Chy11G187870 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G187870
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Mads box protein
Location	chrH11: 1962280 .. 1962843 (+)
RNA-Seq Expression	Chy11G187870
Synteny	Chy11G187870

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGAAATCATTGGGCCGTCAAAAGATCGAAATCAAGAAGCTAAATGTGAAGAGTAGACGGCAAGTAACCTTCTCCAAACGCCGTGCTGGGCTCTTCAACAAGGCCGCGGAGCTCTCCATTCTCTCCGGCGCTGAGATTGCTATTCTCGTCTTCTCTTCCACTGACAAAATCTATACATTCGGCCATCCTAATGTTGATTTCCTCATTGATCGTTTCCTGACGTCCAATTTTGTTCCGCCCAAGCCGGTGGAAGCGTACCTCCCTTTGGAGGAGTTGAATCGTGATTTGAAGGATGTGACTGCGGAGTTTGAAACAGAGAAGAGGCGCGCTGAGAGAATGAGGAAAACTGGGGGGTTTTGGTGGGATGAGGAGATGGAATGTATGGGAATTGAGGATCTGAAGCGATTCCGGTCGTCGTTGATGGAACTGAGAGGAAAAGTTGCGGAGAGAGTGGAGGAATTGGCGGCGGTGAGGAATCGAGGGTTTCTAACTACTTCGCCGTCGTTTCATCATCACTCCGTCGCGACGGAGATTGACGATTTATTTGATTTTAGTTTTTGA

mRNA sequence

ATGAAGAAATCATTGGGCCGTCAAAAGATCGAAATCAAGAAGCTAAATGTGAAGAGTAGACGGCAAGTAACCTTCTCCAAACGCCGTGCTGGGCTCTTCAACAAGGCCGCGGAGCTCTCCATTCTCTCCGGCGCTGAGATTGCTATTCTCGTCTTCTCTTCCACTGACAAAATCTATACATTCGGCCATCCTAATGTTGATTTCCTCATTGATCGTTTCCTGACGTCCAATTTTGTTCCGCCCAAGCCGGTGGAAGCGTACCTCCCTTTGGAGGAGTTGAATCGTGATTTGAAGGATGTGACTGCGGAGTTTGAAACAGAGAAGAGGCGCGCTGAGAGAATGAGGAAAACTGGGGGGTTTTGGTGGGATGAGGAGATGGAATGTATGGGAATTGAGGATCTGAAGCGATTCCGGTCGTCGTTGATGGAACTGAGAGGAAAAGTTGCGGAGAGAGTGGAGGAATTGGCGGCGGTGAGGAATCGAGGGTTTCTAACTACTTCGCCGTCGTTTCATCATCACTCCGTCGCGACGGAGATTGACGATTTATTTGATTTTAGTTTTTGA

Coding sequence (CDS)

ATGAAGAAATCATTGGGCCGTCAAAAGATCGAAATCAAGAAGCTAAATGTGAAGAGTAGACGGCAAGTAACCTTCTCCAAACGCCGTGCTGGGCTCTTCAACAAGGCCGCGGAGCTCTCCATTCTCTCCGGCGCTGAGATTGCTATTCTCGTCTTCTCTTCCACTGACAAAATCTATACATTCGGCCATCCTAATGTTGATTTCCTCATTGATCGTTTCCTGACGTCCAATTTTGTTCCGCCCAAGCCGGTGGAAGCGTACCTCCCTTTGGAGGAGTTGAATCGTGATTTGAAGGATGTGACTGCGGAGTTTGAAACAGAGAAGAGGCGCGCTGAGAGAATGAGGAAAACTGGGGGGTTTTGGTGGGATGAGGAGATGGAATGTATGGGAATTGAGGATCTGAAGCGATTCCGGTCGTCGTTGATGGAACTGAGAGGAAAAGTTGCGGAGAGAGTGGAGGAATTGGCGGCGGTGAGGAATCGAGGGTTTCTAACTACTTCGCCGTCGTTTCATCATCACTCCGTCGCGACGGAGATTGACGATTTATTTGATTTTAGTTTTTGA

