Chy11G189340 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G189340
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Late embryogenesis abundant protein-like
Location	chrH11: 3237933 .. 3239806 (-)
RNA-Seq Expression	Chy11G189340
Synteny	Chy11G189340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAATGTGCGTGATGAACATGGGAACCCGGTTCAACTTACCGACGAACGTGGGAACCCGGTTCAACTGACCGACGAATTCGGTAACCCCATGCAGCTCACCGGTGTTGTTGGCACCACGCCTTCCAACCTCCATCCCACCCTACCTTCCAACCTCCACCCCACCACCGTCACCACCACAGGAGAAAACGTTGCTCAAACGCAGCCCCCTCGAGAAATCCATGACGCCTCACCGCGTCGTTCGAGCAGTTCCAACTCTAGCTCCGTGAGTAATTTGTGTTCAAGATGATTAATTCAATGAATATGCATTCGGTGGGGAATATGGATCATTTTTTTTGTCAAAAATAACATTGCGATTCATTCTTGGAACAACTTTTTTACATTACCATATTGTATCTAAACTTTAGACATTAAAGTTTAAAATATTCTGAATTATATTAGAATAAGATAAAAGTATACAATAATAAATATAATATTTCAAGTTATAAACTCAATTATTTTGGTTAAATTAAAATACAGTAACATATCCAAACTCTATAGATAGTTTTGTCTATTGACAGAATCTTATCTTATAAAAAAAAGAACTCTATAGACAGTAGCAGTATTATAAATAGAGTAAGATATCAAACTCTGTAAACAGTATCTTATTGAGGTTGATTTGCTCTATTTTATAAATATATTAGTTTTTTATATTTAAAAATAATTACAAATTAATAATTGTGATAACATTTTCAACCAAAAACAAATTCACACTTTAATAATTAGTAATAGTTTATATATATCCAGCTTTAATATATTAGTGAGGAGCCGTAATTTATTTGTAGTTTATAGTATGGGTGATCATTAGTTAGAGTCATTTTTAAAAAAATAACTCCGATAGTCAGTTTTGTAAAGGTTCAAACCGAAAGTAAGGTTCAATCCGAATCGATTTCACACTTAGAAATACTTTTTTGTAAATTCTCGATTCGAAAATTTTCGAAATCACACCTAGAAATACTTTTTGTAAATTCTTCGAAATCGACCTCCCGGTCCTTCTATCTATTATAAATATATTAGTGAACCCATATGAAAACATAAGATTATTTTTATTAGTAAAATTTTCGTTTTAGAGTTTGGTTTGAATTGACTTTCTGACCTTTTATGAACATTTTCTTTACACTTGTAAACACTAATCAAATTAGATTAGATTTAGAAGCTCTTAATTTGTACATATTAATTTTCAGTACGCTCTAATCTAATAAACAGAAGGTTAGAAGTTTATCTGATCTTAAAAAGTTTAGATGTTTTGGTTTTCGAGAAGTAGACGTCATAAACCTTACTTATAAATCTTATTCATAAATTTGTATAACCCAGCCCTGTTTTTCTTCTAGGTAGAAAAAATATATTAAAAAAAAAAAAAAACTTAAATGGGTGAGGGATCTTGATTTTGTTTGATCTATTTTATTTGAAAATGCCTTCTATTAAAAAATATATAGTTTTTATTAGAAAATTATTCTAAATAGTGAAGGTGCTGAAAATATCTATTACACACTTTAAAATTTTGTAAATATTTGTTGGTTTCATTTTGTAAGGTTTTGTCAGCTTAGTTTCTAAAACTAAGTAACCACACAATTATCAATTGGGATCTCAATAATCCTTTTTGTACAGTCGGAGGATGATGGACAAGGCGGGAGGAGAAGGAAGAAGAAAGGGTTGACACAGAAGATAAAGGAGAAGTTAACCGGAAGTGGAAAACACAAGGAGGTGGGCACGACGGGAGAGCATGGAGAGCATCACGAAAGCACCACCACCACCGTGACGGAACGTCACGAACCTGGGAAGAAGGGGGTCATGGAGAAGATCAAAGAGAAATTACCTGGCCACCATCATTGA

mRNA sequence

ATGGCGAATGTGCGTGATGAACATGGGAACCCGGTTCAACTTACCGACGAACGTGGGAACCCGGTTCAACTGACCGACGAATTCGGTAACCCCATGCAGCTCACCGGTGTTGTTGGCACCACGCCTTCCAACCTCCATCCCACCCTACCTTCCAACCTCCACCCCACCACCGTCACCACCACAGGAGAAAACGTTGCTCAAACGCAGCCCCCTCGAGAAATCCATGACGCCTCACCGCGTCGTTCGAGCAGTTCCAACTCTAGCTCCAAGATAAAGGAGAAGTTAACCGGAAGTGGAAAACACAAGGAGGTGGGCACGACGGGAGAGCATGGAGAGCATCACGAAAGCACCACCACCACCGTGACGGAACGTCACGAACCTGGGAAGAAGGGGGTCATGGAGAAGATCAAAGAGAAATTACCTGGCCACCATCATTGA

Coding sequence (CDS)

ATGGCGAATGTGCGTGATGAACATGGGAACCCGGTTCAACTTACCGACGAACGTGGGAACCCGGTTCAACTGACCGACGAATTCGGTAACCCCATGCAGCTCACCGGTGTTGTTGGCACCACGCCTTCCAACCTCCATCCCACCCTACCTTCCAACCTCCACCCCACCACCGTCACCACCACAGGAGAAAACGTTGCTCAAACGCAGCCCCCTCGAGAAATCCATGACGCCTCACCGCGTCGTTCGAGCAGTTCCAACTCTAGCTCCAAGATAAAGGAGAAGTTAACCGGAAGTGGAAAACACAAGGAGGTGGGCACGACGGGAGAGCATGGAGAGCATCACGAAAGCACCACCACCACCGTGACGGAACGTCACGAACCTGGGAAGAAGGGGGTCATGGAGAAGATCAAAGAGAAATTACCTGGCCACCATCATTGA

Protein sequence

MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTLPSNLHPTTVTTTGENVAQTQPPREIHDASPRRSSSSNSSSKIKEKLTGSGKHKEVGTTGEHGEHHESTTTTVTERHEPGKKGVMEKIKEKLPGHHH*

Homology

[Close]

BLAST of Chy11G189340 vs. ExPASy Swiss-Prot
Match: P21298 (Late embryogenesis abundant protein OS=Raphanus sativus OX=3726 PE=2 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 2.6e-18
Identity = 75/184 (40.76%), Postives = 98/184 (53.26%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTP-------SNL--HPT--- 60
           MA+++DE GNP+ LTD  GNPVQL+DEFGNPM +TGV  + P        N+  +PT   
Sbjct: 1   MADLKDERGNPIHLTDAYGNPVQLSDEFGNPMHITGVASSAPQYKDSVTGNIAEYPTEAP 60

Query: 61  ---LPSNLHPTTVTTTGENVAQTQPPREIHDA---SPRRSSSSNSSS------------- 120
              + +       T  G   ++T   +E H +     RRS SS+SSS             
Sbjct: 61  PAGVAAGTGAAATTAAGVTTSETTTGQEHHGSLGEHLRRSGSSSSSSSEDDGQGGRRKKS 120

Query: 121 ---KIKEKLTGSGKHKEVGTTGEHGEHHESTTTTVT-----ERHEPGKKGVMEKIKEKLP 146
              KIK+KL G GKHK+  T         +TTTT T     + HE  KKG++EKIKEKLP
Sbjct: 121 IKDKIKDKL-GGGKHKDEQTPTTATTTGPTTTTTTTGAAADQHHE--KKGILEKIKEKLP 180

[Close]

BLAST of Chy11G189340 vs. ExPASy Swiss-Prot
Match: Q96261 (Probable dehydrin LEA OS=Arabidopsis thaliana OX=3702 GN=LEA PE=2 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 1.1e-16
Identity = 80/190 (42.11%), Postives = 97/190 (51.05%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNP-VQLTDEFGNPMQLTGVVGTTPSNL---------HPT-L 60
           MA++RDE GNP+ LTD +GNP V LTDE GNPM LTGVV +TP +          HPT  
Sbjct: 1   MADLRDEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKESTTSDIAEHPTST 60

Query: 61  PSNLHP----------TTVTTTG--ENVAQTQPPREIH---DASPRRSSSSNSSS----- 120
               HP          T  T TG       T   ++ H   +   RRS SS+SSS     
Sbjct: 61  VGETHPAAAPAGAGAATAATATGVSAGTGATTTGQQHHGSLEEHLRRSGSSSSSSSEDDG 120

Query: 121 -----------KIKEKLTGSGKHKEVGTTGEHGEHHESTTT---TVTERHEPGKKGVMEK 146
                      KIKEK  GSGKHK+  T         +TTT   T  + HE  KKG++EK
Sbjct: 121 QGGRRKKSIKEKIKEKF-GSGKHKDEQTPA------TATTTGPATTDQPHE--KKGILEK 180

[Close]

BLAST of Chy11G189340 vs. ExPASy Swiss-Prot
Match: Q07322 (Embryogenic cell protein 40 OS=Daucus carota OX=4039 GN=ECP40 PE=1 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 3.4e-10
Identity = 29/46 (63.04%), Postives = 37/46 (80.43%), Query Frame = 0


Query: 1  MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLH 47
          MA++RDE GNP+QLTD+ GNPVQLTDE+GNP+ +TGV  T  +  H
Sbjct: 1  MADLRDEKGNPIQLTDQHGNPVQLTDEYGNPVHITGVATTGATTGH 46

[Close]

BLAST of Chy11G189340 vs. ExPASy Swiss-Prot
Match: P22238 (Desiccation-related protein clone PCC27-04 OS=Craterostigma plantagineum OX=4153 PE=2 SV=1)

HSP 1 Score: 45.8 bits (107), Expect = 4.8e-04
Identity = 37/80 (46.25%), Postives = 42/80 (52.50%), Query Frame = 0


Query: 80  RRSSSSNSSS---------------KIKEKLTGSGKHKEVGTTGEHGEHHESTTTTVTER 139
           R +SSS+SSS               K+KEKL G    K+ G  G       +TTTT    
Sbjct: 46  RSNSSSSSSSEDDGQGGRRKKPIKEKVKEKLPGGAGGKQTGECG-------TTTTTAAGG 105

Query: 140 HEPGKKGVMEKIKEKLPGHH 145
           HE  KKGVMEKIKEKLPG H
Sbjct: 106 HEE-KKGVMEKIKEKLPGQH 117

[Close]

BLAST of Chy11G189340 vs. ExPASy Swiss-Prot
Match: P28641 (Dehydrin DHN3 OS=Pisum sativum OX=3888 GN=DHN3 PE=2 SV=1)

HSP 1 Score: 45.4 bits (106), Expect = 6.2e-04
Identity = 47/165 (28.48%), Postives = 68/165 (41.21%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTLPSNLHPTTVTT 60
           M+  ++++G    +TDE GNPV   D++GNP+   G +       H       + TT   
Sbjct: 1   MSQYQNQYGAQTGMTDEYGNPVNQVDQYGNPISGGGGLTGEAGRQH-------YGTTGGA 60

Query: 61  TGENVAQTQPPREI---------------HDASPRRSSSSNSSS-KIKEKLTGSGKHKEV 120
           TG+     Q  R +               +   P   S++  S         GSG + + 
Sbjct: 61  TGQGHGHGQQHRGVDQTTGYGTHTGGVGGYGTKPEYGSTNTGSGYGTGTGYGGSGTNPDY 120

Query: 121 GTTGE-------HGEHHESTTTTVTERHEPGKKGVMEKIKEKLPG 143
           G+T          G     TT  V E H   KKGVM+KIKEK+PG
Sbjct: 121 GSTNTGSGYGTGTGYGGSGTTEYVREEHHGDKKGVMDKIKEKIPG 158

[Close]

BLAST of Chy11G189340 vs. ExPASy TrEMBL
Match: A0A0A0LPB7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249810 PE=3 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.8e-62
Identity = 136/165 (82.42%), Postives = 137/165 (83.03%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTLPSNLHPTTVTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPT PSNLHPT VTT
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTPPSNLHPTAVTT 60

Query: 61  TGENVAQTQPPREIHDASPRRSSSSNSSS------------------KIKEKLTGSGKHK 120
           TGENVAQTQPPREIHDASPRRSSSS+SSS                  KIKEKLTGSGKHK
Sbjct: 61  TGENVAQTQPPREIHDASPRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHK 120

Query: 121 EVGTTGEHGEHHESTTTTVT--ERHEPGKKGVMEKIKEKLPGHHH 146
           E GTT   GEHHESTTTT T  E HEPGKKGVMEKIKEKLPGHHH
Sbjct: 121 EAGTT---GEHHESTTTTTTSVEHHEPGKKGVMEKIKEKLPGHHH 162

[Close]

BLAST of Chy11G189340 vs. ExPASy TrEMBL
Match: A0A5D3DZ78 (Late embryogenesis abundant protein-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold303G00160 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 5.4e-51
Identity = 117/146 (80.14%), Postives = 120/146 (82.19%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTL-PSNLHPTTVT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPM LTGVVGTTPS L PT  PSNL PTT+ 
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVGTTPSKLDPTAPPSNLGPTTI- 60

Query: 61  TTGENVAQTQPPREIHDASPRRSSSSNSSSKIKEKLTGSGKHKEVGTTGEHGEHHESTTT 120
             GENVAQTQPPRE HD SPRRSSSS+SSSKIKEKLTGSGKHKE GT   H     +TT 
Sbjct: 61  --GENVAQTQPPREAHDTSPRRSSSSSSSSKIKEKLTGSGKHKEGGT---HDSTATTTTV 120

Query: 121 TVTERHEPGKKGVMEKIKEKLPGHHH 146
           T  E  E GKKGVMEKIKEKLPGHHH
Sbjct: 121 TSVEHQETGKKGVMEKIKEKLPGHHH 140

[Close]

BLAST of Chy11G189340 vs. ExPASy TrEMBL
Match: A0A1S3CDP4 (late embryogenesis abundant protein-like OS=Cucumis melo OX=3656 GN=LOC103499700 PE=3 SV=1)

HSP 1 Score: 199.1 bits (505), Expect = 1.2e-47
Identity = 117/164 (71.34%), Postives = 120/164 (73.17%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTL-PSNLHPTTVT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPM LTGVVGTTPS L PT  PSNL PTT+ 
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVGTTPSKLDPTAPPSNLGPTTI- 60

Query: 61  TTGENVAQTQPPREIHDASPRRSSSSNSSS------------------KIKEKLTGSGKH 120
             GENVAQTQPPRE HD SPRRSSSS+SSS                  KIKEKLTGSGKH
Sbjct: 61  --GENVAQTQPPREAHDTSPRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKH 120

Query: 121 KEVGTTGEHGEHHESTTTTVTERHEPGKKGVMEKIKEKLPGHHH 146
           KE GT   H     +TT T  E  E GKKGVMEKIKEKLPGHHH
Sbjct: 121 KEGGT---HDSTATTTTVTSVEHQETGKKGVMEKIKEKLPGHHH 158

[Close]

BLAST of Chy11G189340 vs. ExPASy TrEMBL
Match: A0A6J1JEI1 (late embryogenesis abundant protein-like OS=Cucurbita maxima OX=3661 GN=LOC111484299 PE=3 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 1.3e-31
Identity = 106/206 (51.46%), Postives = 116/206 (56.31%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGV--VGTTP------------SNLH 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+QLTGV   G+ P            + +H
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSHPVGNPVQMSEEFGNPMH 60

Query: 61  PT-------------------LPSNLHPTTVTTTGEN--------VAQTQPPREIHDASP 120
           PT                   L + +HPT V TTG          V +TQP RE HDAS 
Sbjct: 61  PTGVSTTGSKPVENPVQMNEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 RRSSSSNSSS------------------KIKEKLTGSGKHKEVGTTGEHGEHHESTTTTV 145
            RSSSS+SSS                  KIKEKLT  GKHKE GTT     HH+STT T 
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLT--GKHKEAGTTTTGAGHHQSTTVTS 180

[Close]

BLAST of Chy11G189340 vs. ExPASy TrEMBL
Match: A0A6J1FTT6 (late embryogenesis abundant protein-like OS=Cucurbita moschata OX=3662 GN=LOC111448732 PE=3 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 3.1e-30
Identity = 106/208 (50.96%), Postives = 116/208 (55.77%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGV--VGTTP------------SNLH 60
           MANVRDE GNPVQLTDERGNPVQLTDEFGNP+QLTGV   G+ P            + +H
Sbjct: 1   MANVRDEFGNPVQLTDERGNPVQLTDEFGNPVQLTGVATTGSQPVGNPVQMSEELGNPMH 60

Query: 61  PT-------------------LPSNLHPTTVTTTGEN--------VAQTQPPREIHDASP 120
           PT                   L + +HPT V TTG          V +TQP RE HDAS 
Sbjct: 61  PTGVSTTGFSPVGNPVQMSEELGNPMHPTGVATTGSKPVSSGGDVVGRTQPLREGHDASL 120

Query: 121 RRSSSSNSSS------------------KIKEKLTGSGKHKEVG--TTGEHGEHHESTTT 145
            RSSSS+SSS                  KIKEKLT  GKHKE G  TT     HH+STT 
Sbjct: 121 ARSSSSSSSSSEDDGQGGRRKKKKGLTQKIKEKLT--GKHKEAGTTTTTTGAGHHQSTTV 180

[Close]

BLAST of Chy11G189340 vs. NCBI nr
Match: XP_004150075.1 (embryogenic cell protein 40 [Cucumis sativus] >KGN61826.1 hypothetical protein Csa_006233 [Cucumis sativus])

HSP 1 Score: 246 bits (628), Expect = 3.65e-81
Identity = 136/165 (82.42%), Postives = 137/165 (83.03%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTLPSNLHPTTVTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPT PSNLHPT VTT
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTPPSNLHPTAVTT 60

Query: 61  TGENVAQTQPPREIHDASPRRSSSSNSSS------------------KIKEKLTGSGKHK 120
           TGENVAQTQPPREIHDASPRRSSSS+SSS                  KIKEKLTGSGKHK
Sbjct: 61  TGENVAQTQPPREIHDASPRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKHK 120

Query: 121 EVGTTGEHGEHHESTTTTVT--ERHEPGKKGVMEKIKEKLPGHHH 145
           E GTTGEH   HESTTTT T  E HEPGKKGVMEKIKEKLPGHHH
Sbjct: 121 EAGTTGEH---HESTTTTTTSVEHHEPGKKGVMEKIKEKLPGHHH 162

[Close]

BLAST of Chy11G189340 vs. NCBI nr
Match: KAA0045580.1 (late embryogenesis abundant protein-like [Cucumis melo var. makuwa] >TYK28814.1 late embryogenesis abundant protein-like [Cucumis melo var. makuwa])

HSP 1 Score: 209 bits (533), Expect = 5.24e-67
Identity = 119/150 (79.33%), Postives = 122/150 (81.33%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTLP-SNLHPTTVT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPM LTGVVGTTPS L PT P SNL PTT+ 
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVGTTPSKLDPTAPPSNLGPTTI- 60

Query: 61  TTGENVAQTQPPREIHDASPRRSSSSNSSSKIKEKLTGSGKHKEVGTTGEHGEHHESTTT 120
             GENVAQTQPPRE HD SPRRSSSS+SSSKIKEKLTGSGKHKE GT       H+ST T
Sbjct: 61  --GENVAQTQPPREAHDTSPRRSSSSSSSSKIKEKLTGSGKHKEGGT-------HDSTAT 120

Query: 121 TVT----ERHEPGKKGVMEKIKEKLPGHHH 145
           T T    E  E GKKGVMEKIKEKLPGHHH
Sbjct: 121 TTTVTSVEHQETGKKGVMEKIKEKLPGHHH 140

[Close]

BLAST of Chy11G189340 vs. NCBI nr
Match: XP_008460975.1 (PREDICTED: late embryogenesis abundant protein-like [Cucumis melo])

HSP 1 Score: 198 bits (504), Expect = 2.46e-62
Identity = 119/168 (70.83%), Postives = 122/168 (72.62%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTLP-SNLHPTTVT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPM LTGVVGTTPS L PT P SNL PTT+ 
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVGTTPSKLDPTAPPSNLGPTTI- 60

Query: 61  TTGENVAQTQPPREIHDASPRRSSSSNSSS------------------KIKEKLTGSGKH 120
             GENVAQTQPPRE HD SPRRSSSS+SSS                  KIKEKLTGSGKH
Sbjct: 61  --GENVAQTQPPREAHDTSPRRSSSSSSSSSEDDGQGGRRRKKKGLTQKIKEKLTGSGKH 120

Query: 121 KEVGTTGEHGEHHESTTTTVT----ERHEPGKKGVMEKIKEKLPGHHH 145
           KE GT       H+ST TT T    E  E GKKGVMEKIKEKLPGHHH
Sbjct: 121 KEGGT-------HDSTATTTTVTSVEHQETGKKGVMEKIKEKLPGHHH 158

[Close]

BLAST of Chy11G189340 vs. NCBI nr
Match: XP_038902144.1 (late embryogenesis abundant protein-like isoform X2 [Benincasa hispida])

HSP 1 Score: 181 bits (460), Expect = 1.38e-54
Identity = 109/164 (66.46%), Postives = 116/164 (70.73%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTLPSNLHPTTVTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPM LTGVV T+PS L  T        T T 
Sbjct: 83  MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATSPSKLDST--------TTTP 142

Query: 61  TGENVAQTQPPREIHDASPRRSSSSNSSS-----------------KIKEKLTGSGKHKE 120
            G++VAQTQ  RE HD SPRRSSSS+SSS                 KIKEKLTGSGKHKE
Sbjct: 143 AGDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRKKKGLTQKIKEKLTGSGKHKE 202

Query: 121 VGTTGEHGEHHESTTTTVT--ERHEPGKKGVMEKIKEKLPGHHH 145
            GTTG   EHH+STT T +  E  E GKKGVMEKIKE+LPGHHH
Sbjct: 203 AGTTG--AEHHQSTTVTTSTVEHQEHGKKGVMEKIKERLPGHHH 236

[Close]

BLAST of Chy11G189340 vs. NCBI nr
Match: XP_038902143.1 (embryogenic cell protein 40-like isoform X1 [Benincasa hispida])

HSP 1 Score: 177 bits (449), Expect = 7.38e-54
Identity = 108/168 (64.29%), Postives = 118/168 (70.24%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTLPSNLHPTTVTT 60
           MANVRDEHGNPVQLTDERGNPVQLTDEFGNPM LTGVV T+PS L  T  + +  T +  
Sbjct: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMHLTGVVATSPSKLDSTTTTPVSYTHLDV 60

Query: 61  ----TGENVAQTQPPREIHDASPRRSSSSNSSS-----------------KIKEKLTGSG 120
                G++VAQTQ  RE HD SPRRSSSS+SSS                 KIKEKLTGSG
Sbjct: 61  YKRQAGDDVAQTQLTREAHDGSPRRSSSSSSSSSEDDGQGGRRKKKGLTQKIKEKLTGSG 120

Query: 121 KHKEVGTTGEHGEHHESTTTTVT--ERHEPGKKGVMEKIKEKLPGHHH 145
           KHKE GTTG   EHH+STT T +  E  E GKKGVMEKIKE+LPGHHH
Sbjct: 121 KHKEAGTTG--AEHHQSTTVTTSTVEHQEHGKKGVMEKIKERLPGHHH 166

[Close]

BLAST of Chy11G189340 vs. TAIR 10
Match: AT2G21490.1 (dehydrin LEA )

HSP 1 Score: 87.8 bits (216), Expect = 7.8e-18
Identity = 80/190 (42.11%), Postives = 97/190 (51.05%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNP-VQLTDEFGNPMQLTGVVGTTPSNL---------HPT-L 60
           MA++RDE GNP+ LTD +GNP V LTDE GNPM LTGVV +TP +          HPT  
Sbjct: 1   MADLRDEKGNPIHLTDTQGNPIVDLTDEHGNPMYLTGVVSSTPQHKESTTSDIAEHPTST 60

Query: 61  PSNLHP----------TTVTTTG--ENVAQTQPPREIH---DASPRRSSSSNSSS----- 120
               HP          T  T TG       T   ++ H   +   RRS SS+SSS     
Sbjct: 61  VGETHPAAAPAGAGAATAATATGVSAGTGATTTGQQHHGSLEEHLRRSGSSSSSSSEDDG 120

Query: 121 -----------KIKEKLTGSGKHKEVGTTGEHGEHHESTTT---TVTERHEPGKKGVMEK 146
                      KIKEK  GSGKHK+  T         +TTT   T  + HE  KKG++EK
Sbjct: 121 QGGRRKKSIKEKIKEKF-GSGKHKDEQTPA------TATTTGPATTDQPHE--KKGILEK 180

[Close]

BLAST of Chy11G189340 vs. TAIR 10
Match: AT4G39130.1 (Dehydrin family protein )

HSP 1 Score: 68.2 bits (165), Expect = 6.4e-12
Identity = 58/152 (38.16%), Postives = 72/152 (47.37%), Query Frame = 0


Query: 1   MANVRDEHGNPVQLTDERGNPVQLTDEFGNPMQLTGVVGTTPSNLHPTLPSNLHPTTVTT 60
           MA+++DE GNP+ LTD  G P QL DEFGN M LTGV  T P +L  +  +  HP T   
Sbjct: 1   MADLKDERGNPIYLTDAHGEPAQLMDEFGNAMHLTGVATTVP-HLKESSYTGPHPITAPV 60

Query: 61  TGENVA-QTQPPREIHDASPRRSSSSNSSSKIKEKLTGSGKHKEV--GTTGEHGEHHEST 120
           T  N     QP    HD           +S  +E   G G+   +   T  + G    S 
Sbjct: 61  TTTNTPHHAQPISVSHDPLQDHDLRWFGTSSTEENGEGVGRKTNITDETKSKLGVDKPSA 120

Query: 121 TTTVTER----HEPGKKGVMEKIKEKLPGHHH 146
            T         HE  KKG  +KIKEKL GHH+
Sbjct: 121 ATVTGSGSGSVHE--KKGFFKKIKEKLSGHHN 149

[Close]

BLAST of Chy11G189340 vs. TAIR 10
Match: AT3G50980.1 (dehydrin xero 1 )

HSP 1 Score: 42.4 bits (98), Expect = 3.8e-04
Identity = 49/131 (37.40%), Postives = 59/131 (45.04%), Query Frame = 0


Query: 23  QLTDEFGNPMQLT----GVVGTTPSNLH-PTLPSNLHPTTVTTTGENVAQTQPPREIHDA 82
           Q  D+FGNP   T    G  G  P+      L   LH +  +++  +        E    
Sbjct: 15  QQLDQFGNPFPATTGAYGTAGGAPAVAEGGGLSGMLHRSGSSSSSSS--------EDDGL 74

Query: 83  SPRRSSSSNSSSKIKEKLTGSGKHKEVGTTGEHGEHHESTTT---TVTERHEPGKKGVME 142
             RR      + KIKEKL G   H +   T   G    STTT   T T  HE  KKG+ME
Sbjct: 75  GGRRRKKKGITEKIKEKLPG---HHDSNKTSSLG----STTTAYDTGTVHHE--KKGMME 128

Query: 143 KIKEKLPGHHH 146
           KIKEKLPG HH
Sbjct: 135 KIKEKLPGGHH 128

The following BLAST results are available for this feature:

BLAST of Chy11G189340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P21298	2.6e-18	40.76	Late embryogenesis abundant protein OS=Raphanus sativus OX=3726 PE=2 SV=1	[more]
Q96261	1.1e-16	42.11	Probable dehydrin LEA OS=Arabidopsis thaliana OX=3702 GN=LEA PE=2 SV=1	[more]
Q07322	3.4e-10	63.04	Embryogenic cell protein 40 OS=Daucus carota OX=4039 GN=ECP40 PE=1 SV=1	[more]
P22238	4.8e-04	46.25	Desiccation-related protein clone PCC27-04 OS=Craterostigma plantagineum OX=4153...	[more]
P28641	6.2e-04	28.48	Dehydrin DHN3 OS=Pisum sativum OX=3888 GN=DHN3 PE=2 SV=1	[more]

BLAST of Chy11G189340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPB7	1.8e-62	82.42	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249810 PE=3 SV=1	[more]
A0A5D3DZ78	5.4e-51	80.14	Late embryogenesis abundant protein-like OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A1S3CDP4	1.2e-47	71.34	late embryogenesis abundant protein-like OS=Cucumis melo OX=3656 GN=LOC103499700...	[more]
A0A6J1JEI1	1.3e-31	51.46	late embryogenesis abundant protein-like OS=Cucurbita maxima OX=3661 GN=LOC11148...	[more]
A0A6J1FTT6	3.1e-30	50.96	late embryogenesis abundant protein-like OS=Cucurbita moschata OX=3662 GN=LOC111...	[more]

BLAST of Chy11G189340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004150075.1	3.65e-81	82.42	embryogenic cell protein 40 [Cucumis sativus] >KGN61826.1 hypothetical protein C...	[more]
KAA0045580.1	5.24e-67	79.33	late embryogenesis abundant protein-like [Cucumis melo var. makuwa] >TYK28814.1 ...	[more]
XP_008460975.1	2.46e-62	70.83	PREDICTED: late embryogenesis abundant protein-like [Cucumis melo]	[more]
XP_038902144.1	1.38e-54	66.46	late embryogenesis abundant protein-like isoform X2 [Benincasa hispida]	[more]
XP_038902143.1	7.38e-54	64.29	embryogenic cell protein 40-like isoform X1 [Benincasa hispida]	[more]

BLAST of Chy11G189340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G21490.1	7.8e-18	42.11	dehydrin LEA	[more]
AT4G39130.1	6.4e-12	38.16	Dehydrin family protein	[more]
AT3G50980.1	3.8e-04	37.40	dehydrin xero 1	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000167	Dehydrin	PFAM	PF00257	Dehydrin	coord: 22..144 e-value: 1.6E-8 score: 35.2
IPR000167	Dehydrin	PANTHER	PTHR33346	DEHYDRIN XERO 2-RELATED	coord: 1..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..68
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 94..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..145
None	No IPR available	PANTHER	PTHR33346:SF5	DEHYDRIN XERO 2-RELATED	coord: 1..145
IPR030513	Dehydrin, conserved site	PROSITE	PS00823	DEHYDRIN_2	coord: 135..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G189340.1	Chy11G189340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009631	cold acclimation
biological_process	GO:0009737	response to abscisic acid
biological_process	GO:0009414	response to water deprivation
biological_process	GO:0009415	response to water
cellular_component	GO:0005829	cytosol