Chy11G193870 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G193870
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	lysine-rich arabinogalactan protein 18-like
Location	chrH11: 11576329 .. 11577538 (-)
RNA-Seq Expression	Chy11G193870
Synteny	Chy11G193870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAAAACCATTCATCTCTGTTGTCTTCTTTTCATCTTCGTTTCTTTGTTCAACAATGTCTCTTTCTCTTTGGAACAACCACAGCAACTTCCTCCGTCTCCATCTCCTGTAAATTCTCCTCCACTACCTTCTCCTACCCCACTCCCTCACGCTCCAGCCAGTTCTCCGGTCGAATCTCCTCTGCATTCTCCTCCTGCGCCTCCTCCTTCAGATCTCCCTCCTACTCCATCCCCAGCGCCTTTTCTTCCTCCTGCATCCAGTCCTTCTATTTCACCTGCCGCTGATAGTGATTCCAGTAATATTACTTCCGGTGGCGGTGGAGAAGACTCCGAAGTCTCTAAAGGTGGGATGAATGGAGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCGGCACTGTGTTTCGTTGGAATAGGAGGATTTGTGTACAAGAAGCGTCAGGATAATATTCGTCGATCTCAGTACGGGAATGCTGCTAGGTCTTCGTTTTTGTAAGTTATTTGGAATGGAATCGTCATGGTACGGAAATTTCTGCTTAATTAGAAACGGATAGCAGTTCTATTGATTAGACAGCATTATCATTTTATTTTGACTGCGTAGTTTGGTAAACTCGTTTTATCAGAAACGGATGGCAGTCCTATTGTTTAGGAGGAGGTTGTTAGTAGCATTTCGATTTATTAGATGATTTTGAGTAGTAGTGTGATTACTTTTCCATACTATAGTTCTTAGCTTCTTGCTCAATCAGTTCGGCATTGCCGCTTTCTTTGTCATTCTGCTTTGTTTCCAAACATTTCTTTACTATATAGAATGTATCTTCTCCCTGCCTCATTTATCTCTTGTTTAATTGCTCAGACATTTGAGGAAGTATATGTTTATAGTTCTTACTTGAATTGTCTGTGTGGATTCGGATTTCTCAATTTTTAATTGCGTCTTTCATTTTTTAATTAAGAATCATTCAAGTGTCTTTTTCCATCTATATCAAGGGTTAATATTTTTCCTATTTCACATTGGAGAACCTGTGATTTAATAATGCAAACTGCAACTAACATAGCTTTTAGATTTCATTGTTTACATTATCTTAAGAAACATGGACTATGCTGAGGCTTTGCACATATTATCTCATTTTGCTTTGAATTGCCATTATTCGTTGTGTTGGACTGATAATTTTCCGGATTGGTTGGCCGGGTGTGTCAGGGCTGACCGTTGA

mRNA sequence

ATGGCGAAAACCATTCATCTCTGTTGTCTTCTTTTCATCTTCGTTTCTTTGTTCAACAATGTCTCTTTCTCTTTGGAACAACCACAGCAACTTCCTCCGTCTCCATCTCCTGTAAATTCTCCTCCACTACCTTCTCCTACCCCACTCCCTCACGCTCCAGCCAGTTCTCCGGTCGAATCTCCTCTGCATTCTCCTCCTGCGCCTCCTCCTTCAGATCTCCCTCCTACTCCATCCCCAGCGCCTTTTCTTCCTCCTGCATCCAGTCCTTCTATTTCACCTGCCGCTGATAGTGATTCCAGTAATATTACTTCCGGTGGCGGTGGAGAAGACTCCGAAGTCTCTAAAGGTGGGATGAATGGAGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCGGCACTGTGTTTCGTTGGAATAGGAGGATTTGTGTACAAGAAGCGTCAGGATAATATTCGTCGATCTCAGTACGGGAATGCTGCTAGGTCTTCGTTTTTAAACATGGACTATGCTGAGGCTTTGCACATATTATCTCATTTTGCTTTGAATTGCCATTATTCGTTGTGTTGGACTGATAATTTTCCGGATTGGTTGGCCGGGTGTGTCAGGGCTGACCGTTGA