Protein sequence

MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYTFGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGFWWDEEMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTTSPSFHHHSVATEIDDLFDFSF*

Homology

[Close]

BLAST of Chy11G187870 vs. ExPASy Swiss-Prot
Match: Q9FKK2 (Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=1 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.3e-27
Identity = 75/195 (38.46%), Postives = 112/195 (57.44%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60
           +KKS GRQKIE+ K+  +S  QVTFSKRR+GLF KA+EL  L GAE+AI+VFS   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDFLIDRFLTSNFVPP--------KPVEAYLPLEELNRDLKDVTAEFETEKRRAE 120
           FGHPNVD +IDRF+ +N +PP        +       +++LN  L  V ++ ETEK++ +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 RMRKTG------GFWWDEEMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTT 180
            ++K        G WW++ +E + +  L+ F+ +L  L+  V              F   
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASRFFQANVPNFYVG 181

Query: 181 SPSFHHHSVATEIDD 182
           S S   ++ A  IDD
Sbjct: 182 SSS---NNAAFGIDD 193

[Close]

BLAST of Chy11G187870 vs. ExPASy Swiss-Prot
Match: Q4PSU4 (Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=1 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 1.5e-21
Identity = 65/159 (40.88%), Postives = 97/159 (61.01%), Query Frame = 0


Query: 2   KKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYTF 61
           K+S+GRQKI + K+  +S RQVTFSKRRAGLF KA+EL  L GAEI I+VFS   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDFLIDRFLTSN---FVPPKPVEAYLPLE-ELNRDLKDVTAEFETEKR-------- 121
           GHP+V+ ++DR+++ N       + ++       ELN  L  + +E E EK+        
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 RAERMRKTGGFWWDEEMECMGIEDLKRFRSSLMELRGKV 149
           R E +R++   WW++ +E M +  L+  + +L ELR  V
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of Chy11G187870 vs. ExPASy Swiss-Prot
Match: Q9LMM8 (Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=2 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.0e-19
Identity = 70/181 (38.67%), Postives = 97/181 (53.59%), Query Frame = 0


Query: 2   KKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYTF 61
           +K+LGR+KIE+ K+  +S  QVTFSKRR+GLF K +EL  L  AEIAI+VFS + K Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDFLIDRFL-------TSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKR----- 121
           GHPNV+ L+D  L        +NF   +     L ++ LN  L +V AE E E+      
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESR---TKLRIQMLNESLTEVMAEKEKEQETKQSI 122

Query: 122 -RAERMRKTGGFWWDEEMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTTSP 170
            + ER  K    WW      + +      +  L  L+ +V E+V +L   RN  F   S 
Sbjct: 123 VQNERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQLHH-RNLNFYVGSS 179

[Close]

BLAST of Chy11G187870 vs. ExPASy Swiss-Prot
Match: O80807 (Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.8e-19
Identity = 64/179 (35.75%), Postives = 95/179 (53.07%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60
           +KK+LGR+K+EI K+  +S  QVTFSKR+AGLF KA+E   L  A+IA++VFS   K+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDFLIDRF----LTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKR------R 120
           FGHPNVD L+D F    +  N          L ++ LN+   +V AE E E++      +
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 AERMRKTGGFWWDEEMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTTSPS 170
            ER  +    WW +    + +         L +L+  V E+  +L    N  F   S S
Sbjct: 122 NERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLIHQTNPNFYVGSSS 180

[Close]

BLAST of Chy11G187870 vs. ExPASy Swiss-Prot
Match: O64703 (Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=2 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 5.4e-16
Identity = 55/162 (33.95%), Postives = 92/162 (56.79%), Query Frame = 0


Query: 5   LGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYTFGHP 64
           +GR+KI+++ +   + RQVTFSKRR GLF KA+EL+ L  AE+ I+VFS   K +++G P
Sbjct: 1   MGRRKIKMEMVQDMNTRQVTFSKRRTGLFKKASELATLCNAELGIVVFSPGGKPFSYGKP 60

Query: 65  NVDFLIDRFL----TSNFVPPKPVEAYLP-LEELNRDLKDVTAEFETEKRRA----ERMR 124
           N+D + +RF+     S+    +    Y P L+ L+  L  +  E E EK R     E++ 
Sbjct: 61  NLDSVAERFMREYDDSDSGDEEKSGNYRPKLKRLSERLDLLNQEVEAEKERGEKSQEKLE 120

Query: 125 KTGGFWWDEEMECMGIEDLKRFRSSLMELRGKVAERVEELAA 158
             G   + E +E + +++L  ++  L  + G++  +V  L A
Sbjct: 121 SAGDERFKESIETLTLDELNEYKDRLQTVHGRIEGQVNHLQA 162

[Close]

BLAST of Chy11G187870 vs. ExPASy TrEMBL
Match: A0A0A0LLS2 (Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.5e-93
Identity = 182/186 (97.85%), Postives = 183/186 (98.39%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60
           MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120
           FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120

Query: 121 WWDEEMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTTSPSFHHHSVATEID 180
           WWDE MECMGIEDLKRFRSSLMELRGKVAERVEELAAVRN+GFLTTSPSFHH SVATEID
Sbjct: 121 WWDEAMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQGFLTTSPSFHHLSVATEID 180

Query: 181 DLFDFS 187
           DLF FS
Sbjct: 181 DLFYFS 186

[Close]

BLAST of Chy11G187870 vs. ExPASy TrEMBL
Match: A0A5D3BKF4 (Aspartic proteinase CDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00600 PE=3 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.1e-78
Identity = 162/183 (88.52%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60
           MKKS GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSST KIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120
           FGHPNVD LIDRFLTSNFVP KP EAYLPLEELNRDLKD TAEFE EK RAERMR TGGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDE-EMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTTSPSFHHHSVATEI 180
           WWDE EMECMGIE+LKRFRSSLMELRGKVAE+VEELAAV N+  L TSPSFHHH  AT I
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFHHH--ATTI 180

Query: 181 DDL 183
           +DL
Sbjct: 181 EDL 180

[Close]

BLAST of Chy11G187870 vs. ExPASy TrEMBL
Match: A0A5A7TV93 (Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003090 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.1e-78
Identity = 162/183 (88.52%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60
           MKKS GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSST KIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120
           FGHPNVD LIDRFLTSNFVP KP EAYLPLEELNRDLKD TAEFE EK RAERMR TGGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDE-EMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTTSPSFHHHSVATEI 180
           WWDE EMECMGIE+LKRFRSSLMELRGKVAE+VEELAAV N+  L TSPSFHHH  AT I
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFHHH--ATTI 180

Query: 181 DDL 183
           +DL
Sbjct: 181 EDL 180

[Close]

BLAST of Chy11G187870 vs. ExPASy TrEMBL
Match: A0A1S3C5V9 (agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103497390 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.1e-78
Identity = 162/183 (88.52%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60
           MKKS GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSST KIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120
           FGHPNVD LIDRFLTSNFVP KP EAYLPLEELNRDLKD TAEFE EK RAERMR TGGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDE-EMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTTSPSFHHHSVATEI 180
           WWDE EMECMGIE+LKRFRSSLMELRGKVAE+VEELAAV N+  L TSPSFHHH  AT I
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFHHH--ATTI 180

Query: 181 DDL 183
           +DL
Sbjct: 181 EDL 180

[Close]

BLAST of Chy11G187870 vs. ExPASy TrEMBL
Match: A0A6J1FUA9 (agamous-like MADS-box protein AGL61 OS=Cucurbita moschata OX=3662 GN=LOC111448852 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 2.1e-55
Identity = 116/162 (71.60%), Postives = 131/162 (80.86%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60
           MKKSLGR+KIEIKKL  KS +QVTFSKRRAGLFNKAAELS+L GAEIAILV SS +K+YT
Sbjct: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVASSRNKLYT 60

Query: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120
           FGHPNV+ L+DRFLT N  PPKP EAYLPLEELNRD  DV AE++ EKRR         F
Sbjct: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLEELNRDFDDVAAEYDIEKRRTAERLSNDRF 120

