
Chy11G190930 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTAATTGGGATTTATTTCGACGAAATCATGAAGCTGATGATTATGTAAATTGAATAAGGTTATTAAATAAATGTTTCATGAGTTGTTTATCATTGAACTGGACTGGACTAAGTTTGATTGAATTAGAATGTTTTTGGATTGATGGTAACTGTTAAATTTGGCCATTAGGCTAGTACACCATATATGTACGATGTCCTTTGGGTTCACCACTTATAGACTATTGATTGTGTACTCCCACAAAATCAATACACTGACTGATGTGTGCTCCTACGAGATCACTAGACTATTATATGACATAAGAGTGCTTCTTTTACCTTTGTCTGAAAAACTAAACATAGATAGGTGAGTATATAAAATACTCAGTAATTGATCCACTATATGTCATATATGTCGACGAGTGACAAGAAGAACTCGTGACCATGCCAATGGGACTAGATATGATTGATGATTTTGCTTATTATTTTTATTTTTATTTGTATACTTTTTTAATGCTATGAACCTTTGGGTTAGTTGGTAATATGATTTATTTAAACTCTTGTTTTCTTTAATGAATTTATTAGGGGACCCGACTAAGTTTGTATCGTCTCAACTCCTTAAACTAAGCTAATGTCATTACTTTAAAATAAATAACAATTTTGACACTTTCTTGAAAATAGGAAAACTATATTTTTATCAAAATAATTTCAAATAACTGTTCGTAAAACACAGATTAGCAAAATCAATAAAAATTACCCTGAAAACATGTCTCAGGGTTCTAAAGGATTTTAAGAAAATAAAAATAATAAATGACATAAAAGCTTTAACATAAAATATTTAAAATGGAAATTCTGGAAAGCAAACAATGAAAGAGTTGAAGTAAAACTGAGTCCCCATATGACATGTCACGAAACTCTTCCTATCGCTCACCAGCTTCCCATTACCTCAATCTTTGCTTGAAATATTAAACATTGAAGAAAAAAACGAGTATAAAAATATACCCAGTAAGAGACCCACTAAGTGATCTGCTAACTTTTCATTAGGGTCCCATTAAGAGGTATCAAAGACTATCGTCTGCTCCATGGAACACAAATAATCTAGTGATCCCATAGGAACACTCTCATCTATCGACAAACCCGAAGGAACTCCCATGATATCAAGTTGTAAGTGATCCCGTCGGACCACTCATAAACATGACATGACAAACTAGTGGTCTCGTCGAATGCACACAGTCATAAATTTGTGAAAGGTGGTGATTTCAAGGAACACCGTACATGTAGGTACAAATCCTAATGGCCGAAGTGAATAGAGACATCACAATCCAAAGCATGTAGCAAACATCGTAAACATGGCAATTTCAGTCATAAAGTCCATAATCATATAATTCATAAAACATGCACACAATAATCATCATCATATAATATCAGCCATTAACTAACAACATCACATTATGCATTTTAGCTACCATCAATGAATAATAGTAAATACATGAAAATTTAAGTTCGAAGGTCCCGTAGTAGATTCTCTTATTTGAGAGATTAGTAAAAAAAGTAAAAATTCTCCAATTAATTCGATCTTAATCATAAAGGAAAATTTCAGTATATTAATTAATAAAATGACAAAAATTCTTTCAAATTAACTTACTAAAAAAGTAGGTTAAAACCAATTCAACCTTGCTTAAGAAAAATTCCAAGATTGCGTTTGGTTGGGATTTGAAAAAGATTATTAAAAAAAAAAAAAAAAAAACATCTTATATTAAAATTACAAAAATGTCCTCCATACTATACCCCTCCTCTCATCGTTCTGTCCATTTTTGATATACTCCTCCTACCATCTTTCTCCATAGCCAAAGCTTTTGTGCTCTCTCTTTATTTCTCAGGTATTTTTCAAACGATCTTTTATTCGAAACCCACTACTTTCTCATTCATCTCTCGATCATTACAAATCATACCTAGTTTTTAGTTTTTTTTTAATTCAGTGATTTTCTTATTCGATCATGCCGTTTTTTTTATGTTTCAGTGATTTTCTTATGCGGTTAGTGTATGCCGTTTTTTTTATGTTTCAGTGATTTTCTTATTCGGTTAGTATATGTTATTTTGATTTTGTTATCATTTTTAGTTTTTTTTTTTTTTTTTGTGGGATGATTTGCATCAAGTTTTTTATTATTAGAGAAATGAATTAGGAATTTCATTATTGCGAATGTTGTTTGGATTGTTTTGGAGGGGCTTCCCTTTGTAAATTCACTTTATCTATGAAATGCATATATGTATGTATCAATTATGCATAACCTTTTTAATTGGCTTTTAACTGTTCTCGAAGTAGTAAACCCCGTTTTTTCGTTAAAATGATTGGAGCATTGCTTCGAAAAGATGAGAAGATTTTTCAGCTTCACCTTTTTAGAAACTTCCAGTTTCACTCTCAGGCTTGCAAAGAACAATGGTATCTTCAATGAGAGAAAAATCTTTTGATTGGTTTTAAGAACCTTTTATCCTTCTGGCTATGTCAATAGTATAAAACACTCTTTTGGCCAATTAGAGTGCTTTACTGTTATCTCCTTTCCTCGGGAAATGCTCTTCAATAAAGATATATTATTTATTAGGAATGAAAATTATAATTAAATTCTTCTTAAATTAATATCTTGTAGGTTAAGCTTGAGGACCAATTAGATATTCTTTTAAAGATATTGTGGAGGTCATTTCAAGGATTTGTCCTCAAAGTAGTAGTGAAGGTAGTTCGTCTAGCCATGTAGAACAAAAGGATGAGATACATTTAAAGATACGGAGCATAATGATACTAATGATACAGAATATTTGATACATTCCGCTGAGGATTACATTCAAGGGAAAGGCAACAAAAAGAAAAAGAATATAATCAAAAAGTAATATTGCAAATAAACTTTGTGATCGATTGGAATGTGTGTGTGGATCAATAGAAAATAGGAGAAAAGATCTTCCCAGTTGGAGTATTTTTGAGGTAATGAATGTCTTACGAGACATACCCCATTACCTGGAATTGTAAAAGGCAATGAGCTTTTCACGAAAGCTGAAAGCTGCAAATATCTTTACAAAAATAATTTTACTAAATAAAATTATCAATTATGCCCAAACAATAATTCAACCCTCAATTGGGGATCCAATAGTAGAACTCTTATCGCGTAGGTTATGCTAATTTCCTTGCTGCAAAAATTCTCTTAACCCTCGAGAAAAAATTGATCACTTAATTCTCAAGATTTGCTAAATGAACCTTCCAACGACATATAACCAAAATCAATTTCAATAATAAATTTAATTTAGAGTCTCACTAACCTTTAATGGATATGAAAATCCCACAATAAAATTCATGTAAGTCACCAATCTTAACCAAAATCGGTGAGGGGTGATGATAAAGAGCAGATATCTTCAATATAGTAGGGGCGGTGACAGCTAGAGTTATTTTAGTAAAGAACGTGAAGAATTTTTTTTCAATTTAAGTTTTCCAGTACTATTTATAAACCTAAATAATAATACTTATTAGTAATTATTTATTTTTTCTTTTAGGATATATATATATATATATTTATTCCTATTCTCTCTTCTCAATCAATTCATGCACAAATCTCAAGCATTTATAACCATTAACATTAATATTAATAATAATATTAATAATAATAATAAATTATTATTATTATTATTCTCCCACCAAAATATAATAATATATATATATATATTTAAACCTTTATTTAATCTCCTAATTAAATCGATATCTTTATATCCAATCAAATCAATCATCTCTCCTTACTTATTTTCAAATAATTATAATTATATTTCATCATATAATTAATTATATTTTTTCATATTAATTATTTAAAAATAATAATAAATACAACTTTTTCTTTCGAGATTCAAATAAACTCAAAGTCTTAATTATTTTAATTATCGAAATATTTTCCAATAAATAAATTATTTCAAAATTTTATAAATTCCATTGTAGCTCAAACCTTCAAGATAGCACCTAGGTAATTTAAGACAATTAATAAAAATTCCTTAAAAATTTAGGATGTTACGTTTCTTTTTCCAAAATATAATTATCAATTTTTCTTTTAAATAAACCATATTTATTCTCTTTTCTAATTTACGTAATAATATCAATCTCTCTCCTCAATCAATATTTATATTCCTCCAAATAATTAATTATTTTCCACAATAATTAATTTTTCACAAATAAAATTATTTTTACCCTTTTACATAATAATTATATATATATAAATATATATAGTTAACCATAATTCTAACAACACCAAAGCCACTAATTAATTAAATATTCATTCAAAAAAATATTTAATTAATTTCAACTTTAACAAAAAAATCTCAATAAACTCAAACACAATTAAATAAAATTAAGATAATTAAATTAAAAATTACCATAATTTTTTCTGCTTTATAAAGTTGTTTTTAATTTTTAAATTCAATTATTTTAACACTTGTTTTTTTACTTAGGGCGTTACACATGGTGCCACCTGCGTTGTGCTGCATTTTTCCAACATCTTTTGGCCCCATTTTGACCTTTCCAAGGGGATATTATTGAGATGTGTTTCGCATGGCCTTACCTGCCTTGATAGTTCATTTCTTCAACTTTTAAAGTAGCAGCATTCTAAGGTGGGTTTCACTCCATTGCCTCCTACAACATCTCACAAATTTGCCTGGAGATATGACTTCATCCACGTTGTAATTTTGAGTTTTGAGCTTCTTGATTGTCTCCAACAACATAAAAGGTCTCTCATCATCATGTAGTGACAAATGTAACTCCACAATAATTAGCCTTATTCTAGACTCAAGTTAAACCATCTTGGCTTTGTTATACCACTCTTGTTGAAGAAATAGGCACAAAAGAAAGAGAGAGTCTCTATGAAAGAAATAAATAACGTTTATTAAGAACTTATAAAGATGAACACTCTTAGAGAATACTATTTCACTCTCTCAATACACTCACATACTTTTTCCTCCTAACTGATCTCTTGCTTTTCTTTCATCCTCCCTTTGCGCTTGCTTGCTTTACAAATGAGAACTCGATTCTTATTTATAGGTGTGAGACCCTTGAATCTCAAGCAAAATTAAAGCATCCCTCGATTGTTTTTTATCTAAATATCCAGATGGTTGGACAAAGTTCATTATCACTCAAATCAAGAACAAATAATTTATCAAATCTAACACAAAAAACTTACTTTAGTGGCAAGATTGGCTCGAACTCAAGTAGCACGTCAATTTTTAGCCAAATAGTTGAGCCTGAGAGTAACAAATGGGGATTTATTGATTGATTGATTGATTTATTATTTATTTTAGTTTGTTTGTTGGGTTAGGTATGAATATGACAATGCCACAACCTTTAATTTCAAACCACTTTTCATTAATTTCTGTGAAGCTACATTCCTCTGTCCCAAGTCCACATTGACTTACAAAGACTTCCACTTTGTATTTTAGATCTAATTCTTCTCCAAATCATTATTTGAGCTTTCTTTCTGAGAGAGAACCTTAGAATTGCACAATATGGCTGATTTCCTATGGACTTTTGCTGTGGAAGAAATGTTGAAGAAGGTGTTGAAGGTTGCAGGGGAGCAAACTGGCCTAGCATGGGGGTTCCAGGAACATCTCTCCAACCTCCAAAAATGGCTACTCATGGCTGAAGCCTTGTTACACGATTTTGATAAAACTGTATGGGTTTGTGTCTCTGAACCATTTATTGTCAACAAGATTTTGCTAGATATTTTGGAACATGTAAAAGGCGCCATTTCTAATGGAGGGAATAGTAAGGAAGTTTTACTCCGTGAACTCCAAAAAGAGATGCTTGGGCAAAGGTATTTTCTTGTGCTTGACGATGTTTGGAACGAAGATTATTTTCTATGGAATGAGTTGAAATATTGTTTACTCAACATCAGTGAAAACTCTAAGAATAGTATTGTTGTGACTACAAGAAGTGCTGAAGTTGCAAAAATCATGGGAACATGTCCCAATCATCTTTTAGGTAAATTATCTGATGATCAATGTTGGTCCTTGTTTAAAGAAAGTGCAAATGCATATGGACTATCAATGACTTCAAACTTGGGGATCATTCAAAAAGAGTTAGTAAAAAAAATTGGTGGTGTACCATTGGTTGCACGGGTTTTGGGAAAGCAATAA ATGATTAATTGGGATTTATTTCGACGAAATCATGAAGCTGATGATTATAGAACCTTAGAATTGCACAATATGGCTGATTTCCTATGGACTTTTGCTGTGGAAGAAATGTTGAAGAAGGTGTTGAAGGTTGCAGGGGAGCAAACTGGCCTAGCATGGGGGTTCCAGGAACATCTCTCCAACCTCCAAAAATGGCTACTCATGGCTGAAGCCTTGTTACACGATTTTGATAAAACTGTATGGGTTTGTGTCTCTGAACCATTTATTGTCAACAAGATTTTGCTAGATATTTTGGAACATGTAAAAGGCGCCATTTCTAATGGAGGGAATAGTAAGGAAGTTTTACTCCGTGAACTCCAAAAAGAGATGCTTGGGCAAAGGTATTTTCTTGTGCTTGACGATGTTTGGAACGAAGATTATTTTCTATGGAATGAGTTGAAATATTGTTTACTCAACATCAGTGAAAACTCTAAGAATAGTATTGTTGTGACTACAAGAAGTGCTGAAGTTGCAAAAATCATGGGAACATGTCCCAATCATCTTTTAGGTAAATTATCTGATGATCAATGTTGGTCCTTGTTTAAAGAAAGTGCAAATGCATATGGACTATCAATGACTTCAAACTTGGGGATCATTCAAAAAGAGTTAGTAAAAAAAATTGGTGGTGTACCATTGGTTGCACGGGTTTTGGGAAAGCAATAA ATGATTAATTGGGATTTATTTCGACGAAATCATGAAGCTGATGATTATAGAACCTTAGAATTGCACAATATGGCTGATTTCCTATGGACTTTTGCTGTGGAAGAAATGTTGAAGAAGGTGTTGAAGGTTGCAGGGGAGCAAACTGGCCTAGCATGGGGGTTCCAGGAACATCTCTCCAACCTCCAAAAATGGCTACTCATGGCTGAAGCCTTGTTACACGATTTTGATAAAACTGTATGGGTTTGTGTCTCTGAACCATTTATTGTCAACAAGATTTTGCTAGATATTTTGGAACATGTAAAAGGCGCCATTTCTAATGGAGGGAATAGTAAGGAAGTTTTACTCCGTGAACTCCAAAAAGAGATGCTTGGGCAAAGGTATTTTCTTGTGCTTGACGATGTTTGGAACGAAGATTATTTTCTATGGAATGAGTTGAAATATTGTTTACTCAACATCAGTGAAAACTCTAAGAATAGTATTGTTGTGACTACAAGAAGTGCTGAAGTTGCAAAAATCATGGGAACATGTCCCAATCATCTTTTAGGTAAATTATCTGATGATCAATGTTGGTCCTTGTTTAAAGAAAGTGCAAATGCATATGGACTATCAATGACTTCAAACTTGGGGATCATTCAAAAAGAGTTAGTAAAAAAAATTGGTGGTGTACCATTGGTTGCACGGGTTTTGGGAAAGCAATAA MINWDLFRRNHEADDYRTLELHNMADFLWTFAVEEMLKKVLKVAGEQTGLAWGFQEHLSNLQKWLLMAEALLHDFDKTVWVCVSEPFIVNKILLDILEHVKGAISNGGNSKEVLLRELQKEMLGQRYFLVLDDVWNEDYFLWNELKYCLLNISENSKNSIVVTTRSAEVAKIMGTCPNHLLGKLSDDQCWSLFKESANAYGLSMTSNLGIIQKELVKKIGGVPLVARVLGKQ* Homology
BLAST of Chy11G190930 vs. ExPASy Swiss-Prot
Match: Q7XA40 (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum OX=147425 GN=RGA3 PE=2 SV=2) HSP 1 Score: 120.6 bits (301), Expect = 2.4e-26 Identity = 68/172 (39.53%), Postives = 101/172 (58.72%), Query Frame = 0
BLAST of Chy11G190930 vs. ExPASy Swiss-Prot
Match: Q7XBQ9 (Disease resistance protein RGA2 OS=Solanum bulbocastanum OX=147425 GN=RGA2 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 3.5e-25 Identity = 65/172 (37.79%), Postives = 96/172 (55.81%), Query Frame = 0
BLAST of Chy11G190930 vs. ExPASy Swiss-Prot
Match: Q7XA42 (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum OX=147425 GN=RGA1 PE=2 SV=2) HSP 1 Score: 111.7 bits (278), Expect = 1.1e-23 Identity = 63/172 (36.63%), Postives = 96/172 (55.81%), Query Frame = 0
BLAST of Chy11G190930 vs. ExPASy Swiss-Prot
Match: Q7XA39 (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum OX=147425 GN=RGA4 PE=2 SV=1) HSP 1 Score: 96.7 bits (239), Expect = 3.8e-19 Identity = 60/172 (34.88%), Postives = 91/172 (52.91%), Query Frame = 0
BLAST of Chy11G190930 vs. ExPASy Swiss-Prot
Match: Q38834 (Disease resistance RPP13-like protein 4 OS=Arabidopsis thaliana OX=3702 GN=RPP13L4 PE=1 SV=2) HSP 1 Score: 84.7 bits (208), Expect = 1.5e-15 Identity = 54/162 (33.33%), Postives = 87/162 (53.70%), Query Frame = 0
BLAST of Chy11G190930 vs. ExPASy TrEMBL
Match: A0A5A7TMK8 (R-FOM-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold75G001070 PE=4 SV=1) HSP 1 Score: 303.9 bits (777), Expect = 5.7e-79 Identity = 185/377 (49.07%), Postives = 193/377 (51.19%), Query Frame = 0
BLAST of Chy11G190930 vs. ExPASy TrEMBL
Match: A0A0A0LCB5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G684170 PE=4 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 1.7e-78 Identity = 184/378 (48.68%), Postives = 196/378 (51.85%), Query Frame = 0
BLAST of Chy11G190930 vs. ExPASy TrEMBL
Match: Q2V727 (R-FOM-2 OS=Cucumis melo OX=3656 PE=4 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 1.7e-78 Identity = 184/377 (48.81%), Postives = 192/377 (50.93%), Query Frame = 0
BLAST of Chy11G190930 vs. ExPASy TrEMBL
Match: A0A5D3C5G4 (Putative disease resistance protein RGA3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold70G00190 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 6.3e-78 Identity = 183/377 (48.54%), Postives = 192/377 (50.93%), Query Frame = 0
BLAST of Chy11G190930 vs. ExPASy TrEMBL
Match: A0A1S3C9H9 (putative disease resistance protein RGA3 OS=Cucumis melo OX=3656 GN=LOC103498352 PE=4 SV=1) HSP 1 Score: 300.4 bits (768), Expect = 6.3e-78 Identity = 183/377 (48.54%), Postives = 192/377 (50.93%), Query Frame = 0
BLAST of Chy11G190930 vs. NCBI nr
Match: KAA0042414.1 (disease resistance protein RGA2-like [Cucumis melo var. makuwa] >TYK00998.1 disease resistance protein RGA2-like [Cucumis melo var. makuwa]) HSP 1 Score: 298 bits (762), Expect = 1.11e-93 Identity = 182/376 (48.40%), Postives = 191/376 (50.80%), Query Frame = 0
BLAST of Chy11G190930 vs. NCBI nr
Match: KAA0043027.1 (R-FOM-2 [Cucumis melo var. makuwa]) HSP 1 Score: 302 bits (773), Expect = 2.51e-93 Identity = 185/377 (49.07%), Postives = 193/377 (51.19%), Query Frame = 0
BLAST of Chy11G190930 vs. NCBI nr
Match: TYK06492.1 (putative disease resistance protein RGA3 [Cucumis melo var. makuwa]) HSP 1 Score: 298 bits (764), Expect = 5.23e-92 Identity = 183/377 (48.54%), Postives = 192/377 (50.93%), Query Frame = 0
BLAST of Chy11G190930 vs. NCBI nr
Match: XP_011650071.2 (disease resistance protein RGA2 [Cucumis sativus] >KAE8652352.1 hypothetical protein Csa_021786 [Cucumis sativus]) HSP 1 Score: 301 bits (771), Expect = 1.25e-91 Identity = 183/377 (48.54%), Postives = 193/377 (51.19%), Query Frame = 0
BLAST of Chy11G190930 vs. NCBI nr
Match: ABB91438.1 (R-FOM-2 [Cucumis melo]) HSP 1 Score: 300 bits (769), Expect = 2.47e-91 Identity = 184/377 (48.81%), Postives = 192/377 (50.93%), Query Frame = 0
BLAST of Chy11G190930 vs. TAIR 10
Match: AT3G50950.2 (HOPZ-ACTIVATED RESISTANCE 1 ) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-16 Identity = 54/162 (33.33%), Postives = 87/162 (53.70%), Query Frame = 0
BLAST of Chy11G190930 vs. TAIR 10
Match: AT3G50950.1 (HOPZ-ACTIVATED RESISTANCE 1 ) HSP 1 Score: 84.7 bits (208), Expect = 1.1e-16 Identity = 54/162 (33.33%), Postives = 87/162 (53.70%), Query Frame = 0
BLAST of Chy11G190930 vs. TAIR 10
Match: AT3G14470.1 (NB-ARC domain-containing disease resistance protein ) HSP 1 Score: 80.5 bits (197), Expect = 2.0e-15 Identity = 55/159 (34.59%), Postives = 82/159 (51.57%), Query Frame = 0
BLAST of Chy11G190930 vs. TAIR 10
Match: AT3G46730.1 (NB-ARC domain-containing disease resistance protein ) HSP 1 Score: 68.2 bits (165), Expect = 1.0e-11 Identity = 52/163 (31.90%), Postives = 80/163 (49.08%), Query Frame = 0
BLAST of Chy11G190930 vs. TAIR 10
Match: AT4G10780.1 (LRR and NB-ARC domains-containing disease resistance protein ) HSP 1 Score: 61.2 bits (147), Expect = 1.2e-09 Identity = 47/166 (28.31%), Postives = 79/166 (47.59%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|