Coding sequence (CDS)

ATGGCGAAAACCATTCATCTCTGTTGTCTTCTTTTCATCTTCGTTTCTTTGTTCAACAATGTCTCTTTCTCTTTGGAACAACCACAGCAACTTCCTCCGTCTCCATCTCCTGTAAATTCTCCTCCACTACCTTCTCCTACCCCACTCCCTCACGCTCCAGCCAGTTCTCCGGTCGAATCTCCTCTGCATTCTCCTCCTGCGCCTCCTCCTTCAGATCTCCCTCCTACTCCATCCCCAGCGCCTTTTCTTCCTCCTGCATCCAGTCCTTCTATTTCACCTGCCGCTGATAGTGATTCCAGTAATATTACTTCCGGTGGCGGTGGAGAAGACTCCGAAGTCTCTAAAGGTGGGATGAATGGAGGAAAGAAGGCTGGAATTGCAGTTGGAGTGATTGCGGCACTGTGTTTCGTTGGAATAGGAGGATTTGTGTACAAGAAGCGTCAGGATAATATTCGTCGATCTCAGTACGGGAATGCTGCTAGGTCTTCGTTTTTAAACATGGACTATGCTGAGGCTTTGCACATATTATCTCATTTTGCTTTGAATTGCCATTATTCGTTGTGTTGGACTGATAATTTTCCGGATTGGTTGGCCGGGTGTGTCAGGGCTGACCGTTGA

Protein sequence

MAKTIHLCCLLFIFVSLFNNVSFSLEQPQQLPPSPSPVNSPPLPSPTPLPHAPASSPVESPLHSPPAPPPSDLPPTPSPAPFLPPASSPSISPAADSDSSNITSGGGGEDSEVSKGGMNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFLNMDYAEALHILSHFALNCHYSLCWTDNFPDWLAGCVRADR*

Homology

[Close]

BLAST of Chy11G193870 vs. ExPASy TrEMBL
Match: A0A0A0KGE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G140840 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 4.9e-74
Identity = 160/165 (96.97%), Postives = 160/165 (96.97%), Query Frame = 0


Query: 1   MAKTIHLCCLLFIFVSLFNNVSFSLEQPQQLPPSPSPVNSPPLPSPTPLPHAPASSPVES 60
           M KTIHL CLLFIFVSLFNNVSFSLEQPQQLPPSPSPVNSPPLPSPTPLPHAPASSPVES
Sbjct: 1   MVKTIHLSCLLFIFVSLFNNVSFSLEQPQQLPPSPSPVNSPPLPSPTPLPHAPASSPVES 60

Query: 61  PLHSPPAPPPSDLPPTPSPAPFLPPASSPSISPAADSDSSNITSGGGGEDSEVSKGGMNG 120
           PLHSPPAPPPSDLP TPSPAP LPP SSPSISPAADSDSSNITSGGGGEDSEVSKGGMNG
Sbjct: 61  PLHSPPAPPPSDLPHTPSPAPLLPPVSSPSISPAADSDSSNITSGGGGEDSEVSKGGMNG 120

Query: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 166
           GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
Sbjct: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 165

[Close]

BLAST of Chy11G193870 vs. ExPASy TrEMBL
Match: A0A5D3CV84 (Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00190 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.5e-64
Identity = 146/165 (88.48%), Postives = 150/165 (90.91%), Query Frame = 0


Query: 1   MAKTIHLCCLLFIFVSLFNNVSFSLEQPQQLPPSPSPVNSPPLPSPTPLPHAPASSPVES 60
           MAKTIHL CLLFIF+SLF NVSFSLE   QLPPS SPVNSPPLPSPTP P+ PASSP ES
Sbjct: 1   MAKTIHLSCLLFIFLSLFINVSFSLELSHQLPPSTSPVNSPPLPSPTPFPNVPASSPAES 60

Query: 61  PLHSPPAPPPSDLPPTPSPAPFLPPASSPSISPAADSDSSNITSGGGGEDSEVSKGGMNG 120
           PLHSPPAPPPSDLPPTPSPAP L PA +PS S AADSDS NITSGGGGEDSEVSKGGMNG
Sbjct: 61  PLHSPPAPPPSDLPPTPSPAPVLSPAPTPSHSLAADSDSGNITSGGGGEDSEVSKGGMNG 120

Query: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 166
           GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYG+AARSSFL
Sbjct: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 165

[Close]

BLAST of Chy11G193870 vs. ExPASy TrEMBL
Match: A0A1S3CKF5 (pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103501947 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 3.5e-64
Identity = 146/165 (88.48%), Postives = 150/165 (90.91%), Query Frame = 0


Query: 1   MAKTIHLCCLLFIFVSLFNNVSFSLEQPQQLPPSPSPVNSPPLPSPTPLPHAPASSPVES 60
           MAKTIHL CLLFIF+SLF NVSFSLE   QLPPS SPVNSPPLPSPTP P+ PASSP ES
Sbjct: 1   MAKTIHLSCLLFIFLSLFINVSFSLELSHQLPPSTSPVNSPPLPSPTPFPNVPASSPAES 60

Query: 61  PLHSPPAPPPSDLPPTPSPAPFLPPASSPSISPAADSDSSNITSGGGGEDSEVSKGGMNG 120
           PLHSPPAPPPSDLPPTPSPAP L PA +PS S AADSDS NITSGGGGEDSEVSKGGMNG
Sbjct: 61  PLHSPPAPPPSDLPPTPSPAPVLSPAPTPSHSLAADSDSGNITSGGGGEDSEVSKGGMNG 120

Query: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 166
           GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYG+AARSSFL
Sbjct: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 165

[Close]

BLAST of Chy11G193870 vs. ExPASy TrEMBL
Match: A0A6J1K7T9 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC111490958 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 1.6e-48
Identity = 118/168 (70.24%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 1   MAKTIHLCCLLFIFVSLFNNVSFSLEQPQQLPPSPSP---VNSPPLPSPTPLPHAPASSP 60
           MAK++  CCLL +FV++F + +FSLEQP ++PPSPSP    +SPP+PSPTP PHAPASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLPPTPSPAPFLPPASSPSISPAADSDSSNITSGGGGEDSEVSKGG 120
            ESPL SPPAPPPSDL P+PSPA    P+ +P+ S  ADSD  N  + GGG ++E SKGG
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETEASKGG 120

Query: 121 MNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 166
           MNGGKKAGIAVGVIAA CFVGIGG VYKKRQDNIRRSQ+GNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Chy11G193870 vs. ExPASy TrEMBL
Match: A0A6J1H149 (lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC111459430 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 3.9e-47
Identity = 116/168 (69.05%), Postives = 135/168 (80.36%), Query Frame = 0


Query: 1   MAKTIHLCCLLFIFVSLFNNVSFSLEQPQQLPPSPSP---VNSPPLPSPTPLPHAPASSP 60
           MAK++  CCLL +FV++F + +FSLEQP ++PPSPSP    +SPP+PSPTP PHAPASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLPPTPSPAPFLPPASSPSISPAADSDSSNITSGGGGEDSEVSKGG 120
            ESPL SPPAPP SDL P PSPA    P+ +P+ S  ADSD  N  + GGG ++E SKGG
Sbjct: 61  AESPLKSPPAPPRSDLTPCPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120

Query: 121 MNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 166
           MNGGKKAGIAVGVIAA CFVG+GG VYKKRQDNIRRSQ+GNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Chy11G193870 vs. NCBI nr
Match: XP_011656995.1 (proline-rich receptor-like protein kinase PERK9 [Cucumis sativus] >KGN46836.1 hypothetical protein Csa_020743 [Cucumis sativus])

HSP 1 Score: 286 bits (731), Expect = 8.91e-96
Identity = 160/165 (96.97%), Postives = 160/165 (96.97%), Query Frame = 0


