Chy11G189980 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G189980
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	cold-regulated 413 plasma membrane protein 2-like
Location	chrH11: 4016102 .. 4018370 (-)
RNA-Seq Expression	Chy11G189980
Synteny	Chy11G189980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAACCCAACCACTTGAAAATGGTGACGGATTCTGACGCTGCCGATCTCATTTCCTCTGATCTCCGGGAACTCGGTAACGCTGCTAGAAAGCTTGCTACACACGCTGTTAAGCTCGGTGCTTCGGGTTTTACTGCTTCTTTTCTCCAATGGATTGCTTCCTTTGCTGCGATGTATGTTTTCCCCCCTATCTCTCTCTCTTTTCTGTTTGCCTGATTTCTAAATTTTGTTGATGTTGTTTGTTTGTGGTTCGTCGCTGCTGATCGGTTATTTTAGTGGAACTTTGTTTGTTGTGAGAAAGCTAATTGGTGATTTTGATTCGAGGAATTGTGTGTTTTGCGATTGATTTCTACTTGATTTTAGTAATTTATTTGTTGATTTATGTGATGAAGTGGTTAAAGAGTATTACTATGATTTAGTTAGGGAAATGATTCGTGTTACATTAAGATATGTGCTTCTGAGTGTTCTTTTTCGTGTGCCTTATTGATTAATCTACTTTTAGGTTTTCATAGATCGTTTTAATTTCACTTCGATTCTTTTTAACTGCAGTTACTTGTTGATTTTGGATCGGACGAACTGGAAGACGAATATCCTTACTTCATTGTTGATTCCGTACATTTTCTTTAGTCTTCCCGGTGTGATTTTCGGTTTTCTCAGGTGATCATCTCCACTCCGAGCAATTGCTTTCAAATGAAGCTTCTGCAATTGCGTTTTTTTTTTTTTTTTTTTTGGCTAAATTGCTTTCTCTTTGCAGGGGAGAGTTTGGAAAATGGGTTGCCGTCATTGCTGTTGTGCTCCGTCTCTTCTTCCCACGACGATTTCCAGGTAGTTTAGCCTCGACTTGATTAATGATTACACATTTATTGAATTCATTTTTGGTTAATAATAAGTACAGATTGTGCTAGCTGATAAGTATGTTGATATAGATTTAGAGCCATTAGTAGTTCTGATCTTCATTTAGAGATTTTTGGATGACTACCACAATCACTAGTTTTGCATTTTTGCTCTCTTCCCTTTTAGATTAACTTTCTACTTTATGAACTGCCTGCTTTTCTTTTTTAATTTGTTCCTTCACTTTTTTAAAAGTATTTTTTGAAATCTTAACTAAATTTGAAAAGAAATTTTATGTGGTTTTCTGAAAACTATGAGTTGCTTAATTTTATTACAAAAACTGTTTGGTAGGATAATGTTTATTTTGTTTCGAAAAAGATGTTTTTCCTTCCTATCACACATGTTCTTAATTTTTAAACAATATGTAAACAGGGAAACTGTTTTTGAACATGATTTTGAAAGACCCATCTCTTCTATTTTCAAACTCTTTAAGCATTGATGTAAACAAACAATTAACAAACAAAAATCCATTATCAAACCTTTTTAACATCTTTGAGGTTATGAAGTTTGACAGGAAGAACTTTATAGTAATCAATAGATCCAAAACTTTAGTTCAAATATAGTAAGTACCTTTAGGCATTTTGTATATCTTCAAAACTTACTTTCACATTTGTATTCCCAGCCCCAAGATAATTTGATTCACCAAAGTTAAAAGGAACAAACTACATGTCAAACCTCATGCATAATTATACACACTCCAATCTTACAAGTAAAAGGGATAATACCTTTTTTGGCCTGAAGATTTCATGTTTAGTTTATCCTAATTGACATTTGGTTTTAGGTTATTACAATTTTAACTTTGAGATTTTAGTTTTGTTTCAATTTGATAATTGACCCTAATTTTTTAATTTTCCATCTTGAATGTCACTAAGAGAAATGTAATTAATTAACATTCATTATTAATTAATTTAAAAATGTAAATTTTAAGGACGAAATTGGAACCAAACTCAAAACTTAACTTAGTATTATAAAACATTACGAAATTAGGGACCAAAATAGTTCTTTTTCCTTAAAAGTTCAAGTTAATAATAGTAATTTCACATCACATAATTAAGTTACAATCTATTATCCTGTGGAAGTATAATTATTGCATTCCATGCTCTGATTGTCTGGTAATACAGATTGGCTTGAATTGCCTGGAGCTTTGATACTTCTCATTGTGGTGGCTCCAAGTTTATTTGCCAAGACCATAAGAAACGACCCCATCGGAGAAGTAGTCTGTTTGATCATATCATGCTATTTACTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCATTCACAAAAGCAAATGGCATCTCAAACACCATCGGCATCATCCTTCTCTTCGTTTTCCCTGTCTGGGCACTGGTACTCCGTGTTCTTTGA

mRNA sequence

ATGGTGAAACCCAACCACTTGAAAATGGTGACGGATTCTGACGCTGCCGATCTCATTTCCTCTGATCTCCGGGAACTCGGTAACGCTGCTAGAAAGCTTGCTACACACGCTGTTAAGCTCGGTGCTTCGGGTTTTACTGCTTCTTTTCTCCAATGGATTGCTTCCTTTGCTGCGATTTACTTGTTGATTTTGGATCGGACGAACTGGAAGACGAATATCCTTACTTCATTGTTGATTCCGTACATTTTCTTTAGTCTTCCCGGTGTGATTTTCGGTTTTCTCAGGGGAGAGTTTGGAAAATGGGTTGCCGTCATTGCTGTTGTGCTCCGTCTCTTCTTCCCACGACGATTTCCAGATTGGCTTGAATTGCCTGGAGCTTTGATACTTCTCATTGTGGTGGCTCCAAGTTTATTTGCCAAGACCATAAGAAACGACCCCATCGGAGAAGTAGTCTGTTTGATCATATCATGCTATTTACTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCATTCACAAAAGCAAATGGCATCTCAAACACCATCGGCATCATCCTTCTCTTCGTTTTCCCTGTCTGGGCACTGGTACTCCGTGTTCTTTGA

Coding sequence (CDS)

ATGGTGAAACCCAACCACTTGAAAATGGTGACGGATTCTGACGCTGCCGATCTCATTTCCTCTGATCTCCGGGAACTCGGTAACGCTGCTAGAAAGCTTGCTACACACGCTGTTAAGCTCGGTGCTTCGGGTTTTACTGCTTCTTTTCTCCAATGGATTGCTTCCTTTGCTGCGATTTACTTGTTGATTTTGGATCGGACGAACTGGAAGACGAATATCCTTACTTCATTGTTGATTCCGTACATTTTCTTTAGTCTTCCCGGTGTGATTTTCGGTTTTCTCAGGGGAGAGTTTGGAAAATGGGTTGCCGTCATTGCTGTTGTGCTCCGTCTCTTCTTCCCACGACGATTTCCAGATTGGCTTGAATTGCCTGGAGCTTTGATACTTCTCATTGTGGTGGCTCCAAGTTTATTTGCCAAGACCATAAGAAACGACCCCATCGGAGAAGTAGTCTGTTTGATCATATCATGCTATTTACTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCATTCACAAAAGCAAATGGCATCTCAAACACCATCGGCATCATCCTTCTCTTCGTTTTCCCTGTCTGGGCACTGGTACTCCGTGTTCTTTGA

Protein sequence

MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIYLLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDWLELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANGISNTIGIILLFVFPVWALVLRVL*

Homology

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BLAST of Chy11G189980 vs. ExPASy Swiss-Prot
Match: Q9SVL6 (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 1.7e-68
Identity = 132/203 (65.02%), Postives = 160/203 (78.82%), Query Frame = 0