Query: 121 WWDEEMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRG 163
           WWDE +E M I+DLKRFRSSL++LRGKVAERVE+  A+R  G
Sbjct: 121 WWDEPLESMKIDDLKRFRSSLVDLRGKVAERVEKFTAMRKEG 162

[Close]

BLAST of Chy11G187870 vs. NCBI nr
Match: XP_004149713.1 (agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN61964.1 hypothetical protein Csa_006560 [Cucumis sativus])

HSP 1 Score: 350 bits (897), Expect = 4.71e-121
Identity = 182/186 (97.85%), Postives = 183/186 (98.39%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60
           MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT
Sbjct: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60

Query: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120
           FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF
Sbjct: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120

Query: 121 WWDEEMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTTSPSFHHHSVATEID 180
           WWDE MECMGIEDLKRFRSSLMELRGKVAERVEELAAVRN+GFLTTSPSFHH SVATEID
Sbjct: 121 WWDEAMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNQGFLTTSPSFHHLSVATEID 180

Query: 181 DLFDFS 186
           DLF FS
Sbjct: 181 DLFYFS 186

[Close]

BLAST of Chy11G187870 vs. NCBI nr
Match: XP_008457781.1 (PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0045787.1 agamous-like MADS-box protein AGL62 [Cucumis melo var. makuwa])

HSP 1 Score: 298 bits (763), Expect = 1.16e-100
Identity = 162/183 (88.52%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60
           MKKS GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSST KIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120
           FGHPNVD LIDRFLTSNFVP KP EAYLPLEELNRDLKD TAEFE EK RAERMR TGGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDE-EMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTTSPSFHHHSVATEI 180
           WWDE EMECMGIE+LKRFRSSLMELRGKVAE+VEELAAV N+  L TSPSFHHH  AT I
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFHHH--ATTI 180

Query: 181 DDL 182
           +DL
Sbjct: 181 EDL 180

[Close]

BLAST of Chy11G187870 vs. NCBI nr
Match: TYJ99494.1 (aspartic proteinase CDR1-like [Cucumis melo var. makuwa])

HSP 1 Score: 298 bits (763), Expect = 1.56e-91
Identity = 162/183 (88.52%), Postives = 166/183 (90.71%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60
           MKKS GRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSST KIYT
Sbjct: 1   MKKSSGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTGKIYT 60

Query: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120
           FGHPNVD LIDRFLTSNFVP KP EAYLPLEELNRDLKD TAEFE EK RAERMR TGGF
Sbjct: 61  FGHPNVDMLIDRFLTSNFVPTKPAEAYLPLEELNRDLKDATAEFEIEKMRAERMRNTGGF 120

Query: 121 WWDE-EMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTTSPSFHHHSVATEI 180
           WWDE EMECMGIE+LKRFRSSLMELRGKVAE+VEELAAV N+  L TSPSFHHH  AT I
Sbjct: 121 WWDETEMECMGIEELKRFRSSLMELRGKVAEKVEELAAV-NQEVLITSPSFHHH--ATTI 180

Query: 181 DDL 182
           +DL
Sbjct: 181 EDL 180

[Close]

BLAST of Chy11G187870 vs. NCBI nr
Match: XP_038902722.1 (agamous-like MADS-box protein AGL62 [Benincasa hispida])

HSP 1 Score: 275 bits (702), Expect = 4.82e-91
Identity = 150/202 (74.26%), Postives = 161/202 (79.70%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60
           MKKSLGRQKIEIKKL VKSR+QVTFSKRRAGLFNKAAELSIL GAEIAILVFS T KIYT
Sbjct: 1   MKKSLGRQKIEIKKLEVKSRQQVTFSKRRAGLFNKAAELSILCGAEIAILVFSPTGKIYT 60

Query: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRA---ERMRKT 120
           FGHPNVD L+DR LT+NF PPKP E+YLPL ELNRD  D  AEFE EKRRA   ERMR +
Sbjct: 61  FGHPNVDLLLDRSLTANFAPPKPAESYLPLAELNRDFDDAMAEFEIEKRRAAEVERMRSS 120

