Chy11G186970 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G186970
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	LOB domain-containing protein 36-like
Location	chrH11: 1251384 .. 1252782 (-)
RNA-Seq Expression	Chy11G186970
Synteny	Chy11G186970

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAACCGATCTCTACAATGCTAAAAAAGAATTAGCTTCTTATATTGGTCCTCAAGCTATGCTTCCTATTCTCCAACCTCAAACCACTCCTTCCCCTTACAATCATCATCTCTCCCCTATGATGGGCATTGCCCCATCCCCTTCACCTTCCCCTTCCGTTCCCGGTTCCTCGCAACAAATGATTATTCGGGACTCCGCCGTTACCACTCCTGCTCATCATCATCATCATCATCATTTACAACAACAACAACAACAACAATTGTTTGAGGCACAACAATTGGCGGCTGCGGTTGCGGCGAGAGAACAGGAAATGTTTAAAGCTTATGAACATAAGCAAAGCCAACAACAACAAAGGCAGCAAGAGCTATTGAGCTTTAACAACAACAACGTCAACAATCAAATGGGTGCTTCTAATTTGACATTGGGGACATTTGTGGATAATTCCTATCAACAAATTCAACAACATGATCATCAAAATTCTTCATCACATCCACTACAAGTACAACTGTTTCTTCAACCACAACAAACACAGCAACAGCTTGAACAACAACATCATCATCATCATCAATCTCACAAGCCTGAATCTACTACACATGCTGATGATGGTAGGATTAATAACAACAATATTAACATTGGTCCATCTTGTTAGTCTTATTTTCTTTTAATTTTAGGGATTGATTTTGTTTTGTTTTTCTTTTTTAATGATGATTATGACAAGACTGTTTCATGGATGGGATTAGTTTTAAATGGGAGGGAGTATTAGCATGCACAGCAGGAAAGATGCTTTTTGCATTTATGAATTATCTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTAATTTTAAAAAAAAAAAAAAAAAAACAGTGGAAAAAAAAATACAAATGTTGCAATATTATTTGGTTTTTGTGGTAAATGGCTAATTGAAGTCCCATTTTTTCTTTTGAGTGAAGGAGGGTGTCCTATAAAAGGAATTATTGTCTTTTCACTGCCATGGGATATTTCTCACTTATTAACTATAAATGTAACTCTTTTCTTATATATATATATATATATATATATAAATTTAACCCCTTTTCATTTCATTTCATTTCCTCCCCAATCCCTTTTGTTATCTTTTACCCTATACTACACTCTTTCCTTTTTTTGAATTTTTTTTGGGTGCAATCTATGTTGTACCCATCTATTGTTTAGTCTAAAATTGAATTGTTTTTCTTTTAGGCTACATGAAATTGCTCTTATTTTTTTCTTTCTTTTTGTTAGTATTTTGCTATTATATTGGTAACATCTCTATTTAGATTCTTCTTTAAAAAAATGAAAACAGATGTGTGTTTTTCTATGGGTTTAGGGTATGAAGATGCTAAAGATGGGTATGAAGATGCTAAAGATGTCTAA

mRNA sequence

ATGCAAACCGATCTCTACAATGCTAAAAAAGAATTAGCTTCTTATATTGGTCCTCAAGCTATGCTTCCTATTCTCCAACCTCAAACCACTCCTTCCCCTTACAATCATCATCTCTCCCCTATGATGGGCATTGCCCCATCCCCTTCACCTTCCCCTTCCGTTCCCGGTTCCTCGCAACAAATGATTATTCGGGACTCCGCCGTTACCACTCCTGCTCATCATCATCATCATCATCATTTACAACAACAACAACAACAACAATTGTTTGAGGCACAACAATTGGCGGCTGCGGTTGCGGCGAGAGAACAGGAAATGTTTAAAGCTTATGAACATAAGCAAAGCCAACAACAACAAAGGCAGCAAGAGCTATTGAGCTTTAACAACAACAACGTCAACAATCAAATGGGTGCTTCTAATTTGACATTGGGGACATTTGTGGATAATTCCTATCAACAAATTCAACAACATGATCATCAAAATTCTTCATCACATCCACTACAAGTACAACTGTTTCTTCAACCACAACAAACACAGCAACAGCTTGAACAACAACATCATCATCATCATCAATCTCACAAGCCTGAATCTACTACACATGCTGATGATGGGTATGAAGATGCTAAAGATGGGTATGAAGATGCTAAAGATGTCTAA