Query: 1   MVKPNHLKMVTDS-DAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAI 60
           M + ++L M TD  D   L++SD+ EL  AA+KL +   KLG  GF  SFL+++ASFAAI
Sbjct: 1   MGRMDYLAMKTDDVDTVALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFLASFAAI 60

Query: 61  YLLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPD 120
           YLLILDRTNWKT +LTSLLIPYIF SLP VIF FL G+ GKW+A +AVVLRLFFP+ FPD
Sbjct: 61  YLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPD 120

Query: 121 WLELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANG 180
           WLE+PG+LILL+VV+P   A  IR   IG V+ L I CYLLQEHIRASGGFRNSFT+  G
Sbjct: 121 WLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRG 180

Query: 181 ISNTIGIILLFVFPVWALVLRVL 203
           +SNT+GIILL V+PVWAL++RV+
Sbjct: 181 VSNTLGIILLLVYPVWALIVRVM 203

[Close]

BLAST of Chy11G189980 vs. ExPASy Swiss-Prot
Match: O23164 (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 250.8 bits (639), Expect = 1.4e-65
Identity = 119/201 (59.20%), Postives = 154/201 (76.62%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           M +   L M T+ +AA+LI+SD+ E   AA+KL      LG  GF  S LQW AS  AIY
Sbjct: 1   MGRGEFLAMKTEENAANLINSDMNEFVAAAKKLVKDVGMLGGVGFGTSVLQWAASIFAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKT +LT+LL+PYIFF+LP VIF F  G+FGKW+A+IA+++RLFFP+ FP+W
Sbjct: 61  LLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFFPKEFPEW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LE+P ALIL++VV+PSL A T+R   +G V+CL+I+CYL  EHI+ASGGF+NSFT+ NGI
Sbjct: 121 LEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQKNGI 180

Query: 181 SNTIGIILLFVFPVWALVLRV 202
           SNTIGI+ L V+PVW +   +
Sbjct: 181 SNTIGIVALLVYPVWTIFFHI 201

[Close]

BLAST of Chy11G189980 vs. ExPASy Swiss-Prot
Match: Q9XIM7 (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 6.7e-65
Identity = 124/181 (68.51%), Postives = 145/181 (80.11%), Query Frame = 0


Query: 18  LISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIYLLILDRTNWKTNILTSL 77
           +I SD  EL  AA+ LATHA  L   GF  S L+W+AS AAIYLL+LDRTNWKTN+LTSL
Sbjct: 16  MIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKTNMLTSL 75

Query: 78  LIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDWLELPGALILLIVVAPSL 137
           LIPYIFFSLP +IFG  RGE GKW+A +AVV++LFFP+   ++LELP AL+LL VVAP+L
Sbjct: 76  LIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNL 135

Query: 138 FAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANGISNTIGIILLFVFPVWAL 197
            A T R+  IG  +CL I CYLLQEHIRASGGFRN+FTKANGISNT+GII L VFPVWAL
Sbjct: 136 IAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISNTVGIICLVVFPVWAL 195

Query: 198 V 199
           +
Sbjct: 196 I 196

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BLAST of Chy11G189980 vs. ExPASy Swiss-Prot
Match: O64834 (Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=At2g23680 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 6.2e-34
Identity = 75/150 (50.00%), Postives = 104/150 (69.33%), Query Frame = 0


Query: 49  FLQWIASFAAIYLLILDRTNWK--TNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIA 108
           FL+W+AS  A++L+ILD+T WK   NI+ SLL PY+F SLP VIF  LR   GKW+A++ 
Sbjct: 30  FLRWLASIVAVFLMILDQTKWKYSNNIMASLLAPYLFSSLPIVIFQVLRNGVGKWIALLT 89

Query: 109 VVLRLFFPRRFPDWLELPGALILLIVVAPSLFAKTIRND--PIGEVVCLIISCYLLQEHI 168
           V+LRLF P  F + LE+PGA ILLIVV PS      R+D    G  VCL+ S YL+ +H 
Sbjct: 90  VILRLFLPNHFHESLEIPGATILLIVVTPSDIGAIFRDDLRYTGGDVCLLTSFYLINKHT 149

Query: 169 RASGGFRNSFTKANGISNTIGIILLFVFPV 195
           +A GG +NSFT+ + ++ +I + +LFV+P+
Sbjct: 150 KACGGIKNSFTQKDKVTYSICLWILFVYPI 179

[Close]

BLAST of Chy11G189980 vs. ExPASy Swiss-Prot
Match: Q94AL8 (Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM1 PE=1 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.3e-12
Identity = 52/183 (28.42%), Postives = 94/183 (51.37%), Query Frame = 0


Query: 5   NHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIYLLIL 64
           N L++  D      +S+ + +     R+    +V   A+  +A+ LQWI++ + + L++ 
Sbjct: 45  NPLRLSGDRQRTATVSTRVEK-----RRKRGSSVVCYAAPISANSLQWISTISCLALMLA 104

Query: 65  DRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDWLELP 124
                 T I  S+++P      P  I  +++GE+G W A +A++ RLFF   FP  LELP
Sbjct: 105 R----GTGIHKSVVVPLFALHAPSSIVAWIKGEYGVWAAFLALIARLFF--TFPGELELP 164

Query: 125 GALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANGISNTI 184
              +LL++VAP      IR    G ++ + IS +L  +H   +G    ++ K + ++ T+
Sbjct: 165 FIALLLVIVAP-YQVMNIRGKQEGAIIAIAISGFLAFQHFSRAGSLEKAYEKGSVLA-TV 214

Query: 185 GII 188
            II
Sbjct: 225 AII 214

[Close]

BLAST of Chy11G189980 vs. ExPASy TrEMBL
Match: A0A0A0LIW2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238250 PE=3 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 2.4e-105
Identity = 199/202 (98.51%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGF RGEFGKWVAVIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPSLFAKTIRNDPIGE +CLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 203
           SNTIGIILLFVFPVWALVLRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of Chy11G189980 vs. ExPASy TrEMBL
Match: A0A1S3CAX8 (cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC103498423 PE=3 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 5.9e-104
Identity = 197/202 (97.52%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPG+IFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPSLFA TIRND IGE +CLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 203
           SNTIGIILLFVFPVWALVLRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of Chy11G189980 vs. ExPASy TrEMBL
Match: A0A5A7TUZ7 (Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005140 PE=3 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 7.7e-104
Identity = 196/202 (97.03%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPG+IFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPSLFA T+RND IGE +CLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFASTVRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 203
           SNTIGIILLFVFPVWALVLRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of Chy11G189980 vs. ExPASy TrEMBL
Match: A0A5D3CTU9 (Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001230 PE=3 SV=1)

HSP 1 Score: 379.0 bits (972), Expect = 1.2e-101
Identity = 196/208 (94.23%), Postives = 199/208 (95.67%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAI- 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAA+ 
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAMY 60

Query: 61  -----YLLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFP 120
                YLLILDRTNWKTNILTSLLIPYIFFSLPG+IFGFLRGEFGKWVAVIAVVLRLFFP
Sbjct: 61  XXXSRYLLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFP 120

Query: 121 RRFPDWLELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSF 180
           RRFPDWLELPGALILLIVVAPSLFA TIRND IGE +CLIISCYLLQEHIRASGGFRNSF
Sbjct: 121 RRFPDWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSF 180

Query: 181 TKANGISNTIGIILLFVFPVWALVLRVL 203
           TKANGISNTIGIILLFVFPVWALVLRVL
Sbjct: 181 TKANGISNTIGIILLFVFPVWALVLRVL 208

[Close]

BLAST of Chy11G189980 vs. ExPASy TrEMBL
Match: A0A6J1FVU6 (cold-regulated 413 plasma membrane protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111448574 PE=3 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 6.3e-98
Identity = 185/202 (91.58%), Postives = 195/202 (96.53%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKP++LKMVTDSDAADLIS+DLRELGNAA+KLATHAV+LGASGF A+FLQW+ASFAAIY
Sbjct: 1   MVKPSYLKMVTDSDAADLISNDLRELGNAAKKLATHAVQLGASGFPAAFLQWLASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPGVIF FLRGEFGKWVA IAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFFFLRGEFGKWVAAIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAP LFA T+RND IGE +CLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPGLFASTMRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 203
           SNTIGIILLFVFPVWALV+RVL
Sbjct: 181 SNTIGIILLFVFPVWALVVRVL 202

[Close]

BLAST of Chy11G189980 vs. NCBI nr
Match: XP_004145347.1 (cold-regulated 413 plasma membrane protein 2 [Cucumis sativus] >KGN61758.1 hypothetical protein Csa_006288 [Cucumis sativus])

HSP 1 Score: 388 bits (996), Expect = 1.19e-135
Identity = 199/202 (98.51%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGF RGEFGKWVAVIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPSLFAKTIRNDPIGE +CLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 202
           SNTIGIILLFVFPVWALVLRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of Chy11G189980 vs. NCBI nr
Match: XP_008459238.1 (PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo])

HSP 1 Score: 383 bits (984), Expect = 8.03e-134
Identity = 197/202 (97.52%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPG+IFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPSLFA TIRND IGE +CLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 202
           SNTIGIILLFVFPVWALVLRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of Chy11G189980 vs. NCBI nr
Match: KAA0045966.1 (cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 383 bits (983), Expect = 1.14e-133
Identity = 196/202 (97.03%), Postives = 199/202 (98.51%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPG+IFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPSLFA T+RND IGE +CLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFASTVRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 202
           SNTIGIILLFVFPVWALVLRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of Chy11G189980 vs. NCBI nr
Match: TYK13619.1 (cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 375 bits (964), Expect = 1.11e-130
Identity = 196/208 (94.23%), Postives = 199/208 (95.67%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAA+Y
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAMY 60

Query: 61  ------LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFP 120
                 LLILDRTNWKTNILTSLLIPYIFFSLPG+IFGFLRGEFGKWVAVIAVVLRLFFP
Sbjct: 61  XXXSRYLLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFP 120

Query: 121 RRFPDWLELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSF 180
           RRFPDWLELPGALILLIVVAPSLFA TIRND IGE +CLIISCYLLQEHIRASGGFRNSF
Sbjct: 121 RRFPDWLELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSF 180

Query: 181 TKANGISNTIGIILLFVFPVWALVLRVL 202
           TKANGISNTIGIILLFVFPVWALVLRVL
Sbjct: 181 TKANGISNTIGIILLFVFPVWALVLRVL 208

[Close]

BLAST of Chy11G189980 vs. NCBI nr
Match: XP_038902783.1 (cold-regulated 413 plasma membrane protein 2-like [Benincasa hispida])

HSP 1 Score: 372 bits (956), Expect = 1.49e-129
Identity = 192/202 (95.05%), Postives = 196/202 (97.03%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           MVKPN+LKMVTDSDAADLISSDLRELGNAA+KLATHAVKL ASGF ASFLQWIASFAAIY
Sbjct: 1   MVKPNYLKMVTDSDAADLISSDLRELGNAAKKLATHAVKLCASGFAASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPSLFA TIR D IGE +CLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFAHTIRGDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIILLFVFPVWALVLRVL 202
           SNTIGI+LLFVFPVWALVLRVL
Sbjct: 181 SNTIGIVLLFVFPVWALVLRVL 202

[Close]

BLAST of Chy11G189980 vs. TAIR 10
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2 )

HSP 1 Score: 260.4 bits (664), Expect = 1.2e-69
Identity = 132/203 (65.02%), Postives = 160/203 (78.82%), Query Frame = 0


Query: 1   MVKPNHLKMVTDS-DAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAI 60
           M + ++L M TD  D   L++SD+ EL  AA+KL +   KLG  GF  SFL+++ASFAAI
Sbjct: 1   MGRMDYLAMKTDDVDTVALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFLASFAAI 60

Query: 61  YLLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPD 120
           YLLILDRTNWKT +LTSLLIPYIF SLP VIF FL G+ GKW+A +AVVLRLFFP+ FPD
Sbjct: 61  YLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPD 120

Query: 121 WLELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANG 180
           WLE+PG+LILL+VV+P   A  IR   IG V+ L I CYLLQEHIRASGGFRNSFT+  G
Sbjct: 121 WLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRG 180

Query: 181 ISNTIGIILLFVFPVWALVLRVL 203
           +SNT+GIILL V+PVWAL++RV+
Sbjct: 181 VSNTLGIILLLVYPVWALIVRVM 203

[Close]

BLAST of Chy11G189980 vs. TAIR 10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 250.8 bits (639), Expect = 9.7e-67
Identity = 119/201 (59.20%), Postives = 154/201 (76.62%), Query Frame = 0


Query: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60
           M +   L M T+ +AA+LI+SD+ E   AA+KL      LG  GF  S LQW AS  AIY
Sbjct: 1   MGRGEFLAMKTEENAANLINSDMNEFVAAAKKLVKDVGMLGGVGFGTSVLQWAASIFAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120
           LLILDRTNWKT +LT+LL+PYIFF+LP VIF F  G+FGKW+A+IA+++RLFFP+ FP+W
Sbjct: 61  LLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFFPKEFPEW 120

Query: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LE+P ALIL++VV+PSL A T+R   +G V+CL+I+CYL  EHI+ASGGF+NSFT+ NGI
Sbjct: 121 LEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQKNGI 180

Query: 181 SNTIGIILLFVFPVWALVLRV 202
           SNTIGI+ L V+PVW +   +
Sbjct: 181 SNTIGIVALLVYPVWTIFFHI 201

[Close]

BLAST of Chy11G189980 vs. TAIR 10
Match: AT2G15970.1 (cold regulated 413 plasma membrane 1 )

HSP 1 Score: 248.4 bits (633), Expect = 4.8e-66
Identity = 124/181 (68.51%), Postives = 145/181 (80.11%), Query Frame = 0


Query: 18  LISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIYLLILDRTNWKTNILTSL 77
           +I SD  EL  AA+ LATHA  L   GF  S L+W+AS AAIYLL+LDRTNWKTN+LTSL
Sbjct: 16  MIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKTNMLTSL 75

Query: 78  LIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDWLELPGALILLIVVAPSL 137
           LIPYIFFSLP +IFG  RGE GKW+A +AVV++LFFP+   ++LELP AL+LL VVAP+L
Sbjct: 76  LIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNL 135

Query: 138 FAKTIRNDPIGEVVCLIISCYLLQEHIRASGGFRNSFTKANGISNTIGIILLFVFPVWAL 197
            A T R+  IG  +CL I CYLLQEHIRASGGFRN+FTKANGISNT+GII L VFPVWAL
Sbjct: 136 IAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISNTVGIICLVVFPVWAL 195

Query: 198 V 199
           +
Sbjct: 196 I 196

[Close]

BLAST of Chy11G189980 vs. TAIR 10
Match: AT2G15970.2 (cold regulated 413 plasma membrane 1 )

HSP 1 Score: 171.0 bits (432), Expect = 9.7e-43
Identity = 86/136 (63.24%), Postives = 104/136 (76.47%), Query Frame = 0


Query: 18  LISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIYLLILDRTNWKTNILTSL 77
           +I SD  EL  AA+ LATHA  L   GF  S L+W+AS AAIYLL+LDRTNWKTN+LTSL
Sbjct: 16  MIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKTNMLTSL 75

Query: 78  LIPYIFFSLPGVIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDWLELPGALILLIVVAPSL 137
           LIPYIFFSLP +IFG  RGE GKW+A +AVV++LFFP+   ++LELP AL+LL VVAP+L
Sbjct: 76  LIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNL 135

Query: 138 FAKTIRNDPIGEVVCL 154
            A T R+  IG  +CL
Sbjct: 136 IAGTFRDSWIGLAICL 151

[Close]

BLAST of Chy11G189980 vs. TAIR 10
Match: AT2G23680.1 (Cold acclimation protein WCOR413 family )

HSP 1 Score: 145.6 bits (366), Expect = 4.4e-35
Identity = 75/150 (50.00%), Postives = 104/150 (69.33%), Query Frame = 0


Query: 49  FLQWIASFAAIYLLILDRTNWK--TNILTSLLIPYIFFSLPGVIFGFLRGEFGKWVAVIA 108
           FL+W+AS  A++L+ILD+T WK   NI+ SLL PY+F SLP VIF  LR   GKW+A++ 
Sbjct: 30  FLRWLASIVAVFLMILDQTKWKYSNNIMASLLAPYLFSSLPIVIFQVLRNGVGKWIALLT 89

Query: 109 VVLRLFFPRRFPDWLELPGALILLIVVAPSLFAKTIRND--PIGEVVCLIISCYLLQEHI 168
           V+LRLF P  F + LE+PGA ILLIVV PS      R+D    G  VCL+ S YL+ +H 
Sbjct: 90  VILRLFLPNHFHESLEIPGATILLIVVTPSDIGAIFRDDLRYTGGDVCLLTSFYLINKHT 149

Query: 169 RASGGFRNSFTKANGISNTIGIILLFVFPV 195
           +A GG +NSFT+ + ++ +I + +LFV+P+
Sbjct: 150 KACGGIKNSFTQKDKVTYSICLWILFVYPI 179

The following BLAST results are available for this feature:

BLAST of Chy11G189980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SVL6	1.7e-68	65.02	Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O23164	1.4e-65	59.20	Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9XIM7	6.7e-65	68.51	Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
O64834	6.2e-34	50.00	Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q94AL8	2.3e-12	28.42	Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thalia...	[more]

BLAST of Chy11G189980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIW2	2.4e-105	98.51	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238250 PE=3 SV=1	[more]
A0A1S3CAX8	5.9e-104	97.52	cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
A0A5A7TUZ7	7.7e-104	97.03	Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. m...	[more]
A0A5D3CTU9	1.2e-101	94.23	Cold-regulated 413 plasma membrane protein 2-like protein OS=Cucumis melo var. m...	[more]
A0A6J1FVU6	6.3e-98	91.58	cold-regulated 413 plasma membrane protein 2 OS=Cucurbita moschata OX=3662 GN=LO...	[more]

BLAST of Chy11G189980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145347.1	1.19e-135	98.51	cold-regulated 413 plasma membrane protein 2 [Cucumis sativus] >KGN61758.1 hypot...	[more]
XP_008459238.1	8.03e-134	97.52	PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo]	[more]
KAA0045966.1	1.14e-133	97.03	cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. mak...	[more]
TYK13619.1	1.11e-130	94.23	cold-regulated 413 plasma membrane protein 2-like protein [Cucumis melo var. mak...	[more]
XP_038902783.1	1.49e-129	95.05	cold-regulated 413 plasma membrane protein 2-like [Benincasa hispida]	[more]

BLAST of Chy11G189980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50830.1	1.2e-69	65.02	cold-regulated 413-plasma membrane 2	[more]
AT4G37220.1	9.7e-67	59.20	Cold acclimation protein WCOR413 family	[more]
AT2G15970.1	4.8e-66	68.51	cold regulated 413 plasma membrane 1	[more]
AT2G15970.2	9.7e-43	63.24	cold regulated 413 plasma membrane 1	[more]
AT2G23680.1	4.4e-35	50.00	Cold acclimation protein WCOR413 family	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008892	Cold-regulated 413 protein	PFAM	PF05562	WCOR413	coord: 9..189 e-value: 1.0E-89 score: 299.4
IPR008892	Cold-regulated 413 protein	PANTHER	PTHR33596	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2	coord: 1..201
None	No IPR available	PANTHER	PTHR33596:SF18	COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED	coord: 1..201

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G189980.1	Chy11G189980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane