Chy11G190890 (gene) Cucumber (hystrix) v1

Overview
NameChy11G190890
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Descriptioncalmodulin-binding protein 60 B-like isoform X2
LocationchrH11: 5539319 .. 5539546 (+)
RNA-Seq ExpressionChy11G190890
SyntenyChy11G190890
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAACCATGGATTAAGGTTGTTGTCGTCGATGAACTCAACGACGAGGAAGCAATAACTCAATCGGATTTCAACAGAAGTAGTGTGCCACAAAGGCTGGGAGAACGACCTTTGTTGATTGGTGATGATAAGAGTTTTCGTTTAGAAAATGGAGTTCATTCCATCACCAAGTTGTCATTCACTACAAACTCAAGCAGAAGCAGAACCAAAAATATCACAAGCGTCTAA

mRNA sequence

ATGAAACCATGGATTAAGGTTGTTGTCGTCGATGAACTCAACGACGAGGAAGCAATAACTCAATCGGATTTCAACAGAAGTAGTGTGCCACAAAGGCTGGGAGAACGACCTTTGTTGATTGGTGATGATAAGAGTTTTCGTTTAGAAAATGGAGTTCATTCCATCACCAAGTTGTCATTCACTACAAACTCAAGCAGAAGCAGAACCAAAAATATCACAAGCGTCTAA

Coding sequence (CDS)

ATGAAACCATGGATTAAGGTTGTTGTCGTCGATGAACTCAACGACGAGGAAGCAATAACTCAATCGGATTTCAACAGAAGTAGTGTGCCACAAAGGCTGGGAGAACGACCTTTGTTGATTGGTGATGATAAGAGTTTTCGTTTAGAAAATGGAGTTCATTCCATCACCAAGTTGTCATTCACTACAAACTCAAGCAGAAGCAGAACCAAAAATATCACAAGCGTCTAA

Protein sequence

MKPWIKVVVVDELNDEEAITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFTTNSSRSRTKNITSV*
Homology
[Close]
BLAST of Chy11G190890 vs. ExPASy TrEMBL
Match: A0A5D3CEA4 (Calmodulin-binding protein 60 B-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004380 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-23
Identity = 59/70 (84.29%), Postives = 64/70 (91.43%), Query Frame = 0 

Query: 4   WIKVVVVD-ELNDEEAITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFTT 63
           WI+VVV+D E +DEEAITQSDFNRS VPQRLGERPLL+GDDK FRLENGVHSIT LSFT 
Sbjct: 134 WIEVVVLDGEFDDEEAITQSDFNRSVVPQRLGERPLLVGDDKGFRLENGVHSITNLSFTR 193

Query: 64  NSSRSRTKNI 73
           NSSRSRTKN+
Sbjct: 194 NSSRSRTKNV 203

[Close]
BLAST of Chy11G190890 vs. ExPASy TrEMBL
Match: A0A1S3BPG1 (calmodulin-binding protein 60 B-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103492122 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-23
Identity = 59/70 (84.29%), Postives = 64/70 (91.43%), Query Frame = 0 

Query: 4   WIKVVVVD-ELNDEEAITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFTT 63
           WI+VVV+D E +DEEAITQSDFNRS VPQRLGERPLL+GDDK FRLENGVHSIT LSFT 
Sbjct: 180 WIEVVVLDGEFDDEEAITQSDFNRSVVPQRLGERPLLVGDDKGFRLENGVHSITNLSFTR 239

Query: 64  NSSRSRTKNI 73
           NSSRSRTKN+
Sbjct: 240 NSSRSRTKNV 249

[Close]
BLAST of Chy11G190890 vs. ExPASy TrEMBL
Match: A0A1S3BQH7 (calmodulin-binding protein 60 B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492122 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-23
Identity = 59/70 (84.29%), Postives = 64/70 (91.43%), Query Frame = 0 

