Chy11G189820 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G189820
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH11: 3904737 .. 3906236 (+)
RNA-Seq Expression	Chy11G189820
Synteny	Chy11G189820

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCGGTCCGTTGCTTAAACGAACCCTCCGCCCGATCGGAAACTCCACCGTTCAACTCCAATTTTCCTCTTCCTTTTCCTCATCCTCACCCCCCACCGAGCCTTCGCCGTCGACGAAACCCTCAATCTCCACCGTCGTTTCAGTTCTCACTCACCAGCGCTCAAAATCCCGCTGGCGATTCCTCAACTCCCTCTGTCCCAATGGCTTCGATCCCGGCGAGTTTTCCGATATCCTTCTCCAAATCAAGAACAATCCTCATCTCGCCCTCCGTTTCTTCCTCTGGACTCAGAACAAATCCCTCTGCAATCACAATCTCATTTCTTACTCGACCCTCATTCACATCCTTGCTCGCGGTCGACTCAGAACTCACGCCAAGGATGTTATTCAAACTGCCATTAGGGCTGCGGAGCTCGAAGATAGCGATAATTATTCTAACTCTGAGCGGTTTTCTTCTTCGAGGCCTTTGAAGCTTTTTGAAACCCTCGTCAAGACGTATAAACGGTGTGGCTCTGCTCCATTTGTGTTTGATTTATTGATTAAAGCTCTTCTGGAATCTAAAAAGCTCGATTCATCCATTGAAATTGTTAGAATGTTACGGTCTCGTGGGATTAGCCCACAAGTTAGTACGTTGAATTCGTTGATTTTGTTGGTGTCAAAATGCCAGGGGGCTAATGTAGCTTATGCAATTTTTAGAGAGGTTTTTGGTTTAGGTTGTGAAATTGAGGAAGAACATGTGAAATTGAAGGGTAGAGTTAGTCCTAATGTTCATACTTTTAACACATTAATGGACTGTTTTTATCAAGATGGGTTTGTAGGGAGGGTGAAGGAGATTTGGGATCAATTAGCAGATTCAAATTCAACTCCAAACAGCTATAGTTATAGTATTCTAATGACAGTTTTATGTGAAGAGAGAAGAACGGGAGAAGCAGAGGAGTTGTGGGAAGAAATGAAAATGAAGAAGTTGGAGCCTGATGTTGTAGCTTACAATACGATAATTGGAGGATTTTGTAAAGCAGGACATACTCATAGAGCTGAAGAGTTCTATAGAGAAATGGAACTCAGTGGAATAGAGAGTACTTTCTCCACCCTTGAACATCTCATCAATGGCTATTGTGATACTGGAGATGTTGATTCTGCATTACTTGTGTATAAGGATATGCGTAGGAAACAGTTTAGTCTCAACGCATCGATGCTTGAAGGACTTATTAGAATGTTGTGTGCTGAGAGAAGGCTTTTAGAAGCTTTAGATGTTTTTGGTTTTGCCATTGAATACTCTAGCTTTTGTCCTACAATGGAAACTTTTGAAATTCTGATAAATGAGTTGTGTCAAGAAGGGAAAATTGAAGGTGCATTTAAGCTTCAAGCGCAGATGGTAGGGAAAGGTTTTAAGCCAAATTTGAAGATTTATCAATCATTTATCGATGCTTACACAAAAGAAGGAAATGCAGAAATGGTTGAGGAATTGTGGAAGGAAATGCATGAAATCCAGCTGAGTTGA

mRNA sequence

ATGTCCGGTCCGTTGCTTAAACGAACCCTCCGCCCGATCGGAAACTCCACCGTTCAACTCCAATTTTCCTCTTCCTTTTCCTCATCCTCACCCCCCACCGAGCCTTCGCCGTCGACGAAACCCTCAATCTCCACCGTCGTTTCAGTTCTCACTCACCAGCGCTCAAAATCCCGCTGGCGATTCCTCAACTCCCTCTGTCCCAATGGCTTCGATCCCGGCGAGTTTTCCGATATCCTTCTCCAAATCAAGAACAATCCTCATCTCGCCCTCCGTTTCTTCCTCTGGACTCAGAACAAATCCCTCTGCAATCACAATCTCATTTCTTACTCGACCCTCATTCACATCCTTGCTCGCGGTCGACTCAGAACTCACGCCAAGGATGTTATTCAAACTGCCATTAGGGCTGCGGAGCTCGAAGATAGCGATAATTATTCTAACTCTGAGCGGTTTTCTTCTTCGAGGCCTTTGAAGCTTTTTGAAACCCTCGTCAAGACGTATAAACGGTGTGGCTCTGCTCCATTTGTGTTTGATTTATTGATTAAAGCTCTTCTGGAATCTAAAAAGCTCGATTCATCCATTGAAATTGTTAGAATGTTACGGTCTCGTGGGATTAGCCCACAAGTTAGTACGTTGAATTCGTTGATTTTGTTGGTGTCAAAATGCCAGGGGGCTAATGTAGCTTATGCAATTTTTAGAGAGGTTTTTGGTTTAGGTTGTGAAATTGAGGAAGAACATGTGAAATTGAAGGGTAGAGTTAGTCCTAATGTTCATACTTTTAACACATTAATGGACTGTTTTTATCAAGATGGGTTTGTAGGGAGGGTGAAGGAGATTTGGGATCAATTAGCAGATTCAAATTCAACTCCAAACAGCTATAGTTATAGTATTCTAATGACAGTTTTATGTGAAGAGAGAAGAACGGGAGAAGCAGAGGAGTTGTGGGAAGAAATGAAAATGAAGAAGTTGGAGCCTGATGTTGTAGCTTACAATACGATAATTGGAGGATTTTGTAAAGCAGGACATACTCATAGAGCTGAAGAGTTCTATAGAGAAATGGAACTCAGTGGAATAGAGAGTACTTTCTCCACCCTTGAACATCTCATCAATGGCTATTGTGATACTGGAGATGTTGATTCTGCATTACTTGTGTATAAGGATATGCGTAGGAAACAGTTTAGTCTCAACGCATCGATGCTTGAAGGACTTATTAGAATGTTGTGTGCTGAGAGAAGGCTTTTAGAAGCTTTAGATGTTTTTGGTTTTGCCATTGAATACTCTAGCTTTTGTCCTACAATGGAAACTTTTGAAATTCTGATAAATGAGTTGTGTCAAGAAGGGAAAATTGAAGGTGCATTTAAGCTTCAAGCGCAGATGGTAGGGAAAGGTTTTAAGCCAAATTTGAAGATTTATCAATCATTTATCGATGCTTACACAAAAGAAGGAAATGCAGAAATGGTTGAGGAATTGTGGAAGGAAATGCATGAAATCCAGCTGAGTTGA

Coding sequence (CDS)

ATGTCCGGTCCGTTGCTTAAACGAACCCTCCGCCCGATCGGAAACTCCACCGTTCAACTCCAATTTTCCTCTTCCTTTTCCTCATCCTCACCCCCCACCGAGCCTTCGCCGTCGACGAAACCCTCAATCTCCACCGTCGTTTCAGTTCTCACTCACCAGCGCTCAAAATCCCGCTGGCGATTCCTCAACTCCCTCTGTCCCAATGGCTTCGATCCCGGCGAGTTTTCCGATATCCTTCTCCAAATCAAGAACAATCCTCATCTCGCCCTCCGTTTCTTCCTCTGGACTCAGAACAAATCCCTCTGCAATCACAATCTCATTTCTTACTCGACCCTCATTCACATCCTTGCTCGCGGTCGACTCAGAACTCACGCCAAGGATGTTATTCAAACTGCCATTAGGGCTGCGGAGCTCGAAGATAGCGATAATTATTCTAACTCTGAGCGGTTTTCTTCTTCGAGGCCTTTGAAGCTTTTTGAAACCCTCGTCAAGACGTATAAACGGTGTGGCTCTGCTCCATTTGTGTTTGATTTATTGATTAAAGCTCTTCTGGAATCTAAAAAGCTCGATTCATCCATTGAAATTGTTAGAATGTTACGGTCTCGTGGGATTAGCCCACAAGTTAGTACGTTGAATTCGTTGATTTTGTTGGTGTCAAAATGCCAGGGGGCTAATGTAGCTTATGCAATTTTTAGAGAGGTTTTTGGTTTAGGTTGTGAAATTGAGGAAGAACATGTGAAATTGAAGGGTAGAGTTAGTCCTAATGTTCATACTTTTAACACATTAATGGACTGTTTTTATCAAGATGGGTTTGTAGGGAGGGTGAAGGAGATTTGGGATCAATTAGCAGATTCAAATTCAACTCCAAACAGCTATAGTTATAGTATTCTAATGACAGTTTTATGTGAAGAGAGAAGAACGGGAGAAGCAGAGGAGTTGTGGGAAGAAATGAAAATGAAGAAGTTGGAGCCTGATGTTGTAGCTTACAATACGATAATTGGAGGATTTTGTAAAGCAGGACATACTCATAGAGCTGAAGAGTTCTATAGAGAAATGGAACTCAGTGGAATAGAGAGTACTTTCTCCACCCTTGAACATCTCATCAATGGCTATTGTGATACTGGAGATGTTGATTCTGCATTACTTGTGTATAAGGATATGCGTAGGAAACAGTTTAGTCTCAACGCATCGATGCTTGAAGGACTTATTAGAATGTTGTGTGCTGAGAGAAGGCTTTTAGAAGCTTTAGATGTTTTTGGTTTTGCCATTGAATACTCTAGCTTTTGTCCTACAATGGAAACTTTTGAAATTCTGATAAATGAGTTGTGTCAAGAAGGGAAAATTGAAGGTGCATTTAAGCTTCAAGCGCAGATGGTAGGGAAAGGTTTTAAGCCAAATTTGAAGATTTATCAATCATTTATCGATGCTTACACAAAAGAAGGAAATGCAGAAATGGTTGAGGAATTGTGGAAGGAAATGCATGAAATCCAGCTGAGTTGA

Protein sequence

MSGPLLKRTLRPIGNSTVQLQFSSSFSSSSPPTEPSPSTKPSISTVVSVLTHQRSKSRWRFLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGRLRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLIKALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLGCEIEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSYSILMTVLCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLEALDVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKEGNAEMVEELWKEMHEIQLS*

Homology

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BLAST of Chy11G189820 vs. ExPASy Swiss-Prot
Match: Q9XIM8 (Pentatricopeptide repeat-containing protein At2g15980 OS=Arabidopsis thaliana OX=3702 GN=At2g15980 PE=2 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 8.7e-122
Identity = 230/501 (45.91%), Postives = 331/501 (66.07%), Query Frame = 0


Query: 1   MSGPLLKRTLRPIGNSTVQ--LQFSSSFSSSSPPTEPSPSTKPSISTVVSVLTHQRSKSR 60
           MS  +L+R L P         L  S   + SSP   PSP + P IS  VS+LTH RSKSR
Sbjct: 1   MSTSILRRILDPTRKPKPDAILSISLLTTVSSP---PSPPSDPLISDAVSILTHHRSKSR 60

Query: 61  WRFLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILAR 120
           W  L SL P+GF P +FS+I L ++NNPHL+LRFFL+T+  SLC+H+  S STLIHIL+R
Sbjct: 61  WSTLRSLQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSR 120

Query: 121 GRLRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKRCGSAPFVFDL 180
            RL++HA ++I+ A+R A  ++ ++          R LK+F +L+K+Y RCGSAPFVFDL
Sbjct: 121 SRLKSHASEIIRLALRLAATDEDED----------RVLKVFRSLIKSYNRCGSAPFVFDL 180

Query: 181 LIKALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLG 240
           LIK+ L+SK++D ++ ++R LRSRGI+ Q+ST N+LI  VS+ +GA+  Y ++REVFGL 
Sbjct: 181 LIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLD 240

Query: 241 CEIEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADS-NSTPNSYSYSIL 300
               +E  K+ G++ PN  TFN++M  FY++G    V+ IW ++ +    +PN YSY++L
Sbjct: 241 DVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVL 300

Query: 301 MTVLCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGI 360
           M   C      EAE++WEEMK++ +  D+VAYNT+IGG C      +A+E +R+M L GI
Sbjct: 301 MEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGI 360

Query: 361 ESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAER---RLLE 420
           E T  T EHL+NGYC  GDVDS L+VY++M+RK F  +   +E L+  LC +R   R++E
Sbjct: 361 ECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVE 420

Query: 421 ALDVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFI 480
           A D+   A+  + F P+   +E+L+  LC++GK++ A  +QA+MVGKGFKP+ + Y++FI
Sbjct: 421 AADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFI 480

Query: 481 DAYTKEGNAEMVEELWKEMHE 496
           D Y   G+ E    L  EM E
Sbjct: 481 DGYGIVGDEETSALLAIEMAE 488

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BLAST of Chy11G189820 vs. ExPASy Swiss-Prot
Match: Q9SXD1 (Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g62670 PE=3 SV=2)

HSP 1 Score: 161.8 bits (408), Expect = 2.0e-38
Identity = 92/321 (28.66%), Postives = 166/321 (51.71%), Query Frame = 0


Query: 175 VFDLLIKALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREV 234
           +++ +I  L + K +D ++ + + + ++GI P V T +SLI  +      + A  +  ++
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317

Query: 235 FGLGCEIEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSY 294
                        ++ +++P+V TF+ L+D F ++G +   ++++D++   +  P+  +Y
Sbjct: 318 -------------IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 377

Query: 295 SILMTVLCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMEL 354
           S L+   C   R  EA++++E M  K   PDVV YNT+I GFCK        E +REM  
Sbjct: 378 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 437

Query: 355 SGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLE 414
            G+     T   LI G    GD D A  ++K+M       N      L+  LC   +L +
Sbjct: 438 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 497

Query: 415 ALDVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFI 474
           A+ VF + ++ S   PT+ T+ I+I  +C+ GK+E  + L   +  KG KP++  Y + I
Sbjct: 498 AMVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 557

Query: 475 DAYTKEGNAEMVEELWKEMHE 496
             + ++G+ E  + L+KEM E
Sbjct: 558 SGFCRKGSKEEADALFKEMKE 564

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BLAST of Chy11G189820 vs. ExPASy Swiss-Prot
Match: Q9SH26 (Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana OX=3702 GN=At1g63400 PE=2 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 3.5e-38
Identity = 91/321 (28.35%), Postives = 168/321 (52.34%), Query Frame = 0


Query: 175 VFDLLIKALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREV 234
           ++  +I +L + +  D ++ +   + ++G+ P V T +SLI  +   +  + A  +  ++
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321

Query: 235 FGLGCEIEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSY 294
                        ++ +++PNV TFN L+D F ++G +   ++++D++   +  P+ ++Y
Sbjct: 322 -------------IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 381

Query: 295 SILMTVLCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMEL 354
           S L+   C   R  EA+ ++E M  K   P+VV YNT+I GFCKA       E +REM  
Sbjct: 382 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 441

Query: 355 SGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLE 414
            G+     T   LI+G+    D D+A +V+K M       N      L+  LC   +L +
Sbjct: 442 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 501

Query: 415 ALDVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFI 474
           A+ VF + ++ S   PT+ T+ I+I  +C+ GK+E  + L   +  KG KP++ IY + I
Sbjct: 502 AMVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 561

Query: 475 DAYTKEGNAEMVEELWKEMHE 496
             + ++G  E  + L+++M E
Sbjct: 562 SGFCRKGLKEEADALFRKMRE 568

[Close]

BLAST of Chy11G189820 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.0e-37
Identity = 141/535 (26.36%), Postives = 243/535 (45.42%), Query Frame = 0


Query: 2   SGPLLKR-TLRPIGN--STVQLQFSSSFSSSSPPTEPSPSTKPS---------ISTVVSV 61
           +G L+KR TL    N      LQ      S+   T P P   P          +  + +V
Sbjct: 6   TGLLMKRGTLSSFRNFIQLFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNV 65

Query: 62  LTHQRSKSRWRFLNSL-CPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLIS 121
           +  +R++   R L    C   F       +L++IK +  L L FF W +++   + NL S
Sbjct: 66  IKLRRAEPLRRSLKPYECK--FKTDHLIWVLMKIKCDYRLVLDFFDWARSRR--DSNLES 125

Query: 122 YSTLIHILARGRLRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKR 181
              +IH+    +    A+ +I +     +L  +D++           ++ F+ LV TYK 
Sbjct: 126 LCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSF-----------VQFFDLLVYTYKD 185

Query: 182 CGSAPFVFDLLIKALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSK-CQGANVA 241
            GS P VFD+  + L++   L  +  +   + + G+   V + N  +  +SK C     A
Sbjct: 186 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATA 245

Query: 242 YAIFREVFGLG---------------CE---IEEEH-----VKLKGRVSPNVHTFNTLMD 301
             +FRE   +G               C+   I+E H     ++LKG  +P+V +++T+++
Sbjct: 246 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG-YTPDVISYSTVVN 305

Query: 302 CFYQDGFVGRVKEIWDQLADSNSTPNSYSYSILMTVLCEERRTGEAEELWEEMKMKKLEP 361
            + + G + +V ++ + +      PNSY Y  ++ +LC   +  EAEE + EM  + + P
Sbjct: 306 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 365

Query: 362 DVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIESTFSTLEHLINGYCDTGDVDSALLVY 421
           D V Y T+I GFCK G    A +F+ EM    I     T   +I+G+C  GD+  A  ++
Sbjct: 366 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 425

Query: 422 KDMRRKQFSLNASMLEGLIRMLCAERRLLEALDVFGFAIEYSSFCPTMETFEILINELCQ 481
            +M  K    ++     LI   C    + +A  V    I+ +   P + T+  LI+ LC+
Sbjct: 426 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCK 485

Query: 482 EGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKEGNAEMVEELWKEMHEIQLS 500
           EG ++ A +L  +M   G +PN+  Y S ++   K GN E   +L  E     L+
Sbjct: 486 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523

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BLAST of Chy11G189820 vs. ExPASy Swiss-Prot
Match: Q9LQ14 (Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g62930 PE=2 SV=2)

HSP 1 Score: 157.1 bits (396), Expect = 5.0e-37
Identity = 108/396 (27.27%), Postives = 189/396 (47.73%), Query Frame = 0


Query: 105 NLISYSTLIHILARGRLRTHAKDVIQTAIRAAELEDSDNYSN-----SERFSSSRPLKLF 164
           N ++++TLIH L      + A  +I   +      D   Y        +R      L L 
Sbjct: 184 NTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLL 243

Query: 165 ETLVKTYKRCGSAPFVFDLLIKALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVS 224
           + + K   +  +   ++  +I AL   K ++ ++ +   + ++GI P V T NSLI  + 
Sbjct: 244 KKMEK--GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLC 303

Query: 225 KCQGANVAYAIFREVFGLGCEIEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIW 284
                + A  +  ++             ++ +++PNV TF+ L+D F ++G +   ++++
Sbjct: 304 NYGRWSDASRLLSDM-------------IERKINPNVVTFSALIDAFVKEGKLVEAEKLY 363

Query: 285 DQLADSNSTPNSYSYSILMTVLCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKA 344
           D++   +  P+ ++YS L+   C   R  EA+ ++E M  K   P+VV YNT+I GFCKA
Sbjct: 364 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 423

Query: 345 GHTHRAEEFYREMELSGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASML 404
                  E +REM   G+     T   LI G    GD D A  ++K M       +    
Sbjct: 424 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 483

Query: 405 EGLIRMLCAERRLLEALDVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMV 464
             L+  LC   +L +AL VF + ++ S   P + T+ I+I  +C+ GK+E  + L   + 
Sbjct: 484 SILLDGLCKYGKLEKALVVFEY-LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLS 543

Query: 465 GKGFKPNLKIYQSFIDAYTKEGNAEMVEELWKEMHE 496
            KG KPN+ IY + I  + ++G  E  + L++EM E
Sbjct: 544 LKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563

[Close]

BLAST of Chy11G189820 vs. ExPASy TrEMBL
Match: A0A0A0LIN1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G239400 PE=4 SV=1)

HSP 1 Score: 971.5 bits (2510), Expect = 1.4e-279
Identity = 485/499 (97.19%), Postives = 493/499 (98.80%), Query Frame = 0


Query: 1   MSGPLLKRTLRPIGNSTVQLQFSSSFSSSSPPTEPSPSTKPSISTVVSVLTHQRSKSRWR 60
           MSGPLLKRTLRPIGNSTV LQFSSSFSSSSPPT+PSPSTKPSISTVVSVLTHQRSKSRWR
Sbjct: 1   MSGPLLKRTLRPIGNSTVHLQFSSSFSSSSPPTDPSPSTKPSISTVVSVLTHQRSKSRWR 60

Query: 61  FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120
           FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR
Sbjct: 61  FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120

Query: 121 LRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180
           LRTHAKDVIQTAIRAA+LEDSDNYS +ERFS SRPLKLFETLVKTYKRCGSAPFVFDLLI
Sbjct: 121 LRTHAKDVIQTAIRAAQLEDSDNYSKTERFSPSRPLKLFETLVKTYKRCGSAPFVFDLLI 180

Query: 181 KALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLGCE 240
           KALL+SKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGL CE
Sbjct: 181 KALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLDCE 240

Query: 241 IEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSYSILMTV 300
           IEEEHVKLKGRVSPNVHTFNTLMDCFY+DGF GRVKEIWDQLADSNSTPNSYSYSILMTV
Sbjct: 241 IEEEHVKLKGRVSPNVHTFNTLMDCFYRDGFAGRVKEIWDQLADSNSTPNSYSYSILMTV 300

Query: 301 LCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST 360
           LCEE+RTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST
Sbjct: 301 LCEEKRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST 360

Query: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLEALDVFG 420
           FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNAS LEGLIRMLCAERRLLEALDVFG
Sbjct: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASTLEGLIRMLCAERRLLEALDVFG 420

Query: 421 FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKE 480
           FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVG+GFKPNLKIYQSFIDAYTKE
Sbjct: 421 FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGRGFKPNLKIYQSFIDAYTKE 480

Query: 481 GNAEMVEELWKEMHEIQLS 500
           GNAEMVE+LWKEMHEIQLS
Sbjct: 481 GNAEMVEKLWKEMHEIQLS 499

[Close]

BLAST of Chy11G189820 vs. ExPASy TrEMBL
Match: A0A5A7TQU6 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004860 PE=4 SV=1)

HSP 1 Score: 935.6 bits (2417), Expect = 8.3e-269
Identity = 472/499 (94.59%), Postives = 482/499 (96.59%), Query Frame = 0


Query: 1   MSGPLLKRTLRPIGNSTVQLQFSSSFSSSSPPTEPSPSTKPSISTVVSVLTHQRSKSRWR 60
           MSGPLLKRTLRPIGNSTV LQFSSSF SSSPP EPSPSTKPSISTVVSVLTHQRSKSRWR
Sbjct: 1   MSGPLLKRTLRPIGNSTVNLQFSSSFFSSSPPAEPSPSTKPSISTVVSVLTHQRSKSRWR 60

Query: 61  FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120
           FLNSLCPNGFDPGEFSDI+LQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR
Sbjct: 61  FLNSLCPNGFDPGEFSDIVLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120

Query: 121 LRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180
           LRTHAKDVIQTAIRAAELEDSDNYS SERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI
Sbjct: 121 LRTHAKDVIQTAIRAAELEDSDNYSESERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180

Query: 181 KALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLGCE 240
           KALL+SKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIF EVFGL CE
Sbjct: 181 KALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFTEVFGLDCE 240

Query: 241 IEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSYSILMTV 300
           IE+EHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNS PNSYSYSILM V
Sbjct: 241 IEKEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSIPNSYSYSILMAV 300

Query: 301 LCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST 360
           LCEE+R GEAEELWEEMKMKKLE DVVAYNTIIGGFCKAG+T RAEEFYREMELSGIEST
Sbjct: 301 LCEEKRMGEAEELWEEMKMKKLELDVVAYNTIIGGFCKAGNTQRAEEFYREMELSGIEST 360

Query: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLEALDVFG 420
           FSTLEHLINGYCDTGDVDSALLVYKDMRRK+FSLNAS LEGLI +LCAERRLLEALDVFG
Sbjct: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKRFSLNASTLEGLIEVLCAERRLLEALDVFG 420

Query: 421 FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKE 480
           FA+E SSFCPTMETFE+LIN LCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAY KE
Sbjct: 421 FAVEDSSFCPTMETFEVLINWLCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYMKE 480

Query: 481 GNAEMVEELWKEMHEIQLS 500
           GNAEMVE+L KEMHEIQLS
Sbjct: 481 GNAEMVEKLGKEMHEIQLS 499

[Close]

BLAST of Chy11G189820 vs. ExPASy TrEMBL
Match: A0A5D3CQ25 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G001590 PE=4 SV=1)

HSP 1 Score: 933.7 bits (2412), Expect = 3.2e-268
Identity = 471/499 (94.39%), Postives = 481/499 (96.39%), Query Frame = 0


Query: 1   MSGPLLKRTLRPIGNSTVQLQFSSSFSSSSPPTEPSPSTKPSISTVVSVLTHQRSKSRWR 60
           MSGPLLKRTLRPIGNSTV LQFSSSF SSSPP EPSPSTKPSISTVVSVLTHQRSKSRWR
Sbjct: 1   MSGPLLKRTLRPIGNSTVNLQFSSSFFSSSPPAEPSPSTKPSISTVVSVLTHQRSKSRWR 60

Query: 61  FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120
           FLNSLCPNGFDPGEFSDI+LQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR
Sbjct: 61  FLNSLCPNGFDPGEFSDIVLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120

Query: 121 LRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180
           LRTHAKDVIQTAIRAAELEDSDNYS SERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI
Sbjct: 121 LRTHAKDVIQTAIRAAELEDSDNYSESERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180

Query: 181 KALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLGCE 240
           KALL+SKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIF EVFGL CE
Sbjct: 181 KALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFTEVFGLDCE 240

Query: 241 IEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSYSILMTV 300
           IE+EHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNS PNSYSYSILM V
Sbjct: 241 IEKEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSIPNSYSYSILMAV 300

Query: 301 LCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST 360
           LCEE+R GEAEELWEEMKMKKLE DVVAYNTIIGGFCKAG+  RAEEFYREMELSGIEST
Sbjct: 301 LCEEKRMGEAEELWEEMKMKKLELDVVAYNTIIGGFCKAGNAQRAEEFYREMELSGIEST 360

Query: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLEALDVFG 420
           FSTLEHLINGYCDTGDVDSALLVYKDMRRK+FSLNAS LEGLI +LCAERRLLEALDVFG
Sbjct: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKRFSLNASTLEGLIEVLCAERRLLEALDVFG 420

Query: 421 FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKE 480
           FA+E SSFCPTMETFE+LIN LCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAY KE
Sbjct: 421 FAVEDSSFCPTMETFEVLINWLCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYMKE 480

Query: 481 GNAEMVEELWKEMHEIQLS 500
           GNAEMVE+L KEMHEIQLS
Sbjct: 481 GNAEMVEKLGKEMHEIQLS 499

[Close]

BLAST of Chy11G189820 vs. ExPASy TrEMBL
Match: A0A1S3CAB5 (pentatricopeptide repeat-containing protein At2g15980 OS=Cucumis melo OX=3656 GN=LOC103498439 PE=4 SV=1)

HSP 1 Score: 933.7 bits (2412), Expect = 3.2e-268
Identity = 471/499 (94.39%), Postives = 481/499 (96.39%), Query Frame = 0


Query: 1   MSGPLLKRTLRPIGNSTVQLQFSSSFSSSSPPTEPSPSTKPSISTVVSVLTHQRSKSRWR 60
           MSGPLLKRTLRPIGNSTV LQFSSSF SSSPP EPSPSTKPSISTVVSVLTHQRSKSRWR
Sbjct: 1   MSGPLLKRTLRPIGNSTVNLQFSSSFFSSSPPAEPSPSTKPSISTVVSVLTHQRSKSRWR 60

Query: 61  FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120
           FLNSLCPNGFDPGEFSDI+LQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR
Sbjct: 61  FLNSLCPNGFDPGEFSDIVLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120

Query: 121 LRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180
           LRTHAKDVIQTAIRAAELEDSDNYS SERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI
Sbjct: 121 LRTHAKDVIQTAIRAAELEDSDNYSESERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180

Query: 181 KALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLGCE 240
           KALL+SKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIF EVFGL CE
Sbjct: 181 KALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFTEVFGLDCE 240

Query: 241 IEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSYSILMTV 300
           IE+EHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNS PNSYSYSILM V
Sbjct: 241 IEKEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSIPNSYSYSILMAV 300

Query: 301 LCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST 360
           LCEE+R GEAEELWEEMKMKKLE DVVAYNTIIGGFCKAG+  RAEEFYREMELSGIEST
Sbjct: 301 LCEEKRMGEAEELWEEMKMKKLELDVVAYNTIIGGFCKAGNAQRAEEFYREMELSGIEST 360

Query: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLEALDVFG 420
           FSTLEHLINGYCDTGDVDSALLVYKDMRRK+FSLNAS LEGLI +LCAERRLLEALDVFG
Sbjct: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKRFSLNASTLEGLIEVLCAERRLLEALDVFG 420

Query: 421 FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKE 480
           FA+E SSFCPTMETFE+LIN LCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAY KE
Sbjct: 421 FAVEDSSFCPTMETFEVLINWLCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYMKE 480

Query: 481 GNAEMVEELWKEMHEIQLS 500
           GNAEMVE+L KEMHEIQLS
Sbjct: 481 GNAEMVEKLGKEMHEIQLS 499

[Close]

BLAST of Chy11G189820 vs. ExPASy TrEMBL
Match: A0A6J1JGQ1 (pentatricopeptide repeat-containing protein At2g15980 OS=Cucurbita maxima OX=3661 GN=LOC111484227 PE=4 SV=1)

HSP 1 Score: 808.1 bits (2086), Expect = 2.0e-230
Identity = 405/499 (81.16%), Postives = 441/499 (88.38%), Query Frame = 0


Query: 1   MSGPLLKRTLRPIGNSTVQLQFSSSFSSSSPPTEPSPSTKPSISTVVSVLTHQRSKSRWR 60
           MS PLLKR+L  I NST  L FS SF SSSP   P PSTKPSISTVVSVLTH RSKSRWR
Sbjct: 1   MSIPLLKRSLWLIPNSTFNLPFSPSFFSSSPAAVPLPSTKPSISTVVSVLTHHRSKSRWR 60

Query: 61  FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120
           FLNSLCP+GFDPGEFSDI+LQIKNN HL LRFFLWT++KSLCNH+L+SYST+IHILARGR
Sbjct: 61  FLNSLCPDGFDPGEFSDIVLQIKNNSHLVLRFFLWTRSKSLCNHDLVSYSTVIHILARGR 120

Query: 121 LRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180
           LRTHAKDVIQ AIRA  LED D+ S  ERFSSSRPLKLFETLVKTYK+CGSAPFVFDLLI
Sbjct: 121 LRTHAKDVIQNAIRATALEDDDDCSQCERFSSSRPLKLFETLVKTYKQCGSAPFVFDLLI 180

Query: 181 KALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLGCE 240
           KALL+SKKLD +I+IVRMLRSRGISPQ+ TLNSLIL +SKC+GAN  YA+FREVFGL CE
Sbjct: 181 KALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILCMSKCEGANAGYALFREVFGLNCE 240

Query: 241 IEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSYSILMTV 300
           IEEE+VK+K R SPNVHTFNTLM CFYQDG VGRVKEIWDQLADSNS PNSYSYSILM V
Sbjct: 241 IEEENVKVKARASPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSNSIPNSYSYSILMAV 300

Query: 301 LCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST 360
           LCEE+R GEAEELWEEMKMKKLE D VAYNTIIGGFCKAG+  RAEEF+REMEL G EST
Sbjct: 301 LCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELCGTEST 360

Query: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLEALDVFG 420
           FST EHLINGYC+TGDVDSALLVYKDMRRK FSLN  MLE + R LC E RLLEALDVFG
Sbjct: 361 FSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCVETRLLEALDVFG 420

Query: 421 FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKE 480
           FA E+++FCPTMET+E+LIN LCQ+GK+E AFKLQAQMVGKGFKPN KIYQSFIDAY+KE
Sbjct: 421 FATEHTNFCPTMETYELLINGLCQKGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAYSKE 480

Query: 481 GNAEMVEELWKEMHEIQLS 500
           GN EMV++L +E+ EIQLS
Sbjct: 481 GNEEMVKKLGEEILEIQLS 499

[Close]

BLAST of Chy11G189820 vs. NCBI nr
Match: XP_004145397.1 (pentatricopeptide repeat-containing protein At2g15980 [Cucumis sativus] >XP_011649228.1 pentatricopeptide repeat-containing protein At2g15980 [Cucumis sativus] >KGN61775.1 hypothetical protein Csa_006368 [Cucumis sativus])

HSP 1 Score: 961 bits (2483), Expect = 0.0
Identity = 485/499 (97.19%), Postives = 493/499 (98.80%), Query Frame = 0


Query: 1   MSGPLLKRTLRPIGNSTVQLQFSSSFSSSSPPTEPSPSTKPSISTVVSVLTHQRSKSRWR 60
           MSGPLLKRTLRPIGNSTV LQFSSSFSSSSPPT+PSPSTKPSISTVVSVLTHQRSKSRWR
Sbjct: 1   MSGPLLKRTLRPIGNSTVHLQFSSSFSSSSPPTDPSPSTKPSISTVVSVLTHQRSKSRWR 60

Query: 61  FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120
           FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR
Sbjct: 61  FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120

Query: 121 LRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180
           LRTHAKDVIQTAIRAA+LEDSDNYS +ERFS SRPLKLFETLVKTYKRCGSAPFVFDLLI
Sbjct: 121 LRTHAKDVIQTAIRAAQLEDSDNYSKTERFSPSRPLKLFETLVKTYKRCGSAPFVFDLLI 180

Query: 181 KALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLGCE 240
           KALL+SKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGL CE
Sbjct: 181 KALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLDCE 240

Query: 241 IEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSYSILMTV 300
           IEEEHVKLKGRVSPNVHTFNTLMDCFY+DGF GRVKEIWDQLADSNSTPNSYSYSILMTV
Sbjct: 241 IEEEHVKLKGRVSPNVHTFNTLMDCFYRDGFAGRVKEIWDQLADSNSTPNSYSYSILMTV 300

Query: 301 LCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST 360
           LCEE+RTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST
Sbjct: 301 LCEEKRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST 360

Query: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLEALDVFG 420
           FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNAS LEGLIRMLCAERRLLEALDVFG
Sbjct: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASTLEGLIRMLCAERRLLEALDVFG 420

Query: 421 FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKE 480
           FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVG+GFKPNLKIYQSFIDAYTKE
Sbjct: 421 FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGRGFKPNLKIYQSFIDAYTKE 480

Query: 481 GNAEMVEELWKEMHEIQLS 499
           GNAEMVE+LWKEMHEIQLS
Sbjct: 481 GNAEMVEKLWKEMHEIQLS 499

[Close]

BLAST of Chy11G189820 vs. NCBI nr
Match: KAA0045943.1 (pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 925 bits (2390), Expect = 0.0
Identity = 472/499 (94.59%), Postives = 482/499 (96.59%), Query Frame = 0


Query: 1   MSGPLLKRTLRPIGNSTVQLQFSSSFSSSSPPTEPSPSTKPSISTVVSVLTHQRSKSRWR 60
           MSGPLLKRTLRPIGNSTV LQFSSSF SSSPP EPSPSTKPSISTVVSVLTHQRSKSRWR
Sbjct: 1   MSGPLLKRTLRPIGNSTVNLQFSSSFFSSSPPAEPSPSTKPSISTVVSVLTHQRSKSRWR 60

Query: 61  FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120
           FLNSLCPNGFDPGEFSDI+LQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR
Sbjct: 61  FLNSLCPNGFDPGEFSDIVLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120

Query: 121 LRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180
           LRTHAKDVIQTAIRAAELEDSDNYS SERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI
Sbjct: 121 LRTHAKDVIQTAIRAAELEDSDNYSESERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180

Query: 181 KALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLGCE 240
           KALL+SKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIF EVFGL CE
Sbjct: 181 KALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFTEVFGLDCE 240

Query: 241 IEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSYSILMTV 300
           IE+EHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNS PNSYSYSILM V
Sbjct: 241 IEKEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSIPNSYSYSILMAV 300

Query: 301 LCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST 360
           LCEE+R GEAEELWEEMKMKKLE DVVAYNTIIGGFCKAG+T RAEEFYREMELSGIEST
Sbjct: 301 LCEEKRMGEAEELWEEMKMKKLELDVVAYNTIIGGFCKAGNTQRAEEFYREMELSGIEST 360

Query: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLEALDVFG 420
           FSTLEHLINGYCDTGDVDSALLVYKDMRRK+FSLNAS LEGLI +LCAERRLLEALDVFG
Sbjct: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKRFSLNASTLEGLIEVLCAERRLLEALDVFG 420

Query: 421 FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKE 480
           FA+E SSFCPTMETFE+LIN LCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAY KE
Sbjct: 421 FAVEDSSFCPTMETFEVLINWLCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYMKE 480

Query: 481 GNAEMVEELWKEMHEIQLS 499
           GNAEMVE+L KEMHEIQLS
Sbjct: 481 GNAEMVEKLGKEMHEIQLS 499

[Close]

BLAST of Chy11G189820 vs. NCBI nr
Match: XP_008459266.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g15980 [Cucumis melo] >TYK13645.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 923 bits (2385), Expect = 0.0
Identity = 471/499 (94.39%), Postives = 481/499 (96.39%), Query Frame = 0


Query: 1   MSGPLLKRTLRPIGNSTVQLQFSSSFSSSSPPTEPSPSTKPSISTVVSVLTHQRSKSRWR 60
           MSGPLLKRTLRPIGNSTV LQFSSSF SSSPP EPSPSTKPSISTVVSVLTHQRSKSRWR
Sbjct: 1   MSGPLLKRTLRPIGNSTVNLQFSSSFFSSSPPAEPSPSTKPSISTVVSVLTHQRSKSRWR 60

Query: 61  FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120
           FLNSLCPNGFDPGEFSDI+LQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR
Sbjct: 61  FLNSLCPNGFDPGEFSDIVLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120

Query: 121 LRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180
           LRTHAKDVIQTAIRAAELEDSDNYS SERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI
Sbjct: 121 LRTHAKDVIQTAIRAAELEDSDNYSESERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180

Query: 181 KALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLGCE 240
           KALL+SKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIF EVFGL CE
Sbjct: 181 KALLDSKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFTEVFGLDCE 240

Query: 241 IEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSYSILMTV 300
           IE+EHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNS PNSYSYSILM V
Sbjct: 241 IEKEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSIPNSYSYSILMAV 300

Query: 301 LCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST 360
           LCEE+R GEAEELWEEMKMKKLE DVVAYNTIIGGFCKAG+  RAEEFYREMELSGIEST
Sbjct: 301 LCEEKRMGEAEELWEEMKMKKLELDVVAYNTIIGGFCKAGNAQRAEEFYREMELSGIEST 360

Query: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLEALDVFG 420
           FSTLEHLINGYCDTGDVDSALLVYKDMRRK+FSLNAS LEGLI +LCAERRLLEALDVFG
Sbjct: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKRFSLNASTLEGLIEVLCAERRLLEALDVFG 420

Query: 421 FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKE 480
           FA+E SSFCPTMETFE+LIN LCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAY KE
Sbjct: 421 FAVEDSSFCPTMETFEVLINWLCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYMKE 480

Query: 481 GNAEMVEELWKEMHEIQLS 499
           GNAEMVE+L KEMHEIQLS
Sbjct: 481 GNAEMVEKLGKEMHEIQLS 499

[Close]

BLAST of Chy11G189820 vs. NCBI nr
Match: XP_038901621.1 (pentatricopeptide repeat-containing protein At2g15980 [Benincasa hispida])

HSP 1 Score: 831 bits (2147), Expect = 1.12e-300
Identity = 428/499 (85.77%), Postives = 454/499 (90.98%), Query Frame = 0


Query: 1   MSGPLLKRTLRPIGNSTVQLQFSSSFSSSSPPTEPSPSTKPSISTVVSVLTHQRSKSRWR 60
           MS PLL+RTL PI NST  L FS SF SSSPP EPSPSTKPSISTVVSVLTH RSKSRWR
Sbjct: 27  MSVPLLRRTLWPIRNSTFNLPFSHSFFSSSPPGEPSPSTKPSISTVVSVLTHHRSKSRWR 86

Query: 61  FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120
           FLNSLCP+GFDPGEFSDILLQIKNNPHLALRFF WTQNKSLCNHNL+SYST+IHILARGR
Sbjct: 87  FLNSLCPDGFDPGEFSDILLQIKNNPHLALRFFHWTQNKSLCNHNLVSYSTVIHILARGR 146

Query: 121 LRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180
           LRTHAKDVIQTAIRAAELED D+ S  ERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI
Sbjct: 147 LRTHAKDVIQTAIRAAELEDGDDCSKCERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 206

Query: 181 KALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLGCE 240
           KALL+SKKL+S+I+IVRMLRSRGISPQV TLNSLILLVSK QGAN  YAIF+EVFGL CE
Sbjct: 207 KALLDSKKLESAIQIVRMLRSRGISPQVGTLNSLILLVSKFQGANAGYAIFKEVFGLDCE 266

Query: 241 IEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSYSILMTV 300
           IEEE+VKLK  VSPNVHTFNTLM+CFYQDG VGRVK+IWDQLADSNS PNSYSYSILM V
Sbjct: 267 IEEENVKLKAGVSPNVHTFNTLMECFYQDGLVGRVKDIWDQLADSNSIPNSYSYSILMAV 326

Query: 301 LCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST 360
            CEE+R GEAEELW EMK+KKLE D VAYNTIIGGFCKAG+ HRAEEFYREMELSGIEST
Sbjct: 327 FCEEKRMGEAEELWVEMKIKKLELDAVAYNTIIGGFCKAGNVHRAEEFYREMELSGIEST 386

Query: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLEALDVFG 420
           FST EHLINGYC+TGDVDSALLVYKDMRRK+F+ NA +LE LIR LCAE RLLEALDVF 
Sbjct: 387 FSTFEHLINGYCETGDVDSALLVYKDMRRKRFTPNALILEELIRGLCAETRLLEALDVFC 446

Query: 421 FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKE 480
           FAIE S+FCPT+ET+E+LIN LCQEGKIE AFKLQAQMVGKGFKPNLKIYQSFIDAY KE
Sbjct: 447 FAIEDSNFCPTLETYELLINGLCQEGKIEVAFKLQAQMVGKGFKPNLKIYQSFIDAYIKE 506

Query: 481 GNAEMVEELWKEMHEIQLS 499
           GN EMVE+L KE+ EIQLS
Sbjct: 507 GNEEMVEKLGKEILEIQLS 525

[Close]

BLAST of Chy11G189820 vs. NCBI nr
Match: XP_023512842.1 (pentatricopeptide repeat-containing protein At2g15980 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 803 bits (2075), Expect = 3.88e-290
Identity = 409/499 (81.96%), Postives = 445/499 (89.18%), Query Frame = 0


Query: 1   MSGPLLKRTLRPIGNSTVQLQFSSSFSSSSPPTEPSPSTKPSISTVVSVLTHQRSKSRWR 60
           MS PLLKR+L  I NST  L FS SF SSSP   PSPSTKPSISTVVSVLTH RSKSRWR
Sbjct: 1   MSIPLLKRSLWLIPNSTFNLPFSPSFFSSSPAAVPSPSTKPSISTVVSVLTHHRSKSRWR 60

Query: 61  FLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILARGR 120
           FLNSLCP+GFDPGEFSDI+LQIKNN HL L FFLWT++KSLCNH+L+SYST+IHILARGR
Sbjct: 61  FLNSLCPDGFDPGEFSDIVLQIKNNSHLVLCFFLWTRSKSLCNHDLVSYSTVIHILARGR 120

Query: 121 LRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKRCGSAPFVFDLLI 180
           LRTHAKDVIQTAIRA  LED D+ SN ERFSSSRPLKLFETLVKTYK+CGSAPFVFDLLI
Sbjct: 121 LRTHAKDVIQTAIRATALEDGDDCSNCERFSSSRPLKLFETLVKTYKQCGSAPFVFDLLI 180

Query: 181 KALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLGCE 240
           KALL+SKKLD +I+IVRMLRSRGISPQ+ TLNSLIL +SKC+GAN  YA+FREVFGL CE
Sbjct: 181 KALLDSKKLDPAIQIVRMLRSRGISPQIGTLNSLILWMSKCEGANAGYALFREVFGLNCE 240

Query: 241 IEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSYSILMTV 300
           IEE++VK+K RVSPNVHTFNTLM CFYQDG VGRVKEIWDQLADS S PNSYSYSILM V
Sbjct: 241 IEEQNVKVKARVSPNVHTFNTLMVCFYQDGLVGRVKEIWDQLADSTSIPNSYSYSILMAV 300

Query: 301 LCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIEST 360
           LCEE+R GEAEELWEEMKMKKLE D VAYNTIIGGFCKAG+  RAEEF+REMEL G EST
Sbjct: 301 LCEEKRMGEAEELWEEMKMKKLEIDAVAYNTIIGGFCKAGNVRRAEEFFREMELCGTEST 360

Query: 361 FSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLEALDVFG 420
           FST EHLINGYC+TGDVDSALLVYKDMRRK FSLN  MLE + R LCAE RLLEALDVFG
Sbjct: 361 FSTFEHLINGYCETGDVDSALLVYKDMRRKSFSLNPLMLEAITRGLCAETRLLEALDVFG 420

Query: 421 FAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKE 480
           FAIE+++FCPTMET+E+LIN LCQEGK+E AFKLQAQMVGKGFKPN KIYQSFIDAY+KE
Sbjct: 421 FAIEHTNFCPTMETYELLINGLCQEGKLEAAFKLQAQMVGKGFKPNSKIYQSFIDAYSKE 480

Query: 481 GNAEMVEELWKEMHEIQLS 499
           GN EMV++L +E+ EIQLS
Sbjct: 481 GNEEMVKKLGEEILEIQLS 499

[Close]

BLAST of Chy11G189820 vs. TAIR 10
Match: AT2G15980.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 438.7 bits (1127), Expect = 6.2e-123
Identity = 230/501 (45.91%), Postives = 331/501 (66.07%), Query Frame = 0


Query: 1   MSGPLLKRTLRPIGNSTVQ--LQFSSSFSSSSPPTEPSPSTKPSISTVVSVLTHQRSKSR 60
           MS  +L+R L P         L  S   + SSP   PSP + P IS  VS+LTH RSKSR
Sbjct: 1   MSTSILRRILDPTRKPKPDAILSISLLTTVSSP---PSPPSDPLISDAVSILTHHRSKSR 60

Query: 61  WRFLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLISYSTLIHILAR 120
           W  L SL P+GF P +FS+I L ++NNPHL+LRFFL+T+  SLC+H+  S STLIHIL+R
Sbjct: 61  WSTLRSLQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSLCSHDTHSCSTLIHILSR 120

Query: 121 GRLRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKRCGSAPFVFDL 180
            RL++HA ++I+ A+R A  ++ ++          R LK+F +L+K+Y RCGSAPFVFDL
Sbjct: 121 SRLKSHASEIIRLALRLAATDEDED----------RVLKVFRSLIKSYNRCGSAPFVFDL 180

Query: 181 LIKALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREVFGLG 240
           LIK+ L+SK++D ++ ++R LRSRGI+ Q+ST N+LI  VS+ +GA+  Y ++REVFGL 
Sbjct: 181 LIKSCLDSKEIDGAVMVMRKLRSRGINAQISTCNALITEVSRRRGASNGYKMYREVFGLD 240

Query: 241 CEIEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADS-NSTPNSYSYSIL 300
               +E  K+ G++ PN  TFN++M  FY++G    V+ IW ++ +    +PN YSY++L
Sbjct: 241 DVSVDEAKKMIGKIKPNATTFNSMMVSFYREGETEMVERIWREMEEEVGCSPNVYSYNVL 300

Query: 301 MTVLCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMELSGI 360
           M   C      EAE++WEEMK++ +  D+VAYNT+IGG C      +A+E +R+M L GI
Sbjct: 301 MEAYCARGLMSEAEKVWEEMKVRGVVYDIVAYNTMIGGLCSNFEVVKAKELFRDMGLKGI 360

Query: 361 ESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAER---RLLE 420
           E T  T EHL+NGYC  GDVDS L+VY++M+RK F  +   +E L+  LC +R   R++E
Sbjct: 361 ECTCLTYEHLVNGYCKAGDVDSGLVVYREMKRKGFEADGLTIEALVEGLCDDRDGQRVVE 420

Query: 421 ALDVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFI 480
           A D+   A+  + F P+   +E+L+  LC++GK++ A  +QA+MVGKGFKP+ + Y++FI
Sbjct: 421 AADIVKDAVREAMFYPSRNCYELLVKRLCEDGKMDRALNIQAEMVGKGFKPSQETYRAFI 480

Query: 481 DAYTKEGNAEMVEELWKEMHE 496
           D Y   G+ E    L  EM E
Sbjct: 481 DGYGIVGDEETSALLAIEMAE 488

[Close]

BLAST of Chy11G189820 vs. TAIR 10
Match: AT1G62670.1 (rna processing factor 2 )

HSP 1 Score: 161.8 bits (408), Expect = 1.5e-39
Identity = 92/321 (28.66%), Postives = 166/321 (51.71%), Query Frame = 0


Query: 175 VFDLLIKALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREV 234
           +++ +I  L + K +D ++ + + + ++GI P V T +SLI  +      + A  +  ++
Sbjct: 258 IYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDM 317

Query: 235 FGLGCEIEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSY 294
                        ++ +++P+V TF+ L+D F ++G +   ++++D++   +  P+  +Y
Sbjct: 318 -------------IERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTY 377

Query: 295 SILMTVLCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMEL 354
           S L+   C   R  EA++++E M  K   PDVV YNT+I GFCK        E +REM  
Sbjct: 378 SSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 437

Query: 355 SGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLE 414
            G+     T   LI G    GD D A  ++K+M       N      L+  LC   +L +
Sbjct: 438 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 497

Query: 415 ALDVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFI 474
           A+ VF + ++ S   PT+ T+ I+I  +C+ GK+E  + L   +  KG KP++  Y + I
Sbjct: 498 AMVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMI 557

Query: 475 DAYTKEGNAEMVEELWKEMHE 496
             + ++G+ E  + L+KEM E
Sbjct: 558 SGFCRKGSKEEADALFKEMKE 564

[Close]

BLAST of Chy11G189820 vs. TAIR 10
Match: AT1G63400.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 161.0 bits (406), Expect = 2.5e-39
Identity = 91/321 (28.35%), Postives = 168/321 (52.34%), Query Frame = 0


Query: 175 VFDLLIKALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSKCQGANVAYAIFREV 234
           ++  +I +L + +  D ++ +   + ++G+ P V T +SLI  +   +  + A  +  ++
Sbjct: 262 IYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDM 321

Query: 235 FGLGCEIEEEHVKLKGRVSPNVHTFNTLMDCFYQDGFVGRVKEIWDQLADSNSTPNSYSY 294
                        ++ +++PNV TFN L+D F ++G +   ++++D++   +  P+ ++Y
Sbjct: 322 -------------IERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 381

Query: 295 SILMTVLCEERRTGEAEELWEEMKMKKLEPDVVAYNTIIGGFCKAGHTHRAEEFYREMEL 354
           S L+   C   R  EA+ ++E M  K   P+VV YNT+I GFCKA       E +REM  
Sbjct: 382 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQ 441

Query: 355 SGIESTFSTLEHLINGYCDTGDVDSALLVYKDMRRKQFSLNASMLEGLIRMLCAERRLLE 414
            G+     T   LI+G+    D D+A +V+K M       N      L+  LC   +L +
Sbjct: 442 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEK 501

Query: 415 ALDVFGFAIEYSSFCPTMETFEILINELCQEGKIEGAFKLQAQMVGKGFKPNLKIYQSFI 474
           A+ VF + ++ S   PT+ T+ I+I  +C+ GK+E  + L   +  KG KP++ IY + I
Sbjct: 502 AMVVFEY-LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMI 561

Query: 475 DAYTKEGNAEMVEELWKEMHE 496
             + ++G  E  + L+++M E
Sbjct: 562 SGFCRKGLKEEADALFRKMRE 568

[Close]

BLAST of Chy11G189820 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 7.2e-39
Identity = 141/535 (26.36%), Postives = 243/535 (45.42%), Query Frame = 0


Query: 2   SGPLLKR-TLRPIGN--STVQLQFSSSFSSSSPPTEPSPSTKPS---------ISTVVSV 61
           +G L+KR TL    N      LQ      S+   T P P   P          +  + +V
Sbjct: 6   TGLLMKRGTLSSFRNFIQLFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNV 65

Query: 62  LTHQRSKSRWRFLNSL-CPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLIS 121
           +  +R++   R L    C   F       +L++IK +  L L FF W +++   + NL S
Sbjct: 66  IKLRRAEPLRRSLKPYECK--FKTDHLIWVLMKIKCDYRLVLDFFDWARSRR--DSNLES 125

Query: 122 YSTLIHILARGRLRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKR 181
              +IH+    +    A+ +I +     +L  +D++           ++ F+ LV TYK 
Sbjct: 126 LCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSF-----------VQFFDLLVYTYKD 185

Query: 182 CGSAPFVFDLLIKALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSK-CQGANVA 241
            GS P VFD+  + L++   L  +  +   + + G+   V + N  +  +SK C     A
Sbjct: 186 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATA 245

Query: 242 YAIFREVFGLG---------------CE---IEEEH-----VKLKGRVSPNVHTFNTLMD 301
             +FRE   +G               C+   I+E H     ++LKG  +P+V +++T+++
Sbjct: 246 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG-YTPDVISYSTVVN 305

Query: 302 CFYQDGFVGRVKEIWDQLADSNSTPNSYSYSILMTVLCEERRTGEAEELWEEMKMKKLEP 361
            + + G + +V ++ + +      PNSY Y  ++ +LC   +  EAEE + EM  + + P
Sbjct: 306 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 365

Query: 362 DVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIESTFSTLEHLINGYCDTGDVDSALLVY 421
           D V Y T+I GFCK G    A +F+ EM    I     T   +I+G+C  GD+  A  ++
Sbjct: 366 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 425

Query: 422 KDMRRKQFSLNASMLEGLIRMLCAERRLLEALDVFGFAIEYSSFCPTMETFEILINELCQ 481
            +M  K    ++     LI   C    + +A  V    I+ +   P + T+  LI+ LC+
Sbjct: 426 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCK 485

Query: 482 EGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKEGNAEMVEELWKEMHEIQLS 500
           EG ++ A +L  +M   G +PN+  Y S ++   K GN E   +L  E     L+
Sbjct: 486 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523

[Close]

BLAST of Chy11G189820 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 7.2e-39
Identity = 141/535 (26.36%), Postives = 243/535 (45.42%), Query Frame = 0


Query: 2   SGPLLKR-TLRPIGN--STVQLQFSSSFSSSSPPTEPSPSTKPS---------ISTVVSV 61
           +G L+KR TL    N      LQ      S+   T P P   P          +  + +V
Sbjct: 6   TGLLMKRGTLSSFRNFIQLFSLQSRGLSFSTLTDTRPFPDYSPKKASVRDTEFVHQITNV 65

Query: 62  LTHQRSKSRWRFLNSL-CPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNKSLCNHNLIS 121
           +  +R++   R L    C   F       +L++IK +  L L FF W +++   + NL S
Sbjct: 66  IKLRRAEPLRRSLKPYECK--FKTDHLIWVLMKIKCDYRLVLDFFDWARSRR--DSNLES 125

Query: 122 YSTLIHILARGRLRTHAKDVIQTAIRAAELEDSDNYSNSERFSSSRPLKLFETLVKTYKR 181
              +IH+    +    A+ +I +     +L  +D++           ++ F+ LV TYK 
Sbjct: 126 LCIVIHLAVASKDLKVAQSLISSFWERPKLNVTDSF-----------VQFFDLLVYTYKD 185

Query: 182 CGSAPFVFDLLIKALLESKKLDSSIEIVRMLRSRGISPQVSTLNSLILLVSK-CQGANVA 241
            GS P VFD+  + L++   L  +  +   + + G+   V + N  +  +SK C     A
Sbjct: 186 WGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATA 245

Query: 242 YAIFREVFGLG---------------CE---IEEEH-----VKLKGRVSPNVHTFNTLMD 301
             +FRE   +G               C+   I+E H     ++LKG  +P+V +++T+++
Sbjct: 246 IIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKG-YTPDVISYSTVVN 305

Query: 302 CFYQDGFVGRVKEIWDQLADSNSTPNSYSYSILMTVLCEERRTGEAEELWEEMKMKKLEP 361
            + + G + +V ++ + +      PNSY Y  ++ +LC   +  EAEE + EM  + + P
Sbjct: 306 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 365

Query: 362 DVVAYNTIIGGFCKAGHTHRAEEFYREMELSGIESTFSTLEHLINGYCDTGDVDSALLVY 421
           D V Y T+I GFCK G    A +F+ EM    I     T   +I+G+C  GD+  A  ++
Sbjct: 366 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 425

Query: 422 KDMRRKQFSLNASMLEGLIRMLCAERRLLEALDVFGFAIEYSSFCPTMETFEILINELCQ 481
            +M  K    ++     LI   C    + +A  V    I+ +   P + T+  LI+ LC+
Sbjct: 426 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCK 485

Query: 482 EGKIEGAFKLQAQMVGKGFKPNLKIYQSFIDAYTKEGNAEMVEELWKEMHEIQLS 500
           EG ++ A +L  +M   G +PN+  Y S ++   K GN E   +L  E     L+
Sbjct: 486 EGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLN 523

The following BLAST results are available for this feature:

BLAST of Chy11G189820 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIM8	8.7e-122	45.91	Pentatricopeptide repeat-containing protein At2g15980 OS=Arabidopsis thaliana OX...	[more]
Q9SXD1	2.0e-38	28.66	Pentatricopeptide repeat-containing protein At1g62670, mitochondrial OS=Arabidop...	[more]
Q9SH26	3.5e-38	28.35	Pentatricopeptide repeat-containing protein At1g63400 OS=Arabidopsis thaliana OX...	[more]
Q0WVK7	1.0e-37	26.36	Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop...	[more]
Q9LQ14	5.0e-37	27.27	Pentatricopeptide repeat-containing protein At1g62930, chloroplastic OS=Arabidop...	[more]

BLAST of Chy11G189820 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LIN1	1.4e-279	97.19	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G239400 PE=4 SV=1	[more]
A0A5A7TQU6	8.3e-269	94.59	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A5D3CQ25	3.2e-268	94.39	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CAB5	3.2e-268	94.39	pentatricopeptide repeat-containing protein At2g15980 OS=Cucumis melo OX=3656 GN...	[more]
A0A6J1JGQ1	2.0e-230	81.16	pentatricopeptide repeat-containing protein At2g15980 OS=Cucurbita maxima OX=366...	[more]

BLAST of Chy11G189820 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145397.1	0.0	97.19	pentatricopeptide repeat-containing protein At2g15980 [Cucumis sativus] >XP_0116...	[more]
KAA0045943.1	0.0	94.59	pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]	[more]
XP_008459266.1	0.0	94.39	PREDICTED: pentatricopeptide repeat-containing protein At2g15980 [Cucumis melo] ...	[more]
XP_038901621.1	1.12e-300	85.77	pentatricopeptide repeat-containing protein At2g15980 [Benincasa hispida]	[more]
XP_023512842.1	3.88e-290	81.96	pentatricopeptide repeat-containing protein At2g15980 [Cucurbita pepo subsp. pep...	[more]

BLAST of Chy11G189820 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15980.1	6.2e-123	45.91	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G62670.1	1.5e-39	28.66	rna processing factor 2	[more]
AT1G63400.1	2.5e-39	28.35	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G05670.1	7.2e-39	26.36	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]
AT1G05670.2	7.2e-39	26.36	Pentatricopeptide repeat (PPR-like) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 470..495 e-value: 1.3E-4 score: 21.9 coord: 367..391 e-value: 1.3E-4 score: 22.0
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 254..302 e-value: 1.5E-9 score: 37.9
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 327..358 e-value: 1.7E-8 score: 32.1 coord: 366..395 e-value: 7.2E-6 score: 23.9 coord: 469..495 e-value: 1.8E-4 score: 19.5 coord: 434..466 e-value: 1.4E-5 score: 22.9 coord: 292..326 e-value: 2.4E-8 score: 31.7
IPR002885	Pentatricopeptide repeat	PFAM	PF12854	PPR_1	coord: 321..353 e-value: 1.5E-12 score: 47.0 coord: 428..458 e-value: 3.7E-6 score: 26.6
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 360..394 score: 9.722731
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 172..206 score: 9.054091
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 466..499 score: 9.174665
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 255..289 score: 9.339086
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 431..465 score: 10.621557
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 290..324 score: 11.783455
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 325..359 score: 12.58363
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 402..499 e-value: 6.4E-18 score: 66.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 243..400 e-value: 5.0E-38 score: 133.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 77..235 e-value: 1.9E-14 score: 55.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..42
None	No IPR available	PANTHER	PTHR47942	TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED	coord: 7..497
None	No IPR available	PANTHER	PTHR47942:SF14	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 7..497

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G189820.1	Chy11G189820.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding