Chy11G188480 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGAGGTTAATCTTATCAACCATGTTGCCATTTCGTTATCTCGTAGGATGTAACCTCACATTTACTATGCAAAAAAAGAGTTTGAAATTAACTCATTTATTCATTCCCAATCTGCAGGACAGTCGATGTTCAAGTTGCCAAAGATCTCTTAGAAAAGGGTCGCCTCTGTTTGGATGTCAGGTCGGCTTATATATAAATATATATAATCAAAGGTAATAAAGCTAAATAACTGAAGAGATGGTTTTGGTTGCAGAACAGTTGAAGAGTATAACAAAGGCCATGTTGAGAATGCACTAAATGTTCCTTACGTGTTCTTCACCCCAGAAGGTAATAACCAGCTGTCCACTACCTGTATGATTTTGTTCTAAAAGTAAGCTAAACTCTACAGTTTTAGGATGTTTTCACTGCTAAGCATTGACCTAGATGCATTTTCTTAGATCAACTCTCGTATGTTTGATCCTATAGAATCTGACAGTTTGCTAACAAACAGGTCAAGTAAAGAATCCCGACTTTCTAGCACAAGTTACATCCATATTAAAGAAGGAAGATCATATAGTAGTGGTAAGAAGAAAAACTATTCCTCGGTGTTGCTACTTTTATATCCCAATGCAGATTCAAGAGTAAAATTGAAACAAATTGCAAATTATTTACCTATTTGTGCAGAATTGCAATAGAGGTGGTAGAGGCCTTCGTGCTTGCGTCGATCTTCTTAACGCGGTAAGATTTGAGATGCTAGAACTAGTTTGCAAGGTTGACTAGACCTGCAAAAGAAAAGGATAAGTAATAATAAGATTTAGTGAGAAATTTCAGGGCTTCGAGCATGTGAATAACATGGGAGGAGGCTACTCTGCTTGGGTTGACAGTGGATTTGCTGGTGAGAAACCACCTGAAGAACTCAAAACAGCTTGCAAGTTCCGAGGTAGTTTATCATAAATTCCATATTTCAGGAAGTTAGAGTACTTCCAAGGAGTTTGTTGTAAGCTTGAACTAAGTGAACAGTGTTTGTAGTCTGTGTTGTGCTACAGAATAAATATTTAGTTCCAGCATTTCTGCAGGTTTCACTGTCTGTTGTACAAAAGAAAAAGTCTCGAAGTTCCAATTTCTTCTTCTTTCAGCTCTGA ATGGAGAGGACAGTCGATGTTCAAGTTGCCAAAGATCTCTTAGAAAAGGGTCGCCTCTGTTTGGATGTCAGAACAGTTGAAGAGTATAACAAAGGCCATGTTGAGAATGCACTAAATGTTCCTTACGTGTTCTTCACCCCAGAAGTGGATTTGCTGGTGAGAAACCACCTGAAGAACTCAAAACAGCTTGCAAGTTCCGAGAATAAATATTTAGTTCCAGCATTTCTGCAGGTTTCACTGTCTGTTGTACAAAAGAAAAAGTCTCGAAGTTCCAATTTCTTCTTCTTTCAGCTCTGA ATGGAGAGGACAGTCGATGTTCAAGTTGCCAAAGATCTCTTAGAAAAGGGTCGCCTCTGTTTGGATGTCAGAACAGTTGAAGAGTATAACAAAGGCCATGTTGAGAATGCACTAAATGTTCCTTACGTGTTCTTCACCCCAGAAGTGGATTTGCTGGTGAGAAACCACCTGAAGAACTCAAAACAGCTTGCAAGTTCCGAGAATAAATATTTAGTTCCAGCATTTCTGCAGGTTTCACTGTCTGTTGTACAAAAGAAAAAGTCTCGAAGTTCCAATTTCTTCTTCTTTCAGCTCTGA MERTVDVQVAKDLLEKGRLCLDVRTVEEYNKGHVENALNVPYVFFTPEVDLLVRNHLKNSKQLASSENKYLVPAFLQVSLSVVQKKKSRSSNFFFFQL* Homology
BLAST of Chy11G188480 vs. ExPASy Swiss-Prot
Match: F4IPI4 (Rhodanese-like domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=STR17 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 3.7e-08 Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 0
BLAST of Chy11G188480 vs. ExPASy Swiss-Prot
Match: Q8RUD6 (Protein HIGH ARSENIC CONTENT 1, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=HAC1 PE=1 SV=1) HSP 1 Score: 54.7 bits (130), Expect = 7.0e-07 Identity = 29/69 (42.03%), Postives = 38/69 (55.07%), Query Frame = 0
BLAST of Chy11G188480 vs. ExPASy Swiss-Prot
Match: Q9FKW8 (Thiosulfate sulfurtransferase 18 OS=Arabidopsis thaliana OX=3702 GN=STR18 PE=1 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 6.5e-05 Identity = 27/71 (38.03%), Postives = 41/71 (57.75%), Query Frame = 0
BLAST of Chy11G188480 vs. ExPASy Swiss-Prot
Match: Q39129 (Thiosulfate sulfurtransferase 16, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=STR16 PE=1 SV=2) HSP 1 Score: 45.1 bits (105), Expect = 5.5e-04 Identity = 22/40 (55.00%), Postives = 28/40 (70.00%), Query Frame = 0
BLAST of Chy11G188480 vs. ExPASy TrEMBL
Match: A0A0A0LMB7 (Rhodanese domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G270150 PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.4e-18 Identity = 51/72 (70.83%), Postives = 56/72 (77.78%), Query Frame = 0
BLAST of Chy11G188480 vs. ExPASy TrEMBL
Match: A0A5D3BKL1 (Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001240 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.9e-15 Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of Chy11G188480 vs. ExPASy TrEMBL
Match: A0A5A7TUB4 (Rhodanese-like domain-containing protein 19 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G002460 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.9e-15 Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of Chy11G188480 vs. ExPASy TrEMBL
Match: A0A1S3C5M3 (rhodanese-like domain-containing protein 19, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497320 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.9e-15 Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of Chy11G188480 vs. ExPASy TrEMBL
Match: A0A1S3C7C4 (rhodanese-like domain-containing protein 19, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497320 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 1.9e-15 Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of Chy11G188480 vs. NCBI nr
Match: XP_004147071.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Cucumis sativus] >KGN61922.1 hypothetical protein Csa_006618 [Cucumis sativus]) HSP 1 Score: 101 bits (252), Expect = 3.36e-25 Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0
BLAST of Chy11G188480 vs. NCBI nr
Match: XP_008457677.1 (PREDICTED: rhodanese-like domain-containing protein 19, mitochondrial isoform X2 [Cucumis melo] >TYJ99554.1 rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa]) HSP 1 Score: 92.0 bits (227), Expect = 1.91e-21 Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of Chy11G188480 vs. NCBI nr
Match: KAA0045726.1 (rhodanese-like domain-containing protein 19 [Cucumis melo var. makuwa]) HSP 1 Score: 92.0 bits (227), Expect = 1.96e-21 Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of Chy11G188480 vs. NCBI nr
Match: XP_008457676.1 (PREDICTED: rhodanese-like domain-containing protein 19, mitochondrial isoform X1 [Cucumis melo]) HSP 1 Score: 92.0 bits (227), Expect = 2.36e-21 Identity = 44/48 (91.67%), Postives = 45/48 (93.75%), Query Frame = 0
BLAST of Chy11G188480 vs. NCBI nr
Match: XP_038901855.1 (protein HIGH ARSENIC CONTENT 1, mitochondrial [Benincasa hispida]) HSP 1 Score: 85.9 bits (211), Expect = 6.20e-19 Identity = 40/45 (88.89%), Postives = 43/45 (95.56%), Query Frame = 0
BLAST of Chy11G188480 vs. TAIR 10
Match: AT2G17850.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 58.9 bits (141), Expect = 2.6e-09 Identity = 31/71 (43.66%), Postives = 43/71 (60.56%), Query Frame = 0
BLAST of Chy11G188480 vs. TAIR 10
Match: AT2G21045.1 (Rhodanese/Cell cycle control phosphatase superfamily protein ) HSP 1 Score: 54.7 bits (130), Expect = 5.0e-08 Identity = 29/69 (42.03%), Postives = 38/69 (55.07%), Query Frame = 0
BLAST of Chy11G188480 vs. TAIR 10
Match: AT5G66170.1 (sulfurtransferase 18 ) HSP 1 Score: 48.1 bits (113), Expect = 4.6e-06 Identity = 27/71 (38.03%), Postives = 41/71 (57.75%), Query Frame = 0
BLAST of Chy11G188480 vs. TAIR 10
Match: AT5G66170.2 (sulfurtransferase 18 ) HSP 1 Score: 48.1 bits (113), Expect = 4.6e-06 Identity = 27/71 (38.03%), Postives = 41/71 (57.75%), Query Frame = 0
BLAST of Chy11G188480 vs. TAIR 10
Match: AT5G66170.3 (sulfurtransferase 18 ) HSP 1 Score: 48.1 bits (113), Expect = 4.6e-06 Identity = 27/71 (38.03%), Postives = 41/71 (57.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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