Chy11G194830 (gene) Cucumber (hystrix) v1

Overview
NameChy11G194830
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionRibosomal protein
LocationchrH11: 12439844 .. 12443318 (+)
RNA-Seq ExpressionChy11G194830
SyntenyChy11G194830
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGGTATGTAGTTTTTATTCACCGTTCACATTCTGCTGTTTTTCAGAATGAATTTGATTATTGCTTCCGGCGTTTTTATCTAATTTGCAGATTCATAAAGTTTGTTCTTGTTATTTATTTTTGCCTGTAATCTAAATATTTGATTGAGGTAGATTTAGAAGTATGTAGATGGTAGTCCTGGAATTTTTTTAGGGTTGTAGTTTAATGGGTTTATGCTTGTTGGAGGCTTTGGTTGCTGATGGGTTTGTTGGTATTTACTGAATGTAGTTTTGTTGGTTTGTATGTGCAGCAAACTTCAGAGTGATGCGTTGAGAGAAGCCATTTCATCTATCTTTGCTGATAGCGGTGAAAAGAAGCGCAAATTCACTGAAACCATTGAACTTCAGATTGGACTGAAGAACTATGATCCCCAAAAGGACAAGCGTTTCAGTGGTTCAGTGAAGTTGCCACATATCCCTCGCCCTAAGATGAAGATCTGCATGCTTGGAGATGCTTCACACGTTGAAGAGGTAAACTTAATCTCCTCTTTTACACCTTCACTTAATCACATGTTATGCCCAGTTACTATTGTCCTTGTTTTTTCCCCCGTAGGGGAGATGATTACTAGTTTGTATGCTGCTTGCTTGTTCCGTTTTGTTCGATGATGTTTGATGAAATTTATGAAAAATCTCAATAGTTGGTATATTTGGATGAAGTTTATAGTTTGCAGGGACTTTTATTTGTGCATTAAAGTTTAATGGGTATGGTGTTGAATTCTTCATCCAAAGTATTTGTGAGTTTATACTCATCTTGGAAAATAATGTACTTTTTTGGCATTTCATGGATGGTAGTCCCAAATTAATTACTTTTTACACATACACTACAACTTTGTTCTTTTGCTGATGAATATGTGTATATGCTTATTATAGGCAGAGAAGATTGGTTTGGATTATATGGATGTTGAAGGTCTGAAGAAGCTAAACAAAAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAATACCATGCCTTTTTAGCATCTGAAGCTATTATCAAGCAAATTCCCCGTCTTCTGGGCCCTGGGCTCAACAAGGCAGGCAAGTGAGCTTATGACTAACAGACCTGGAATTTATCCTTGATCTCGGGACTCAAGTTAGAAAGTTTTTCTTAGCTCTATTGATTCTTATAAAAAAATTTCTCTCAGCTCAATTGGTTGTTTATAGTGGTGATGAATTGAATATATTTTTAACCTTTTACTTCATGATTTACTTTCTGTTTAAGTATAAGTTGTTTTAACTTTATACTTCATTTCTGACACTTAAATTTTGAATTTTAATCTATTTTCATTTTGTAGTTTGTACTAACATTGGCATTGAAATTTTGATTACAGGAAAGTTCCCTACCCTGGTCACTCACCAAGAATCTCTTGAATCTAAAGTAAATGAGACTAAGGCAATGGTTAAATTCCAATTGAAGAAGGTTCTTTGTATGGGTGTGGCCGTTGGCAATATTGCCATGGAAGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGCGTCAATTTCCTTGTTTCTTTGTTGAAAAAGAATTGGCAAAATGTAAGTCACGGGACATACTTTTCCTCCATGTTATTTTAGTCCGTAATCTTCTGTTTATGCAAGAAGCGTACTCCTAGGCACGTCTTATTTCATTTACTAACACGATTTATAATGCTGCTCAATACTCAATGAAGCATTGCTCTTTTATCTAATAATAATATACGATTTTATTGTTCTCATCAGGTGAGGTGCTTGTACCTGAAGAGTACAATGGGGAAGGCATATCGAGTCTTCTGAGGAATTTTCATAACCTAGATAGTTCTGTTTGTTCTTAAATCTTAAATCGAAGAAGTTGAGATAAGATTTCTATATTTATGATTGATGAAATTTTTCCTGTTTGTTTCCTTTTAGCAAACCATTAGCTGCACAATCGTCAACACTTGTGATGGGAGTAACGTGTTTTTTTGTTTCACTCTATATGTTCAGATTTTTGTTTTAATTTATTGTTTGATTGTTGCTTAGTTTCAATTAAAGAACATCTAATCAGTTTGTGCAGGGGCTTCCAGTTATTCAAAAGTAATGTTGTGCAAATTTTAAAATCGAATTTGGGATTAGGGATTCAGATCTACTGAACTTTGGATCGTATTTTGTTCAGAATTTATGGTGATCGTGAAATGAATTCCCAACTTTAATTAGAATGGACCTGTGTATGTTTTCTTAATTGGCTCTTAATTGGAGTTTCAGTTGCTTCTATGCACATTTGTTGCTTGCAAGTATTTCAGTTTATGGCGATTGTTTATTTGTGGGACCAATAATATGACCTTCTGTTCGTTCCTTATAAACCACTTTTGTTACTAATTTTCATTTTGGTCATTGGGACTTGGAATGTTGCTTTTTAATTTTAAATAGATTTCATAAATTTATGCATTTTTTAAAATTAATAATAAAGTCTTTCATCGATTTAACGATTATGACTTAGGTAAAAAAATGTTTTTTAAAAAAATCATTTTGTTTAAATATTTTTTTATAAAAAAAATATTAAACCTTTAGATTTTTTTTAAAATAAAAACTTATTTTTTAAATTAATTATTCGATAATGTAATTCAAACACCGTGAAGACTTAAAAAAAACCAAATGGTTACTTTTGATCAAATTAATTTATTAATTGATTTGCATTATAAATAAAGATTTATTTTAGGAAGAACCATGCTATTGGAGTCTCTATCGACTTTTATTTCATATTATTTGATTATTTTTTATTCATCCAACACTTTTTCGTGTTTTCTTTTTAAATTTAATGCTAGGAATAAGTGTATTTATAATCAATTCTACAAACTATTTACCTTTTATAAAGCACTAGTTAGAAAAACTATTTGTTTGGATTGGATTTTGAAAACTAATAAGAAAATAAGAAAATATAGAAATTTATAGAAGAAAATATAAACTCAATCTTAACAAATGAAACTCTGTTTGACATCTCTTTTAAAATTCTATAAGACAATCCTTTTCTATAGTTTAAGTTACCTTGCTCCTGAAAACGTATTAATTTTAAAAAATACGTTTTAAAAAATAAAGCCATTTTTAAAAATCTATAAGAACAATTTATTTTAGTTTGACATATTTTTTTCTTTCAATTCTTCAAAACACATAAGACTAAAACTGATATATTTTTTTTTAATATTTTATAAATATTTAGAAGAGTTTCATCATTTACAATCTCTCTATATTTTTAATAAATCTAAAATTTAGTTTTTAACGCTAATTAATTCATAGTTCATTATTTTAAAAACTTTGGTTATCTATAATGCTTTTAAACAACACAAAAATGTAAAAGCTTGAATTTAAGAATCAAGAGACAAATTATTTAATTACACGATAATTGGATACTTGGATGAAGCATAAATATTTTGTAAAATGTTATATTTAGACAAAATTTCATAATTTAACCTATATTTTTTAA

mRNA sequence

ATGAGCAAACTTCAGAGTGATGCGTTGAGAGAAGCCATTTCATCTATCTTTGCTGATAGCGGTGAAAAGAAGCGCAAATTCACTGAAACCATTGAACTTCAGATTGGACTGAAGAACTATGATCCCCAAAAGGACAAGCGTTTCAGTGGTTCAGTGAAGTTGCCACATATCCCTCGCCCTAAGATGAAGATCTGCATGCTTGGAGATGCTTCACACGTTGAAGAGGCAGAGAAGATTGGTTTGGATTATATGGATGTTGAAGGTCTGAAGAAGCTAAACAAAAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAATACCATGCCTTTTTAGCATCTGAAGCTATTATCAAGCAAATTCCCCGTCTTCTGGGCCCTGGGCTCAACAAGGCAGGAAAGTTCCCTACCCTGGTCACTCACCAAGAATCTCTTGAATCTAAAGTAAATGAGACTAAGGCAATGGTTAAATTCCAATTGAAGAAGGTTCTTTGTATGGGTGTGGCCGTTGGCAATATTGCCATGGAAGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGCGTCAATTTCCTTGTTTCTTTGTTGAAAAAGAATTGGCAAAATCAAACCATTAGCTGCACAATCGTCAACACTTGTGATGGGAGTAACACAAAATTTCATAATTTAACCTATATTTTTTAA

Coding sequence (CDS)

ATGAGCAAACTTCAGAGTGATGCGTTGAGAGAAGCCATTTCATCTATCTTTGCTGATAGCGGTGAAAAGAAGCGCAAATTCACTGAAACCATTGAACTTCAGATTGGACTGAAGAACTATGATCCCCAAAAGGACAAGCGTTTCAGTGGTTCAGTGAAGTTGCCACATATCCCTCGCCCTAAGATGAAGATCTGCATGCTTGGAGATGCTTCACACGTTGAAGAGGCAGAGAAGATTGGTTTGGATTATATGGATGTTGAAGGTCTGAAGAAGCTAAACAAAAACAAGAAGTTGGTGAAGAAACTTGCCAAGAAATACCATGCCTTTTTAGCATCTGAAGCTATTATCAAGCAAATTCCCCGTCTTCTGGGCCCTGGGCTCAACAAGGCAGGAAAGTTCCCTACCCTGGTCACTCACCAAGAATCTCTTGAATCTAAAGTAAATGAGACTAAGGCAATGGTTAAATTCCAATTGAAGAAGGTTCTTTGTATGGGTGTGGCCGTTGGCAATATTGCCATGGAAGAGAAGCAAGTTTTTCAGAACGTTCAAATGAGCGTCAATTTCCTTGTTTCTTTGTTGAAAAAGAATTGGCAAAATCAAACCATTAGCTGCACAATCGTCAACACTTGTGATGGGAGTAACACAAAATTTCATAATTTAACCTATATTTTTTAA

Protein sequence

MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQNVQMSVNFLVSLLKKNWQNQTISCTIVNTCDGSNTKFHNLTYIF*
Homology
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BLAST of Chy11G194830 vs. ExPASy Swiss-Prot
Match: B8B9K6 (60S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.7e-97
Identity = 180/212 (84.91%), Postives = 194/212 (91.51%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNQTISCTIVNTCDG 213
           N+QMSVNFLVSLLKKNWQN  + C  + +  G
Sbjct: 181 NIQMSVNFLVSLLKKNWQN--VRCLYIKSTMG 210

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BLAST of Chy11G194830 vs. ExPASy Swiss-Prot
Match: B7F845 (60S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE=1 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 5.7e-97
Identity = 180/212 (84.91%), Postives = 194/212 (91.51%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ L+EAIS +  +S EK RKFTET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEVLKEAISQVVGESKEKGRKFTETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMK+CMLGDA HVEEAEKIGLDYMDVE LKK+NKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKVCMLGDAQHVEEAEKIGLDYMDVEALKKMNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+ Q
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIQQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNQTISCTIVNTCDG 213
           N+QMSVNFLVSLLKKNWQN  + C  + +  G
Sbjct: 181 NIQMSVNFLVSLLKKNWQN--VRCLYIKSTMG 210

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BLAST of Chy11G194830 vs. ExPASy Swiss-Prot
Match: Q8VZB9 (60S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 2.0e-94
Identity = 176/199 (88.44%), Postives = 188/199 (94.47%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQN 200
           NVQMSVNFLVSLLKKNWQN
Sbjct: 181 NVQMSVNFLVSLLKKNWQN 199

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BLAST of Chy11G194830 vs. ExPASy Swiss-Prot
Match: P59231 (60S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.0e-93
Identity = 177/200 (88.50%), Postives = 188/200 (94.00%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAISSI     E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQI 120
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE++IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQN 200
           QNVQMSVNFLVSLLKKNWQN
Sbjct: 181 QNVQMSVNFLVSLLKKNWQN 200

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BLAST of Chy11G194830 vs. ExPASy Swiss-Prot
Match: P59230 (60S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 1.7e-93
Identity = 174/199 (87.44%), Postives = 187/199 (93.97%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQN 200
           NVQMSVNFLVSLLKKNWQN
Sbjct: 181 NVQMSVNFLVSLLKKNWQN 199

[Close]
BLAST of Chy11G194830 vs. ExPASy TrEMBL
Match: A0A0A0KEW8 (Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_6G152330 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQN 200
           NVQMSVNFLVSLLKKNWQN
Sbjct: 181 NVQMSVNFLVSLLKKNWQN 199

[Close]
BLAST of Chy11G194830 vs. ExPASy TrEMBL
Match: A0A1S3C7Q8 (Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103497946 PE=3 SV=1)

HSP 1 Score: 386.0 bits (990), Expect = 1.1e-103
Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQN 200
           NVQMSVNFLVSLLKKNWQN
Sbjct: 181 NVQMSVNFLVSLLKKNWQN 199

[Close]
BLAST of Chy11G194830 vs. ExPASy TrEMBL
Match: A0A6J1DHY4 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020664 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.0e-101
Identity = 193/199 (96.98%), Postives = 196/199 (98.49%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAIS+IF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQN 200
           NVQMSVNFLVSLLKKNWQN
Sbjct: 181 NVQMSVNFLVSLLKKNWQN 199

[Close]
BLAST of Chy11G194830 vs. ExPASy TrEMBL
Match: A0A6J1HYM1 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111469275 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.0e-101
Identity = 195/214 (91.12%), Postives = 202/214 (94.39%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAISSIF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNQTISCTIVNTCDGSN 215
           NVQMSVNFLVSLLKKNWQN  + C  + +  G +
Sbjct: 181 NVQMSVNFLVSLLKKNWQN--VRCLYLKSTMGKS 212

[Close]
BLAST of Chy11G194830 vs. ExPASy TrEMBL
Match: A0A6J1EVZ1 (Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111438515 PE=3 SV=1)

HSP 1 Score: 377.9 bits (969), Expect = 3.0e-101
Identity = 195/214 (91.12%), Postives = 202/214 (94.39%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAISSIF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNQTISCTIVNTCDGSN 215
           NVQMSVNFLVSLLKKNWQN  + C  + +  G +
Sbjct: 181 NVQMSVNFLVSLLKKNWQN--VRCLYLKSTMGKS 212

[Close]
BLAST of Chy11G194830 vs. NCBI nr
Match: XP_008458587.1 (PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >XP_011657068.1 60S ribosomal protein L10a [Cucumis sativus] >KGN46947.1 hypothetical protein Csa_021060 [Cucumis sativus])

HSP 1 Score: 383 bits (984), Expect = 3.21e-133
Identity = 201/212 (94.81%), Postives = 204/212 (96.23%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNQTISCTIVNTCDG 212
           NVQMSVNFLVSLLKKNWQN  + C  + +  G
Sbjct: 181 NVQMSVNFLVSLLKKNWQN--VRCLYLKSTMG 210

[Close]
BLAST of Chy11G194830 vs. NCBI nr
Match: XP_038893874.1 (60S ribosomal protein L10a [Benincasa hispida] >XP_038893875.1 60S ribosomal protein L10a [Benincasa hispida])

HSP 1 Score: 379 bits (972), Expect = 2.16e-131
Identity = 198/216 (91.67%), Postives = 204/216 (94.44%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAISSIF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP
Sbjct: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQE+LESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQETLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNQTISCTIVNTCDGSNTK 216
           NVQMSVNFLVSLLKKNWQN  + C  + +  G + +
Sbjct: 181 NVQMSVNFLVSLLKKNWQN--VRCLYLKSSMGKSYR 214

[Close]
BLAST of Chy11G194830 vs. NCBI nr
Match: XP_022932197.1 (60S ribosomal protein L10a-like [Cucurbita moschata] >XP_022970262.1 60S ribosomal protein L10a-like [Cucurbita maxima] >XP_023520953.1 60S ribosomal protein L10a-like [Cucurbita pepo subsp. pepo] >KAG6583662.1 60S ribosomal protein L10a, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019322.1 60S ribosomal protein L10a [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 375 bits (963), Expect = 5.09e-130
Identity = 195/216 (90.28%), Postives = 203/216 (93.98%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+ALREAISSIF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEALREAISSIFTDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNQTISCTIVNTCDGSNTK 216
           NVQMSVNFLVSLLKKNWQN  + C  + +  G + +
Sbjct: 181 NVQMSVNFLVSLLKKNWQN--VRCLYLKSTMGKSYR 214

[Close]
BLAST of Chy11G194830 vs. NCBI nr
Match: XP_022153072.1 (60S ribosomal protein L10a-like [Momordica charantia] >XP_022153073.1 60S ribosomal protein L10a-like [Momordica charantia])

HSP 1 Score: 375 bits (963), Expect = 5.09e-130
Identity = 195/212 (91.98%), Postives = 201/212 (94.81%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAIS+IF DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAISAIFVDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN+AMEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVAMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNQTISCTIVNTCDG 212
           NVQMSVNFLVSLLKKNWQN  + C  + +  G
Sbjct: 181 NVQMSVNFLVSLLKKNWQN--VRCLYLKSTMG 210

[Close]
BLAST of Chy11G194830 vs. NCBI nr
Match: XP_022142655.1 (60S ribosomal protein L10a [Momordica charantia] >XP_022142656.1 60S ribosomal protein L10a [Momordica charantia])

HSP 1 Score: 375 bits (962), Expect = 7.23e-130
Identity = 194/216 (89.81%), Postives = 204/216 (94.44%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQSDALREAI+SIF+DS EKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSDALREAITSIFSDSNEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEA+IKQIP
Sbjct: 61  KMKICMLGDALHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGN++MEEKQVFQ
Sbjct: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQVFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQNQTISCTIVNTCDGSNTK 216
           NVQMSVNFLVSLLKKNWQN  + C  + +  G + +
Sbjct: 181 NVQMSVNFLVSLLKKNWQN--VRCLYLKSTMGKSYR 214

[Close]
BLAST of Chy11G194830 vs. TAIR 10
Match: AT1G08360.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 346.7 bits (888), Expect = 1.4e-95
Identity = 176/199 (88.44%), Postives = 188/199 (94.47%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S  KKR F ETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTITGKSEAKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEK+GL+ MDVE LKKLNKNKKLVKKLAKKYHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLENMDVESLKKLNKNKKLVKKLAKKYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQN 200
           NVQMSVNFLVSLLKKNWQN
Sbjct: 181 NVQMSVNFLVSLLKKNWQN 199

[Close]
BLAST of Chy11G194830 vs. TAIR 10
Match: AT5G22440.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 344.4 bits (882), Expect = 7.1e-95
Identity = 177/200 (88.50%), Postives = 188/200 (94.00%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAISSI     E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQI 120
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE++IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQN 200
           QNVQMSVNFLVSLLKKNWQN
Sbjct: 181 QNVQMSVNFLVSLLKKNWQN 200

[Close]
BLAST of Chy11G194830 vs. TAIR 10
Match: AT5G22440.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 344.4 bits (882), Expect = 7.1e-95
Identity = 177/200 (88.50%), Postives = 188/200 (94.00%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGE-KKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPR 60
           MSKLQS+A+REAISSI     E K R FTETIELQIGLKNYDPQKDKRFSGSVKLPH+PR
Sbjct: 1   MSKLQSEAVREAISSIITHCKETKPRNFTETIELQIGLKNYDPQKDKRFSGSVKLPHVPR 60

Query: 61  PKMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQI 120
           PKMKICMLGDA HVEEAEKIGL+ MDVE LKKLNKNKKLVKKLAKK+HAFLASE++IKQI
Sbjct: 61  PKMKICMLGDAQHVEEAEKIGLESMDVEALKKLNKNKKLVKKLAKKFHAFLASESVIKQI 120

Query: 121 PRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVF 180
           PRLLGPGLNKAGKFPTLV+HQESLESKVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+F
Sbjct: 121 PRLLGPGLNKAGKFPTLVSHQESLESKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQIF 180

Query: 181 QNVQMSVNFLVSLLKKNWQN 200
           QNVQMSVNFLVSLLKKNWQN
Sbjct: 181 QNVQMSVNFLVSLLKKNWQN 200

[Close]
BLAST of Chy11G194830 vs. TAIR 10
Match: AT2G27530.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 343.6 bits (880), Expect = 1.2e-94
Identity = 174/199 (87.44%), Postives = 187/199 (93.97%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQN 200
           NVQMSVNFLVSLLKKNWQN
Sbjct: 181 NVQMSVNFLVSLLKKNWQN 199

[Close]
BLAST of Chy11G194830 vs. TAIR 10
Match: AT2G27530.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 343.6 bits (880), Expect = 1.2e-94
Identity = 174/199 (87.44%), Postives = 187/199 (93.97%), Query Frame = 0 

Query: 1   MSKLQSDALREAISSIFADSGEKKRKFTETIELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60
           MSKLQS+A+REAI++I   S EKKR F ET+ELQIGLKNYDPQKDKRFSGSVKLPHIPRP
Sbjct: 1   MSKLQSEAVREAITTIKGKSEEKKRNFVETVELQIGLKNYDPQKDKRFSGSVKLPHIPRP 60

Query: 61  KMKICMLGDASHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAIIKQIP 120
           KMKICMLGDA HVEEAEK+GL  MDVE LKKLNKNKKLVKKLAK YHAFLASE++IKQIP
Sbjct: 61  KMKICMLGDAQHVEEAEKMGLSNMDVEALKKLNKNKKLVKKLAKSYHAFLASESVIKQIP 120

Query: 121 RLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNIAMEEKQVFQ 180
           RLLGPGLNKAGKFPTLV+HQESLE+KVNETKA VKFQLKKVLCMGVAVGN++MEEKQ+FQ
Sbjct: 121 RLLGPGLNKAGKFPTLVSHQESLEAKVNETKATVKFQLKKVLCMGVAVGNLSMEEKQLFQ 180

Query: 181 NVQMSVNFLVSLLKKNWQN 200
           NVQMSVNFLVSLLKKNWQN
Sbjct: 181 NVQMSVNFLVSLLKKNWQN 199

The following BLAST results are available for this feature:
BLAST of Chy11G194830 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
B8B9K65.7e-9784.9160S ribosomal protein L10a OS=Oryza sativa subsp. indica OX=39946 GN=RPL10A PE=3... [more]
B7F8455.7e-9784.9160S ribosomal protein L10a OS=Oryza sativa subsp. japonica OX=39947 GN=RPL10A PE... [more]
Q8VZB92.0e-9488.4460S ribosomal protein L10a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL10AA PE=1 SV=... [more]
P592311.0e-9388.5060S ribosomal protein L10a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL10AC PE=1 SV=... [more]
P592301.7e-9387.4460S ribosomal protein L10a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL10AB PE=1 SV=... [more]
BLAST of Chy11G194830 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEW81.1e-103100.00Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_6G152330 PE=3 SV=1[more]
A0A1S3C7Q81.1e-103100.00Ribosomal protein OS=Cucumis melo OX=3656 GN=LOC103497946 PE=3 SV=1[more]
A0A6J1DHY43.0e-10196.98Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020664 PE=3 SV=1[more]
A0A6J1HYM13.0e-10191.12Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111469275 PE=3 SV=1[more]
A0A6J1EVZ13.0e-10191.12Ribosomal protein OS=Cucurbita moschata OX=3662 GN=LOC111438515 PE=3 SV=1[more]
BLAST of Chy11G194830 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008458587.13.21e-13394.81PREDICTED: 60S ribosomal protein L10a [Cucumis melo] >XP_011657068.1 60S ribosom... [more]
XP_038893874.12.16e-13191.6760S ribosomal protein L10a [Benincasa hispida] >XP_038893875.1 60S ribosomal pro... [more]
XP_022932197.15.09e-13090.2860S ribosomal protein L10a-like [Cucurbita moschata] >XP_022970262.1 60S ribosom... [more]
XP_022153072.15.09e-13091.9860S ribosomal protein L10a-like [Momordica charantia] >XP_022153073.1 60S riboso... [more]
XP_022142655.17.23e-13089.8160S ribosomal protein L10a [Momordica charantia] >XP_022142656.1 60S ribosomal p... [more]
BLAST of Chy11G194830 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G08360.11.4e-9588.44Ribosomal protein L1p/L10e family [more]
AT5G22440.17.1e-9588.50Ribosomal protein L1p/L10e family [more]
AT5G22440.27.1e-9588.50Ribosomal protein L1p/L10e family [more]
AT2G27530.11.2e-9487.44Ribosomal protein L1p/L10e family [more]
AT2G27530.21.2e-9487.44Ribosomal protein L1p/L10e family [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinPFAMPF00687Ribosomal_L1coord: 23..199
e-value: 1.6E-38
score: 132.5
IPR028364Ribosomal protein L1/ribosomal biogenesis proteinCDDcd00403Ribosomal_L1coord: 9..199
e-value: 2.10915E-54
score: 171.213
NoneNo IPR availableGENE3D3.30.190.20coord: 20..205
e-value: 3.2E-57
score: 195.2
NoneNo IPR availablePANTHERPTHR23105RIBOSOMAL PROTEIN L7AE FAMILY MEMBERcoord: 2..202
NoneNo IPR availablePANTHERPTHR23105:SF16460S RIBOSOMAL PROTEIN L10A-3coord: 2..202
IPR016095Ribosomal protein L1, 3-layer alpha/beta-sandwichGENE3D3.40.50.790coord: 65..154
e-value: 3.2E-57
score: 195.2
IPR002143Ribosomal protein L1PIRSFPIRSF002155RPL1p_RPL1a_RPL10e_RPL1ocoord: 1..214
e-value: 5.3E-42
score: 141.6
IPR023673Ribosomal protein L1, conserved sitePROSITEPS01199RIBOSOMAL_L1coord: 116..135
IPR023674Ribosomal protein L1-likeSUPERFAMILY56808Ribosomal protein L1coord: 22..199

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy11G194830.1Chy11G194830.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0000470 maturation of LSU-rRNA
biological_process GO:0006412 translation
cellular_component GO:0022625 cytosolic large ribosomal subunit
cellular_component GO:0015934 large ribosomal subunit
molecular_function GO:0003723 RNA binding
molecular_function GO:0003735 structural constituent of ribosome