Chy11G193000 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G193000
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH11: 9379479 .. 9380065 (+)
RNA-Seq Expression	Chy11G193000
Synteny	Chy11G193000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGCCAAATTCCCTCTTTCTTCTTCCCTTACCATCAAATTTTCTCTCCAACAAAATCCTTCTTCTTCCTTCTTCCCTCCTCTTCCTTCACCCTTCTCGTCGCCAAAGCTTAGGCCAACGCCTTCTTCTCGCTTCAAGCTTCTAGCAAATTTAGGTAAAAAAAGAGCTTTCACTTTTGCTTGGATCTGCAACTCATTCTTGCTGTGTTTTTATATATATATATTGATGCCTTTTTATTACAGGTGGTGGAGATGCAGAAATCAAGAAGGGAGGGAAGAAAAAGTTTATAACTAAAGAAGAAGAACCAGAGCAGTAAACATTTTTTTCCCTTTTCTGTTTTCCTTTTTCTGGTATCAGAATGTTCAACAATTTGAGTGGAAATACAAGAAGATAATTATAAAATACCAAGCTGAAAATCTGATTGGATTTGATGGTGTAGGTATTGGCAGACAGCAGGGGAAAGAGAAGGGGAGAATCCTATGAAGACTCCTCTTCCTTATATCATCATCTTCGGTATGTCAACTCCGTTCGTGATCTTAGCCATAGCTTTTGCCAATGGCTGGGTTAAGGTTCCTGTGAGATGA

mRNA sequence

ATGGCCGCCAAATTCCCTCTTTCTTCTTCCCTTACCATCAAATTTTCTCTCCAACAAAATCCTTCTTCTTCCTTCTTCCCTCCTCTTCCTTCACCCTTCTCGTCGCCAAAGCTTAGGCCAACGCCTTCTTCTCGCTTCAAGCTTCTAGCAAATTTAGGTGGTGGAGATGCAGAAATCAAGAAGGGAGGGAAGAAAAAGTTTATAACTAAAGAAGAAGAACCAGAGCAGTATTGGCAGACAGCAGGGGAAAGAGAAGGGGAGAATCCTATGAAGACTCCTCTTCCTTATATCATCATCTTCGGTATGTCAACTCCGTTCGTGATCTTAGCCATAGCTTTTGCCAATGGCTGGGTTAAGGTTCCTGTGAGATGA

Coding sequence (CDS)

ATGGCCGCCAAATTCCCTCTTTCTTCTTCCCTTACCATCAAATTTTCTCTCCAACAAAATCCTTCTTCTTCCTTCTTCCCTCCTCTTCCTTCACCCTTCTCGTCGCCAAAGCTTAGGCCAACGCCTTCTTCTCGCTTCAAGCTTCTAGCAAATTTAGGTGGTGGAGATGCAGAAATCAAGAAGGGAGGGAAGAAAAAGTTTATAACTAAAGAAGAAGAACCAGAGCAGTATTGGCAGACAGCAGGGGAAAGAGAAGGGGAGAATCCTATGAAGACTCCTCTTCCTTATATCATCATCTTCGGTATGTCAACTCCGTTCGTGATCTTAGCCATAGCTTTTGCCAATGGCTGGGTTAAGGTTCCTGTGAGATGA

Protein sequence

MAAKFPLSSSLTIKFSLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKVPVR*

Homology

[Close]

BLAST of Chy11G193000 vs. ExPASy TrEMBL
Match: A0A0A0KA68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112440 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.9e-61
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MAAKFPLSSSLTIKFSLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 60
           MAAKFPLSSSLTIKF LQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK
Sbjct: 1   MAAKFPLSSSLTIKFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 60

Query: 61  KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV 120
           KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV
Sbjct: 61  KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV 120

Query: 121 PVR 124
           PVR
Sbjct: 121 PVR 123

[Close]

BLAST of Chy11G193000 vs. ExPASy TrEMBL
Match: A0A5D3CJG8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001450 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.7e-61
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MAAKFPLSSSLTIKFSLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 60
           MAAKFPLSSSLT+KF LQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK
Sbjct: 45  MAAKFPLSSSLTVKFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 104

Query: 61  KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV 120
           KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV
Sbjct: 105 KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV 164

Query: 121 PVR 124
           PVR
Sbjct: 165 PVR 167

[Close]

BLAST of Chy11G193000 vs. ExPASy TrEMBL
Match: A0A1S3CKW7 (uncharacterized protein LOC103502113 OS=Cucumis melo OX=3656 GN=LOC103502113 PE=4 SV=1)

HSP 1 Score: 243.8 bits (621), Expect = 3.7e-61
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MAAKFPLSSSLTIKFSLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 60
           MAAKFPLSSSLT+KF LQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK
Sbjct: 45  MAAKFPLSSSLTVKFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 104

Query: 61  KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV 120
           KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV
Sbjct: 105 KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV 164

Query: 121 PVR 124
           PVR
Sbjct: 165 PVR 167

[Close]

BLAST of Chy11G193000 vs. ExPASy TrEMBL
Match: A0A6J1G6R0 (uncharacterized protein LOC111451373 OS=Cucurbita moschata OX=3662 GN=LOC111451373 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 3.3e-49
Identity = 110/126 (87.30%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MAAKFPLSSSL-TIKFSLQQNPSSSFFPPLP-SPFSSPKLRPTP-SSRFKLLANLGGGDA 60
           MAAKFPLSSSL TIKFSLQQNP S FF PLP + FS P+ RPTP +S+FKLLAN GGGDA
Sbjct: 1   MAAKFPLSSSLTTIKFSLQQNP-SPFFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDA 60

Query: 61  EIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW 120
           E+KKGGKKKFITKE+EPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW
Sbjct: 61  EVKKGGKKKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW 120

Query: 121 VKVPVR 124
           VKVPVR
Sbjct: 121 VKVPVR 125

[Close]

BLAST of Chy11G193000 vs. ExPASy TrEMBL
Match: A0A6J1I5Y3 (uncharacterized protein LOC111469898 OS=Cucurbita maxima OX=3661 GN=LOC111469898 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 1.3e-48
Identity = 109/125 (87.20%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 1   MAAKFPLSSSL-TIKFSLQQNPSSSFFPPLP-SPFSSPKLRPTPSSRFKLLANLGGGDAE 60
           MAAKFPLSSSL TIKF LQQNP S FFPPLP + FS PK +P  +S+FKLLAN GGGDAE
Sbjct: 1   MAAKFPLSSSLTTIKFPLQQNP-SPFFPPLPCTTFSPPKPKPR-ASQFKLLANSGGGDAE 60

Query: 61  IKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV 120
           +KKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV
Sbjct: 61  VKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV 120

Query: 121 KVPVR 124
           KVPVR
Sbjct: 121 KVPVR 123

[Close]

BLAST of Chy11G193000 vs. NCBI nr
Match: XP_004140001.1 (uncharacterized protein LOC101219556 [Cucumis sativus] >KGN46605.1 hypothetical protein Csa_005653 [Cucumis sativus])

HSP 1 Score: 243 bits (620), Expect = 6.69e-81
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MAAKFPLSSSLTIKFSLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 60
           MAAKFPLSSSLTIKF LQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK
Sbjct: 1   MAAKFPLSSSLTIKFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 60

Query: 61  KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV 120
           KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV
Sbjct: 61  KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV 120

Query: 121 PVR 123
           PVR
Sbjct: 121 PVR 123

[Close]

BLAST of Chy11G193000 vs. NCBI nr
Match: XP_008464165.1 (PREDICTED: uncharacterized protein LOC103502113 [Cucumis melo] >KAA0060798.1 uncharacterized protein E6C27_scaffold137G00170 [Cucumis melo var. makuwa] >TYK11961.1 uncharacterized protein E5676_scaffold177G001450 [Cucumis melo var. makuwa])