Coding sequence (CDS)

ATGCAAACCGATCTCTACAATGCTAAAAAAGAATTAGCTTCTTATATTGGTCCTCAAGCTATGCTTCCTATTCTCCAACCTCAAACCACTCCTTCCCCTTACAATCATCATCTCTCCCCTATGATGGGCATTGCCCCATCCCCTTCACCTTCCCCTTCCGTTCCCGGTTCCTCGCAACAAATGATTATTCGGGACTCCGCCGTTACCACTCCTGCTCATCATCATCATCATCATCATTTACAACAACAACAACAACAACAATTGTTTGAGGCACAACAATTGGCGGCTGCGGTTGCGGCGAGAGAACAGGAAATGTTTAAAGCTTATGAACATAAGCAAAGCCAACAACAACAAAGGCAGCAAGAGCTATTGAGCTTTAACAACAACAACGTCAACAATCAAATGGGTGCTTCTAATTTGACATTGGGGACATTTGTGGATAATTCCTATCAACAAATTCAACAACATGATCATCAAAATTCTTCATCACATCCACTACAAGTACAACTGTTTCTTCAACCACAACAAACACAGCAACAGCTTGAACAACAACATCATCATCATCATCAATCTCACAAGCCTGAATCTACTACACATGCTGATGATGGGTATGAAGATGCTAAAGATGGGTATGAAGATGCTAAAGATGTCTAA

Protein sequence

MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIAPSPSPSPSVPGSSQQMIIRDSAVTTPAHHHHHHHLQQQQQQQLFEAQQLAAAVAAREQEMFKAYEHKQSQQQQRQQELLSFNNNNVNNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQQLEQQHHHHHQSHKPESTTHADDGYEDAKDGYEDAKDV*

Homology

[Close]

BLAST of Chy11G186970 vs. ExPASy Swiss-Prot
Match: Q9FKZ3 (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.1e-10
Identity = 80/228 (35.09%), Postives = 98/228 (42.98%), Query Frame = 0


Query: 4   DLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIAPSPSPSPSVPGSSQQMII 63
           DL NAKKELA+Y+GPQAMLPILQP     P                P P  P SS     
Sbjct: 99  DLENAKKELATYVGPQAMLPILQPHFMSLP----------------PQPQRPSSS----- 158

Query: 64  RDSAVTTPAHHHH--------HHHLQQQQQQQLFEAQQLAAAVAAREQEMFKAY-----E 123
             SA     HHH+           L  QQQQQ+FEAQQLAA    ++ EMF+AY      
Sbjct: 159 --SASVLTQHHHNLLPMMAIPTGQLYHQQQQQIFEAQQLAAVAREQQNEMFRAYGGGGGS 218

Query: 124 HKQSQQQQRQQELLSFNNNNVN-----------NQMGASNLTL------GTFVD-----N 183
                Q Q Q E+L FNN   +           NQ+ +    +      G FVD     N
Sbjct: 219 SSPHHQNQAQAEILRFNNGFDSVPAGSVTVTGFNQLSSGGTAVTGMSLGGNFVDSPSTNN 278

Query: 184 SYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQQLEQQHHHHHQSHKPES 197
           +Y   QQ  H +      + QLF+ P Q+ Q L  Q        +P S
Sbjct: 279 NYHTDQQLHHHHQPQQHHEAQLFI-PSQSSQPLPLQTQETQTQTQPNS 302

[Close]

BLAST of Chy11G186970 vs. ExPASy TrEMBL
Match: A0A0A0LM25 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G295940 PE=3 SV=1)

HSP 1 Score: 373.2 bits (957), Expect = 7.2e-100
Identity = 200/203 (98.52%), Postives = 200/203 (98.52%), Query Frame = 0


Query: 1   MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIAPSPSPSPSVPGSSQQ 60
           MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIAPSPSPSPSVPGSSQQ
Sbjct: 96  MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIAPSPSPSPSVPGSSQQ 155

Query: 61  MIIRDSAVTTPAHHHHHHHLQQQQQQQLFEAQQLAAAVAAREQEMFKAYEHKQSQQQQRQ 120
           MIIRDSAVTTPAHHHHHH   QQQQQQLFEAQQLAAAVAAREQEMFKAYEHKQSQQQQRQ
Sbjct: 156 MIIRDSAVTTPAHHHHHH--LQQQQQQLFEAQQLAAAVAAREQEMFKAYEHKQSQQQQRQ 215

Query: 121 QELLSFNNNNVNNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQQ 180
           QELLSFNNNNVNNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQQ
Sbjct: 216 QELLSFNNNNVNNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQQ 275

Query: 181 LEQQHHHHHQSHKPESTTHADDG 204
           LEQQHHHHHQSHKPESTTHADDG
Sbjct: 276 LEQQHHHHHQSHKPESTTHADDG 296

[Close]

BLAST of Chy11G186970 vs. ExPASy TrEMBL
Match: A0A1S3C635 (LOB domain-containing protein 36-like OS=Cucumis melo OX=3656 GN=LOC103497461 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.2e-92
Identity = 193/204 (94.61%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGI-APSPSPSPSVPGSSQ 60
           MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGI  PSPSPSPSVPGSSQ
Sbjct: 96  MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIVGPSPSPSPSVPGSSQ 155

Query: 61  QMIIRDSAVTTPAHHHHHHHLQQQQQQQLFEAQQLAAAVAAREQEMFKAYEHKQSQQQQR 120
           QMIIRDSAVTTPAHHHHHHH   QQQQQLFEAQQLAAAVAARE EMFKAYEHKQSQQQQR
Sbjct: 156 QMIIRDSAVTTPAHHHHHHH-HLQQQQQLFEAQQLAAAVAARE-EMFKAYEHKQSQQQQR 215

Query: 121 QQELLSFNNNNVNNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQ 180
           QQELLSFNNNN NNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQ
Sbjct: 216 QQELLSFNNNN-NNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQ 275

Query: 181 QLEQQHHHHHQSHKPESTTHADDG 204
             +Q HHHHHQSHKPESTTHADDG
Sbjct: 276 LEQQHHHHHHQSHKPESTTHADDG 296

[Close]

BLAST of Chy11G186970 vs. ExPASy TrEMBL
Match: A0A5A7TSN9 (LOB domain-containing protein 36-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G004140 PE=3 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 4.2e-92
Identity = 193/204 (94.61%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGI-APSPSPSPSVPGSSQ 60
           MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGI  PSPSPSPSVPGSSQ
Sbjct: 96  MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIVGPSPSPSPSVPGSSQ 155

Query: 61  QMIIRDSAVTTPAHHHHHHHLQQQQQQQLFEAQQLAAAVAAREQEMFKAYEHKQSQQQQR 120
           QMIIRDSAVTTPAHHHHHHH   QQQQQLFEAQQLAAAVAARE EMFKAYEHKQSQQQQR
Sbjct: 156 QMIIRDSAVTTPAHHHHHHH-HLQQQQQLFEAQQLAAAVAARE-EMFKAYEHKQSQQQQR 215

Query: 121 QQELLSFNNNNVNNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQ 180
           QQELLSFNNNN NNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQ
Sbjct: 216 QQELLSFNNNN-NNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQ 275

Query: 181 QLEQQHHHHHQSHKPESTTHADDG 204
             +Q HHHHHQSHKPESTTHADDG
Sbjct: 276 LEQQHHHHHHQSHKPESTTHADDG 296

[Close]

BLAST of Chy11G186970 vs. ExPASy TrEMBL
Match: A0A6J1EQF1 (LOB domain-containing protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111434896 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 1.7e-37
Identity = 140/260 (53.85%), Postives = 156/260 (60.00%), Query Frame = 0


Query: 1   MQTDLYNAKKELASYIGPQAMLPILQPQ------------TTPS-----PYNHHLSPMMG 60
           MQ+DLYNAKKELASY+GPQAM+PILQP             T+PS     PYN  +SPM G
Sbjct: 96  MQSDLYNAKKELASYVGPQAMIPILQPSTAIMTTNPQGPVTSPSSSVLLPYN--MSPMFG 155

Query: 61  IAPSPSPSPSVPGSSQQMIIRDSAVTTPAHHHHHHHLQQQQQQQLFEAQQLAAAVAARE- 120
           I     PS    GSSQQM+IR+S    P     H H  QQQQQQLFEAQQLAAAVAARE 
Sbjct: 156 I-----PSSGGGGSSQQMLIRES----PHQQQQHQHQIQQQQQQLFEAQQLAAAVAAREQ 215

Query: 121 QEMFKAYEHKQSQQQQRQQ-------------ELLSFNN--------------NNVNNQM 180
           QEMF+AYE KQ+QQQQ+QQ             ELL FN                  NNQM
Sbjct: 216 QEMFRAYEQKQTQQQQQQQQQQQQHSPSQRQHELLRFNGFDPAGVGAGAGAGAGGFNNQM 275

Query: 181 GA-SNLTLGTFVDNSYQQIQQHDHQNSSS-----HPLQVQLFLQPQQTQ----QQLEQQH 204
            + S+LTLGTF DNSYQ   Q +H +S S     HPLQVQLF QPQQTQ    QQ +QQ 
Sbjct: 276 NSPSDLTLGTFPDNSYQIQTQPEHSHSHSHSHHHHPLQVQLFPQPQQTQLDQSQQQQQQP 335

[Close]

BLAST of Chy11G186970 vs. ExPASy TrEMBL
Match: A0A6J1I2T4 (LOB domain-containing protein 36-like OS=Cucurbita maxima OX=3661 GN=LOC111470410 PE=3 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 3.0e-37
Identity = 139/257 (54.09%), Postives = 155/257 (60.31%), Query Frame = 0


Query: 1   MQTDLYNAKKELASYIGPQAMLPILQPQ------------TTPS-----PYNHHLSPMMG 60
           MQ+DLYNAKKELASY+GPQAM+PILQP             T+PS     PYN  +SPM G
Sbjct: 96  MQSDLYNAKKELASYVGPQAMIPILQPSTAIMTSNPQGPVTSPSSSVLLPYN--MSPMFG 155

Query: 61  IAPSPSPSPSVPGSSQQMIIRDSAVTTPAHHHHHHHLQQQQQQQLFEAQQLAAAVAARE- 120
           I     PS    GSSQQM+IR+S      H    HH Q QQQQQLFEAQQLAAAVAARE 
Sbjct: 156 I-----PSSGGGGSSQQMLIRES-----PHQQQQHHHQIQQQQQLFEAQQLAAAVAAREQ 215

Query: 121 QEMFKAYEHKQSQQQQRQQ--------ELLSFNN--------------NNVNNQMGA-SN 180
           QEMF+AYE KQ+QQ Q+QQ        ELL FN                  NNQM + S+
Sbjct: 216 QEMFRAYEQKQTQQHQQQQHSPSQRQHELLRFNGFDPAGVGAGAGTGAGGFNNQMNSPSD 275

Query: 181 LTLGTFVDNSYQQIQQHDHQNSSS-------HPLQVQLFLQPQQTQ----QQLEQQHHHH 204
           LTLGTF DNSYQ   Q +H +S S       HPLQVQLF QPQQTQ    QQ +QQ H H
Sbjct: 276 LTLGTFPDNSYQIQTQPEHSHSHSHSHSHHHHPLQVQLFPQPQQTQLDQSQQQQQQPHPH 335

[Close]

BLAST of Chy11G186970 vs. NCBI nr
Match: XP_004148465.1 (LOB domain-containing protein 36 [Cucumis sativus] >XP_031736456.1 LOB domain-containing protein 36 [Cucumis sativus] >KGN62069.1 hypothetical protein Csa_006727 [Cucumis sativus])

HSP 1 Score: 374 bits (960), Expect = 2.90e-128
Identity = 200/203 (98.52%), Postives = 200/203 (98.52%), Query Frame = 0


Query: 1   MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIAPSPSPSPSVPGSSQQ 60
           MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIAPSPSPSPSVPGSSQQ
Sbjct: 96  MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIAPSPSPSPSVPGSSQQ 155

Query: 61  MIIRDSAVTTPAHHHHHHHLQQQQQQQLFEAQQLAAAVAAREQEMFKAYEHKQSQQQQRQ 120
           MIIRDSAVTTPAHHHHHH   QQQQQQLFEAQQLAAAVAAREQEMFKAYEHKQSQQQQRQ
Sbjct: 156 MIIRDSAVTTPAHHHHHH--LQQQQQQLFEAQQLAAAVAAREQEMFKAYEHKQSQQQQRQ 215

Query: 121 QELLSFNNNNVNNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQQ 180
           QELLSFNNNNVNNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQQ
Sbjct: 216 QELLSFNNNNVNNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQQ 275

Query: 181 LEQQHHHHHQSHKPESTTHADDG 203
           LEQQHHHHHQSHKPESTTHADDG
Sbjct: 276 LEQQHHHHHQSHKPESTTHADDG 296

[Close]

BLAST of Chy11G186970 vs. NCBI nr
Match: XP_008457883.1 (PREDICTED: LOB domain-containing protein 36-like [Cucumis melo] >XP_008457884.1 PREDICTED: LOB domain-containing protein 36-like [Cucumis melo] >KAA0045878.1 LOB domain-containing protein 36-like [Cucumis melo var. makuwa])

HSP 1 Score: 348 bits (893), Expect = 4.66e-118
Identity = 193/204 (94.61%), Postives = 194/204 (95.10%), Query Frame = 0


Query: 1   MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIA-PSPSPSPSVPGSSQ 60
           MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGI  PSPSPSPSVPGSSQ
Sbjct: 96  MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIVGPSPSPSPSVPGSSQ 155

Query: 61  QMIIRDSAVTTPAHHHHHHHLQQQQQQQLFEAQQLAAAVAAREQEMFKAYEHKQSQQQQR 120
           QMIIRDSAVTTPAHHHHHHH   QQQQQLFEAQQLAAAVAARE EMFKAYEHKQSQQQQR
Sbjct: 156 QMIIRDSAVTTPAHHHHHHH-HLQQQQQLFEAQQLAAAVAARE-EMFKAYEHKQSQQQQR 215

Query: 121 QQELLSFNNNNVNNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQ 180
           QQELLSFNNNN NNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQ
Sbjct: 216 QQELLSFNNNN-NNQMGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQ 275

Query: 181 QLEQQHHHHHQSHKPESTTHADDG 203
             +Q HHHHHQSHKPESTTHADDG
Sbjct: 276 LEQQHHHHHHQSHKPESTTHADDG 296

[Close]

BLAST of Chy11G186970 vs. NCBI nr
Match: XP_038902117.1 (LOB domain-containing protein 36 [Benincasa hispida])

HSP 1 Score: 204 bits (519), Expect = 4.27e-61
Identity = 147/233 (63.09%), Postives = 164/233 (70.39%), Query Frame = 0


Query: 1   MQTDLYNAKKELASYIGPQAMLPILQPQT-TPSPYNHHLSPMMGIAPSPSPSPSVPGSSQ 60
           MQ DLYNAKKELASYIGPQAMLPILQPQ  TP+P  +++SPM+ I P    + + PGSSQ
Sbjct: 96  MQNDLYNAKKELASYIGPQAMLPILQPQPPTPNPTPYNMSPMLTIPPPAIAAATAPGSSQ 155

Query: 61  QMI-IRDSAVTTPAHHHHHHHLQQQ----QQQQLFEAQQLAAAVAAREQ-EMFKAYEHKQ 120
           Q I IRDSA        HHH +QQQ    QQQQLFEAQQLAAAVAAREQ EMF+AYEHKQ
Sbjct: 156 QQILIRDSA--------HHHQMQQQHQHQQQQQLFEAQQLAAAVAAREQQEMFRAYEHKQ 215

Query: 121 SQQQQRQQ--------ELLSFNN--------NNVNNQMGAS--NLTLGTFVDNSYQQIQ- 180
           +QQQQRQQ        ELL FN            NNQM +S  NLTLGTFVDN+  QIQ 
Sbjct: 216 NQQQQRQQQQQQQQQHELLRFNGFDAGAAGAGGFNNQMNSSGSNLTLGTFVDNTSYQIQT 275

Query: 181 QHDHQNSS-SHPLQVQLFLQPQQTQQQLEQQ---HHHHHQSHKPESTTHADDG 203
           Q +H + S SHPLQVQLFLQPQQ+QQQ++Q    HH  HQSHKPE T  ADDG
Sbjct: 276 QPEHSSHSHSHPLQVQLFLQPQQSQQQIDQSQQTHHSLHQSHKPEPTPSADDG 320

[Close]

BLAST of Chy11G186970 vs. NCBI nr
Match: KAG7011164.1 (LOB domain-containing protein 36, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 168 bits (426), Expect = 4.47e-48
Identity = 140/258 (54.26%), Postives = 156/258 (60.47%), Query Frame = 0


Query: 1   MQTDLYNAKKELASYIGPQAMLPILQPQT------------TPS-----PYNHHLSPMMG 60
           MQ+DLYNAKKELASY+GPQAM+PILQP T            +PS     PYN  +SPM G
Sbjct: 1   MQSDLYNAKKELASYVGPQAMIPILQPSTAIMTTNPQGPVTSPSSSVLLPYN--MSPMFG 60

Query: 61  IAPSPSPSPSVPGSSQQMIIRDSAVTTPAHHHHHHHLQQQQQQQLFEAQQLAAAVAAREQ 120
           I     PS    GSSQQM+IR+S    P     H H  QQQQQQLFEAQQLAAAVAAREQ
Sbjct: 61  I-----PSSGGGGSSQQMLIRES----PHQQQQHQHQIQQQQQQLFEAQQLAAAVAAREQ 120

Query: 121 -EMFKAYEHKQSQQQQRQQ-------------ELLSFNN------------NNVNNQMGA 180
            EMF+AYE KQ+QQQQ+QQ             ELL FN                NNQM +
Sbjct: 121 QEMFRAYEQKQTQQQQQQQQQQQQHSPSQRQHELLRFNGFDPAGVGAGAGAGGFNNQMNS 180

Query: 181 -SNLTLGTFVDNSYQQIQQHDHQNSSSH-----PLQVQLFLQPQQTQ----QQLEQQHHH 203
            S+LTLGTF DNSYQ   Q +H +S SH     PLQVQLF QPQQTQ    QQ +QQ H 
Sbjct: 181 PSDLTLGTFPDNSYQIQTQPEHSHSHSHSHHHHPLQVQLFPQPQQTQLDQSQQQQQQPHP 240

[Close]

BLAST of Chy11G186970 vs. NCBI nr
Match: KAG6571399.1 (LOB domain-containing protein 36, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 169 bits (429), Expect = 2.23e-47
Identity = 141/263 (53.61%), Postives = 157/263 (59.70%), Query Frame = 0


Query: 1   MQTDLYNAKKELASYIGPQAMLPILQPQT------------TPS-----PYNHHLSPMMG 60
           MQ+DLYNAKKELASY+GPQAM+PILQP T            +PS     PYN  +SPM G
Sbjct: 96  MQSDLYNAKKELASYVGPQAMIPILQPSTAIMTTNPQGPVTSPSSSVLLPYN--MSPMFG 155

Query: 61  IAPSPSPSPSVPGSSQQMIIRDSAVTTPAHHHHHHHLQQQQQQQLFEAQQLAAAVAAREQ 120
           I     PS    GSSQQM+IR+S    P     HHH  QQQQQQLFEAQQLAAAVAAREQ
Sbjct: 156 I-----PSSGGGGSSQQMLIRES----PHQQQQHHHQIQQQQQQLFEAQQLAAAVAAREQ 215

Query: 121 -EMFKAYEHKQSQQQQRQQ--------------ELLSFNN--------------NNVNNQ 180
            EMF+AYE KQ+QQQQ+QQ              ELL FN                  NNQ
Sbjct: 216 QEMFRAYEQKQTQQQQQQQQQQQQQHSPSQRQHELLRFNGFDPAGVGAGAGAGAGGFNNQ 275

Query: 181 MGA-SNLTLGTFVDNSYQQIQQHDHQNSSSH-------PLQVQLFLQPQQTQ----QQLE 203
           M + S+LTLGTF DNSYQ   Q +H +S SH       PLQVQLF QPQQTQ    QQ +
Sbjct: 276 MNSPSDLTLGTFPDNSYQIQTQPEHSHSHSHSHSHHHHPLQVQLFPQPQQTQLDQSQQQQ 335

[Close]

BLAST of Chy11G186970 vs. TAIR 10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1 )

HSP 1 Score: 66.2 bits (160), Expect = 3.6e-11
Identity = 80/228 (35.09%), Postives = 98/228 (42.98%), Query Frame = 0


Query: 4   DLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIAPSPSPSPSVPGSSQQMII 63
           DL NAKKELA+Y+GPQAMLPILQP     P                P P  P SS     
Sbjct: 99  DLENAKKELATYVGPQAMLPILQPHFMSLP----------------PQPQRPSSS----- 158

Query: 64  RDSAVTTPAHHHH--------HHHLQQQQQQQLFEAQQLAAAVAAREQEMFKAY-----E 123
             SA     HHH+           L  QQQQQ+FEAQQLAA    ++ EMF+AY      
Sbjct: 159 --SASVLTQHHHNLLPMMAIPTGQLYHQQQQQIFEAQQLAAVAREQQNEMFRAYGGGGGS 218

Query: 124 HKQSQQQQRQQELLSFNNNNVN-----------NQMGASNLTL------GTFVD-----N 183
                Q Q Q E+L FNN   +           NQ+ +    +      G FVD     N
Sbjct: 219 SSPHHQNQAQAEILRFNNGFDSVPAGSVTVTGFNQLSSGGTAVTGMSLGGNFVDSPSTNN 278

Query: 184 SYQQIQQHDHQNSSSHPLQVQLFLQPQQTQQQLEQQHHHHHQSHKPES 197
           +Y   QQ  H +      + QLF+ P Q+ Q L  Q        +P S
Sbjct: 279 NYHTDQQLHHHHQPQQHHEAQLFI-PSQSSQPLPLQTQETQTQTQPNS 302

[Close]

BLAST of Chy11G186970 vs. TAIR 10
Match: AT2G23660.1 (LOB domain-containing protein 10 )

HSP 1 Score: 49.7 bits (117), Expect = 3.5e-06
Identity = 64/195 (32.82%), Postives = 94/195 (48.21%), Query Frame = 0


Query: 1   MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIAPSPSPSPSVPGSSQQ 60
           +Q DL  AK+EL  Y+GP A++P   P   P   N   + MM +   P   P V    + 
Sbjct: 94  IQQDLLTAKEELVGYLGPDAVIP--PPYLPPIGNNPPPNFMMSMEGMP---PGVIPQGEP 153

Query: 61  MIIRDSAVTTPAHHHHHHHLQQQQQQQLF---EAQQLAAAVAAR--EQEMFKAYEHKQSQ 120
           ++IR+     P     HHH Q Q +Q  F   +AQ++AA +  R  +Q MF  Y      
Sbjct: 154 LMIRE-----PNMSQQHHHQQPQDEQLQFIASDAQRMAAMMLERGDQQGMFNGY----GI 213

Query: 121 QQQRQQELLSFNNNNVNNQ-----MGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQL 180
                     FN  +VN+Q     +   +L LG+F D +YQ  Q+ +H + +   LQ QL
Sbjct: 214 DNNGSVTATGFNQMDVNDQGAGGSLSGPSLALGSFGD-AYQMGQETEHGHINHDQLQTQL 273

Query: 181 FLQP--QQTQQQLEQ 184
            LQP  Q+ Q+Q E+
Sbjct: 274 MLQPPLQEGQEQTEE 273

[Close]

BLAST of Chy11G186970 vs. TAIR 10
Match: AT2G23660.2 (LOB domain-containing protein 10 )

HSP 1 Score: 49.7 bits (117), Expect = 3.5e-06
Identity = 64/195 (32.82%), Postives = 94/195 (48.21%), Query Frame = 0


Query: 1   MQTDLYNAKKELASYIGPQAMLPILQPQTTPSPYNHHLSPMMGIAPSPSPSPSVPGSSQQ 60
           +Q DL  AK+EL  Y+GP A++P   P   P   N   + MM +   P   P V    + 
Sbjct: 94  IQQDLLTAKEELVGYLGPDAVIP--PPYLPPIGNNPPPNFMMSMEGMP---PGVIPQGEP 153

Query: 61  MIIRDSAVTTPAHHHHHHHLQQQQQQQLF---EAQQLAAAVAAR--EQEMFKAYEHKQSQ 120
           ++IR+     P     HHH Q Q +Q  F   +AQ++AA +  R  +Q MF  Y      
Sbjct: 154 LMIRE-----PNMSQQHHHQQPQDEQLQFIASDAQRMAAMMLERGDQQGMFNGY----GI 213

Query: 121 QQQRQQELLSFNNNNVNNQ-----MGASNLTLGTFVDNSYQQIQQHDHQNSSSHPLQVQL 180
                     FN  +VN+Q     +   +L LG+F D +YQ  Q+ +H + +   LQ QL
Sbjct: 214 DNNGSVTATGFNQMDVNDQGAGGSLSGPSLALGSFGD-AYQMGQETEHGHINHDQLQTQL 273

Query: 181 FLQP--QQTQQQLEQ 184
            LQP  Q+ Q+Q E+
Sbjct: 274 MLQPPLQEGQEQTEE 273

The following BLAST results are available for this feature:

BLAST of Chy11G186970 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FKZ3	5.1e-10	35.09	LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 S...	[more]

BLAST of Chy11G186970 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LM25	7.2e-100	98.52	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G295940 PE=3 SV...	[more]
A0A1S3C635	4.2e-92	94.61	LOB domain-containing protein 36-like OS=Cucumis melo OX=3656 GN=LOC103497461 PE...	[more]
A0A5A7TSN9	4.2e-92	94.61	LOB domain-containing protein 36-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A6J1EQF1	1.7e-37	53.85	LOB domain-containing protein 36-like OS=Cucurbita moschata OX=3662 GN=LOC111434...	[more]
A0A6J1I2T4	3.0e-37	54.09	LOB domain-containing protein 36-like OS=Cucurbita maxima OX=3661 GN=LOC11147041...	[more]

BLAST of Chy11G186970 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148465.1	2.90e-128	98.52	LOB domain-containing protein 36 [Cucumis sativus] >XP_031736456.1 LOB domain-co...	[more]
XP_008457883.1	4.66e-118	94.61	PREDICTED: LOB domain-containing protein 36-like [Cucumis melo] >XP_008457884.1 ...	[more]
XP_038902117.1	4.27e-61	63.09	LOB domain-containing protein 36 [Benincasa hispida]	[more]
KAG7011164.1	4.47e-48	54.26	LOB domain-containing protein 36, partial [Cucurbita argyrosperma subsp. argyros...	[more]
KAG6571399.1	2.23e-47	53.61	LOB domain-containing protein 36, partial [Cucurbita argyrosperma subsp. sororia...	[more]

BLAST of Chy11G186970 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66870.1	3.6e-11	35.09	ASYMMETRIC LEAVES 2-like 1	[more]
AT2G23660.1	3.5e-06	32.82	LOB domain-containing protein 10	[more]
AT2G23660.2	3.5e-06	32.82	LOB domain-containing protein 10	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..217
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..217
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 2..183
None	No IPR available	PANTHER	PTHR31301:SF155	LOB DOMAIN-CONTAINING PROTEIN 36-LIKE	coord: 2..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G186970.1	Chy11G186970.1	mRNA