Query: 1   MAKTIHLCCLLFIFVSLFNNVSFSLEQPQQLPPSPSPVNSPPLPSPTPLPHAPASSPVES 60
           M KTIHL CLLFIFVSLFNNVSFSLEQPQQLPPSPSPVNSPPLPSPTPLPHAPASSPVES
Sbjct: 1   MVKTIHLSCLLFIFVSLFNNVSFSLEQPQQLPPSPSPVNSPPLPSPTPLPHAPASSPVES 60

Query: 61  PLHSPPAPPPSDLPPTPSPAPFLPPASSPSISPAADSDSSNITSGGGGEDSEVSKGGMNG 120
           PLHSPPAPPPSDLP TPSPAP LPP SSPSISPAADSDSSNITSGGGGEDSEVSKGGMNG
Sbjct: 61  PLHSPPAPPPSDLPHTPSPAPLLPPVSSPSISPAADSDSSNITSGGGGEDSEVSKGGMNG 120

Query: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 165
           GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL
Sbjct: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 165

[Close]

BLAST of Chy11G193870 vs. NCBI nr
Match: XP_008463942.2 (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo] >KAA0035341.1 pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo var. makuwa] >TYK14296.1 pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 253 bits (646), Expect = 7.79e-83
Identity = 146/165 (88.48%), Postives = 150/165 (90.91%), Query Frame = 0


Query: 1   MAKTIHLCCLLFIFVSLFNNVSFSLEQPQQLPPSPSPVNSPPLPSPTPLPHAPASSPVES 60
           MAKTIHL CLLFIF+SLF NVSFSLE   QLPPS SPVNSPPLPSPTP P+ PASSP ES
Sbjct: 1   MAKTIHLSCLLFIFLSLFINVSFSLELSHQLPPSTSPVNSPPLPSPTPFPNVPASSPAES 60

Query: 61  PLHSPPAPPPSDLPPTPSPAPFLPPASSPSISPAADSDSSNITSGGGGEDSEVSKGGMNG 120
           PLHSPPAPPPSDLPPTPSPAP L PA +PS S AADSDS NITSGGGGEDSEVSKGGMNG
Sbjct: 61  PLHSPPAPPPSDLPPTPSPAPVLSPAPTPSHSLAADSDSGNITSGGGGEDSEVSKGGMNG 120

Query: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 165
           GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYG+AARSSFL
Sbjct: 121 GKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGSAARSSFL 165

[Close]

BLAST of Chy11G193870 vs. NCBI nr
Match: XP_038901486.1 (early nodulin-20-like isoform X1 [Benincasa hispida])

HSP 1 Score: 224 bits (572), Expect = 1.45e-71
Identity = 138/168 (82.14%), Postives = 142/168 (84.52%), Query Frame = 0


Query: 1   MAKTIHLCCLLFIFVSLFNNVSFSLEQPQQLPPSPSPV---NSPPLPSPTPLPHAPASSP 60
           MAK+I  C LLFIFVSLF NVSFSLE  QQLPPSPSP    NSPPLPSPTP PHAPASSP
Sbjct: 1   MAKSIPFCSLLFIFVSLFINVSFSLELSQQLPPSPSPESPENSPPLPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLPPTPSPAPFLPPASSPSISPAADSDSSNITSGGGGEDSEVSKGG 120
           VESPLHSPPAPPPSDL  +PSP+P   P+ SPS SP ADSD SN TS GGGEDSE SKGG
Sbjct: 61  VESPLHSPPAPPPSDLTHSPSPSPS--PSPSPSPSPTADSDFSNSTSSGGGEDSEASKGG 120

Query: 121 MNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 165
           M GGKKAGIAVGVIAA  FVGIGGFVYKKRQDNIRRSQYGNAARSSFL
Sbjct: 121 MTGGKKAGIAVGVIAAASFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 166

[Close]

BLAST of Chy11G193870 vs. NCBI nr
Match: XP_022995398.1 (lysine-rich arabinogalactan protein 18-like [Cucurbita maxima])

HSP 1 Score: 201 bits (511), Expect = 2.87e-62
Identity = 118/168 (70.24%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 1   MAKTIHLCCLLFIFVSLFNNVSFSLEQPQQLPPSPSP---VNSPPLPSPTPLPHAPASSP 60
           MAK++  CCLL +FV++F + +FSLEQP ++PPSPSP    +SPP+PSPTP PHAPASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLPPTPSPAPFLPPASSPSISPAADSDSSNITSGGGGEDSEVSKGG 120
            ESPL SPPAPPPSDL P+PSPA    P+ +P+ S  ADSD  N  + GGG ++E SKGG
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETEASKGG 120

Query: 121 MNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 165
           MNGGKKAGIAVGVIAA CFVGIGG VYKKRQDNIRRSQ+GNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGIGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Chy11G193870 vs. NCBI nr
Match: KAG6605547.1 (hypothetical protein SDJN03_02864, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013894.1 hypothetical protein SDJN02_24063, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 201 bits (510), Expect = 4.08e-62
Identity = 117/168 (69.64%), Postives = 137/168 (81.55%), Query Frame = 0


Query: 1   MAKTIHLCCLLFIFVSLFNNVSFSLEQPQQLPPSPSP---VNSPPLPSPTPLPHAPASSP 60
           MAK++  CCLL +FV++F + +FSLEQP ++PPSPSP    +SPP+PSPTP PHAPASSP
Sbjct: 1   MAKSVAFCCLLLMFVAVFMDAAFSLEQPVEVPPSPSPESAADSPPVPSPTPFPHAPASSP 60

Query: 61  VESPLHSPPAPPPSDLPPTPSPAPFLPPASSPSISPAADSDSSNITSGGGGEDSEVSKGG 120
            ESPL SPPAPPPSDL P+PSPA    P+ +P+ S  ADSD  N  + GGG ++E SKGG
Sbjct: 61  AESPLKSPPAPPPSDLTPSPSPARVPSPSPAPAPSLTADSDFRNSIANGGGGETETSKGG 120

Query: 121 MNGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 165
           MNGGKKAGIAVGVIAA CFVG+GG VYKKRQDNIRRSQ+GNAARSSFL
Sbjct: 121 MNGGKKAGIAVGVIAAACFVGVGGIVYKKRQDNIRRSQFGNAARSSFL 168

[Close]

BLAST of Chy11G193870 vs. TAIR 10
Match: AT3G45230.1 (hydroxyproline-rich glycoprotein family protein )

HSP 1 Score: 75.1 bits (183), Expect = 7.4e-14
Identity = 69/144 (47.92%), Postives = 89/144 (61.81%), Query Frame = 0


Query: 33  PSPSPVNSPPLPSPTPLPHAPASSPVESPL-HSPPAPPPSDLPPTPSPA------PFLP- 92
           PSP   +SP + +  P      +SP ESP+ +S P  P ++  P+PSPA      P LP 
Sbjct: 29  PSPDLADSPLIHASPPSKLGSHNSPAESPIEYSSPPEPETEHSPSPSPANSPSVSPPLPN 88

Query: 93  ----PASSPSISP---AADSDSSNITSGGGGEDSEVSKGGMNGGKKAGIAVGVIAALCFV 152
               P+SS S SP   A+D + S+IT   G +    S GGM+GGKK G+A G IAA+C V
Sbjct: 89  DSQSPSSSASPSPSPEASDVNHSDITGIEGEKLPSGSGGGMSGGKKVGVAFGAIAAVCVV 148

Query: 153 GIGGFVYKKRQDNIRRSQYGNAAR 162
           G+ GFVYKKRQ+NIRRS+YG AAR
Sbjct: 149 GVAGFVYKKRQENIRRSRYGYAAR 172

[Close]

BLAST of Chy11G193870 vs. TAIR 10
Match: AT2G28440.1 (proline-rich family protein )

HSP 1 Score: 49.3 bits (116), Expect = 4.3e-06
Identity = 62/167 (37.13%), Postives = 79/167 (47.31%), Query Frame = 0


Query: 22  SFSLEQPQQLPPSPSP-VNSPPLPSPTPLPHAPASSPVESPLHSPPAPPPSDLPPTPSPA 81
           S S E    LPPS SP  NSP  P+ +P P + A SP  SP   PP P     P  P PA
Sbjct: 108 SSSPEADSPLPPSSSPEANSPQSPASSPKPESLADSP--SPPPPPPQPESPSSPSYPEPA 167

Query: 82  P-------------------FLPPASSPSISPAADSDSSNITSGGGGEDSEVSKG---GM 141
           P                   F  PA SP +  A D  +S+      GE+    +G   GM
Sbjct: 168 PVPAPSDDDSDDDPEPETEYFPSPAPSPELGMAQDIKASD----AAGEELNDERGEDYGM 227

Query: 142 NGGKKAGIAVGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSFL 166
           +G +KAGIA+G I  +  + IG  VYKKR+DN+ R++Y       FL
Sbjct: 228 SGLEKAGIAIGTILGVGAIVIGALVYKKRRDNMTRARYTYFTEGEFL 268

[Close]

BLAST of Chy11G193870 vs. TAIR 10
Match: AT5G60630.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 6 growth stages; BEST Arabidopsis thaliana protein match is: hydroxyproline-rich glycoprotein family protein (TAIR:AT3G45230.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 45.8 bits (107), Expect = 4.8e-05
Identity = 43/104 (41.35%), Postives = 61/104 (58.65%), Query Frame = 0


Query: 63  HSPPAP-PPSDLPPTPSPAPFLPPASSPSISPAADSDSSNITSGGGGEDSEVSKGGMNGG 122
           HS   P   +++ P+P+ +      SS  ++ + D + ++ T  GG E S   + G  GG
Sbjct: 36  HSSSLPQSETEMSPSPTMSNDYDYPSSSQLTESNDLNYTDSTRPGGEEASVGGENGGGGG 95

Query: 123 KKAGIA-VGVIAALCFVGIGGFVYKKRQDNIRRSQYGNAARSSF 165
           KK GIA VG IAA   VG GG+V KKR++NIRRS+YG A+   F
Sbjct: 96  KKTGIAVVGSIAAASMVGFGGYVLKKRRENIRRSRYGYASTEFF 139

The following BLAST results are available for this feature:

BLAST of Chy11G193870 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G193870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KGE9	4.9e-74	96.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G140840 PE=4 SV=1	[more]
A0A5D3CV84	3.5e-64	88.48	Pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo var....	[more]
A0A1S3CKF5	3.5e-64	88.48	pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucumis melo OX=3...	[more]
A0A6J1K7T9	1.6e-48	70.24	lysine-rich arabinogalactan protein 18-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A6J1H149	3.9e-47	69.05	lysine-rich arabinogalactan protein 18-like OS=Cucurbita moschata OX=3662 GN=LOC...	[more]

BLAST of Chy11G193870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656995.1	8.91e-96	96.97	proline-rich receptor-like protein kinase PERK9 [Cucumis sativus] >KGN46836.1 hy...	[more]
XP_008463942.2	7.79e-83	88.48	PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Cucumis ...	[more]
XP_038901486.1	1.45e-71	82.14	early nodulin-20-like isoform X1 [Benincasa hispida]	[more]
XP_022995398.1	2.87e-62	70.24	lysine-rich arabinogalactan protein 18-like [Cucurbita maxima]	[more]
KAG6605547.1	4.08e-62	69.64	hypothetical protein SDJN03_02864, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Chy11G193870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G45230.1	7.4e-14	47.92	hydroxyproline-rich glycoprotein family protein	[more]
AT2G28440.1	4.3e-06	37.13	proline-rich family protein	[more]
AT5G60630.1	4.8e-05	41.35	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 27..39 score: 38.46 coord: 77..98 score: 26.36 coord: 63..75 score: 46.15 coord: 41..57 score: 48.24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 26..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 90..108
None	No IPR available	PANTHER	PTHR36721:SF5	PROTEIN, PUTATIVE-RELATED	coord: 3..165
None	No IPR available	PANTHER	PTHR36721	PROLINE-RICH FAMILY PROTEIN	coord: 3..165

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G193870.1	Chy11G193870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane