Chy11G193270 (gene) Cucumber (hystrix) v1

Overview
NameChy11G193270
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH11: 10279377 .. 10281492 (+)
RNA-Seq ExpressionChy11G193270
SyntenyChy11G193270
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTGCAGCTGATTATTGGAAAGACATTTACACAGAAAAGAATGGAGATTGAAGAACTACAAATTTCCAAATCAAAAAAAAAAAAAAAATGTACAGATGATGATCATCAAATCACTGCAGGAAGTAATAGAGAGAGGAGGGATTGTCAGGGACGAGGAAGCTCCACTTGGTGTCCAACTTGTGGTTGTCTTCGAAGAAGAAGAAGCATCTACAGAGGGGACAAGTGAAGCGATTCCTGTCAATCCATTCCCGGATGCAATTGAAATGAAATAAATGCTCACAATTCGGTAACTTACACACCGAATCTCCTGATCTACCAAACTCTGTCAAACAGATGGAGCAAATCTCCTCTGAGGATCCTCCATCCTCATCGTATGACCTCACCACCAGAACGTCGGTTCCATGTTCTGGGGAGGAGGAGGGCAGGCCAAAAACAGTAGCCACCACGCCCAGAATGGCTTGATTGATACGAAAAAGCGGAATCCACAGGAAAGTGTTGAAGAAAAGGATGGGGAATCGCATAGGGGAAACGAGCCAAAACAAACCCAACATATTGGCGATTGGATTGAAGTTTTAAGCACACACACGGAGAGAGAGAGAGAGAGTTTAGGTGGGAGGTGGTTGATATGAAAAGGGAATTGGATTTGGATCGCCATTATATATAGATATAATAATTGGGATCAGTATAGATTGATATGAAGGAGTCTTGAGTTTTTTGGGCCAAATTAAAGTCGTTGTCTTCACATTCATATACTGATACCCAACTTTTATTGACACAGTTATAAAAGAAATCACTCATATTATTTAACAACCAAAATAAAAGACCTTCATCCATCGTCTTATCCTTTCTAGTTTCTACCCCTTTCCCTTCCATGTGGGTGGGAATTCTTTTGCATTTACCTGTTTGCTTCCTCCCCTCCACTATCTTTGATCCGGACGTTGGTATATATTGTGAACTCAACTCTTGTTTATTTTGGTTTTATTATTATTACTGCATCTCCCTTTCAAAAAAATAATTTAAAGTTGAACAAAAGCACCCAGTGTACAATTAAAATGACACTTTAAGATCATTTCTCTTTTTGTTAAATTTCACAAAGTGTCTCATCTTTTTTCTATTTGTCCTTTAAACAAACACACCTTTATTCTAGAGCCGATCCCACCTCATTTTCTAAATTATAAAAATAGCAAATTTAGATTAATGTAATTTTAATTTATATTCCATATCTGCATTTATTATTGTTTAATTGAATATTTTTGTATTCCTCATTGTTGAATAGGAAATTTTGATGAAATTTAGGGTTGCCTTTAATGCAATCACAAATTGCTACATCCTTTACTAAATTAACGATGAAAAATATAAATAATTAAATTTTGGACTAATTAAAAAAAATTGATATGTGTCTAAAATTAAAAGTGAAAACATAAATTGACTAATTCTAATGATGCCACATGTTTTCATTATGACTATTGGATCAAGTTAATTATTAAATATTATTTACTTAGGCTAAGTTCAATTGAGCCAGAAAGTAAGCTTAATTTAGTCCAAAATGCTAAATATGACTCAAAGCCCATAAAGTCCAACAGACAATTCTATAAATAGAGGAGTTCTCATTTGTAAGGGGTTAGGAATTTTTTATTCCAGAAGGTCTAAGAGAGAATTCTCTTAAGAGCTAAAAGACTCCAATTTCAAGAACATCACATGCTCCACTTCCTCATATCAAGCATAAACATCAAATCTACGCATCCAATCAAGAGAGAATCAGAGTATCAAATTCTAGAGATCGAACCACATCACATCAAATTAATATAAATACAACATCAACTCAAGTTCACCTTCATGAATCAAATTTCTCTGAAAATCTCGTGCGAACAAATTGACACGTCCGGTGGGATCTCTACCTCTCATCTCTATCTCGAAACTCAAATCAACAAACCAACTAATGACACTAAGGAAGGCTGCATCCAAATCTTCTGTTGCAAGCGACGCCTACACAGAACATGTCACCCGCAATCGTTCTAAAGGGATCATCCAACAGCAAGATCAAAGTTCTGTCATCGCACAGAGCATCCTTAAGCAACTGATGGAATCTCCTAAAGGCGAGATCATCATCAGAGAA

mRNA sequence

TTTGCAGCTGATTATTGGAAAGACATTTACACAGAAAAGAATGGAGATTGAAGAACTACAAATTTCCAAATCAAAAAAAAAAAAAAAATGTACAGATGATGATCATCAAATCACTGCAGGAAGTAATAGAGAGAGGAGGGATTGTCAGGGACGAGGAAGCTCCACTTGGTGTCCAACTTGTGGTTGTCTTCGAAGAAGAAGAAGCATCTACAGAGGGGACAAGTGAAGCGATTCCTGTCAATCCATTCCCGGATGCAATTGAAATGAAATAAATGCTCACAATTCGGTAACTTACACACCGAATCTCCTGATCTACCAAACTCTGTCAAACAGATGGAGCAAATCTCCTCTGAGGATCCTCCATCCTCATCGTATGACCTCACCACCAGAACGTCGGTTCCATGTTCTGGGGAGGAGGAGGGCAGGCCAAAAACAGTAGCCACCACGCCCAGAATGGCTTGATTGATACGAAAAAGCGGAATCCACAGGAAAGTGTTGAAGAAAAGGATGGGGAATCGCATAGGGGAAACGAGCCAAAACAAACCCAACATATTGGCGATTGGATTGAAGTTTTAAGCACACACACGGAGAGAGAGAGAGAGAGTTTAGAA

Coding sequence (CDS)

TTTGCAGCTGATTATTGGAAAGACATTTACACAGAAAAGAATGGAGATTGAAGAACTACAAATTTCCAAATCAAAAAAAAAAAAAAAATGTACAGATGATGATCATCAAATCACTGCAGGAAGTAATAGAGAGAGGAGGGATTGTCAGGGACGAGGAAGCTCCACTTGGTGTCCAACTTGTGGTTGTCTTCGAAGAAGAAGAAGCATCTACAGAGGGGACAAGTGAAGCGATTCCTGTCAATCCATTCCCGGATGCAATTGAAATGAAATAAATGCTCACAATTCGGTAACTTACACACCGAATCTCCTGATCTACCAAACTCTGTCAAACAGATGGAGCAAATCTCCTCTGAGGATCCTCCATCCTCATCGTATGACCTCACCACCAGAACGTCGGTTCCATGTTCTGGGGAGGAGGAGGGCAGGCCAAAAACAGTAGCCACCACGCCCAGAATGGCTTGATTGATACGAAAAAGCGGAATCCACAGGAAAGTGTTGAAGAAAAGGATGGGGAATCGCATAGGGGAAACGAGCCAAAACAAACCCAACATATTGGCGATTGGATTGAAGTTTTAAGCACACACACGGAGAGAGAGAGAGAGAGTTTAGAA

Protein sequence

FAADYWKDIYTEKNGD*RTTNFQIKKKKKMYR**SSNHCRK**REEGLSGTRKLHLVSNLWLSSKKKKHLQRGQVKRFLSIHSRMQLK*NKCSQFGNLHTESPDLPNSVKQMEQISSEDPPSSSYDLTTRTSVPCSGEEEGRPKTVATTPRMA*LIRKSGIHRKVLKKRMGNRIGETSQNKPNILAIGLKF*AHTRRERERV*X
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..129

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy11G193270.1Chy11G193270.1mRNA