Chy11G191990 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G191990
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase
Location	chrH11: 7266295 .. 7266731 (-)
RNA-Seq Expression	Chy11G191990
Synteny	Chy11G191990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGCAAAGCACCAAGCTGGGCTGATCAGTGGGGTTCAGGAAATTACGGAGTCGAAGACGACGACAACAACAATGCGGTCACAAAGAAAGGGAGCAGCAATGGGAATAGTAGCAAGAAGATGGCAGAGGTAAAGGCAGCAGCCTCAGCTGGATTTGTGAAGGCAAAGGCTATTGCAACTGTGGGTGCTCAAAAAGTGAAATCTGGAACTTCGGTAGGCATCAAATGGGTCAAGAATCAGTACCAGAAAAAGGTCTCCAAATGACTCTAAATATGTTTAGGTCTCCATTTGGTTTTTTTTTCATTCTTGGTCTTAAATATATAGTTCTGTAGTCTGATAACTTTTGTAGTCTTTTTTAGTTTCCTGCATTTTGTCGAACTCCTTTCCATAAACTTCAAACGACAAATGAGATATCATATCACAAATTGCTATAA

mRNA sequence

ATGGGAAGCAAAGCACCAAGCTGGGCTGATCAGTGGGGTTCAGGAAATTACGGAGTCGAAGACGACGACAACAACAATGCGGTCACAAAGAAAGGGAGCAGCAATGGGAATAGTAGCAAGAAGATGGCAGAGGTAAAGGCAGCAGCCTCAGCTGGATTTGTGAAGGCAAAGGCTATTGCAACTGTGGGTGCTCAAAAAGTGAAATCTGGAACTTCGTTTCCTGCATTTTGTCGAACTCCTTTCCATAAACTTCAAACGACAAATGAGATATCATATCACAAATTGCTATAA

Coding sequence (CDS)

ATGGGAAGCAAAGCACCAAGCTGGGCTGATCAGTGGGGTTCAGGAAATTACGGAGTCGAAGACGACGACAACAACAATGCGGTCACAAAGAAAGGGAGCAGCAATGGGAATAGTAGCAAGAAGATGGCAGAGGTAAAGGCAGCAGCCTCAGCTGGATTTGTGAAGGCAAAGGCTATTGCAACTGTGGGTGCTCAAAAAGTGAAATCTGGAACTTCGTTTCCTGCATTTTGTCGAACTCCTTTCCATAAACTTCAAACGACAAATGAGATATCATATCACAAATTGCTATAA

Protein sequence

MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAIATVGAQKVKSGTSFPAFCRTPFHKLQTTNEISYHKLL*

Homology

[Close]

BLAST of Chy11G191990 vs. ExPASy TrEMBL
Match: A0A5D3DKS5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00040 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.5e-28
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAIA 60
          MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKA+A
Sbjct: 1  MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAVA 60

Query: 61 TVGAQKVKSGTS 73
          TVGAQKVKSGTS
Sbjct: 61 TVGAQKVKSGTS 72

[Close]

BLAST of Chy11G191990 vs. ExPASy TrEMBL
Match: A0A0A0LR11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418340 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.5e-28
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1   MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAIA 60
           MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKA+A
Sbjct: 86  MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAVA 145

Query: 61  TVGAQKVKSGTS 73
           TVGAQKVKSGTS
Sbjct: 146 TVGAQKVKSGTS 157

[Close]

BLAST of Chy11G191990 vs. ExPASy TrEMBL
Match: A0A5C7HG95 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020628 PE=4 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 2.6e-17
Identity = 58/72 (80.56%), Postives = 63/72 (87.50%), Query Frame = 0


Query: 1  MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAIA 60
          MGSKAPSWADQWGSG++G E+DD N  VTKK SS+G SSKKMAE KAAASAGF KAKA A
Sbjct: 1  MGSKAPSWADQWGSGSFGDEEDD-NKLVTKK-SSSGGSSKKMAEAKAAASAGFDKAKAAA 60

Query: 61 TVGAQKVKSGTS 73
          +VGAQKVKSGTS
Sbjct: 61 SVGAQKVKSGTS 70

[Close]

BLAST of Chy11G191990 vs. ExPASy TrEMBL
Match: V4UEV4 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017336mg PE=4 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 6.6e-13
Identity = 48/72 (66.67%), Postives = 59/72 (81.94%), Query Frame = 0


Query: 1  MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAIA 60
          MGSKAPSWADQWG+G +GV+++D +  VTK  SS+G +  K+ EVKAAASAGF KAK+ A
Sbjct: 1  MGSKAPSWADQWGTGGFGVDEED-DKLVTKNASSSGGN--KITEVKAAASAGFDKAKSAA 60

Query: 61 TVGAQKVKSGTS 73
           VGAQKVK+GTS
Sbjct: 61 AVGAQKVKAGTS 69

[Close]

BLAST of Chy11G191990 vs. ExPASy TrEMBL
Match: A0A2G5E5C3 (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01100038v1 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 2.5e-12
Identity = 50/73 (68.49%), Postives = 57/73 (78.08%), Query Frame = 0


Query: 1  MGSKAPSWADQWGSGNYGVE-DDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAI 60
          M  +APSWADQWGSG YG + +DD+NN  TKKGSS   S KKMA++K+ ASAG  KAKA 
Sbjct: 1  MAKEAPSWADQWGSGGYGADPEDDHNN--TKKGSS--GSGKKMADMKSTASAGLDKAKAA 60

Query: 61 ATVGAQKVKSGTS 73
          A VGAQKVKSGTS
Sbjct: 61 AAVGAQKVKSGTS 69

[Close]

BLAST of Chy11G191990 vs. NCBI nr
Match: KAA0059574.1 (hypothetical protein E6C27_scaffold4837G00020 [Cucumis melo var. makuwa] >KAE8652289.1 hypothetical protein Csa_022099 [Cucumis sativus] >TYK24204.1 hypothetical protein E5676_scaffold27G00040 [Cucumis melo var. makuwa])

HSP 1 Score: 133 bits (334), Expect = 3.05e-38
Identity = 71/72 (98.61%), Postives = 72/72 (100.00%), Query Frame = 0


Query: 1  MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAIA 60
          MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKA+A
Sbjct: 1  MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAVA 60

Query: 61 TVGAQKVKSGTS 72
          TVGAQKVKSGTS
Sbjct: 61 TVGAQKVKSGTS 72

[Close]

BLAST of Chy11G191990 vs. NCBI nr
Match: KAG7010736.1 (hypothetical protein SDJN02_27532, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 115 bits (288), Expect = 3.04e-31
Identity = 64/72 (88.89%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 1  MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAIA 60
          MGSKAPSWADQWGSG+YGVEDDDN  A+TKKGSSNGNSSKKMA+VKAAASAGFVKAK+ A
Sbjct: 1  MGSKAPSWADQWGSGDYGVEDDDNT-AMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAA 60

Query: 61 TVGAQKVKSGTS 72
           VGAQKVKSGTS
Sbjct: 61 AVGAQKVKSGTS 71

[Close]

BLAST of Chy11G191990 vs. NCBI nr
Match: KAG6570886.1 (hypothetical protein SDJN03_29801, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 115 bits (288), Expect = 1.31e-30
Identity = 64/72 (88.89%), Postives = 68/72 (94.44%), Query Frame = 0


Query: 1  MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAIA 60
          MGSKAPSWADQWGSG+YGVEDDDN  A+TKKGSSNGNSSKKMA+VKAAASAGFVKAK+ A
Sbjct: 1  MGSKAPSWADQWGSGDYGVEDDDNT-AMTKKGSSNGNSSKKMADVKAAASAGFVKAKSAA 60

Query: 61 TVGAQKVKSGTS 72
           VGAQKVKSGTS
Sbjct: 61 AVGAQKVKSGTS 71

[Close]

BLAST of Chy11G191990 vs. NCBI nr
Match: KAG7034974.1 (hypothetical protein SDJN02_01767, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 112 bits (281), Expect = 4.47e-29
Identity = 63/72 (87.50%), Postives = 65/72 (90.28%), Query Frame = 0


Query: 1   MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAIA 60
           MGSKAPSWADQWGSGNYGVEDDD    V KKGSSNG+SSKKM EVKAAASAGFVKAKA+A
Sbjct: 91  MGSKAPSWADQWGSGNYGVEDDDK--MVAKKGSSNGSSSKKMTEVKAAASAGFVKAKAVA 150

Query: 61  TVGAQKVKSGTS 72
            VGAQKVKSGTS
Sbjct: 151 AVGAQKVKSGTS 160

[Close]

BLAST of Chy11G191990 vs. NCBI nr
Match: KAG6604861.1 (hypothetical protein SDJN03_02178, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 111 bits (277), Expect = 3.92e-28
Identity = 62/72 (86.11%), Postives = 64/72 (88.89%), Query Frame = 0


Query: 1   MGSKAPSWADQWGSGNYGVEDDDNNNAVTKKGSSNGNSSKKMAEVKAAASAGFVKAKAIA 60
           MGSKAPSWADQWGSGNYGVEDDD    V KKGS NG+SSKKM EVKAAASAGFVKAKA+A
Sbjct: 80  MGSKAPSWADQWGSGNYGVEDDDK--MVAKKGSGNGSSSKKMTEVKAAASAGFVKAKAVA 139

Query: 61  TVGAQKVKSGTS 72
            VGAQKVKSGTS
Sbjct: 140 AVGAQKVKSGTS 149

The following BLAST results are available for this feature:

BLAST of Chy11G191990 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G191990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DKS5	2.5e-28	98.61	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A0A0LR11	2.5e-28	98.61	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418340 PE=4 SV=1	[more]
A0A5C7HG95	2.6e-17	80.56	Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_020628 PE=4 SV=1	[more]
V4UEV4	6.6e-13	66.67	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10017336mg PE=4 ...	[more]
A0A2G5E5C3	2.5e-12	68.49	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_01100038v1 PE=4...	[more]

BLAST of Chy11G191990 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0059574.1	3.05e-38	98.61	hypothetical protein E6C27_scaffold4837G00020 [Cucumis melo var. makuwa] >KAE865...	[more]
KAG7010736.1	3.04e-31	88.89	hypothetical protein SDJN02_27532, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6570886.1	1.31e-30	88.89	hypothetical protein SDJN03_29801, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7034974.1	4.47e-29	87.50	hypothetical protein SDJN02_01767, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6604861.1	3.92e-28	86.11	hypothetical protein SDJN03_02178, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Chy11G191990 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 18..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..42
None	No IPR available	PANTHER	PTHR33386	OS02G0740600 PROTEIN	coord: 1..73
None	No IPR available	PANTHER	PTHR33386:SF13	ANKYRIN REPEAT PROTEIN	coord: 1..73

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G191990.1	Chy11G191990.1	mRNA