Chy11G196040 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G196040
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	LOB domain-containing protein
Location	chrH11: 14506810 .. 14509058 (+)
RNA-Seq Expression	Chy11G196040
Synteny	Chy11G196040

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGGAGATTAGCGGAAGAAAACAAGGTACATCTCTTTCACCATGTGCAGCTTGTAAGCTTCTCCGTCGTAGATGTGCTCAAGATTGTGTTTTTGCCCCTTACTTCCCCGCCGACGAGCCTCATAAATTTGCTAGTGTTCATAAGGTCTTCGGAGCTAGTAATGTTAACAAGATGCTACAGGTTAGTAAGGCAAATTATGATTTTCTTTAATTACACATTGGTTTTGTTTAATTTCTCTCTTCTTTTGAATAATTCTTTTTGCTTTCTCCCTTATGTTTGGTAATGTAATTAATTAAACTAGTTTCTTTTTAATTTAAGGAAGTTTGGATTATTAATTATAGACGTGAGAGAGACTTGAATTTTTGGCTTAACCTGCTGATATAAACTCAAATTAGTGGTTAAAATAATTAGTTAGATTATTTGAAACAAAGAGGAGCCAACCATTCTATATTATCATATTATCCCTACTTAACCACACACAAATTGACAAAACAGCCCAATAACTTAAAAGAGGAAAAAATAAAGTAGGGTTTTATAAATATATATATATATATATATATATATATATATATATATATTATTAAAAAATTACATGATATTTTTCCATTGGTGTTCCATCGTTTTCTCTTGCTTTTTTCACTTTGATAATAAGCCACGACAAGATTAAACATCTCCTTCCCTCTCTTTCACACACTAGTTAGTAATTTAATACACTAATTATGAGTTACCATGATATTAACTTTTCAAGGCAAAAGAAAAAATAAAGTTTCCAACAACTACAAAACCGACACACTCAACCAATTAAAACTATAATGATAAGACACTAATTATCATAACCCATTTCATAATTCTCGGACTTATGAAAAGAAAAAAACAAATTTGCTATTTGAAACTGGATAATTAAATAAGATGGTAATGTAAATGTTATGTACCTTCTATTTCTATTTATTTTCCGTTATAGTGGTTAATTACGGTTGAGGAGCCCACTTTTTTCCAAAAAAAAAAAAAGAAAAAAAAAAAAAAGAAAAGAAAAAGAAAGTGTGTCTCTACTTTTTGAAAAAGCAAACCCTAAAATTGGTTGGAAGACCCATTCAGGAGATTCCTTAGCGTATGAAAGAGTAAAGAGGGATTGTTTAATTTTGTACTAACTAATTAATCAAACCATACTTTAATTAACCATACCCTTTGGTTAATTAACACTTAATGAAACCAAAGTATAACTTAATTATGTTTTCATTAATTATTTAATCTTCTCAACTTTAACCCTCCATTAGCCTTATAGCTTTCCGTTAAATTACAATATCAACCTGAACTTTTTTATTCCTTCTTTGGTAGCTCCAAAAGAAAGTTAAGATTCTAAATGTTTTTTTCTTCAAAAAAAGAAATTATTTTACTATCATAAATCAATATTATTTGTCTCATTCTAACGTCATAATGACATCTAAAATCCTTTCTTCATATAAAAGTAATGTAAATAGAGTTTGATATATACATTTCTTGTAAATATTTTAATAACTACTAATAAAATATGTTTGGTTGCTCAATATATAGATCAATTCACTAGTAAAGAAAATGGATGCAAATAAGTATTATGCATATAAGACAATATAATGTTGTTGAAATATCTTCACTTGTTATTTAGTGACAACAATCAAGTACATAGGAGAATATTGCTATACAAACTCTATAGTTTTAGGAGATAACCTAGACAAGATTCTTAACAAGCTCTTCCAGATTGTTTCTCTTTAGATTTACTCTACTTTAGTTTAATATTCTTTGAATTTTATAGGCTATAATACTATATTGATAAACATTTTTATCTCAAATAACCTAATTGACAATAGAAAGTTAAAGTAATCATATATTTAATAAAAATGATAAGATTTCATCATATTCCCAATTAACAGGAGCTACCAGAACAACAACGAAGCGATGCAGTAAGTTCAATGGTTTATGAAGCAAACGCAAGAGTACGAGATCCCGTTTACGGTTGCGTTGGAGCCATATCATCGTTACAACAACAGATCGATCTCTTGCAAACACAACTAGCAATAGCGCAAGCGGAGGTGGTTCACATGCGGATGCGCCACTTCCCGTCATCCTCTTACAACCCAACGGCAGGCCACTCATCGGAAACCGCCTCACCTTCCAGCAAGATGAACATTCCGGCGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAGCATGGGGGAGACCTTGTGGTCGTCTTGCTAG

mRNA sequence

ATGAAGGAGATTAGCGGAAGAAAACAAGGTACATCTCTTTCACCATGTGCAGCTTGTAAGCTTCTCCGTCGTAGATGTGCTCAAGATTGTGTTTTTGCCCCTTACTTCCCCGCCGACGAGCCTCATAAATTTGCTAGTGTTCATAAGGTCTTCGGAGCTAGTAATGTTAACAAGATGCTACAGGAGCTACCAGAACAACAACGAAGCGATGCAGTAAGTTCAATGGTTTATGAAGCAAACGCAAGAGTACGAGATCCCGTTTACGGTTGCGTTGGAGCCATATCATCGTTACAACAACAGATCGATCTCTTGCAAACACAACTAGCAATAGCGCAAGCGGAGGTGGTTCACATGCGGATGCGCCACTTCCCGTCATCCTCTTACAACCCAACGGCAGGCCACTCATCGGAAACCGCCTCACCTTCCAGCAAGATGAACATTCCGGCGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAGCATGGGGGAGACCTTGTGGTCGTCTTGCTAG

Coding sequence (CDS)

ATGAAGGAGATTAGCGGAAGAAAACAAGGTACATCTCTTTCACCATGTGCAGCTTGTAAGCTTCTCCGTCGTAGATGTGCTCAAGATTGTGTTTTTGCCCCTTACTTCCCCGCCGACGAGCCTCATAAATTTGCTAGTGTTCATAAGGTCTTCGGAGCTAGTAATGTTAACAAGATGCTACAGGAGCTACCAGAACAACAACGAAGCGATGCAGTAAGTTCAATGGTTTATGAAGCAAACGCAAGAGTACGAGATCCCGTTTACGGTTGCGTTGGAGCCATATCATCGTTACAACAACAGATCGATCTCTTGCAAACACAACTAGCAATAGCGCAAGCGGAGGTGGTTCACATGCGGATGCGCCACTTCCCGTCATCCTCTTACAACCCAACGGCAGGCCACTCATCGGAAACCGCCTCACCTTCCAGCAAGATGAACATTCCGGCGCCAAACAAGTCCTATTTTTCCATGGACATGGTTGACCACGACAGCATGGGGGAGACCTTGTGGTCGTCTTGCTAG

Protein sequence

MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHFPSSSYNPTAGHSSETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC*

Homology

[Close]

BLAST of Chy11G196040 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 2.5e-60
Identity = 128/175 (73.14%), Postives = 142/175 (81.14%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE S RKQG + SPCAACKLLRRRCAQDCVF+PYFPADEP KFA+VH+VFGASNVNKML
Sbjct: 1   MKE-SSRKQGAA-SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELP  QR DAVSSMVYEANARVRDPVYGCVGAISSLQQQID+LQ QLA+AQAEVVH+R+
Sbjct: 61  QELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRV 120

Query: 121 R---HFPSSSYNPTAGHSSETASPSSKMNIPAPNKSYFS-MDMVDHDSMGETLWS 172
           R   +FP     P +  SS   SPSSK   P  NK  FS MD+VD  S+GE++WS
Sbjct: 121 RQSTNFPGHGLCPDSPSSS--GSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWS 171

[Close]

BLAST of Chy11G196040 vs. ExPASy Swiss-Prot
Match: Q9SA51 (LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=1)

HSP 1 Score: 183.3 bits (464), Expect = 2.3e-45
Identity = 97/170 (57.06%), Postives = 120/170 (70.59%), Query Frame = 0


Query: 6   GRKQGTSLSPCAACKLLRRRCAQD-CVFAPYFPADEPHKFASVHKVFGASNVNKMLQELP 65
           G + G ++SPCA CKLLRR+C +D CVFAPYFPA EP+KFA VHK+FGASNVNKMLQEL 
Sbjct: 5   GHRHGRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELS 64

Query: 66  EQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHFP 125
           E  RSDAV SMVYEANAR++DPVYGCVG ISSL +Q++ LQTQLA AQAE++H+R  H  
Sbjct: 65  ENHRSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRTLH-- 124

Query: 126 SSSYNPTAGHSSETASPSSKMNIPAPNKSYFS---MDMVDHDSMGETLWS 172
                    H+      +S +  P+ NK ++S   M +   D  G+ LWS
Sbjct: 125 -------RIHTKPPPYTASTVTFPS-NKDFYSDIDMAVAYTDDAGDFLWS 164

[Close]

BLAST of Chy11G196040 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 178.7 bits (452), Expect = 5.6e-44
Identity = 84/116 (72.41%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 10  GTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRS 69
           G   SPCA+CKLLRRRCA+DC+FAPYFP D+PHKFA VHKVFGASNV+KMLQELP  QR+
Sbjct: 3   GPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 62

Query: 70  DAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHFPS 126
           DAV+S+V+EANARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++M++ P+
Sbjct: 63  DAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPT 118

[Close]

BLAST of Chy11G196040 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 159.5 bits (402), Expect = 3.5e-38
Identity = 81/153 (52.94%), Postives = 107/153 (69.93%), Query Frame = 0


Query: 12  SLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRSDA 71
           +++PCAACKLLRRRCAQ+C F+PYF   EPHKFASVHKVFGASNV+KML E+PE QR+DA
Sbjct: 42  TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADA 101

Query: 72  VSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRH------FPS 131
            +S+VYEAN R+RDPVYGC+GAIS+LQQQ+  LQ +L   ++E++  + R        PS
Sbjct: 102 ANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIVPS 161

Query: 132 SS----YNPTAGHSSETASPSSKMNIPAPNKSY 155
           +S    ++ + G S     P      P P  ++
Sbjct: 162 NSQVAGFHNSGGVSVIAPPPQRPTTPPQPTTAH 194

[Close]

BLAST of Chy11G196040 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 5.1e-37
Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 13  LSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRSDAV 72
           LSPCAACK+LRRRCA+ CV APYFP  +P KF   H+VFGASN+ K LQELPE QR+DAV
Sbjct: 31  LSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAV 90

Query: 73  SSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMR 122
           +SMVYEA AR+RDPVYGC GAI  LQ+Q+  LQ QLA AQ E+V+M+ +
Sbjct: 91  NSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQ 139

[Close]

BLAST of Chy11G196040 vs. ExPASy TrEMBL
Match: A0A0A0KBA8 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139130 PE=3 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 5.8e-92
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RHFPSSSYNPTAGHSSETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 174
           RHFPSSSYNPTAGHS ETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC
Sbjct: 121 RHFPSSSYNPTAGHSPETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 173

[Close]

BLAST of Chy11G196040 vs. ExPASy TrEMBL
Match: A0A5D3CBA3 (LOB domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3734G00510 PE=3 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 8.3e-91
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RHFPSSSYNPTAGHSSETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 174
           RH PSSSYNPT GHSSETASPSSKMNIP PNKSYFSMDMVDHDSMGETLWSSC
Sbjct: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 173

[Close]

BLAST of Chy11G196040 vs. ExPASy TrEMBL
Match: A0A6J1D8X3 (LOB domain-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111017996 PE=3 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.9e-75
Identity = 150/173 (86.71%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQGT LSPCAACKLLRRRCA DCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKESSGRKQGT-LSPCAACKLLRRRCAHDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPE QRSDAVSSMVYEANAR+RDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARMRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RHFPSSSYNPTAGHSSETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 174
           R FPS+S  P+A HS ETA    K+NIPA NKS+F+MDMV HD+MGE+LWSSC
Sbjct: 121 RQFPSTS-TPSAAHSPETA---GKLNIPAQNKSFFTMDMVGHDNMGESLWSSC 168

[Close]

BLAST of Chy11G196040 vs. ExPASy TrEMBL
Match: A0A6J1I1K8 (LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111469678 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.1e-74
Identity = 151/173 (87.28%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQG +++PCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKE-SGRKQG-AVAPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPE QRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQT+LAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTELAIAQAEVVHMRM 120

Query: 121 RHFPSSSYNPTAGHSSETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 174
           R F SSS NPTAGHS ETASPS K+NIP  NKSYFSM     D+MGE+LWSSC
Sbjct: 121 RQFTSSSSNPTAGHSPETASPSGKINIPPQNKSYFSM-----DNMGESLWSSC 166

[Close]

BLAST of Chy11G196040 vs. ExPASy TrEMBL
Match: A0A6J1G6E3 (LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC111451283 PE=3 SV=1)

HSP 1 Score: 289.3 bits (739), Expect = 1.1e-74
Identity = 151/173 (87.28%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQG +++PCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKE-SGRKQG-AVAPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPE QRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQT+LAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTELAIAQAEVVHMRM 120

Query: 121 RHFPSSSYNPTAGHSSETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 174
           R F SSS NPTAGHS ETASPS K+NIP  NKSYFSM     D+MGE+LWSSC
Sbjct: 121 RQFTSSSSNPTAGHSPETASPSGKINIPPQNKSYFSM-----DNMGESLWSSC 166

[Close]

BLAST of Chy11G196040 vs. NCBI nr
Match: XP_004150042.1 (LOB domain-containing protein 4 [Cucumis sativus] >KGN46813.1 hypothetical protein Csa_020952 [Cucumis sativus])

HSP 1 Score: 345 bits (886), Expect = 7.74e-120
Identity = 172/173 (99.42%), Postives = 172/173 (99.42%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RHFPSSSYNPTAGHSSETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 173
           RHFPSSSYNPTAGHS ETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC
Sbjct: 121 RHFPSSSYNPTAGHSPETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 173

[Close]

BLAST of Chy11G196040 vs. NCBI nr
Match: KAA0054642.1 (LOB domain-containing protein 4-like [Cucumis melo var. makuwa] >TYK08620.1 LOB domain-containing protein 4-like [Cucumis melo var. makuwa])

HSP 1 Score: 342 bits (876), Expect = 2.59e-118
Identity = 170/173 (98.27%), Postives = 170/173 (98.27%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RHFPSSSYNPTAGHSSETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 173
           RH PSSSYNPT GHSSETASPSSKMNIP PNKSYFSMDMVDHDSMGETLWSSC
Sbjct: 121 RHIPSSSYNPTMGHSSETASPSSKMNIPVPNKSYFSMDMVDHDSMGETLWSSC 173

[Close]

BLAST of Chy11G196040 vs. NCBI nr
Match: XP_038902133.1 (LOB domain-containing protein 4-like [Benincasa hispida])

HSP 1 Score: 327 bits (837), Expect = 2.30e-112
Identity = 163/173 (94.22%), Postives = 167/173 (96.53%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKEI+GRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKEINGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQID+LQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAIAQAEVVHMRM 120

Query: 121 RHFPSSSYNPTAGHSSETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 173
           R FPSSS N T GHS ETASPS KMNIPAPNKSYFSMDMVDHD+MGE+LWSSC
Sbjct: 121 RQFPSSSCNLTIGHSPETASPSGKMNIPAPNKSYFSMDMVDHDNMGESLWSSC 173

[Close]

BLAST of Chy11G196040 vs. NCBI nr
Match: XP_022149611.1 (LOB domain-containing protein 4 [Momordica charantia])

HSP 1 Score: 290 bits (743), Expect = 4.13e-98
Identity = 150/173 (86.71%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQGT LSPCAACKLLRRRCA DCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKESSGRKQGT-LSPCAACKLLRRRCAHDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPE QRSDAVSSMVYEANAR+RDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARMRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120

Query: 121 RHFPSSSYNPTAGHSSETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 173
           R FPS+S  P+A HS ETA    K+NIPA NKS+F+MDMV HD+MGE+LWSSC
Sbjct: 121 RQFPSTS-TPSAAHSPETAG---KLNIPAQNKSFFTMDMVGHDNMGESLWSSC 168

[Close]

BLAST of Chy11G196040 vs. NCBI nr
Match: XP_022947417.1 (LOB domain-containing protein 4-like [Cucurbita moschata] >XP_022970811.1 LOB domain-containing protein 4-like [Cucurbita maxima] >KAG6604717.1 LOB domain-containing protein 4, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034846.1 LOB domain-containing protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 288 bits (736), Expect = 4.49e-97
Identity = 151/173 (87.28%), Postives = 158/173 (91.33%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE SGRKQG +++PCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML
Sbjct: 1   MKE-SGRKQG-AVAPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELPE QRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQT+LAIAQAEVVHMRM
Sbjct: 61  QELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTELAIAQAEVVHMRM 120

Query: 121 RHFPSSSYNPTAGHSSETASPSSKMNIPAPNKSYFSMDMVDHDSMGETLWSSC 173
           R F SSS NPTAGHS ETASPS K+NIP  NKSYFSMD     +MGE+LWSSC
Sbjct: 121 RQFTSSSSNPTAGHSPETASPSGKINIPPQNKSYFSMD-----NMGESLWSSC 166

[Close]

BLAST of Chy11G196040 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 233.0 bits (593), Expect = 1.8e-61
Identity = 128/175 (73.14%), Postives = 142/175 (81.14%), Query Frame = 0


Query: 1   MKEISGRKQGTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKML 60
           MKE S RKQG + SPCAACKLLRRRCAQDCVF+PYFPADEP KFA+VH+VFGASNVNKML
Sbjct: 1   MKE-SSRKQGAA-SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKML 60

Query: 61  QELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRM 120
           QELP  QR DAVSSMVYEANARVRDPVYGCVGAISSLQQQID+LQ QLA+AQAEVVH+R+
Sbjct: 61  QELPIHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRV 120

Query: 121 R---HFPSSSYNPTAGHSSETASPSSKMNIPAPNKSYFS-MDMVDHDSMGETLWS 172
           R   +FP     P +  SS   SPSSK   P  NK  FS MD+VD  S+GE++WS
Sbjct: 121 RQSTNFPGHGLCPDSPSSS--GSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWS 171

[Close]

BLAST of Chy11G196040 vs. TAIR 10
Match: AT1G16530.1 (ASYMMETRIC LEAVES 2-like 9 )

HSP 1 Score: 183.3 bits (464), Expect = 1.6e-46
Identity = 97/170 (57.06%), Postives = 120/170 (70.59%), Query Frame = 0


Query: 6   GRKQGTSLSPCAACKLLRRRCAQD-CVFAPYFPADEPHKFASVHKVFGASNVNKMLQELP 65
           G + G ++SPCA CKLLRR+C +D CVFAPYFPA EP+KFA VHK+FGASNVNKMLQEL 
Sbjct: 5   GHRHGRTVSPCAGCKLLRRKCVKDSCVFAPYFPAKEPYKFAIVHKIFGASNVNKMLQELS 64

Query: 66  EQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHFP 125
           E  RSDAV SMVYEANAR++DPVYGCVG ISSL +Q++ LQTQLA AQAE++H+R  H  
Sbjct: 65  ENHRSDAVDSMVYEANARIQDPVYGCVGTISSLHRQLETLQTQLAFAQAELIHIRTLH-- 124

Query: 126 SSSYNPTAGHSSETASPSSKMNIPAPNKSYFS---MDMVDHDSMGETLWS 172
                    H+      +S +  P+ NK ++S   M +   D  G+ LWS
Sbjct: 125 -------RIHTKPPPYTASTVTFPS-NKDFYSDIDMAVAYTDDAGDFLWS 164

[Close]

BLAST of Chy11G196040 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 178.7 bits (452), Expect = 4.0e-45
Identity = 84/116 (72.41%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 10  GTSLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRS 69
           G   SPCA+CKLLRRRCA+DC+FAPYFP D+PHKFA VHKVFGASNV+KMLQELP  QR+
Sbjct: 3   GPGSSPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRA 62

Query: 70  DAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRHFPS 126
           DAV+S+V+EANARVRDPVYGCVGAIS LQ Q+  LQ QLA+AQAE++ ++M++ P+
Sbjct: 63  DAVNSLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQNEPT 118

[Close]

BLAST of Chy11G196040 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 159.5 bits (402), Expect = 2.5e-39
Identity = 81/153 (52.94%), Postives = 107/153 (69.93%), Query Frame = 0


Query: 12  SLSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRSDA 71
           +++PCAACKLLRRRCAQ+C F+PYF   EPHKFASVHKVFGASNV+KML E+PE QR+DA
Sbjct: 42  TITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPESQRADA 101

Query: 72  VSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMRH------FPS 131
            +S+VYEAN R+RDPVYGC+GAIS+LQQQ+  LQ +L   ++E++  + R        PS
Sbjct: 102 ANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREAVATLIVPS 161

Query: 132 SS----YNPTAGHSSETASPSSKMNIPAPNKSY 155
           +S    ++ + G S     P      P P  ++
Sbjct: 162 NSQVAGFHNSGGVSVIAPPPQRPTTPPQPTTAH 194

[Close]

BLAST of Chy11G196040 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 155.6 bits (392), Expect = 3.6e-38
Identity = 74/109 (67.89%), Postives = 88/109 (80.73%), Query Frame = 0


Query: 13  LSPCAACKLLRRRCAQDCVFAPYFPADEPHKFASVHKVFGASNVNKMLQELPEQQRSDAV 72
           LSPCAACK+LRRRCA+ CV APYFP  +P KF   H+VFGASN+ K LQELPE QR+DAV
Sbjct: 31  LSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAV 90

Query: 73  SSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHMRMR 122
           +SMVYEA AR+RDPVYGC GAI  LQ+Q+  LQ QLA AQ E+V+M+ +
Sbjct: 91  NSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQLAKAQVEMVNMQFQ 139

The following BLAST results are available for this feature:

BLAST of Chy11G196040 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SHE9	2.5e-60	73.14	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q9SA51	2.3e-45	57.06	LOB domain-containing protein 3 OS=Arabidopsis thaliana OX=3702 GN=LBD3 PE=2 SV=...	[more]
Q8LBW3	5.6e-44	72.41	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q8L5T5	3.5e-38	52.94	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]
Q9LQR0	5.1e-37	67.89	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]

BLAST of Chy11G196040 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBA8	5.8e-92	99.42	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G139130 PE=3 SV...	[more]
A0A5D3CBA3	8.3e-91	98.27	LOB domain-containing protein 4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1D8X3	2.9e-75	86.71	LOB domain-containing protein 4 OS=Momordica charantia OX=3673 GN=LOC111017996 P...	[more]
A0A6J1I1K8	1.1e-74	87.28	LOB domain-containing protein 4-like OS=Cucurbita maxima OX=3661 GN=LOC111469678...	[more]
A0A6J1G6E3	1.1e-74	87.28	LOB domain-containing protein 4-like OS=Cucurbita moschata OX=3662 GN=LOC1114512...	[more]

BLAST of Chy11G196040 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150042.1	7.74e-120	99.42	LOB domain-containing protein 4 [Cucumis sativus] >KGN46813.1 hypothetical prote...	[more]
KAA0054642.1	2.59e-118	98.27	LOB domain-containing protein 4-like [Cucumis melo var. makuwa] >TYK08620.1 LOB ...	[more]
XP_038902133.1	2.30e-112	94.22	LOB domain-containing protein 4-like [Benincasa hispida]	[more]
XP_022149611.1	4.13e-98	86.71	LOB domain-containing protein 4 [Momordica charantia]	[more]
XP_022947417.1	4.49e-97	87.28	LOB domain-containing protein 4-like [Cucurbita moschata] >XP_022970811.1 LOB do...	[more]

BLAST of Chy11G196040 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G31320.1	1.8e-61	73.14	LOB domain-containing protein 4	[more]
AT1G16530.1	1.6e-46	57.06	ASYMMETRIC LEAVES 2-like 9	[more]
AT2G30130.1	4.0e-45	72.41	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G40470.1	2.5e-39	52.94	LOB domain-containing protein 15	[more]
AT1G07900.1	3.6e-38	67.89	LOB domain-containing protein 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..147
None	No IPR available	PANTHER	PTHR31301:SF58	LOB DOMAIN-CONTAINING PROTEIN 3	coord: 3..168
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 3..168
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 15..112 e-value: 1.0E-43 score: 147.9
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 14..115 score: 27.38965

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G196040.1	Chy11G196040.1	mRNA