Query: 121 GGFWWDEEMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTTSPSFH------ 180
           GGFWWDE +ECMGIEDLKRFRSSL+ELRGKVAERVE+LAAVRN G L  + SFH      
Sbjct: 121 GGFWWDEPVECMGIEDLKRFRSSLVELRGKVAERVEKLAAVRNGGLLMPAASFHLTGNLQ 180

Query: 181 -----------HHSVATEIDDL 182
                      +HSVATEI+DL
Sbjct: 181 CAPLPPFHLAGNHSVATEIEDL 202

[Close]

BLAST of Chy11G187870 vs. NCBI nr
Match: KAG7011020.1 (Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 224 bits (570), Expect = 5.65e-70
Identity = 116/162 (71.60%), Postives = 132/162 (81.48%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60
           MKKSLGR+KIEIKKL  KS +QVTFSKRRAGLFNKAAELS+L GAEIAILV S+T+K+YT
Sbjct: 1   MKKSLGRRKIEIKKLEKKSSQQVTFSKRRAGLFNKAAELSVLCGAEIAILVSSATNKLYT 60

Query: 61  FGHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGF 120
           FGHPNV+ L+DRFLT N  PPKP EAYLPL+ELNRD  DV AEF+ EKRRA        F
Sbjct: 61  FGHPNVESLLDRFLTGNSAPPKPAEAYLPLQELNRDFDDVAAEFDIEKRRAAERSSNDRF 120

Query: 121 WWDEEMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRG 162
           WWDE +E M I++LKRFRSSL+ELRGKVAERVE+   +R  G
Sbjct: 121 WWDEPLESMKIDELKRFRSSLVELRGKVAERVEKFTDMRTEG 162

[Close]

BLAST of Chy11G187870 vs. TAIR 10
Match: AT5G60440.1 (AGAMOUS-like 62 )

HSP 1 Score: 123.6 bits (309), Expect = 1.6e-28
Identity = 75/195 (38.46%), Postives = 112/195 (57.44%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60
           +KKS GRQKIE+ K+  +S  QVTFSKRR+GLF KA+EL  L GAE+AI+VFS   K+++
Sbjct: 2   VKKSKGRQKIEMVKMKNESNLQVTFSKRRSGLFKKASELCTLCGAEVAIVVFSPGRKVFS 61

Query: 61  FGHPNVDFLIDRFLTSNFVPP--------KPVEAYLPLEELNRDLKDVTAEFETEKRRAE 120
           FGHPNVD +IDRF+ +N +PP        +       +++LN  L  V ++ ETEK++ +
Sbjct: 62  FGHPNVDSVIDRFINNNPLPPHQHNNMQLRETRRNSIVQDLNNHLTQVLSQLETEKKKYD 121

Query: 121 RMRKTG------GFWWDEEMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTT 180
            ++K        G WW++ +E + +  L+ F+ +L  L+  V              F   
Sbjct: 122 ELKKIREKTKALGNWWEDPVEELALSQLEGFKGNLENLKKVVTVEASRFFQANVPNFYVG 181

Query: 181 SPSFHHHSVATEIDD 182
           S S   ++ A  IDD
Sbjct: 182 SSS---NNAAFGIDD 193

[Close]

BLAST of Chy11G187870 vs. TAIR 10
Match: AT2G24840.1 (AGAMOUS-like 61 )

HSP 1 Score: 104.4 bits (259), Expect = 1.0e-22
Identity = 65/159 (40.88%), Postives = 97/159 (61.01%), Query Frame = 0


Query: 2   KKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYTF 61
           K+S+GRQKI + K+  +S RQVTFSKRRAGLF KA+EL  L GAEI I+VFS   K ++F
Sbjct: 59  KESIGRQKIPMVKIKKESHRQVTFSKRRAGLFKKASELCTLCGAEIGIIVFSPAKKPFSF 118

Query: 62  GHPNVDFLIDRFLTSN---FVPPKPVEAYLPLE-ELNRDLKDVTAEFETEKR-------- 121
           GHP+V+ ++DR+++ N       + ++       ELN  L  + +E E EK+        
Sbjct: 119 GHPSVESVLDRYVSRNNMSLAQSQQLQGSPAASCELNMQLTHILSEVEEEKKKGQAMEEM 178

Query: 122 RAERMRKTGGFWWDEEMECMGIEDLKRFRSSLMELRGKV 149
           R E +R++   WW++ +E M +  L+  + +L ELR  V
Sbjct: 179 RKESVRRSMINWWEKPVEEMNMVQLQEMKYALEELRKTV 217

[Close]

BLAST of Chy11G187870 vs. TAIR 10
Match: AT1G01530.1 (AGAMOUS-like 28 )

HSP 1 Score: 98.2 bits (243), Expect = 7.4e-21
Identity = 70/181 (38.67%), Postives = 97/181 (53.59%), Query Frame = 0


Query: 2   KKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYTF 61
           +K+LGR+KIE+ K+  +S  QVTFSKRR+GLF K +EL  L  AEIAI+VFS + K Y+F
Sbjct: 3   RKNLGRRKIELVKMTNESNLQVTFSKRRSGLFKKGSELCTLCDAEIAIIVFSPSGKAYSF 62

Query: 62  GHPNVDFLIDRFL-------TSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKR----- 121
           GHPNV+ L+D  L        +NF   +     L ++ LN  L +V AE E E+      
Sbjct: 63  GHPNVNKLLDHSLGRVIRHNNTNFAESR---TKLRIQMLNESLTEVMAEKEKEQETKQSI 122

Query: 122 -RAERMRKTGGFWWDEEMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTTSP 170
            + ER  K    WW      + +      +  L  L+ +V E+V +L   RN  F   S 
Sbjct: 123 VQNERENKDAEKWWRNSPTELNLAQSTSMKCDLEALKKEVDEKVAQLHH-RNLNFYVGSS 179

[Close]

BLAST of Chy11G187870 vs. TAIR 10
Match: AT1G17310.1 (MADS-box transcription factor family protein )

HSP 1 Score: 97.4 bits (241), Expect = 1.3e-20
Identity = 60/151 (39.74%), Postives = 91/151 (60.26%), Query Frame = 0


Query: 2   KKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYTF 61
           K + GRQKIEIKK+  +++RQVTFSKRR GLF K+AELS+L+GA+IA++ FS  D+IY F
Sbjct: 44  KTTRGRQKIEIKKIEEETKRQVTFSKRRRGLFKKSAELSVLTGAKIAVITFSKCDRIYRF 103

Query: 62  GHPNVDFLIDRFLTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKRRAERMRKTGGFW 121
           GH  VD LID++L  +   P  +E Y           D  A+ E+ +            W
Sbjct: 104 GH--VDALIDKYLRKS---PVKLEGY---------SGDNAADEESRRP-----------W 163

Query: 122 WDEEMECMGIEDLKRFRSSLMELRGKVAERV 153
           W+  +E +  E+L+ + ++L  LR  + +++
Sbjct: 164 WERPVESVPEEELEEYMAALSMLRENIGKKI 169

[Close]

BLAST of Chy11G187870 vs. TAIR 10
Match: AT1G65360.1 (AGAMOUS-like 23 )

HSP 1 Score: 95.1 bits (235), Expect = 6.3e-20
Identity = 64/179 (35.75%), Postives = 95/179 (53.07%), Query Frame = 0


Query: 1   MKKSLGRQKIEIKKLNVKSRRQVTFSKRRAGLFNKAAELSILSGAEIAILVFSSTDKIYT 60
           +KK+LGR+K+EI K+  +S  QVTFSKR+AGLF KA+E   L  A+IA++VFS   K+++
Sbjct: 2   VKKTLGRRKVEIVKMTKESNLQVTFSKRKAGLFKKASEFCTLCDAKIAMIVFSPAGKVFS 61

Query: 61  FGHPNVDFLIDRF----LTSNFVPPKPVEAYLPLEELNRDLKDVTAEFETEKR------R 120
           FGHPNVD L+D F    +  N          L ++ LN+   +V AE E E++      +
Sbjct: 62  FGHPNVDVLLDHFRGCVVGHNNTNLDESYTKLHVQMLNKSYTEVKAEVEKEQKNKQSRAQ 121

Query: 121 AERMRKTGGFWWDEEMECMGIEDLKRFRSSLMELRGKVAERVEELAAVRNRGFLTTSPS 170
            ER  +    WW +    + +         L +L+  V E+  +L    N  F   S S
Sbjct: 122 NERENENAEEWWSKSPLELNLSQSTCMIRVLKDLKKIVDEKAIQLIHQTNPNFYVGSSS 180

The following BLAST results are available for this feature:

BLAST of Chy11G187870 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKK2	2.3e-27	38.46	Agamous-like MADS-box protein AGL62 OS=Arabidopsis thaliana OX=3702 GN=AGL62 PE=...	[more]
Q4PSU4	1.5e-21	40.88	Agamous-like MADS-box protein AGL61 OS=Arabidopsis thaliana OX=3702 GN=AGL61 PE=...	[more]
Q9LMM8	1.0e-19	38.67	Agamous-like MADS-box protein AGL28 OS=Arabidopsis thaliana OX=3702 GN=AGL28 PE=...	[more]
O80807	8.8e-19	35.75	Agamous-like MADS-box protein AGL23 OS=Arabidopsis thaliana OX=3702 GN=AGL23 PE=...	[more]
O64703	5.4e-16	33.95	Agamous-like MADS-box protein AGL29 OS=Arabidopsis thaliana OX=3702 GN=AGL29 PE=...	[more]

BLAST of Chy11G187870 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LLS2	1.5e-93	97.85	Mads box protein OS=Cucumis sativus OX=3659 GN=Csa_2G277060 PE=4 SV=1	[more]
A0A5D3BKF4	5.1e-78	88.52	Aspartic proteinase CDR1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]
A0A5A7TV93	5.1e-78	88.52	Agamous-like MADS-box protein AGL62 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S3C5V9	5.1e-78	88.52	agamous-like MADS-box protein AGL62 OS=Cucumis melo OX=3656 GN=LOC103497390 PE=4...	[more]
A0A6J1FUA9	2.1e-55	71.60	agamous-like MADS-box protein AGL61 OS=Cucurbita moschata OX=3662 GN=LOC11144885...	[more]

BLAST of Chy11G187870 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149713.1	4.71e-121	97.85	agamous-like MADS-box protein AGL62 [Cucumis sativus] >KGN61964.1 hypothetical p...	[more]
XP_008457781.1	1.16e-100	88.52	PREDICTED: agamous-like MADS-box protein AGL62 [Cucumis melo] >KAA0045787.1 agam...	[more]
TYJ99494.1	1.56e-91	88.52	aspartic proteinase CDR1-like [Cucumis melo var. makuwa]	[more]
XP_038902722.1	4.82e-91	74.26	agamous-like MADS-box protein AGL62 [Benincasa hispida]	[more]
KAG7011020.1	5.65e-70	71.60	Agamous-like MADS-box protein AGL62, partial [Cucurbita argyrosperma subsp. argy...	[more]

BLAST of Chy11G187870 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60440.1	1.6e-28	38.46	AGAMOUS-like 62	[more]
AT2G24840.1	1.0e-22	40.88	AGAMOUS-like 61	[more]
AT1G01530.1	7.4e-21	38.67	AGAMOUS-like 28	[more]
AT1G17310.1	1.3e-20	39.74	MADS-box transcription factor family protein	[more]
AT1G65360.1	6.3e-20	35.75	AGAMOUS-like 23	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 90..117
None	No IPR available	PANTHER	PTHR11945:SF618	AGAMOUS-LIKE MADS-BOX PROTEIN AGL61	coord: 5..155
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 5..155
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 42..63 score: 36.72 coord: 27..42 score: 65.84 coord: 7..27 score: 51.63
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 5..64 e-value: 1.4E-28 score: 111.0
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 18..61 e-value: 1.2E-20 score: 72.8
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 5..65 score: 25.314814
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 18..80 e-value: 7.6E-25 score: 88.6
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 5..77

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G187870.1	Chy11G187870.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006508	proteolysis
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding