Chy11G193910 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G193910
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	CASP-like protein
Location	chrH11: 11634471 .. 11635574 (-)
RNA-Seq Expression	Chy11G193910
Synteny	Chy11G193910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGGGAGTCCTGGGTCAGTTCATCCGGTGGAAGAAATTCCGACGACCGATGTCGGAGACGCTGCGCCGGTAATCAGAATGAAGGACATAGAAGGCATGCCCGGTACTCGCGGTGGTCTCGCTCTTCGTTGCATCCAATTAGGGTTCGCCGTTGCTGCCTTTTCTGTCATGGCCGCCTCCCGCGACTTTTCTTCCGTTTCTGCATTTAGGTGATTTTTCATTCACTCGATCAATTTCATTTTCCCCTCTAATTCCGTCGAATTCTTATTCTAACTCGTTTGATAGCACAAAGAAGTTTCAAACTCGGCCTTGCAAGGCAGTTCCCACATGAATTTCAGTTTTCGCCACTTGCATCCATAGAATCCCTTAAATCTAACCCGCTACTAAATTTCCTGTAATTACGTAGTTAATTTCTACATGCGATCGCTGTTGTGAAGAACATTCACGATACTGATACACTGTACGTTTATCTTTGCATCAGCTACCTTGTCGCAGCTGCCAGTTTACAGGGTGTTTGGAGTTTTGCCCTAGCAATTATTGACATTTATGCTCTGTTAGTAAAGCGAACCTTGCAAAATCGCTCAATTGTTAGCTTTTTTGCTGTAGGCGATGGGGTAAGTCCATTCATTAAAACCAATTGGCTTGTTGAAATGCTCTTATAATCTACTTCCGTTTGTCCATTTTGAACTAATCCTGCATCAATTATTTCTTACCATGTCTGTTCCATCAGTAATAATACAAGTAAGATGCTGAAAAGAAAAGCTACCAATTACCAATGTTTTAAGTTGAATCCGCTGACCCATGTTGATAAACTTTATCATTATTGCCATCATCAAATTTTGAGTATAAGGGGGTTGCTATGTTGGCTACAAACAGTGAAATAGTTGCTTCTCTTGTCTCTTCCTACAGATCACTACCACGCTCACATTTGCTGCAGCATGTGCTTGTGCAGGCATCACAGTTCTAATAGACAATGACCTTGACCTTTGTTCTGTGAATAAATGTGTACAGCTTCAATCTGCAACTGCAATGGCATTCCTTTGCTGGTTCACTACATTGCCTTCCTTTTTCTTCAACTACTGGTCACTCGCGTCGCGATAG

mRNA sequence

ATGAACGGGAGTCCTGGGTCAGTTCATCCGGTGGAAGAAATTCCGACGACCGATGTCGGAGACGCTGCGCCGGTAATCAGAATGAAGGACATAGAAGGCATGCCCGGTACTCGCGGTGGTCTCGCTCTTCGTTGCATCCAATTAGGGTTCGCCGTTGCTGCCTTTTCTGTCATGGCCGCCTCCCGCGACTTTTCTTCCGTTTCTGCATTTAGCTACCTTGTCGCAGCTGCCAGTTTACAGGGTGTTTGGAGTTTTGCCCTAGCAATTATTGACATTTATGCTCTGTTAGTAAAGCGAACCTTGCAAAATCGCTCAATTGTTAGCTTTTTTGCTGTAGGCGATGGGATCACTACCACGCTCACATTTGCTGCAGCATGTGCTTGTGCAGGCATCACAGTTCTAATAGACAATGACCTTGACCTTTGTTCTGTGAATAAATGTGTACAGCTTCAATCTGCAACTGCAATGGCATTCCTTTGCTGGTTCACTACATTGCCTTCCTTTTTCTTCAACTACTGGTCACTCGCGTCGCGATAG

Coding sequence (CDS)

ATGAACGGGAGTCCTGGGTCAGTTCATCCGGTGGAAGAAATTCCGACGACCGATGTCGGAGACGCTGCGCCGGTAATCAGAATGAAGGACATAGAAGGCATGCCCGGTACTCGCGGTGGTCTCGCTCTTCGTTGCATCCAATTAGGGTTCGCCGTTGCTGCCTTTTCTGTCATGGCCGCCTCCCGCGACTTTTCTTCCGTTTCTGCATTTAGCTACCTTGTCGCAGCTGCCAGTTTACAGGGTGTTTGGAGTTTTGCCCTAGCAATTATTGACATTTATGCTCTGTTAGTAAAGCGAACCTTGCAAAATCGCTCAATTGTTAGCTTTTTTGCTGTAGGCGATGGGATCACTACCACGCTCACATTTGCTGCAGCATGTGCTTGTGCAGGCATCACAGTTCTAATAGACAATGACCTTGACCTTTGTTCTGTGAATAAATGTGTACAGCTTCAATCTGCAACTGCAATGGCATTCCTTTGCTGGTTCACTACATTGCCTTCCTTTTTCTTCAACTACTGGTCACTCGCGTCGCGATAG

Protein sequence

MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAASRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTLTFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR*

Homology

[Close]

BLAST of Chy11G193910 vs. ExPASy Swiss-Prot
Match: Q9SKN3 (CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 7.3e-55
Identity = 114/180 (63.33%), Postives = 141/180 (78.33%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIP--TTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVM 60
           MN S  SVHPVE+ P   T+V +  P +RM D+EGMPGT  GLALR  Q  FA AA  VM
Sbjct: 1   MNVSHASVHPVEDPPAAATEV-ENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVM 60

Query: 61  AASRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITT 120
           A++ DF SV+AF YLVAA  LQ +WS ALA++D+YA++VKR+LQNR +VS FA+GDG+T+
Sbjct: 61  ASTSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTS 120

Query: 121 TLTFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TLTFAAACA AGITVLIDNDL+ C+ N CVQ +++TA+AF+ WF  LPSF FN+WSLASR
Sbjct: 121 TLTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of Chy11G193910 vs. ExPASy Swiss-Prot
Match: Q10Q78 (CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 PE=2 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 2.2e-51
Identity = 108/177 (61.02%), Postives = 128/177 (72.32%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60
           M  S  +VHPVE  P  D  +    + MKD+ GMPGT GGL LR  Q  FA  A +VMA+
Sbjct: 1   MFASRPAVHPVEAPPPPDPAEQPRGVLMKDLPGMPGTAGGLGLRLAQFAFAAVALAVMAS 60

Query: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTL 120
           + DF SV++F +LVAAA LQ +WSF+LAI+DIYALLVKR L+NR  V  FA+GDGIT  L
Sbjct: 61  TNDFPSVTSFCFLVAAAILQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLAS 178
           TF+AACA +GITVLIDNDLDLCS N C   +SATAMAFL WF   PSF  N+WS+AS
Sbjct: 121 TFSAACASSGITVLIDNDLDLCSENHCASFESATAMAFLSWFALSPSFLLNFWSMAS 177

[Close]

BLAST of Chy11G193910 vs. ExPASy Swiss-Prot
Match: P0DI70 (CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.1e-50
Identity = 113/178 (63.48%), Postives = 131/178 (73.60%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60
           MN S  +VHPV E P TDV   AP +RMKD +GMPGT GGLALR  Q  FAV AFS+M +
Sbjct: 1   MNPSHPAVHPV-EAPPTDV-HHAPRVRMKDYQGMPGTLGGLALRLGQFCFAVVAFSIMLS 60

Query: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTL 120
           + DFS+V+AF YLVAA  LQ +WS ALA+ID YALLVKR+L+N  +VS F VGDG+T TL
Sbjct: 61  TDDFSTVTAFCYLVAATVLQCLWSLALAVIDGYALLVKRSLRNSLVVSLFVVGDGVTATL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACA AGITVLI NDL  C  N C + ++ATAMAFL WF   PSF   +W LASR
Sbjct: 121 TFAAACASAGITVLIGNDLRECDQNHCGKYETATAMAFLSWFMVSPSFLLTFWLLASR 176

[Close]

BLAST of Chy11G193910 vs. ExPASy Swiss-Prot
Match: P0DI68 (CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 6.0e-49
Identity = 103/178 (57.87%), Postives = 128/178 (71.91%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60
           M  S  +VHPVE  P TD  +    + MKD+ GMPGT GGL LR  Q  FA  A +VMA+
Sbjct: 1   MFASRPAVHPVEAPPPTDPVEQPTGVLMKDLPGMPGTAGGLGLRVAQFVFAGVALAVMAS 60

Query: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTL 120
           + DF SV+AF YLVAA  +Q +WSF+LAI+DIYALLVKR L+NR  V  FA+GDGIT  L
Sbjct: 61  TSDFPSVTAFCYLVAATIMQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAAL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TF AAC+ AGITVLIDNDL++C+ N C   ++ATA+AF+ WF   PSF  N+WS+A+R
Sbjct: 121 TFGAACSSAGITVLIDNDLNICAENHCGSFKTATALAFMSWFALTPSFLLNFWSMAAR 178

[Close]

BLAST of Chy11G193910 vs. ExPASy Swiss-Prot
Match: P0DI69 (CASP-like protein 5A2 OS=Ginkgo biloba OX=3311 GN=gba_locus_19756 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-45
Identity = 103/178 (57.87%), Postives = 125/178 (70.22%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60
           MN S  +VHPV  +P    G   P +RMK+I+GMPGT GGL LR  Q  FA+ AFS+M +
Sbjct: 1   MNASHPAVHPV-GVPPAVAGQLPPRMRMKEIQGMPGTIGGLLLRLGQFCFALVAFSIMVS 60

Query: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTL 120
             +FS+V+AF YLVAA  LQ +WS ALAIID YALLVKR+L+N  +VS   VGDG+T TL
Sbjct: 61  IENFSTVTAFCYLVAATVLQCLWSLALAIIDGYALLVKRSLRNSLLVSLLVVGDGVTATL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACA AGITVLI NDL  C  N C + ++ATA+AFL WF    SF   +W LA+R
Sbjct: 121 TFAAACASAGITVLIGNDLRQCKENHCARYETATALAFLSWFMVSLSFILTFWLLATR 177

[Close]

BLAST of Chy11G193910 vs. ExPASy TrEMBL
Match: A0A0A0KAS5 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G141370 PE=3 SV=1)

HSP 1 Score: 336.3 bits (861), Expect = 8.0e-89
Identity = 175/178 (98.31%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60
           MNGS GSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFA+AAFSVMAA
Sbjct: 1   MNGSHGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAIAAFSVMAA 60

Query: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTL 120
           SRDFSSVSAFSYLVAAASLQGVWSFALAIID YALLVKRTLQNRSIVSFFAVGDGITTTL
Sbjct: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDTYALLVKRTLQNRSIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178

[Close]

BLAST of Chy11G193910 vs. ExPASy TrEMBL
Match: A0A1S3CKE0 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501951 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87
Identity = 173/178 (97.19%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60
           MNGS GSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA
Sbjct: 1   MNGSHGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60

Query: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTL 120
           SRDF SVSAFSYLVAAASLQG+WSFALAIIDIYALLVKRTLQNR IVSFFAVGDGITTTL
Sbjct: 61  SRDFPSVSAFSYLVAAASLQGLWSFALAIIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKC QLQSATAMAFLCWFTTLPSFFFNYWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCAQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178

[Close]

BLAST of Chy11G193910 vs. ExPASy TrEMBL
Match: A0A5D3CR88 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00140 PE=3 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.5e-87
Identity = 173/178 (97.19%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60
           MNGS GSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA
Sbjct: 1   MNGSHGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60

Query: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTL 120
           SRDF SVSAFSYLVAAASLQG+WSFALAIIDIYALLVKRTLQNR IVSFFAVGDGITTTL
Sbjct: 61  SRDFPSVSAFSYLVAAASLQGLWSFALAIIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKC QLQSATAMAFLCWFTTLPSFFFNYWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCAQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178

[Close]

BLAST of Chy11G193910 vs. ExPASy TrEMBL
Match: A0A6J1FWR8 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111448134 PE=3 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 5.4e-77
Identity = 151/178 (84.83%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60
           M+ S  SVHPVEE P TDVGD AP++ MK+IEGMPGTRGGLALRC QLGFA AAF VMAA
Sbjct: 1   MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAA 60

Query: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTL 120
           S DF+SVSAFSYLVAAA LQG+WSF LA++DIYALLVKR L NR IV+FFAVGDGITTTL
Sbjct: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCW TTLPSFFFN+WSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 178

[Close]

BLAST of Chy11G193910 vs. ExPASy TrEMBL
Match: A0A6J1JE54 (CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111483628 PE=3 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 9.2e-77
Identity = 150/178 (84.27%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60
           M+ S  S+HPVEE P TDVGD AP++ MK+IEGMPGTRGGLALRC QLGFA AAF +MAA
Sbjct: 1   MSASSASIHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFASAAFGIMAA 60

Query: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTL 120
           S DF+SVSAFSYLVAAA LQG+WSF LA+IDIYALLVKR L NR IV+FFAVGDGITTTL
Sbjct: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCW TTLPSFFFN+WSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 178

[Close]

BLAST of Chy11G193910 vs. NCBI nr
Match: XP_004145743.1 (CASP-like protein 5A2 [Cucumis sativus] >KGN46840.1 hypothetical protein Csa_020761 [Cucumis sativus])

HSP 1 Score: 337 bits (865), Expect = 1.80e-116
Identity = 175/178 (98.31%), Postives = 176/178 (98.88%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60
           MNGS GSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFA+AAFSVMAA
Sbjct: 1   MNGSHGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAIAAFSVMAA 60

Query: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTL 120
           SRDFSSVSAFSYLVAAASLQGVWSFALAIID YALLVKRTLQNRSIVSFFAVGDGITTTL
Sbjct: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDTYALLVKRTLQNRSIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178

[Close]

BLAST of Chy11G193910 vs. NCBI nr
Match: XP_008463948.1 (PREDICTED: CASP-like protein 5A2 [Cucumis melo] >XP_008463949.1 PREDICTED: CASP-like protein 5A2 [Cucumis melo] >KAA0035346.1 CASP-like protein 5A2 [Cucumis melo var. makuwa] >TYK14291.1 CASP-like protein 5A2 [Cucumis melo var. makuwa])

HSP 1 Score: 333 bits (854), Expect = 8.57e-115
Identity = 173/178 (97.19%), Postives = 174/178 (97.75%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60
           MNGS GSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA
Sbjct: 1   MNGSHGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60

Query: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTL 120
           SRDF SVSAFSYLVAAASLQG+WSFALAIIDIYALLVKRTLQNR IVSFFAVGDGITTTL
Sbjct: 61  SRDFPSVSAFSYLVAAASLQGLWSFALAIIDIYALLVKRTLQNRPIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178
           TFAAACACAGITVLIDNDLDLCSVNKC QLQSATAMAFLCWFTTLPSFFFNYWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCAQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178

[Close]

BLAST of Chy11G193910 vs. NCBI nr
Match: XP_038900719.1 (CASP-like protein 5A2 [Benincasa hispida])

HSP 1 Score: 316 bits (809), Expect = 6.21e-108
Identity = 162/178 (91.01%), Postives = 169/178 (94.94%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60
           MNGS GSVHPVEE PTTDVGD AP++RMKDIEGMPGTRGGLALR IQLGFAVAAF++MAA
Sbjct: 1   MNGSHGSVHPVEETPTTDVGDVAPMVRMKDIEGMPGTRGGLALRGIQLGFAVAAFAIMAA 60

Query: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTL 120
           S DF SVSAFSYLVAAASLQG+WSFALA+IDIYALLVKRTL NR IVSFFAVGDGITTTL
Sbjct: 61  SSDFPSVSAFSYLVAAASLQGLWSFALAVIDIYALLVKRTLHNRPIVSFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178
           TFAAACACAGITVLIDNDLDLCSVNKCVQ QSATAMAFLCWF+TLPSFFFNYWSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQFQSATAMAFLCWFSTLPSFFFNYWSLASR 178

[Close]

BLAST of Chy11G193910 vs. NCBI nr
Match: XP_023512454.1 (CASP-like protein 5A2 [Cucurbita pepo subsp. pepo] >KAG6570784.1 CASP-like protein 5A2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010631.1 CASP-like protein 5A2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 299 bits (765), Expect = 3.16e-101
Identity = 152/178 (85.39%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60
           M+ S  SVHPVEE P TDVGD AP++ MK+IEGMPGTRGGLALRC QLGFA AAF VMAA
Sbjct: 1   MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAA 60

Query: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTL 120
           S DF+SVSAFSYLVAAA LQG+WSF LA+IDIYALLVKR L NR IV+FFAVGDGITTTL
Sbjct: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVIDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCW TTLPSFFFN+WSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 178

[Close]

BLAST of Chy11G193910 vs. NCBI nr
Match: XP_022943338.1 (CASP-like protein 5A2 [Cucurbita moschata])

HSP 1 Score: 298 bits (763), Expect = 6.37e-101
Identity = 151/178 (84.83%), Postives = 161/178 (90.45%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAA 60
           M+ S  SVHPVEE P TDVGD AP++ MK+IEGMPGTRGGLALRC QLGFA AAF VMAA
Sbjct: 1   MSASSASVHPVEETPATDVGDVAPIVSMKNIEGMPGTRGGLALRCFQLGFAAAAFGVMAA 60

Query: 61  SRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITTTL 120
           S DF+SVSAFSYLVAAA LQG+WSF LA++DIYALLVKR L NR IV+FFAVGDGITTTL
Sbjct: 61  SSDFASVSAFSYLVAAAGLQGLWSFFLAVLDIYALLVKRNLHNRPIVTFFAVGDGITTTL 120

Query: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 178
           TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCW TTLPSFFFN+WSLASR
Sbjct: 121 TFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWLTTLPSFFFNFWSLASR 178

[Close]

BLAST of Chy11G193910 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 214.9 bits (546), Expect = 5.2e-56
Identity = 114/180 (63.33%), Postives = 141/180 (78.33%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIP--TTDVGDAAPVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVM 60
           MN S  SVHPVE+ P   T+V +  P +RM D+EGMPGT  GLALR  Q  FA AA  VM
Sbjct: 1   MNVSHASVHPVEDPPAAATEV-ENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVM 60

Query: 61  AASRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITT 120
           A++ DF SV+AF YLVAA  LQ +WS ALA++D+YA++VKR+LQNR +VS FA+GDG+T+
Sbjct: 61  ASTSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTS 120

Query: 121 TLTFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLASR 179
           TLTFAAACA AGITVLIDNDL+ C+ N CVQ +++TA+AF+ WF  LPSF FN+WSLASR
Sbjct: 121 TLTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of Chy11G193910 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 179.1 bits (453), Expect = 3.1e-45
Identity = 98/179 (54.75%), Postives = 125/179 (69.83%), Query Frame = 0


Query: 1   MNGSPGSVHPVEEIPTTDVGDA--APVIRMKDIEGMPGTRGGLALRCIQLGFAVAAFSVM 60
           MN S  ++HPV+ +P      A   P +RMKD++GMPGT GGL LR  Q   A+ + SVM
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAIDRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVM 61

Query: 61  AASRDFSSVSAFSYLVAAASLQGVWSFALAIIDIYALLVKRTLQNRSIVSFFAVGDGITT 120
             + DF S +AF  LV A SLQ +WS +L IID YALLV+R+L+N S+V  F +GDG+T+
Sbjct: 62  VTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTS 121

Query: 121 TLTFAAACACAGITVLIDNDLDLCSVNKCVQLQSATAMAFLCWFTTLPSFFFNYWSLAS 178
           TLTFAAA A AGITVLI NDL  C+VN C + ++ATAMAF+ WF   PSF  N+WSLA+
Sbjct: 122 TLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLAT 179

[Close]

BLAST of Chy11G193910 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 121.3 bits (303), Expect = 7.8e-28
Identity = 74/151 (49.01%), Postives = 92/151 (60.93%), Query Frame = 0


Query: 28  MKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAASRDFSSVSAFSYLVAAASLQGVWSFAL 87
           M DI G PGT  GL LR  Q  FA  + S M  S  F S +AF YL+AA  LQ +WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 88  AIIDIYALLVKRTLQNRSIVSFFAVGDGITTTLTFAAACACAGITVLIDNDLDLCSVN-K 147
           AI+D +AL+ K+TL +  +VS F VGD +T+TL+ A A + AGITVL   DL  CS   +
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 148 CVQLQSATAMAFLCWFTTLPSFFFNYWSLAS 178
           C + Q + A+AFLCW T   S     W LAS
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of Chy11G193910 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 113.2 bits (282), Expect = 2.1e-25
Identity = 65/153 (42.48%), Postives = 93/153 (60.78%), Query Frame = 0


Query: 28  MKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAASRDFSSVSAFSYLVAAASLQGVWSFAL 87
           MK + G PGT  GL LR  Q   A A+  VM ++++FS  +AF YL+A+  LQ +WSF L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 88  AIIDIYALLVKRTLQNRSIVSFFAVGDGITTTLTFAAACACAGITVLIDNDLDLCSVNK- 147
           A +D+YAL  K+ LQN  +VS F VGD +T  L+ AAAC+ AG+ VL + D+  C+    
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 148 --CVQLQSATAMAFLCWFTTLPSFFFNYWSLAS 178
             C++ + A A++F+ W     S    +W LAS
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

[Close]

BLAST of Chy11G193910 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 105.1 bits (261), Expect = 5.8e-23
Identity = 62/151 (41.06%), Postives = 86/151 (56.95%), Query Frame = 0


Query: 28  MKDIEGMPGTRGGLALRCIQLGFAVAAFSVMAASRDFSSVSAFSYLVAAASLQGVWSFAL 87
           MK + G PGT  GL LR  Q   A A+  VM +S DFS+ +AF +LVA+  LQ +WSF L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 88  AIIDIYALLVKRTLQNRSIVSFFAVGDGITTTLTFAAACACAGITVLIDNDLDLCSVN-- 147
           A +D+YA+  K  L++  ++S F VGD +T  L  AAAC+ AG+TVL   D + C     
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 148 -KCVQLQSATAMAFLCWFTTLPSFFFNYWSL 176
             C + Q +  ++F  WF    S    +W L
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

The following BLAST results are available for this feature:

BLAST of Chy11G193910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SKN3	7.3e-55	63.33	CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1	[more]
Q10Q78	2.2e-51	61.02	CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 P...	[more]
P0DI70	7.1e-50	63.48	CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1	[more]
P0DI68	6.0e-49	57.87	CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1	[more]
P0DI69	1.4e-45	57.87	CASP-like protein 5A2 OS=Ginkgo biloba OX=3311 GN=gba_locus_19756 PE=2 SV=1	[more]

BLAST of Chy11G193910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAS5	8.0e-89	98.31	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G141370 PE=3 SV=1	[more]
A0A1S3CKE0	1.5e-87	97.19	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103501951 PE=3 SV=1	[more]
A0A5D3CR88	1.5e-87	97.19	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001...	[more]
A0A6J1FWR8	5.4e-77	84.83	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111448134 PE=3 SV=1	[more]
A0A6J1JE54	9.2e-77	84.27	CASP-like protein OS=Cucurbita maxima OX=3661 GN=LOC111483628 PE=3 SV=1	[more]

BLAST of Chy11G193910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145743.1	1.80e-116	98.31	CASP-like protein 5A2 [Cucumis sativus] >KGN46840.1 hypothetical protein Csa_020...	[more]
XP_008463948.1	8.57e-115	97.19	PREDICTED: CASP-like protein 5A2 [Cucumis melo] >XP_008463949.1 PREDICTED: CASP-...	[more]
XP_038900719.1	6.21e-108	91.01	CASP-like protein 5A2 [Benincasa hispida]	[more]
XP_023512454.1	3.16e-101	85.39	CASP-like protein 5A2 [Cucurbita pepo subsp. pepo] >KAG6570784.1 CASP-like prote...	[more]
XP_022943338.1	6.37e-101	84.83	CASP-like protein 5A2 [Cucurbita moschata]	[more]

BLAST of Chy11G193910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28370.1	5.2e-56	63.33	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	3.1e-45	54.75	Uncharacterised protein family (UPF0497)	[more]
AT3G23200.1	7.8e-28	49.01	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	2.1e-25	42.48	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	5.8e-23	41.06	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 35..162 e-value: 4.7E-24 score: 84.9
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 15..178
None	No IPR available	PANTHER	PTHR32021:SF16	CASP-LIKE PROTEIN 5A2	coord: 15..178

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G193910.1	Chy11G193910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane