Chy11G194580 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCGAACCCTAGGTCTCACAGGAAGGGGAAGCTTGCGGAGAAGTCGTCTTCGTTCCATGGAGAGAGTCCGACTAAGACGGCAGCGATGCTTCGGAGGCCGAAGACGGATCCGGAATTGTTGTCTTTCAAGAATCTAGGTTTATCGGCGTCGGCGCCGTCGCTGGATGGACGACCGAGGATGACGAAATTACTCCTCAACGTGACGATTCAGGGAAGTTTAGGTCCAGTACAGGTGTTGATGTCGCCGGAGATGACCGTGGCTGATCTTGTATCGGCGACCGTTCGTCAATACTTGAAAGAAGGCCGCCGGCCGATTTTGCCTACTGCAGATCCTTCTGCTTTCGATCTTCATTACTCGCAATTCAGCTTAGAAAGTAAGCAATAATCGATTGACAAAACTCTCGTAACTGCTTTCGATTTTGAATGAAGTTTCAATCGGTTGTGAATTTCGCGGGCGATTCTAATGAGATAGTGATTTGAATCTCAGGTTTAAACAAGGAAGAGAAGCTGATCGCCTTGGGATCTAGAAACTTCTTTCTGTGTCCTAGAAAGTCAGACGATAACAACGATTTAATCGCTTCTTCTTCATCTTCTTCGTGCTCGAAAGAAGCTAAAGAAAGCGCGAAGAGTTCCAGCAGTTTCAGTTGGTTCAAATTCATCGATTTCCGGATTTAG ATGCCGAACCCTAGGTCTCACAGGAAGGGGAAGCTTGCGGAGAAGTCGTCTTCGTTCCATGGAGAGAGTCCGACTAAGACGGCAGCGATGCTTCGGAGGCCGAAGACGGATCCGGAATTGTTGTCTTTCAAGAATCTAGGTTTATCGGCGTCGGCGCCGTCGCTGGATGGACGACCGAGGATGACGAAATTACTCCTCAACGTGACGATTCAGGGAAGTTTAGGTCCAGTACAGGTGTTGATGTCGCCGGAGATGACCGTGGCTGATCTTGTATCGGCGACCGTTCGTCAATACTTGAAAGAAGGCCGCCGGCCGATTTTGCCTACTGCAGATCCTTCTGCTTTCGATCTTCATTACTCGCAATTCAGCTTAGAAAGTTTAAACAAGGAAGAGAAGCTGATCGCCTTGGGATCTAGAAACTTCTTTCTGTGTCCTAGAAAGTCAGACGATAACAACGATTTAATCGCTTCTTCTTCATCTTCTTCGTGCTCGAAAGAAGCTAAAGAAAGCGCGAAGAGTTCCAGCAGTTTCAGTTGGTTCAAATTCATCGATTTCCGGATTTAG ATGCCGAACCCTAGGTCTCACAGGAAGGGGAAGCTTGCGGAGAAGTCGTCTTCGTTCCATGGAGAGAGTCCGACTAAGACGGCAGCGATGCTTCGGAGGCCGAAGACGGATCCGGAATTGTTGTCTTTCAAGAATCTAGGTTTATCGGCGTCGGCGCCGTCGCTGGATGGACGACCGAGGATGACGAAATTACTCCTCAACGTGACGATTCAGGGAAGTTTAGGTCCAGTACAGGTGTTGATGTCGCCGGAGATGACCGTGGCTGATCTTGTATCGGCGACCGTTCGTCAATACTTGAAAGAAGGCCGCCGGCCGATTTTGCCTACTGCAGATCCTTCTGCTTTCGATCTTCATTACTCGCAATTCAGCTTAGAAAGTTTAAACAAGGAAGAGAAGCTGATCGCCTTGGGATCTAGAAACTTCTTTCTGTGTCCTAGAAAGTCAGACGATAACAACGATTTAATCGCTTCTTCTTCATCTTCTTCGTGCTCGAAAGAAGCTAAAGAAAGCGCGAAGAGTTCCAGCAGTTTCAGTTGGTTCAAATTCATCGATTTCCGGATTTAG MPNPRSHRKGKLAEKSSSFHGESPTKTAAMLRRPKTDPELLSFKNLGLSASAPSLDGRPRMTKLLLNVTIQGSLGPVQVLMSPEMTVADLVSATVRQYLKEGRRPILPTADPSAFDLHYSQFSLESLNKEEKLIALGSRNFFLCPRKSDDNNDLIASSSSSSCSKEAKESAKSSSSFSWFKFIDFRI* Homology
BLAST of Chy11G194580 vs. ExPASy Swiss-Prot
Match: Q56XJ7 (Uncharacterized protein At4g22758 OS=Arabidopsis thaliana OX=3702 GN=At4g22758 PE=2 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.3e-09 Identity = 47/152 (30.92%), Postives = 75/152 (49.34%), Query Frame = 0
BLAST of Chy11G194580 vs. ExPASy TrEMBL
Match: A0A0A0KES9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G150560 PE=4 SV=1) HSP 1 Score: 351.3 bits (900), Expect = 2.5e-93 Identity = 183/187 (97.86%), Postives = 185/187 (98.93%), Query Frame = 0
BLAST of Chy11G194580 vs. ExPASy TrEMBL
Match: A0A5A7SQA1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold111G00230 PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 3.1e-91 Identity = 182/188 (96.81%), Postives = 183/188 (97.34%), Query Frame = 0
BLAST of Chy11G194580 vs. ExPASy TrEMBL
Match: A0A1S3C8V7 (uncharacterized protein At4g22758 OS=Cucumis melo OX=3656 GN=LOC103497975 PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 3.1e-91 Identity = 182/188 (96.81%), Postives = 183/188 (97.34%), Query Frame = 0
BLAST of Chy11G194580 vs. ExPASy TrEMBL
Match: A0A6J1H539 (uncharacterized protein At4g22758 OS=Cucurbita moschata OX=3662 GN=LOC111459661 PE=4 SV=1) HSP 1 Score: 319.7 bits (818), Expect = 8.1e-84 Identity = 165/187 (88.24%), Postives = 178/187 (95.19%), Query Frame = 0
BLAST of Chy11G194580 vs. ExPASy TrEMBL
Match: A0A6J1K3Z9 (uncharacterized protein At4g22758-like OS=Cucurbita maxima OX=3661 GN=LOC111491488 PE=4 SV=1) HSP 1 Score: 318.5 bits (815), Expect = 1.8e-83 Identity = 165/187 (88.24%), Postives = 178/187 (95.19%), Query Frame = 0
BLAST of Chy11G194580 vs. NCBI nr
Match: XP_004145782.1 (uncharacterized protein At4g22758 [Cucumis sativus] >KGN46917.1 hypothetical protein Csa_020746 [Cucumis sativus]) HSP 1 Score: 354 bits (909), Expect = 6.98e-123 Identity = 183/187 (97.86%), Postives = 185/187 (98.93%), Query Frame = 0
BLAST of Chy11G194580 vs. NCBI nr
Match: XP_008458628.1 (PREDICTED: uncharacterized protein At4g22758 [Cucumis melo] >KAA0033374.1 uncharacterized protein E6C27_scaffold111G00230 [Cucumis melo var. makuwa]) HSP 1 Score: 347 bits (891), Expect = 4.01e-120 Identity = 182/188 (96.81%), Postives = 183/188 (97.34%), Query Frame = 0
BLAST of Chy11G194580 vs. NCBI nr
Match: XP_038902782.1 (uncharacterized protein At4g22758 [Benincasa hispida]) HSP 1 Score: 330 bits (845), Expect = 3.59e-113 Identity = 173/187 (92.51%), Postives = 179/187 (95.72%), Query Frame = 0
BLAST of Chy11G194580 vs. NCBI nr
Match: KAG6606010.1 (hypothetical protein SDJN03_03327, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035960.1 hypothetical protein SDJN02_02760, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 323 bits (827), Expect = 2.06e-110 Identity = 165/187 (88.24%), Postives = 177/187 (94.65%), Query Frame = 0
BLAST of Chy11G194580 vs. NCBI nr
Match: XP_022958439.1 (uncharacterized protein At4g22758 [Cucurbita moschata]) HSP 1 Score: 323 bits (827), Expect = 2.06e-110 Identity = 165/187 (88.24%), Postives = 178/187 (95.19%), Query Frame = 0
BLAST of Chy11G194580 vs. TAIR 10
Match: AT2G27830.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G22758.1); Has 131 Blast hits to 131 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 131; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 179.1 bits (453), Expect = 3.3e-45 Identity = 105/184 (57.07%), Postives = 133/184 (72.28%), Query Frame = 0
BLAST of Chy11G194580 vs. TAIR 10
Match: AT4G22758.1 (unknown protein; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G27830.1). ) HSP 1 Score: 64.7 bits (156), Expect = 9.1e-11 Identity = 47/152 (30.92%), Postives = 75/152 (49.34%), Query Frame = 0
BLAST of Chy11G194580 vs. TAIR 10
Match: AT5G37730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G23150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 50.4 bits (119), Expect = 1.8e-06 Identity = 24/85 (28.24%), Postives = 50/85 (58.82%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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