Chy11G188780 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTTACTGCTATGGATGTAAACCTCGCCCTTCCGGTCCTCTTCCCGGCCCTATCCTTCTGCTTCTCGCCGTGGTTTTCATCTTGATCGCCTTGTCCTCCCTTTTCCCCTCCGAACCAATCGACTTCTCCGAATTTCAAATCAACTGGCCTCTTCTCGCTGTTCCGATTATCATTCTTATTCTTGTTCGTTGTTTAGCATCCATGGATTCTTCACCCAGGTACTATGCTTGCCCTTGCGATCGTGGCTGGAAGATGCACTGTCGGTGCGGCCGTGGTAGCGCGTGGTAACTGCTAAACCTAATTTAATTGAAAATTCGTTTCATCATATATACTTAATCGTTGTTTTAGTGTAAATTATAAAGAGGATGAGATTGTGATATATGGAATTGTGATGATCGTGTTGAAGGATTATGATCCATTGATGTGA ATGACTTACTGCTATGGATGTAAACCTCGCCCTTCCGGTCCTCTTCCCGGCCCTATCCTTCTGCTTCTCGCCGTGGTTTTCATCTTGATCGCCTTGTCCTCCCTTTTCCCCTCCGAACCAATCGACTTCTCCGAATTTCAAATCAACTGGCCTCTTCTCGCTGTTCCGATTATCATTCTTATTCTTGTTCGTTGTTTAGCATCCATGGATTCTTCACCCAGGTACTATGCTTGCCCTTGCGATCGTGGCTGGAAGATGCACTGTCGTGTAAATTATAAAGAGGATGAGATTGTGATATATGGAATTGTGATGATCGTGTTGAAGGATTATGATCCATTGATGTGA ATGACTTACTGCTATGGATGTAAACCTCGCCCTTCCGGTCCTCTTCCCGGCCCTATCCTTCTGCTTCTCGCCGTGGTTTTCATCTTGATCGCCTTGTCCTCCCTTTTCCCCTCCGAACCAATCGACTTCTCCGAATTTCAAATCAACTGGCCTCTTCTCGCTGTTCCGATTATCATTCTTATTCTTGTTCGTTGTTTAGCATCCATGGATTCTTCACCCAGGTACTATGCTTGCCCTTGCGATCGTGGCTGGAAGATGCACTGTCGTGTAAATTATAAAGAGGATGAGATTGTGATATATGGAATTGTGATGATCGTGTTGAAGGATTATGATCCATTGATGTGA MTYCYGCKPRPSGPLPGPILLLLAVVFILIALSSLFPSEPIDFSEFQINWPLLAVPIIILILVRCLASMDSSPRYYACPCDRGWKMHCRVNYKEDEIVIYGIVMIVLKDYDPLM* Homology
BLAST of Chy11G188780 vs. ExPASy TrEMBL
Match: A0A0A0LJB6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G263880 PE=4 SV=1) HSP 1 Score: 191.4 bits (485), Expect = 2.0e-45 Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of Chy11G188780 vs. ExPASy TrEMBL
Match: A0A5D3BJW1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001670 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 8.6e-44 Identity = 85/92 (92.39%), Postives = 90/92 (97.83%), Query Frame = 0
BLAST of Chy11G188780 vs. ExPASy TrEMBL
Match: A0A2I0LDH6 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_000947 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 7.3e-11 Identity = 43/90 (47.78%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of Chy11G188780 vs. ExPASy TrEMBL
Match: A0A1R3JDI7 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_17251 PE=4 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 2.2e-07 Identity = 35/86 (40.70%), Postives = 52/86 (60.47%), Query Frame = 0
BLAST of Chy11G188780 vs. ExPASy TrEMBL
Match: A0A6J1AFV4 (uncharacterized protein LOC110417586 OS=Herrania umbratica OX=108875 GN=LOC110417586 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 8.4e-07 Identity = 37/86 (43.02%), Postives = 52/86 (60.47%), Query Frame = 0
BLAST of Chy11G188780 vs. NCBI nr
Match: KGN61893.1 (hypothetical protein Csa_006600 [Cucumis sativus]) HSP 1 Score: 189 bits (479), Expect = 6.24e-60 Identity = 88/89 (98.88%), Postives = 89/89 (100.00%), Query Frame = 0
BLAST of Chy11G188780 vs. NCBI nr
Match: KAA0045689.1 (hypothetical protein E6C27_scaffold243G002050 [Cucumis melo var. makuwa] >TYJ99593.1 hypothetical protein E5676_scaffold123G001670 [Cucumis melo var. makuwa]) HSP 1 Score: 184 bits (466), Expect = 6.00e-58 Identity = 85/92 (92.39%), Postives = 90/92 (97.83%), Query Frame = 0
BLAST of Chy11G188780 vs. NCBI nr
Match: KAG6571042.1 (hypothetical protein SDJN03_29957, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 174 bits (441), Expect = 3.78e-54 Identity = 79/89 (88.76%), Postives = 86/89 (96.63%), Query Frame = 0
BLAST of Chy11G188780 vs. NCBI nr
Match: KAG6605007.1 (hypothetical protein SDJN03_02324, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 152 bits (383), Expect = 3.68e-45 Identity = 74/92 (80.43%), Postives = 80/92 (86.96%), Query Frame = 0
BLAST of Chy11G188780 vs. NCBI nr
Match: PKI78722.1 (hypothetical protein CRG98_000947 [Punica granatum]) HSP 1 Score: 74.3 bits (181), Expect = 1.39e-14 Identity = 43/90 (47.78%), Postives = 55/90 (61.11%), Query Frame = 0
BLAST of Chy11G188780 vs. TAIR 10
Match: AT2G21185.1 (unknown protein; Has 9 Blast hits to 9 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 9; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 1.7e-07 Identity = 33/88 (37.50%), Postives = 52/88 (59.09%), Query Frame = 0
BLAST of Chy11G188780 vs. TAIR 10
Match: AT2G21180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19875.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 2.0e-05 Identity = 25/59 (42.37%), Postives = 40/59 (67.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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