQ 291

[Close]

BLAST of Chy11G196540 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-12
Identity = 35/105 (33.33%), Postives = 62/105 (59.05%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           +V+ +GF  F+  +QP F++I   T++  +  +Y++ER   M    +   RI LT  +W 
Sbjct: 225 IVEQRGFTAFIGSLQPRFRVIDVDTIEGQVHSVYQKERENLMHVFSTVPGRISLTVRLW- 284

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEAL 106
            TSQ  GY+++ A FID  W +  R++ F+ +  PH+ + L+EA+
Sbjct: 285 ATSQTLGYISLAAQFIDTEWRVHRRMVNFMMVSSPHSENSLSEAI 328

[Close]

BLAST of Chy11G196540 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 4.6e-12
Identity = 37/105 (35.24%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           MV H GF +F+  +QP F  +S + ++ D +  Y  E+   MK LE    R  LT D WT
Sbjct: 182 MVQHPGFVSFVQSIQPHFDAVSFNNVQGDCVATYLAEKQNVMKSLEGIPGRFCLTLDFWT 241

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEAL 106
            +    GY+ +TAH+ID  W +Q +LL  +   +P     L+ A+
Sbjct: 242 -SKLTLGYVFITAHYIDSDWKIQKKLLNVLMESYPEADEALSLAV 285

[Close]

BLAST of Chy11G196540 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3)

HSP 1 Score: 61.6 bits (148), Expect = 6.2e-09
Identity = 33/107 (30.84%), Postives = 60/107 (56.07%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           +V    F +F+  VQP FKM+   T++ ++  IY +E+    + L +   RI LT    T
Sbjct: 152 IVQQPAFLSFVDSVQPNFKMVDIGTIETEVYAIYLKEKDHLQQALANIPGRISLTVGSLT 211

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEALME 108
            T+Q   Y+++ A FID  W L  R+L+ +  P+P + + ++ A+++
Sbjct: 212 -TNQSIRYISLAAQFIDSEWRLHRRVLKVMMAPWPQSENAVSRAIIK 257

[Close]

BLAST of Chy11G196540 vs. ExPASy TrEMBL
Match: M5X4E3 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa023156mg PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 7.8e-31
Identity = 61/107 (57.01%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           MVDH GF+ + + +QP+FK+ SR+T+K+DI K++E ER KTMK L++N+ RI +TTDMWT
Sbjct: 104 MVDHIGFKMYSNALQPLFKVCSRNTIKKDIFKVFEVEREKTMKLLDTNRSRIAITTDMWT 163

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEALME 108
             +QK+G+M +T+HFIDD+W LQSRL+RF+++P PHT  +LA+AL+E
Sbjct: 164 SNNQKRGFMTITSHFIDDAWNLQSRLIRFIYVPCPHTAEVLADALLE 210

[Close]

BLAST of Chy11G196540 vs. ExPASy TrEMBL
Match: M5XAH1 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020713mg PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 7.8e-31
Identity = 61/107 (57.01%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           MVDH GF+ + + +QP+FK+ SR+T+K+DI K++E ER KTMK L++N+ RI +TTDMWT
Sbjct: 104 MVDHIGFKMYSNALQPLFKVCSRNTIKKDIFKVFEVEREKTMKLLDTNRSRIAITTDMWT 163

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEALME 108
             +QK+G+M +T+HFIDD+W LQSRL+RF+++P PHT  +LA+AL+E
Sbjct: 164 SNNQKRGFMTITSHFIDDAWNLQSRLIRFIYVPCPHTAEVLADALLE 210

[Close]

BLAST of Chy11G196540 vs. ExPASy TrEMBL
Match: M5Y3E1 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa016870mg PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 7.8e-31
Identity = 61/107 (57.01%), Postives = 89/107 (83.18%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           MVDH GF+ + + +QP+FK+ SR+T+K+DI K++E ER KTMK L++N+ RI +TTDMWT
Sbjct: 104 MVDHIGFKMYSNALQPLFKVCSRNTIKKDIFKVFEVEREKTMKLLDTNRSRIAITTDMWT 163

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEALME 108
             +QK+G+M +T+HFIDD+W LQSRL+RF+++P PHT  +LA+AL+E
Sbjct: 164 SNNQKRGFMTITSHFIDDAWNLQSRLIRFIYVPCPHTAEVLADALLE 210

[Close]

BLAST of Chy11G196540 vs. ExPASy TrEMBL
Match: A0A6A5LG56 (Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00043715 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30
Identity = 64/107 (59.81%), Postives = 84/107 (78.50%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           MVDH  F+ F   +QP+FK ISR+T+K DIIK+Y EER+KTM F+  N+ R  +TTDMWT
Sbjct: 151 MVDHILFKEFCGALQPLFKGISRNTVKGDIIKMYTEERLKTMTFISKNQSRFAITTDMWT 210

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEALME 108
            ++Q KGYMA+T HFIDDSWVLQSRL+RF+++P PHT  +L++ L E
Sbjct: 211 ASNQNKGYMAVTTHFIDDSWVLQSRLVRFMYVPAPHTSEVLSDCLYE 257

[Close]

BLAST of Chy11G196540 vs. ExPASy TrEMBL
Match: A0A2Z7CML7 (Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_34019 PE=4 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-30
Identity = 64/107 (59.81%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           MVDH GF+ +   +QP+FK++SR+T+K DI+KI+E E+ KTMK L+SN  RI LTTDMWT
Sbjct: 30  MVDHVGFKRYSYALQPLFKVVSRNTIKNDIMKIFEYEKEKTMKLLDSNASRIALTTDMWT 89

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEALME 108
            ++QK+G+MA+T+HFID SW LQSRL+RF+++P PHT  +LA AL+E
Sbjct: 90  SSNQKRGFMAITSHFIDVSWKLQSRLVRFIYVPCPHTAEVLANALVE 136

[Close]

BLAST of Chy11G196540 vs. NCBI nr
Match: XP_028108647.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Camellia sinensis])

HSP 1 Score: 147 bits (371), Expect = 2.06e-41
Identity = 61/107 (57.01%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           +VDH GF+ + + +QP+FK+ SR+T+K DI+KIY+ ER+KT+  +E NK R+ +TTDMWT
Sbjct: 156 IVDHVGFKRYSAALQPLFKVPSRNTIKSDILKIYDYERVKTLSLVEHNKSRVAITTDMWT 215

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEALME 107
            ++QKKG+MA+TAHFIDDSW LQSR+LRF+++P PHT  +L + L+E
Sbjct: 216 ASNQKKGFMAVTAHFIDDSWTLQSRILRFIYVPCPHTKEVLCDTLLE 262

[Close]

BLAST of Chy11G196540 vs. NCBI nr
Match: KZV48003.1 (hypothetical protein F511_34019 [Dorcoceras hygrometricum])

HSP 1 Score: 145 bits (365), Expect = 4.03e-41
Identity = 64/107 (59.81%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           MVDH GF+ +   +QP+FK++SR+T+K DI+KI+E E+ KTMK L+SN  RI LTTDMWT
Sbjct: 30  MVDHVGFKRYSYALQPLFKVVSRNTIKNDIMKIFEYEKEKTMKLLDSNASRIALTTDMWT 89

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEALME 107
            ++QK+G+MA+T+HFID SW LQSRL+RF+++P PHT  +LA AL+E
Sbjct: 90  SSNQKRGFMAITSHFIDVSWKLQSRLVRFIYVPCPHTAEVLANALVE 136

[Close]

BLAST of Chy11G196540 vs. NCBI nr
Match: XP_028113950.1 (zinc finger BED domain-containing protein RICESLEEPER 3-like [Camellia sinensis])

HSP 1 Score: 147 bits (371), Expect = 6.17e-41
Identity = 61/107 (57.01%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           +VDH GF+ + + +QP+FK+ SR+T+K DI+KIY+ ER+KT+  +E NK R+ +TTDMWT
Sbjct: 161 IVDHVGFKRYSAALQPLFKVPSRNTIKSDILKIYDYERVKTLSLVEHNKSRVAITTDMWT 220

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEALME 107
            ++QKKG+MA+TAHFIDDSW LQSR+LRF+++P PHT  +L + L+E
Sbjct: 221 ASNQKKGFMAVTAHFIDDSWTLQSRILRFIYVPCPHTKEVLCDTLLE 267

[Close]

BLAST of Chy11G196540 vs. NCBI nr
Match: KZV13808.1 (hypothetical protein F511_45014, partial [Dorcoceras hygrometricum])

HSP 1 Score: 145 bits (365), Expect = 1.41e-40
Identity = 64/107 (59.81%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           MVDH GF+ +   +QP+FK++SR+T+K DI+KI+E E+ KTMK L+SN  RI LTTDMWT
Sbjct: 33  MVDHVGFKRYSYALQPLFKVVSRNTIKNDIMKIFEYEKEKTMKLLDSNASRIALTTDMWT 92

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEALME 107
            ++QK+G+MA+T+HFID SW LQSRL+RF+++P PHT  +LA AL+E
Sbjct: 93  SSNQKRGFMAITSHFIDVSWKLQSRLVRFIYVPCPHTAEVLANALVE 139

[Close]

BLAST of Chy11G196540 vs. NCBI nr
Match: XP_028056220.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Camellia sinensis])

HSP 1 Score: 147 bits (371), Expect = 1.57e-40
Identity = 61/107 (57.01%), Postives = 88/107 (82.24%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           +VDH GF+ + + +QP+FK+ SR+T+K DI+KIY+ ER+KT+  +E NK R+ +TTDMWT
Sbjct: 156 IVDHVGFKRYSAALQPLFKVPSRNTIKSDILKIYDYERVKTLSLVEHNKSRVAITTDMWT 215

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEALME 107
            ++QKKG+MA+TAHFIDDSW LQSR+LRF+++P PHT  +L + L+E
Sbjct: 216 ASNQKKGFMAVTAHFIDDSWTLQSRILRFIYVPCPHTKEVLCDTLLE 262

[Close]

BLAST of Chy11G196540 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain )

HSP 1 Score: 72.0 bits (175), Expect = 3.3e-13
Identity = 37/105 (35.24%), Postives = 56/105 (53.33%), Query Frame = 0


Query: 1   MVDHKGFRNFLSGVQPMFKMISRSTMKRDIIKIYEEERIKTMKFLESNKCRIVLTTDMWT 60
           MV H GF +F+  +QP F  +S + ++ D +  Y  E+   MK LE    R  LT D WT
Sbjct: 182 MVQHPGFVSFVQSIQPHFDAVSFNNVQGDCVATYLAEKQNVMKSLEGIPGRFCLTLDFWT 241

Query: 61  VTSQKKGYMAMTAHFIDDSWVLQSRLLRFVHMPFPHTGHLLAEAL 106
            +    GY+ +TAH+ID  W +Q +LL  +   +P     L+ A+
Sbjct: 242 -SKLTLGYVFITAHYIDSDWKIQKKLLNVLMESYPEADEALSLAV 285

The following BLAST results are available for this feature:

BLAST of Chy11G196540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P08770	3.8e-14	38.83	Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2	[more]
P03010	3.8e-14	38.83	Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1	[more]
Q75HY5	1.6e-12	33.33	Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. j...	[more]
Q9M2N5	4.6e-12	35.24	Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=...	[more]
Q0JMB2	6.2e-09	30.84	Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. j...	[more]

BLAST of Chy11G196540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
M5X4E3	7.8e-31	57.01	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa023156mg PE=4 SV=1	[more]
M5XAH1	7.8e-31	57.01	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa020713mg PE=4 SV=1	[more]
M5Y3E1	7.8e-31	57.01	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa016870mg PE=4 SV=1	[more]
A0A6A5LG56	1.0e-30	59.81	Uncharacterized protein OS=Lupinus albus OX=3870 GN=Lal_00043715 PE=4 SV=1	[more]
A0A2Z7CML7	1.0e-30	59.81	Uncharacterized protein OS=Dorcoceras hygrometricum OX=472368 GN=F511_34019 PE=4...	[more]

BLAST of Chy11G196540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_028108647.1	2.06e-41	57.01	zinc finger BED domain-containing protein RICESLEEPER 3-like [Camellia sinensis]	[more]
KZV48003.1	4.03e-41	59.81	hypothetical protein F511_34019 [Dorcoceras hygrometricum]	[more]
XP_028113950.1	6.17e-41	57.01	zinc finger BED domain-containing protein RICESLEEPER 3-like [Camellia sinensis]	[more]
KZV13808.1	1.41e-40	59.81	hypothetical protein F511_45014, partial [Dorcoceras hygrometricum]	[more]
XP_028056220.1	1.57e-40	57.01	zinc finger BED domain-containing protein RICESLEEPER 2-like [Camellia sinensis]	[more]

BLAST of Chy11G196540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G42170.1	3.3e-13	35.24	BED zinc finger ;hAT family dimerisation domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR23272:SF130	OS01G0698300 PROTEIN	coord: 1..107
None	No IPR available	PANTHER	PTHR23272	BED FINGER-RELATED	coord: 1..107
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 43..105

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G196540.1	Chy11G196540.1	mRNA