Query: 4   WIKVVVVD-ELNDEEAITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFTT 63
           WI+VVV+D E +DEEAITQSDFNRS VPQRLGERPLL+GDDK FRLENGVHSIT LSFT 
Sbjct: 181 WIEVVVLDGEFDDEEAITQSDFNRSVVPQRLGERPLLVGDDKGFRLENGVHSITNLSFTR 240

Query: 64  NSSRSRTKNI 73
           NSSRSRTKN+
Sbjct: 241 NSSRSRTKNV 250

[Close]
BLAST of Chy11G190890 vs. ExPASy TrEMBL
Match: A0A1S3BPI6 (calmodulin-binding protein 60 B-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492122 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 3.2e-23
Identity = 59/70 (84.29%), Postives = 64/70 (91.43%), Query Frame = 0 

Query: 4   WIKVVVVD-ELNDEEAITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFTT 63
           WI+VVV+D E +DEEAITQSDFNRS VPQRLGERPLL+GDDK FRLENGVHSIT LSFT 
Sbjct: 181 WIEVVVLDGEFDDEEAITQSDFNRSVVPQRLGERPLLVGDDKGFRLENGVHSITNLSFTR 240

Query: 64  NSSRSRTKNI 73
           NSSRSRTKN+
Sbjct: 241 NSSRSRTKNV 250

[Close]
BLAST of Chy11G190890 vs. ExPASy TrEMBL
Match: A0A5D3CGD6 (Calmodulin-binding protein 60 B-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold16G004390 PE=3 SV=1)

HSP 1 Score: 102.4 bits (254), Expect = 8.3e-19
Identity = 55/69 (79.71%), Postives = 59/69 (85.51%), Query Frame = 0 

Query: 5   IKVVVVD-ELNDEEAITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFTTN 64
           I+VVV+D E NDEEAITQSDFNRS VPQRLGERPLL+G  K FRLENGV+SIT LSFT N
Sbjct: 156 IEVVVLDREFNDEEAITQSDFNRSVVPQRLGERPLLVGGHKRFRLENGVYSITDLSFTRN 215

Query: 65  SSRSRTKNI 73
           SSR RTK I
Sbjct: 216 SSRCRTKKI 224

[Close]
BLAST of Chy11G190890 vs. NCBI nr
Match: KAA0050940.1 (calmodulin-binding protein 60 B-like isoform X1 [Cucumis melo var. makuwa] >TYK10287.1 calmodulin-binding protein 60 B-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 117 bits (293), Expect = 2.70e-29
Identity = 59/70 (84.29%), Postives = 64/70 (91.43%), Query Frame = 0 

Query: 4   WIKVVVVD-ELNDEEAITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFTT 63
           WI+VVV+D E +DEEAITQSDFNRS VPQRLGERPLL+GDDK FRLENGVHSIT LSFT 
Sbjct: 134 WIEVVVLDGEFDDEEAITQSDFNRSVVPQRLGERPLLVGDDKGFRLENGVHSITNLSFTR 193

Query: 64  NSSRSRTKNI 72
           NSSRSRTKN+
Sbjct: 194 NSSRSRTKNV 203

[Close]
BLAST of Chy11G190890 vs. NCBI nr
Match: XP_008450562.1 (PREDICTED: calmodulin-binding protein 60 B-like isoform X2 [Cucumis melo])

HSP 1 Score: 117 bits (293), Expect = 6.85e-29
Identity = 59/70 (84.29%), Postives = 64/70 (91.43%), Query Frame = 0 

Query: 4   WIKVVVVD-ELNDEEAITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFTT 63
           WI+VVV+D E +DEEAITQSDFNRS VPQRLGERPLL+GDDK FRLENGVHSIT LSFT 
Sbjct: 181 WIEVVVLDGEFDDEEAITQSDFNRSVVPQRLGERPLLVGDDKGFRLENGVHSITNLSFTR 240

Query: 64  NSSRSRTKNI 72
           NSSRSRTKN+
Sbjct: 241 NSSRSRTKNV 250

[Close]
BLAST of Chy11G190890 vs. NCBI nr
Match: XP_008450563.1 (PREDICTED: calmodulin-binding protein 60 B-like isoform X3 [Cucumis melo])

HSP 1 Score: 117 bits (293), Expect = 6.85e-29
Identity = 59/70 (84.29%), Postives = 64/70 (91.43%), Query Frame = 0 

Query: 4   WIKVVVVD-ELNDEEAITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFTT 63
           WI+VVV+D E +DEEAITQSDFNRS VPQRLGERPLL+GDDK FRLENGVHSIT LSFT 
Sbjct: 180 WIEVVVLDGEFDDEEAITQSDFNRSVVPQRLGERPLLVGDDKGFRLENGVHSITNLSFTR 239

Query: 64  NSSRSRTKNI 72
           NSSRSRTKN+
Sbjct: 240 NSSRSRTKNV 249

[Close]
BLAST of Chy11G190890 vs. NCBI nr
Match: XP_008450560.1 (PREDICTED: calmodulin-binding protein 60 B-like isoform X1 [Cucumis melo])

HSP 1 Score: 117 bits (293), Expect = 6.91e-29
Identity = 59/70 (84.29%), Postives = 64/70 (91.43%), Query Frame = 0 

Query: 4   WIKVVVVD-ELNDEEAITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFTT 63
           WI+VVV+D E +DEEAITQSDFNRS VPQRLGERPLL+GDDK FRLENGVHSIT LSFT 
Sbjct: 181 WIEVVVLDGEFDDEEAITQSDFNRSVVPQRLGERPLLVGDDKGFRLENGVHSITNLSFTR 240

Query: 64  NSSRSRTKNI 72
           NSSRSRTKN+
Sbjct: 241 NSSRSRTKNV 250

[Close]
BLAST of Chy11G190890 vs. NCBI nr
Match: XP_011659631.1 (calmodulin-binding protein 60 C isoform X2 [Cucumis sativus] >KAE8653350.1 hypothetical protein Csa_007323 [Cucumis sativus])

HSP 1 Score: 108 bits (269), Expect = 1.21e-25
Identity = 59/69 (85.51%), Postives = 62/69 (89.86%), Query Frame = 0 

Query: 5   IKVVVVD-ELNDEEAITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFTTN 64
           I+VVV+D E ND EAITQSDFNRS VPQRLGER LLIGDDKSFRLENGV+SIT LSFTTN
Sbjct: 138 IEVVVLDGEFNDGEAITQSDFNRSIVPQRLGERLLLIGDDKSFRLENGVYSITNLSFTTN 197

Query: 65  SSRSRTKNI 72
           SSRSRTK I
Sbjct: 198 SSRSRTKKI 206

[Close]
BLAST of Chy11G190890 vs. TAIR 10
Match: AT2G24300.2 (Calmodulin-binding protein )

HSP 1 Score: 40.0 bits (92), Expect = 9.7e-04
Identity = 26/66 (39.39%), Postives = 40/66 (60.61%), Query Frame = 0 

Query: 7   VVVVDELNDE--EAITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFTTNS 66
           VV+  + NDE  E  T+  F    V +R G+RP+L GD +   L+ GV ++ +L+FT NS
Sbjct: 141 VVLEGDFNDEDDEDWTREHFESFEVKEREGKRPILTGDTQ-IVLKEGVGTLGELTFTDNS 200

Query: 67  SRSRTK 71
           S  R++
Sbjct: 201 SWIRSR 205

[Close]
BLAST of Chy11G190890 vs. TAIR 10
Match: AT2G24300.1 (Calmodulin-binding protein )

HSP 1 Score: 40.0 bits (92), Expect = 9.7e-04
Identity = 26/66 (39.39%), Postives = 40/66 (60.61%), Query Frame = 0 

Query: 7   VVVVDELNDE--EAITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFTTNS 66
           VV+  + NDE  E  T+  F    V +R G+RP+L GD +   L+ GV ++ +L+FT NS
Sbjct: 94  VVLEGDFNDEDDEDWTREHFESFEVKEREGKRPILTGDTQ-IVLKEGVGTLGELTFTDNS 153

Query: 67  SRSRTK 71
           S  R++
Sbjct: 154 SWIRSR 158

[Close]
BLAST of Chy11G190890 vs. TAIR 10
Match: AT4G31000.1 (Calmodulin-binding protein )

HSP 1 Score: 40.0 bits (92), Expect = 9.7e-04
Identity = 26/69 (37.68%), Postives = 43/69 (62.32%), Query Frame = 0 

Query: 5   IKVVVVD-ELNDEE--AITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFT 64
           + +VV+D + NDE+    T+  F    V +R G+RP+L G D+   ++ GV ++ KL+FT
Sbjct: 142 LNIVVLDGDFNDEDDKDWTREHFESFEVKEREGKRPILTG-DRHVIIKEGVGTLGKLTFT 201

Query: 65  TNSSRSRTK 71
            NSS  R++
Sbjct: 202 DNSSWIRSR 209

[Close]
BLAST of Chy11G190890 vs. TAIR 10
Match: AT4G31000.2 (Calmodulin-binding protein )

HSP 1 Score: 40.0 bits (92), Expect = 9.7e-04
Identity = 26/69 (37.68%), Postives = 43/69 (62.32%), Query Frame = 0 

Query: 5   IKVVVVD-ELNDEE--AITQSDFNRSSVPQRLGERPLLIGDDKSFRLENGVHSITKLSFT 64
           + +VV+D + NDE+    T+  F    V +R G+RP+L G D+   ++ GV ++ KL+FT
Sbjct: 137 LNIVVLDGDFNDEDDKDWTREHFESFEVKEREGKRPILTG-DRHVIIKEGVGTLGKLTFT 196

Query: 65  TNSSRSRTK 71
            NSS  R++
Sbjct: 197 DNSSWIRSR 204

The following BLAST results are available for this feature:
BLAST of Chy11G190890 vs.
Match NameE-valueIdentityDescription
BLAST of Chy11G190890 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CEA43.2e-2384.29Calmodulin-binding protein 60 B-like isoform X1 OS=Cucumis melo var. makuwa OX=1... [more]
A0A1S3BPG13.2e-2384.29calmodulin-binding protein 60 B-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BQH73.2e-2384.29calmodulin-binding protein 60 B-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A1S3BPI63.2e-2384.29calmodulin-binding protein 60 B-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... [more]
A0A5D3CGD68.3e-1979.71Calmodulin-binding protein 60 B-like isoform X2 OS=Cucumis melo var. makuwa OX=1... [more]
BLAST of Chy11G190890 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA0050940.12.70e-2984.29calmodulin-binding protein 60 B-like isoform X1 [Cucumis melo var. makuwa] >TYK1... [more]
XP_008450562.16.85e-2984.29PREDICTED: calmodulin-binding protein 60 B-like isoform X2 [Cucumis melo][more]
XP_008450563.16.85e-2984.29PREDICTED: calmodulin-binding protein 60 B-like isoform X3 [Cucumis melo][more]
XP_008450560.16.91e-2984.29PREDICTED: calmodulin-binding protein 60 B-like isoform X1 [Cucumis melo][more]
XP_011659631.11.21e-2585.51calmodulin-binding protein 60 C isoform X2 [Cucumis sativus] >KAE8653350.1 hypot... [more]
BLAST of Chy11G190890 vs. TAIR 10
Match NameE-valueIdentityDescription
AT2G24300.29.7e-0439.39Calmodulin-binding protein [more]
AT2G24300.19.7e-0439.39Calmodulin-binding protein [more]
AT4G31000.19.7e-0437.68Calmodulin-binding protein [more]
AT4G31000.29.7e-0437.68Calmodulin-binding protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012416CALMODULIN-BINDING PROTEIN60PFAMPF07887Calmodulin_bindcoord: 6..71
e-value: 1.5E-10
score: 40.9

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy11G190890.1Chy11G190890.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005516 calmodulin binding