Chy11G187640 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCGTATCACTTTGTTTTGTCACAATAAAGTTAGTGTACTAAAAGTTTCCGGTCAACCCACACTCTCTTTCTTTGGTGAATTGTGCAAAATACAAGGTTAGAATCTTAATAGATCATGTTTTTTTTTCATTATCATTGTGGACTCCAAGCATTAGTATAGTACCAAGTCTATGACACTTATGTCTAAGTTAGTATAAGGAATGTGTAGTTTAACTAAGCATACAAAAAGTAGTCTAGAGCTCTCCTTTTTTAAGATTACTTATTTTTCTTTTTGGAGATCATCGAATGAGGTTATTATTTTTCCTTTTATGAGACTTGATTATGACTGACATGTAACCTTGACGATATTAGGGTTGCTTTCGACGCTCAAGATTGCAGGGTAACTAGACTAAACGTAGCTCTATTGACTATGATTAGTCAGCCCCCTTGAGATATTGACTTTTCCATTCTAGGCCATGTATTCCTCTATACCTTATCTCGGTACCCTATGGGATATGGGCCTGTCTATAGATTTTGACCTTGTCGTAGGCAACCTTAAAAAAAAGATTGAACTTTATAAATATACTATTTTCATTCACTAATTTCTTTGGTTCATGGTCTATTGATTAGTGAAAAATGTTCAAGTTTTATCATATATATTATACTACTTTTCTCTAGCCAAAGAGTCATTTCATATGATGTTTTGATCCCACGTTGAACTAAAACGAGTCAAATGAGCAAACAATATATCATTAATTAAACAATAATTTACACCATAAATTAGCAACCCAAATACAACCCCTAACTAGGAGTTTGGGGTTTATAAATAATTAGTAATCCAAAAACAACTCCTAATTATAATATGTTAGAGTTTGTAAAACTCAACATCTTATAATAATCATAAAATAAAAAGTTTTATCAAGTTAATAAATTAGCTATCCAAATACAACTCATAAACTCAACCAAAAATAATTTGCATCATAAACACAAACCTTCCACAATACATATCTAAAACAATTTGCACCTAAAAAACAAACTATTTGAACCATTCCTATAATATCGTATAATGCAAATATATACACACTACTCAACTCCATAAACTATGATAGTCTCACAAACTCTAATAACAACAAACTATATTATAACCAACCATAAATGTACTCCAAACAACCTTTCAAGGAAATAAAAATATATACATTTTTTAAATTAAGTTATAATAAAAGGAAATTGAGAGAGAATAGTACATTTTTTTTACTACAACAACCATTGGGATGTGGAATTAAACCCCAACATCAAAGAATATTATAAGTCATGCCAAGCTAAACTTAATTTGAGAGGATGTAGATTGAAAACATATTAATTTGATACACACACTTTTAAGTACAATTGTGTAACATTTTATAATTTGATAAAACCCCTCCAAAAGTTGACCTCAAAACCATTATAAACCGTTCAAATCAAAGTATCATTGGGAATCATTAGTTTATTCATTATTGAATGAGAACCCTCCATTTTTAGGCATCGCTATTAACCCTATAAATTCCACCACCAAATCATCACTTTCTCCTCACTCAACAAAACCATCCTTCCATTTCATAAACCCTAAATTTTCTCTTCCTTAAAATAGAAAAAAAGAAAAAAGCCCTTTCTCAAATGGGAAATTACCATTTTCAAACCATGTGCCAATGTGCTATTCTTCTACTTACCATCTTCATAGCCTTTGGAACTTATCAAATCCAAGGAAGGCCTTTGAAACCTCTTACTTCATCTCATATTCCTTCCCACTCCTCTCTCGGTGACGGTTTTGGGGAGTCCAACGTTGGTAGCAAAGACGATTTTCGCCCTACAACGCCTGGAAACAGCCCTGGAGTTGGCCACCATTCGGTTCGAAGAAGTGGCACCATGGCTGCCATTGCTTCTGATGACCGAGCAGTGCACAATACAGAAGGGTTGAAGGATGATTTCCGACCAACGGCACCGGGACATAGCCCTGGCATCGGTCATGTTCAGCATCACATTGCTTCCAAACCAAATGCTTAA ATGCGTATCACTTTGTTTTGTCACAATAAAGTTAGTGTACTAAAAGTTTCCGGTCAACCCACACTCTCTTTCTTTGGTGAATTGTGCAAAATACAAGCCTTTGGAACTTATCAAATCCAAGGAAGGCCTTTGAAACCTCTTACTTCATCTCATATTCCTTCCCACTCCTCTCTCGGTGACGGTTTTGGGGAGTCCAACGTTGGTAGCAAAGACGATTTTCGCCCTACAACGCCTGGAAACAGCCCTGGAGTTGGCCACCATTCGGTTCGAAGAAGTGGCACCATGGCTGCCATTGCTTCTGATGACCGAGCAGTGCACAATACAGAAGGGTTGAAGGATGATTTCCGACCAACGGCACCGGGACATAGCCCTGGCATCGGTCATGTTCAGCATCACATTGCTTCCAAACCAAATGCTTAA ATGCGTATCACTTTGTTTTGTCACAATAAAGTTAGTGTACTAAAAGTTTCCGGTCAACCCACACTCTCTTTCTTTGGTGAATTGTGCAAAATACAAGCCTTTGGAACTTATCAAATCCAAGGAAGGCCTTTGAAACCTCTTACTTCATCTCATATTCCTTCCCACTCCTCTCTCGGTGACGGTTTTGGGGAGTCCAACGTTGGTAGCAAAGACGATTTTCGCCCTACAACGCCTGGAAACAGCCCTGGAGTTGGCCACCATTCGGTTCGAAGAAGTGGCACCATGGCTGCCATTGCTTCTGATGACCGAGCAGTGCACAATACAGAAGGGTTGAAGGATGATTTCCGACCAACGGCACCGGGACATAGCCCTGGCATCGGTCATGTTCAGCATCACATTGCTTCCAAACCAAATGCTTAA MRITLFCHNKVSVLKVSGQPTLSFFGELCKIQAFGTYQIQGRPLKPLTSSHIPSHSSLGDGFGESNVGSKDDFRPTTPGNSPGVGHHSVRRSGTMAAIASDDRAVHNTEGLKDDFRPTAPGHSPGIGHVQHHIASKPNA* Homology
BLAST of Chy11G187640 vs. ExPASy Swiss-Prot
Match: B3H5A9 (Precursor of CEP6 OS=Arabidopsis thaliana OX=3702 GN=CEP6 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 4.3e-10 Identity = 34/73 (46.58%), Postives = 40/73 (54.79%), Query Frame = 0
BLAST of Chy11G187640 vs. ExPASy Swiss-Prot
Match: A0A1I9LMX5 (Precursor of CEP9 OS=Arabidopsis thaliana OX=3702 GN=CEP9 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08 Identity = 34/79 (43.04%), Postives = 43/79 (54.43%), Query Frame = 0
BLAST of Chy11G187640 vs. ExPASy Swiss-Prot
Match: Q9SKW7 (Precursor of CEP10 OS=Arabidopsis thaliana OX=3702 GN=CEP10 PE=3 SV=2) HSP 1 Score: 46.2 bits (108), Expect = 3.5e-04 Identity = 24/60 (40.00%), Postives = 32/60 (53.33%), Query Frame = 0
BLAST of Chy11G187640 vs. ExPASy TrEMBL
Match: A0A0A0LMN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285370 PE=3 SV=1) HSP 1 Score: 212.6 bits (540), Expect = 1.0e-51 Identity = 101/107 (94.39%), Postives = 103/107 (96.26%), Query Frame = 0
BLAST of Chy11G187640 vs. ExPASy TrEMBL
Match: A0A5A7TR16 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00110 PE=3 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.8e-49 Identity = 98/107 (91.59%), Postives = 102/107 (95.33%), Query Frame = 0
BLAST of Chy11G187640 vs. ExPASy TrEMBL
Match: A0A1S3C7Z6 (uncharacterized protein LOC103497520 OS=Cucumis melo OX=3656 GN=LOC103497520 PE=3 SV=1) HSP 1 Score: 204.5 bits (519), Expect = 2.8e-49 Identity = 98/107 (91.59%), Postives = 102/107 (95.33%), Query Frame = 0
BLAST of Chy11G187640 vs. ExPASy TrEMBL
Match: A0A438KJP7 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_001818 PE=3 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 5.1e-14 Identity = 46/97 (47.42%), Postives = 59/97 (60.82%), Query Frame = 0
BLAST of Chy11G187640 vs. ExPASy TrEMBL
Match: A0A438F583 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=CK203_066883 PE=3 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 5.1e-14 Identity = 46/97 (47.42%), Postives = 59/97 (60.82%), Query Frame = 0
BLAST of Chy11G187640 vs. NCBI nr
Match: KAE8651918.1 (hypothetical protein Csa_006213 [Cucumis sativus]) HSP 1 Score: 213 bits (543), Expect = 5.45e-69 Identity = 101/107 (94.39%), Postives = 103/107 (96.26%), Query Frame = 0
BLAST of Chy11G187640 vs. NCBI nr
Match: XP_011650158.1 (precursor of CEP9 [Cucumis sativus]) HSP 1 Score: 213 bits (543), Expect = 8.33e-69 Identity = 101/107 (94.39%), Postives = 103/107 (96.26%), Query Frame = 0
BLAST of Chy11G187640 vs. NCBI nr
Match: XP_008457955.1 (PREDICTED: uncharacterized protein LOC103497520 [Cucumis melo] >KAA0045832.1 uncharacterized protein E6C27_scaffold243G003610 [Cucumis melo var. makuwa] >TYJ99451.1 uncharacterized protein E5676_scaffold123G00110 [Cucumis melo var. makuwa]) HSP 1 Score: 205 bits (522), Expect = 1.32e-65 Identity = 98/107 (91.59%), Postives = 102/107 (95.33%), Query Frame = 0
BLAST of Chy11G187640 vs. NCBI nr
Match: KAG6571310.1 (Precursor of CEP6, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 123 bits (309), Expect = 2.14e-33 Identity = 66/106 (62.26%), Postives = 72/106 (67.92%), Query Frame = 0
BLAST of Chy11G187640 vs. NCBI nr
Match: KAG7019315.1 (Precursor of CEP6, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 122 bits (306), Expect = 6.09e-33 Identity = 66/106 (62.26%), Postives = 72/106 (67.92%), Query Frame = 0
BLAST of Chy11G187640 vs. TAIR 10
Match: AT5G66816.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G50610.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 65.9 bits (159), Expect = 3.0e-11 Identity = 34/73 (46.58%), Postives = 40/73 (54.79%), Query Frame = 0
BLAST of Chy11G187640 vs. TAIR 10
Match: AT3G50610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G66816.1); Has 125 Blast hits to 60 proteins in 16 species: Archae - 0; Bacteria - 2; Metazoa - 10; Fungi - 4; Plants - 97; Viruses - 0; Other Eukaryotes - 12 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 9.8e-10 Identity = 34/79 (43.04%), Postives = 43/79 (54.43%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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