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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGGCAGCAGCTTGTGGTGCAGTTGTAAATTTGTACGGCGGCATTTGCAAGCTGTTGTGTTTAGATCTGGTAGTAATATTATTGCATTTGTTGCTATTATTTTGCAGCTAGCACCAATTATATCTTAGAATTTTCAACTTCTTAATTCTGGACAGCTCATCTCTGTGTTGCTTCACTCTTCTTTCTTCTACTGTCTCAACTACTTCTCTGTTTCTCTTTTAAGCCAATTGTGTAGCCTCAAGTTGGTTGGTTGGTTTGTTTTGTTGTTTGACTGGTCTTTGCTACACTCTGTTGTACATTTGTGAATACTGTGGACTTGTGTAATGATCAATTTATGGGCATTAACAATACTTAATGGAAAAGGAAAGGAAAGGAAAGGACACTGCTTCATAATTGCTTGCTCTTACTTTCTCCTGCAACAATTTAGTTTGCTCTTGTTTGCATTGCCATAATGGCGTTTACAGCTCAAGCTTAATCTTGAATGATGCTTTGTAA mRNA sequence ATGGCAGCAGCTTGTGGTGCAGTTGTAAATTTGTACGGCGGCATTTGCAAGCTGTTGTGTTTAGATCTGCTCATCTCTGTGTTGCTTCACTCTTCTTTCTTCTACTGTCTCAACTACTTCTCTGTTTCTCTTTTAAGCCAATTGTGTAGCCTCAAGTTGGTTGGTTGGTTTGTTTTGTTGTTTGACTGGTCTTTGCTACACTCTGTTGTACATTTGTGAATACTGTGGACTTGTGTAATGATCAATTTATGGGCATTAACAATACTTAATGGAAAAGGAAAGGAAAGGAAAGGACACTGCTTCATAATTGCTTGCTCTTACTTTCTCCTGCAACAATTTAGTTTGCTCTTGTTTGCATTGCCATAATGGCGTTTACAGCTCAAGCTTAATCTTGAATGATGCTTTGTAA Coding sequence (CDS) ATGGCAGCAGCTTGTGGTGCAGTTGTAAATTTGTACGGCGGCATTTGCAAGCTGTTGTGTTTAGATCTGCTCATCTCTGTGTTGCTTCACTCTTCTTTCTTCTACTGTCTCAACTACTTCTCTGTTTCTCTTTTAAGCCAATTGTGTAGCCTCAAGTTGGTTGGTTGGTTTGTTTTGTTGTTTGACTGGTCTTTGCTACACTCTGTTGTACATTTGTGAATACTGTGGACTTGTGTAATGATCAATTTATGGGCATTAACAATACTTAATGGAAAAGGAAAGGAAAGGAAAGGACACTGCTTCATAATTGCTTGCTCTTACTTTCTCCTGCAACAATTTAGTTTGCTCTTGTTTGCATTGCCATAATGGCGTTTACAGCTCAAGCTTAATCTTGAATGATGCTTTGTAA Protein sequence MAAACGAVVNLYGGICKLLCLDLLISVLLHSSFFYCLNYFSVSLLSQLCSLKLVGWFVLLFDWSLLHSVVHL*ILWTCVMINLWALTILNGKGKERKGHCFIIACSYFLLQQFSLLLFALP*WRLQLKLNLE*CFVX
Homology
BLAST of Chy11G195820 vs. ExPASy TrEMBL
Match: A0A0A0KC24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G179450 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.4e-40 Identity = 92/97 (94.85%), Postives = 92/97 (94.85%), Query Frame = 0
Query: 1 MAAACGAVVNLYGGICKLLCLDLLISVLLHSSFFYCLNYFSVSLLSQLCSLKLVGWFVLL 60
MAAACGAVVNLYGGICKLLCLDLLISVLLHSSFF CLNYFSVSLLSQLC LKLVGWFVLL
Sbjct: 1 MAAACGAVVNLYGGICKLLCLDLLISVLLHSSFFCCLNYFSVSLLSQLCILKLVGWFVLL 60
Query: 61 FDWSLLHSVVHL*ILWTCVMINLWAL-TILNGKGKER 97
FDWSLLHSVVHL ILWTCVMINLWAL TILNGK KER
Sbjct: 61 FDWSLLHSVVHLGILWTCVMINLWALTTILNGKEKER 97
BLAST of Chy11G195820 vs. NCBI nr
Match: KGN47038.1 (hypothetical protein Csa_020973 [Cucumis sativus]) HSP 1 Score: 174 bits (441), Expect = 3.20e-53 Identity = 92/97 (94.85%), Postives = 92/97 (94.85%), Query Frame = 0
Query: 1 MAAACGAVVNLYGGICKLLCLDLLISVLLHSSFFYCLNYFSVSLLSQLCSLKLVGWFVLL 60
MAAACGAVVNLYGGICKLLCLDLLISVLLHSSFF CLNYFSVSLLSQLC LKLVGWFVLL
Sbjct: 1 MAAACGAVVNLYGGICKLLCLDLLISVLLHSSFFCCLNYFSVSLLSQLCILKLVGWFVLL 60
Query: 61 FDWSLLHSVVHL*ILWTCVMINLWALT-ILNGKGKER 96
FDWSLLHSVVHL ILWTCVMINLWALT ILNGK KER
Sbjct: 61 FDWSLLHSVVHLGILWTCVMINLWALTTILNGKEKER 97
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A0A0KC24 | 2.4e-40 | 94.85 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G179450 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| KGN47038.1 | 3.20e-53 | 94.85 | hypothetical protein Csa_020973 [Cucumis sativus] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| cellular_component |
GO:0016021 |
integral component of membrane |
|