HSP 1 Score: 243 bits (619), Expect = 4.14e-80
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   MAAKFPLSSSLTIKFSLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 60
           MAAKFPLSSSLT+KF LQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK
Sbjct: 45  MAAKFPLSSSLTVKFPLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 104

Query: 61  KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV 120
           KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV
Sbjct: 105 KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV 164

Query: 121 PVR 123
           PVR
Sbjct: 165 PVR 167

[Close]

BLAST of Chy11G193000 vs. NCBI nr
Match: XP_038902667.1 (uncharacterized protein LOC120089303 [Benincasa hispida])

HSP 1 Score: 210 bits (535), Expect = 5.76e-68
Identity = 111/123 (90.24%), Postives = 112/123 (91.06%), Query Frame = 0


Query: 1   MAAKFPLSSSLTIKFSLQQNPSSSFFPPLPSPFSSPKLRPTPSSRFKLLANLGGGDAEIK 60
           MA K PLSSSLTIKF LQQ+PSS FF PLP PFS PK RP PS RFKLLANLGGGDAEIK
Sbjct: 1   MAVKVPLSSSLTIKFPLQQSPSS-FFSPLPCPFSLPKPRPMPS-RFKLLANLGGGDAEIK 60

Query: 61  KGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV 120
           KG KKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV
Sbjct: 61  KGAKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWVKV 120

Query: 121 PVR 123
           PVR
Sbjct: 121 PVR 121

[Close]

BLAST of Chy11G193000 vs. NCBI nr
Match: XP_022947537.1 (uncharacterized protein LOC111451373 [Cucurbita moschata] >KAG6604915.1 hypothetical protein SDJN03_02232, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 203 bits (517), Expect = 3.64e-65
Identity = 110/126 (87.30%), Postives = 116/126 (92.06%), Query Frame = 0


Query: 1   MAAKFPLSSSLT-IKFSLQQNPSSSFFPPLP-SPFSSPKLRPTP-SSRFKLLANLGGGDA 60
           MAAKFPLSSSLT IKFSLQQNPS  FF PLP + FS P+ RPTP +S+FKLLAN GGGDA
Sbjct: 1   MAAKFPLSSSLTTIKFSLQQNPSP-FFAPLPCTTFSPPQPRPTPRASQFKLLANSGGGDA 60

Query: 61  EIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW 120
           E+KKGGKKKFITKE+EPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW
Sbjct: 61  EVKKGGKKKFITKEQEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGW 120

Query: 121 VKVPVR 123
           VKVPVR
Sbjct: 121 VKVPVR 125

[Close]

BLAST of Chy11G193000 vs. NCBI nr
Match: XP_022971133.1 (uncharacterized protein LOC111469898 [Cucurbita maxima])

HSP 1 Score: 201 bits (512), Expect = 1.97e-64
Identity = 109/125 (87.20%), Postives = 114/125 (91.20%), Query Frame = 0


Query: 1   MAAKFPLSSSLT-IKFSLQQNPSSSFFPPLP-SPFSSPKLRPTPSSRFKLLANLGGGDAE 60
           MAAKFPLSSSLT IKF LQQNPS  FFPPLP + FS PK +P  +S+FKLLAN GGGDAE
Sbjct: 1   MAAKFPLSSSLTTIKFPLQQNPSP-FFPPLPCTTFSPPKPKPR-ASQFKLLANSGGGDAE 60

Query: 61  IKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV 120
           +KKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV
Sbjct: 61  VKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANGWV 120

Query: 121 KVPVR 123
           KVPVR
Sbjct: 121 KVPVR 123

[Close]

BLAST of Chy11G193000 vs. TAIR 10
Match: AT4G13500.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G05310.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 147.9 bits (372), Expect = 5.4e-36
Identity = 84/127 (66.14%), Postives = 92/127 (72.44%), Query Frame = 0


Query: 1   MAAKFPL-SSSLTIKFSLQQNPSSSFFP---PLPSPFSSPKLRPTPSSRFKLLANLGGGD 60
           MAAKF + SSS + + S     SSS +     LP  F  P   P     FKL A LGGGD
Sbjct: 1   MAAKFRISSSSFSHRASDSSTSSSSSYSSLLALPQFFCPPS--PLGFPEFKLHAKLGGGD 60

Query: 61  AEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANG 120
            E+K   KKKFITKEEEPEQYWQ+ GEREGENPMKTPLPYIIIFGMSTPFVILAIAFANG
Sbjct: 61  GEVKPKDKKKFITKEEEPEQYWQSVGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANG 120

Query: 121 WVKVPVR 124
           W+KVP+R
Sbjct: 121 WIKVPIR 125

[Close]

BLAST of Chy11G193000 vs. TAIR 10
Match: AT2G05310.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13500.1); Has 50 Blast hits to 50 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 142.1 bits (357), Expect = 3.0e-34
Identity = 81/127 (63.78%), Postives = 92/127 (72.44%), Query Frame = 0


Query: 1   MAAKFPL-SSSLTIKFSLQQNPSSSFFP---PLPSPFSSPKLRPTPSSRFKLLANLGGGD 60
           MAAK  + SSS + + +     SSS +     LP  F  P   P    +FKL A LGGGD
Sbjct: 1   MAAKLCIPSSSFSHRTNDSITSSSSSYSSLLALPQFFCPPS--PLGFPQFKLHAKLGGGD 60

Query: 61  AEIKKGGKKKFITKEEEPEQYWQTAGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANG 120
            E+K   KKKFITK+EEPEQYWQ+ GEREGENPMKTPLPYIIIFGMSTPFVILAIAFANG
Sbjct: 61  GEVKPKDKKKFITKDEEPEQYWQSVGEREGENPMKTPLPYIIIFGMSTPFVILAIAFANG 120

Query: 121 WVKVPVR 124
           W+KVP+R
Sbjct: 121 WIKVPIR 125

The following BLAST results are available for this feature:

BLAST of Chy11G193000 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G193000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KA68	2.9e-61	99.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G112440 PE=4 SV=1	[more]
A0A5D3CJG8	3.7e-61	98.37	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3CKW7	3.7e-61	98.37	uncharacterized protein LOC103502113 OS=Cucumis melo OX=3656 GN=LOC103502113 PE=...	[more]
A0A6J1G6R0	3.3e-49	87.30	uncharacterized protein LOC111451373 OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A6J1I5Y3	1.3e-48	87.20	uncharacterized protein LOC111469898 OS=Cucurbita maxima OX=3661 GN=LOC111469898...	[more]

BLAST of Chy11G193000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140001.1	6.69e-81	99.19	uncharacterized protein LOC101219556 [Cucumis sativus] >KGN46605.1 hypothetical ...	[more]
XP_008464165.1	4.14e-80	98.37	PREDICTED: uncharacterized protein LOC103502113 [Cucumis melo] >KAA0060798.1 unc...	[more]
XP_038902667.1	5.76e-68	90.24	uncharacterized protein LOC120089303 [Benincasa hispida]	[more]
XP_022947537.1	3.64e-65	87.30	uncharacterized protein LOC111451373 [Cucurbita moschata] >KAG6604915.1 hypothet...	[more]
XP_022971133.1	1.97e-64	87.20	uncharacterized protein LOC111469898 [Cucurbita maxima]	[more]

BLAST of Chy11G193000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G13500.1	5.4e-36	66.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G05310.1	3.0e-34	63.78	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36343	EXPRESSED PROTEIN	coord: 1..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G193000.1	Chy11G193000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane