Chy11G187280 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G187280
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	UDP-N-acetylmuramoyl-L-alanyl-D-glutamate-2, 6-diaminopimelate ligase
Location	chrH11: 1500665 .. 1502486 (-)
RNA-Seq Expression	Chy11G187280
Synteny	Chy11G187280

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGACAGAGAAGAAACCGATTCGGACGCTCCCGAGGAGTTCACCGCCGAGCAGGTTGCTTGTTTTTAACTTTATGTACTTCTCTTTGCTTCTTGTCAATGGCTCCTTAACGATTCGGAACTTTTTTTTTTGTTGTTGCAGGGAGTACAACAGGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCTAGGTGTGTATTCAATCCGCATTTCCCTTTAGTATATTGTATTTGATGTCGAATCTTGTGTTTTCGTTGTTCTTTCATTGATGATTTTACTGAGCTGTCTTTTGTAATATTTGATTATCCGTTTTGTTGGTTCTATTTGAAGTTGTTTCTTTGAAGTGATTTGCCTGCTTTTAGGGTTGTGGAGAATATAGAGGAGTTTCTTCTTCAATTGTCGTTTTTATATAAAAAAGGATTGTTTTTGTGTAAGGTTGCGGTATGCTATTATGTTGGTCTTTGTGGTGAGAGGAATACGGGAGAATCAATAGAGGATTAAGGGAGTTCTTCTAGCGATATTTGGTCCCTTATTAGATTCAATGTTTCCTTTTGGGTGTTGGTAATTAGGCCTTTTTTGTAATGATTTTGTACGCCTTATTTTACTAAATTGGAGCTCCTTTTTGTAGTTTGAGTATATCTCATTTGTGGGTTTTATTTTTGTATGCCATTGCATTCTACCATTTTTCTCGTGCGACCTTCAATTATTCTTAAAGAGGCAACAAGTTGTTGGCCATGGCCTGCTAATGATATGTTTATAAAATTGAAGTGGAGTGGTAATGGGGAGTAAGGTGGATACAAATTGACTTGAACATTGATTACCTTCTTTTGCTCTGCTCTTATTAGTTCATTAGTTTTATGTATTCTTTCGGCCCTTGGTATATTTTGGCCTTGGGCAGTTCAGACGTTTCCTTAATGGGCTGTCTTCTCTTTTTTCATAGTTTGAATTAATAAGAATCAAACTTTTTGGCCACACCTGATATGATAATTTTCTTTAATTGAAAACACACGAGGATCATGGCAAGGATCAACGTACTGCACATTGCCAGTAGTTGCCTAGGATGGCTTATTGTGTCATGTCCATTGCTCTGGGGTGGACAATTGTTGTTCGTTCTCAGAATCCAATCTACTTGGAATTCTTACCAGCCCGATATCCTAAACATTTGTGTCTGGTTATTGTGTTATTTTAACCATATGTAACCTTATATTTTGTAGGGTTATTCGTGAAGGAAAAGAACGTCGTAGACTATGGGCTGAAAAGAAAACACCACGCCCATCTAAAAAGGGTGAAATCGTTGAAGATTTAGCAGAACCCCCTGGAAATGACGGCAAAATTAGCAAGTTGGGAACACTTCCTAGTAATATCGTCCAACTGCTTGTAGACCGTGAGAAGTATGTCTCTTCTCCTCTATTCATGTATTGCTGTGTAGATCATGATTTTGCCAAGTGACTAATATGGTATTCTCTCCATCTATAGACAAGTTTTCTCGTCAGATCCGGGCGATGAAAAGCCAGCAATTAAACCAAAACAAAAGAGGAAGAAGACCAAAAGCTCCGGGTAAGGGACCAGACCTGATTTAGAATGTCACACCTATTAATTTTAATGTACTTTCTGATTTAGAATGGTCTCTTATTTATTTTAATGCAGGATTGAAACGGTTCTTTTAAATGAAAGAACACCATCTCATTGTTTACAGAACTCCTTGGAATTTTTGAAGAAAAGGAAGATGAATGTTGCAAGATCATCAACGGTTCTCAACAATCCTAACCAAGCGTTCCGGCTACTTTCTTCATCTGGCTTATTAACGAAGAAATAG

mRNA sequence

ATGTCGGACAGAGAAGAAACCGATTCGGACGCTCCCGAGGAGTTCACCGCCGAGCAGGGAGTACAACAGGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCTAGGGTTATTCGTGAAGGAAAAGAACGTCGTAGACTATGGGCTGAAAAGAAAACACCACGCCCATCTAAAAAGGGTGAAATCGTTGAAGATTTAGCAGAACCCCCTGGAAATGACGGCAAAATTAGCAAGTTGGGAACACTTCCTAGTAATATCGTCCAACTGCTTGTAGACCGTGAGAAACAAGTTTTCTCGTCAGATCCGGGCGATGAAAAGCCAGCAATTAAACCAAAACAAAAGAGGAAGAAGACCAAAAGCTCCGGGATTGAAACGGTTCTTTTAAATGAAAGAACACCATCTCATTGTTTACAGAACTCCTTGGAATTTTTGAAGAAAAGGAAGATGAATGTTGCAAGATCATCAACGGTTCTCAACAATCCTAACCAAGCGTTCCGGCTACTTTCTTCATCTGGCTTATTAACGAAGAAATAG

Coding sequence (CDS)

ATGTCGGACAGAGAAGAAACCGATTCGGACGCTCCCGAGGAGTTCACCGCCGAGCAGGGAGTACAACAGGATGAAGAGATTAGAAAAGTTCAAAAAGAAAGTAAGGCTAGGGTTATTCGTGAAGGAAAAGAACGTCGTAGACTATGGGCTGAAAAGAAAACACCACGCCCATCTAAAAAGGGTGAAATCGTTGAAGATTTAGCAGAACCCCCTGGAAATGACGGCAAAATTAGCAAGTTGGGAACACTTCCTAGTAATATCGTCCAACTGCTTGTAGACCGTGAGAAACAAGTTTTCTCGTCAGATCCGGGCGATGAAAAGCCAGCAATTAAACCAAAACAAAAGAGGAAGAAGACCAAAAGCTCCGGGATTGAAACGGTTCTTTTAAATGAAAGAACACCATCTCATTGTTTACAGAACTCCTTGGAATTTTTGAAGAAAAGGAAGATGAATGTTGCAAGATCATCAACGGTTCTCAACAATCCTAACCAAGCGTTCCGGCTACTTTCTTCATCTGGCTTATTAACGAAGAAATAG

Protein sequence

MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKKGEIVEDLAEPPGNDGKISKLGTLPSNIVQLLVDREKQVFSSDPGDEKPAIKPKQKRKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK*

Homology

[Close]

BLAST of Chy11G187280 vs. ExPASy TrEMBL
Match: A0A0A0LM07 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292200 PE=4 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.6e-84
Identity = 174/178 (97.75%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPPGNDGKISKLGTLPSNIVQLLVDREKQVFSSDPGDEKPAIKPKQKRKKTK 120
           GEIVEDLAEPP ND KISKLGTLPSNIVQLLVDREKQVFSSD GDEKPAIKPKQKRKKTK
Sbjct: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120

Query: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 179
           SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVL+NPNQAFRLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 178

[Close]

BLAST of Chy11G187280 vs. ExPASy TrEMBL
Match: A0A5A7TWK6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002660 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.3e-82
Identity = 171/179 (95.53%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSDREETDSDAPEEFTAEQGVQQDEEIRKVQ ESKARVIREGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQNESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPPGNDGKISKLGTLPSNIVQLLVDREKQVFSSDPGDEKPAIKPKQKRKKTK 120
           GEIVEDLAEPP ND K+SKLGTLPSN+VQLLVDREKQVFSSD GDEKPAIKPKQKRKKTK
Sbjct: 61  GEIVEDLAEPPRNDDKVSKLGTLPSNVVQLLVDREKQVFSSDLGDEKPAIKPKQKRKKTK 120

Query: 121 -SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 179
            SSGIETVLL+ERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK
Sbjct: 121 SSSGIETVLLSERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 179

[Close]

BLAST of Chy11G187280 vs. ExPASy TrEMBL
Match: A0A1S3C749 (uncharacterized protein LOC103497440 OS=Cucumis melo OX=3656 GN=LOC103497440 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.3e-82
Identity = 171/179 (95.53%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSDREETDSDAPEEFTAEQGVQQDEEIRKVQ ESKARVIREGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQNESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPPGNDGKISKLGTLPSNIVQLLVDREKQVFSSDPGDEKPAIKPKQKRKKTK 120
           GEIVEDLAEPP ND K+SKLGTLPSN+VQLLVDREKQVFSSD GDEKPAIKPKQKRKKTK
Sbjct: 61  GEIVEDLAEPPRNDDKVSKLGTLPSNVVQLLVDREKQVFSSDLGDEKPAIKPKQKRKKTK 120

Query: 121 -SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 179
            SSGIETVLL+ERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK
Sbjct: 121 SSSGIETVLLSERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 179

[Close]

BLAST of Chy11G187280 vs. ExPASy TrEMBL
Match: A0A6J1DXW1 (uncharacterized protein LOC111025162 OS=Momordica charantia OX=3673 GN=LOC111025162 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 5.4e-69
Identity = 144/177 (81.36%), Postives = 159/177 (89.83%), Query Frame = 0


Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSD E+TDSDAPEEFTAEQG+QQD+EI KVQ ESKARV+REGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDGEDTDSDAPEEFTAEQGIQQDQEITKVQNESKARVVREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPPGNDGKISKLGTLPSNIVQLLVDREKQVFSSDPGDEKPAIKPKQKRKKTK 120
           GE VED+AE P +  + SKLG LPSN+VQLL DREKQVFSSDPGDEKPA KPK KRKKTK
Sbjct: 61  GETVEDVAEIPSHIDQSSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAAKPKTKRKKTK 120

Query: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTK 178
           SSGIETV+LN+R P+ CLQNS+EFLKKRKMN+ RSS+VL+NPNQA R LSSSGLLTK
Sbjct: 121 SSGIETVVLNKRQPAQCLQNSMEFLKKRKMNIPRSSSVLDNPNQALRRLSSSGLLTK 177

[Close]

BLAST of Chy11G187280 vs. ExPASy TrEMBL
Match: A0A6J1G7P4 (uncharacterized protein LOC111451498 OS=Cucurbita moschata OX=3662 GN=LOC111451498 PE=4 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 3.5e-68
Identity = 144/178 (80.90%), Postives = 158/178 (88.76%), Query Frame = 0


Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQKES ARV+REGKERRR WAEKKTPR SKK
Sbjct: 1   MSDPNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60

Query: 61  GEIVEDLAEPPGNDGKISKLGTLPSNIVQLLVDREKQVFSSDPGDEKPAIKPKQKRKKTK 120
            E VED+AE P ++ ++SKLG LPSN+VQLL +REKQVFSSDPGDEKPA K K KRKK+K
Sbjct: 61  SETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120

Query: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 179
           SSGIETVLLNER PS CLQNSLEFLKKRKMN+ RSS+VL+N NQA RLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]

BLAST of Chy11G187280 vs. NCBI nr
Match: XP_004148046.1 (uncharacterized protein LOC101208336 [Cucumis sativus] >KGN62039.1 hypothetical protein Csa_006734 [Cucumis sativus])

HSP 1 Score: 324 bits (830), Expect = 3.91e-111
Identity = 174/178 (97.75%), Postives = 175/178 (98.31%), Query Frame = 0


Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPPGNDGKISKLGTLPSNIVQLLVDREKQVFSSDPGDEKPAIKPKQKRKKTK 120
           GEIVEDLAEPP ND KISKLGTLPSNIVQLLVDREKQVFSSD GDEKPAIKPKQKRKKTK
Sbjct: 61  GEIVEDLAEPPRNDDKISKLGTLPSNIVQLLVDREKQVFSSDSGDEKPAIKPKQKRKKTK 120

Query: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 178
           SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVL+NPNQAFRLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLSNPNQAFRLLSSSGLLTKK 178

[Close]

BLAST of Chy11G187280 vs. NCBI nr
Match: XP_008457855.1 (PREDICTED: uncharacterized protein LOC103497440 [Cucumis melo] >KAA0045851.1 uncharacterized protein E6C27_scaffold243G003840 [Cucumis melo var. makuwa] >TYK13737.1 uncharacterized protein E5676_scaffold299G002660 [Cucumis melo var. makuwa])

HSP 1 Score: 316 bits (809), Expect = 6.43e-108
Identity = 171/179 (95.53%), Postives = 174/179 (97.21%), Query Frame = 0


Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSDREETDSDAPEEFTAEQGVQQDEEIRKVQ ESKARVIREGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQNESKARVIREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPPGNDGKISKLGTLPSNIVQLLVDREKQVFSSDPGDEKPAIKPKQKRKKTK 120
           GEIVEDLAEPP ND K+SKLGTLPSN+VQLLVDREKQVFSSD GDEKPAIKPKQKRKKTK
Sbjct: 61  GEIVEDLAEPPRNDDKVSKLGTLPSNVVQLLVDREKQVFSSDLGDEKPAIKPKQKRKKTK 120

Query: 121 SS-GIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 178
           SS GIETVLL+ERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK
Sbjct: 121 SSSGIETVLLSERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 179

[Close]

BLAST of Chy11G187280 vs. NCBI nr
Match: XP_038901892.1 (uncharacterized protein LOC120088571 [Benincasa hispida])

HSP 1 Score: 290 bits (743), Expect = 7.36e-98
Identity = 157/179 (87.71%), Postives = 166/179 (92.74%), Query Frame = 0


Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSDRE+TDSDAPEEFTAEQGVQQDEEIRKVQKESKARV+REGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDREDTDSDAPEEFTAEQGVQQDEEIRKVQKESKARVVREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPP-GNDGKISKLGTLPSNIVQLLVDREKQVFSSDPGDEKPAIKPKQKRKKT 120
           GE VEDLAEPP  +  +ISKLG LPSNIVQLLVDREKQVFSSDP DEKPAIKPK KRKKT
Sbjct: 61  GETVEDLAEPPRDHHDQISKLGMLPSNIVQLLVDREKQVFSSDPSDEKPAIKPKSKRKKT 120

Query: 121 KSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 178
           KSSGIETVLL+ERTPS CL NSLEFLKKRKMN+ RSS+VL+NPNQA RLLS+SGLL KK
Sbjct: 121 KSSGIETVLLSERTPSQCLHNSLEFLKKRKMNITRSSSVLDNPNQALRLLSTSGLLIKK 179

[Close]

BLAST of Chy11G187280 vs. NCBI nr
Match: KAG7035221.1 (hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 272 bits (696), Expect = 1.03e-90
Identity = 145/178 (81.46%), Postives = 159/178 (89.33%), Query Frame = 0


Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSD  +TDSDAPEEFTAEQG+QQDEEIRKVQKES ARV+REGKERRR WAEKKTPR SKK
Sbjct: 1   MSDSNDTDSDAPEEFTAEQGIQQDEEIRKVQKESSARVVREGKERRRQWAEKKTPRASKK 60

Query: 61  GEIVEDLAEPPGNDGKISKLGTLPSNIVQLLVDREKQVFSSDPGDEKPAIKPKQKRKKTK 120
           GE VED+AE P ++ ++SKLG LPSN+VQLL +REKQVFSSDPGDEKPA K K KRKK+K
Sbjct: 61  GETVEDVAETPRHNDQVSKLGMLPSNLVQLLAEREKQVFSSDPGDEKPAAKSKTKRKKSK 120

Query: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTKK 178
           SSGIETVLLNER PS CLQNSLEFLKKRKMN+ RSS+VL+N NQA RLLSSSGLLTKK
Sbjct: 121 SSGIETVLLNERAPSQCLQNSLEFLKKRKMNIPRSSSVLDNSNQALRLLSSSGLLTKK 178

[Close]

BLAST of Chy11G187280 vs. NCBI nr
Match: XP_022158697.1 (uncharacterized protein LOC111025162 [Momordica charantia])

HSP 1 Score: 272 bits (696), Expect = 1.03e-90
Identity = 144/177 (81.36%), Postives = 159/177 (89.83%), Query Frame = 0


Query: 1   MSDREETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPSKK 60
           MSD E+TDSDAPEEFTAEQG+QQD+EI KVQ ESKARV+REGKERRRLWAEKKTPRPSKK
Sbjct: 1   MSDGEDTDSDAPEEFTAEQGIQQDQEITKVQNESKARVVREGKERRRLWAEKKTPRPSKK 60

Query: 61  GEIVEDLAEPPGNDGKISKLGTLPSNIVQLLVDREKQVFSSDPGDEKPAIKPKQKRKKTK 120
           GE VED+AE P +  + SKLG LPSN+VQLL DREKQVFSSDPGDEKPA KPK KRKKTK
Sbjct: 61  GETVEDVAEIPSHIDQSSKLGMLPSNLVQLLADREKQVFSSDPGDEKPAAKPKTKRKKTK 120

Query: 121 SSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLLTK 177
           SSGIETV+LN+R P+ CLQNS+EFLKKRKMN+ RSS+VL+NPNQA R LSSSGLLTK
Sbjct: 121 SSGIETVVLNKRQPAQCLQNSMEFLKKRKMNIPRSSSVLDNPNQALRRLSSSGLLTK 177

[Close]

BLAST of Chy11G187280 vs. TAIR 10
Match: AT4G37090.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 126.7 bits (317), Expect = 1.9e-29
Identity = 83/183 (45.36%), Postives = 115/183 (62.84%), Query Frame = 0


Query: 1   MSDRE--ETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPS 60
           MSD +  ++DSDAPEE T EQ   ++E + K+Q+E+K RV RE KERR+L AE+ T R S
Sbjct: 1   MSDNKDRDSDSDAPEELTQEQAKLEEEALWKIQRENKNRVSREKKERRKLMAEQVTLRKS 60

Query: 61  KKGEIVEDLA---EPPGNDGKISKLGTLPSNIVQLLVDREKQVFSSDPGDEKPAIKPKQK 120
           +K EI+ED+    EP  N   ++  G L  +I+  L +REKQ   SD  +E+  I    +
Sbjct: 61  RKIEIIEDVVEEEEPEENSEALANKGFLSKDIIDFLAEREKQKAESD-SEEEEIIDELPR 120

Query: 121 RKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLL 179
           +KK KSSGIETV+  E  P  CL+  L+FLK R+  V RSS+V+ N  QA RL + + L 
Sbjct: 121 KKKQKSSGIETVIYKEIPPPECLKTGLDFLKMRRAQVPRSSSVIKNSGQALRLATGAALA 180

[Close]

BLAST of Chy11G187280 vs. TAIR 10
Match: AT4G37090.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 122.1 bits (305), Expect = 4.6e-28
Identity = 83/183 (45.36%), Postives = 115/183 (62.84%), Query Frame = 0


Query: 1   MSDRE--ETDSDAPEEFTAEQGVQQDEEIRKVQKESKARVIREGKERRRLWAEKKTPRPS 60
           MSD +  ++DSDAPEE T EQ   ++E + K+Q+E+K RV RE KERR+L AE+ T R S
Sbjct: 1   MSDNKDRDSDSDAPEELTQEQ--LEEEALWKIQRENKNRVSREKKERRKLMAEQVTLRKS 60

Query: 61  KKGEIVEDLA---EPPGNDGKISKLGTLPSNIVQLLVDREKQVFSSDPGDEKPAIKPKQK 120
           +K EI+ED+    EP  N   ++  G L  +I+  L +REKQ   SD  +E+  I    +
Sbjct: 61  RKIEIIEDVVEEEEPEENSEALANKGFLSKDIIDFLAEREKQKAESD-SEEEEIIDELPR 120

Query: 121 RKKTKSSGIETVLLNERTPSHCLQNSLEFLKKRKMNVARSSTVLNNPNQAFRLLSSSGLL 179
           +KK KSSGIETV+  E  P  CL+  L+FLK R+  V RSS+V+ N  QA RL + + L 
Sbjct: 121 KKKQKSSGIETVIYKEIPPPECLKTGLDFLKMRRAQVPRSSSVIKNSGQALRLATGAALA 180

The following BLAST results are available for this feature:

BLAST of Chy11G187280 vs.


Match Name	E-value	Identity	Description

BLAST of Chy11G187280 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM07	1.6e-84	97.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G292200 PE=4 SV=1	[more]
A0A5A7TWK6	4.3e-82	95.53	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3C749	4.3e-82	95.53	uncharacterized protein LOC103497440 OS=Cucumis melo OX=3656 GN=LOC103497440 PE=...	[more]
A0A6J1DXW1	5.4e-69	81.36	uncharacterized protein LOC111025162 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]
A0A6J1G7P4	3.5e-68	80.90	uncharacterized protein LOC111451498 OS=Cucurbita moschata OX=3662 GN=LOC1114514...	[more]

BLAST of Chy11G187280 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148046.1	3.91e-111	97.75	uncharacterized protein LOC101208336 [Cucumis sativus] >KGN62039.1 hypothetical ...	[more]
XP_008457855.1	6.43e-108	95.53	PREDICTED: uncharacterized protein LOC103497440 [Cucumis melo] >KAA0045851.1 unc...	[more]
XP_038901892.1	7.36e-98	87.71	uncharacterized protein LOC120088571 [Benincasa hispida]	[more]
KAG7035221.1	1.03e-90	81.46	hypothetical protein SDJN02_02016, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022158697.1	1.03e-90	81.36	uncharacterized protein LOC111025162 [Momordica charantia]	[more]

BLAST of Chy11G187280 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37090.1	1.9e-29	45.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G37090.2	4.6e-28	45.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..112
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..69
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..123
None	No IPR available	PANTHER	PTHR36387	UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE-2, 6-DIAMINOPIMELATE LIGASE	coord: 4..176

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G187280.1	Chy11G187280.1	mRNA