Chy11G186960 (gene) Cucumber (hystrix) v1

Overview


Name	Chy11G186960
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	50S ribosomal protein L25
Location	chrH11: 1246120 .. 1248344 (-)
RNA-Seq Expression	Chy11G186960
Synteny	Chy11G186960

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAACTGGTGGCGCTCCGCCGGAACGAACCTCAGGTTGGCGGCGTTTTCAGGAACAAAGTCGGAATCGTTTCCATTTTCATCATTTCGAGCGGCTTACCATACGATCCAAGCAATTCCTAGAGAGTGCAGCGGCCGCAAAATTTCGAGCAAAGATAGAGCTCAAGGAAGAATACCCGCTGTCGTTTTCAGTCAACAAATCCTTGAGAAAAACTCAGTCCACGGATCGCCGTCGCGAAAGCATTTGCTCACTACAGAGCGAAAGCAAATCCACTCCATTCTCAAATCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGCTCAAACTTCAGATTCGTGCTGGTTCCGGGTCTTCTGTACTTCTTGAATCAGGATCCATCCTTCCAATTAAAGTAAGCCATTCACTTCTCTCTACGTGTTTGTTTATGTTTAATTCAACTTGATTTTTTCCTTTTCATTTCTTGTTATGGAGTAACTCCTTGAGATTTTTCAGATTCATAGGAATGAAGAGACAGGGAAGATCTTCAATATTGTGTTTGTATGGGCTGATGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTTAAAGGCGAAGAGGCTTGCCCTGGTCTTCAGAAAGGTAACCAATGAAGAAATGCTTATTTAATTCCCTAGCTGACGTAGTCGTGTTCTTGATTTTGTTAATATTGAATTAATTTGAGCTATTGCAAGAAATTGGGAAATTAGTTTATTGAATCCAGAAAATATATTGAGCCTTTTTTGCACTTCTATAGTTGCAAAGATGACACCAAGGTTTTGTCTTTTGAGAAGCAAAAAATTTGGTCCTATGATTCTTACTTTTCCTTACTATATGAAATGTGGACAACCCACTTTGGAAAAAATACACCTAGAAACTGTGCAATGTTTAATCATCTTTGATCTTTCTTCCTCCTGGATTATTCGAAGATTTTTTGTTTTCTTTCTGTCTAAGGACCCCAAAGAAAGTAGCTTTAAACACTTGTTGATCCACTGTACTTTAGGAGTGAGTCGAGTGACATAAAAGTGTTGTTTTTAGCTATTAAATTATATACTTCAGCAATCCTGAAGACTTAACACACTCTCCGAAACACTGAACATTTATTGGGGGAAAATAGAGAATACAAGGGGGTGTACAACTACTAAGTGACTTTACCCAAGCTTTCCATAACTAGCTGATCTTACTTCATTTGTGTCTGTCCCACGAAAAGTAGAATGTTCTAGAAAAATCAGTATAATGGTATGGTGAACCTTTACGAAACATTTCTATTGAGGTGCAGAGCAGCTAAAGGAGGAAATTTCTTACATATTTCTAGCTGAAAATTTCTTTAATTCTTAACGTTAAGTCTTTTTGGACCATTTTTGTGAGCCATGTTAGAATCTTTTAGTTATTAGTGATTAGCAAATCTTGTGATGTATGGATGAAGTTGTTTCTTTGGGGAATATATGACATTCCCAAAGTTCAAAGTTTGAACTTTGGTCAAACTTACCGGGGCATGACCTTGATAAAGGGCTAAGAAATCATGAGTTTAGTCCATGGTGGTGGCACCTACCTAGGATTTAATATTCTACGAGTTTTTTTACACTCAAATGTTACCTGTTCAAGGATATCTTGGAAAAAAAACTATAGTCAAACATAGGTAGATGAACCACCATTAGCTTCTTCACCTTGTTCTATAATGGTACCCAGTGCCTGCAAGGCTTTCTCAAATTTGCGCAACAGTTCGGTTTGTGTTTATGATATTTAAACATGGTAGATGATAAAAGGTTTTGTTCTCTATCTGATCGTAGTTAGGATGATAAAGCATTGGTAATTAAAATTCTACAATCTTGCAAAACTTGTATGGCGGTCCATATTTTCCTTTAGTAGTTTTCTTATCTGAATCTTTGTCATCCTGTCAAATGTAGTTTTGAAATCATACTTTAATTTTGTGGAAAACAGGAGGTCAGCTGAACAAGATAAGAACTAGCCTGAAATATCTTTGCCCTGCCGAACACATTCCCTCAAAGATTGAGGTGGATGTAAGTAATCTGGACGTTGGGGATAGAATTTTCATTCGCGATGTAGACGTCCACTCTTCTTTGAAGCTACTTAGCAAGAACGAAGTGATGCCTATATGTAAAATAGTCACAACCAAGTCTGAAACTGCAAACACAGAAACTTCAGCAACTTCAGAAACGTCAGAAACTTCAGAAACTTCATGA

mRNA sequence

ATGGCCAACTGGTGGCGCTCCGCCGGAACGAACCTCAGGTTGGCGGCGTTTTCAGGAACAAAGTCGGAATCGTTTCCATTTTCATCATTTCGAGCGGCTTACCATACGATCCAAGCAATTCCTAGAGAGTGCAGCGGCCGCAAAATTTCGAGCAAAGATAGAGCTCAAGGAAGAATACCCGCTGTCGTTTTCAGTCAACAAATCCTTGAGAAAAACTCAGTCCACGGATCGCCGTCGCGAAAGCATTTGCTCACTACAGAGCGAAAGCAAATCCACTCCATTCTCAAATCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGCTCAAACTTCAGATTCGTGCTGGTTCCGGGTCTTCTGTACTTCTTGAATCAGGATCCATCCTTCCAATTAAAATTCATAGGAATGAAGAGACAGGGAAGATCTTCAATATTGTGTTTGTATGGGCTGATGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTTAAAGGCGAAGAGGCTTGCCCTGGTCTTCAGAAAGGAGGTCAGCTGAACAAGATAAGAACTAGCCTGAAATATCTTTGCCCTGCCGAACACATTCCCTCAAAGATTGAGGTGGATGTAAGTAATCTGGACGTTGGGGATAGAATTTTCATTCGCGATGTAGACGTCCACTCTTCTTTGAAGCTACTTAGCAAGAACGAAGTGATGCCTATATGTAAAATAGTCACAACCAAGTCTGAAACTGCAAACACAGAAACTTCAGCAACTTCAGAAACGTCAGAAACTTCAGAAACTTCATGA

Coding sequence (CDS)

ATGGCCAACTGGTGGCGCTCCGCCGGAACGAACCTCAGGTTGGCGGCGTTTTCAGGAACAAAGTCGGAATCGTTTCCATTTTCATCATTTCGAGCGGCTTACCATACGATCCAAGCAATTCCTAGAGAGTGCAGCGGCCGCAAAATTTCGAGCAAAGATAGAGCTCAAGGAAGAATACCCGCTGTCGTTTTCAGTCAACAAATCCTTGAGAAAAACTCAGTCCACGGATCGCCGTCGCGAAAGCATTTGCTCACTACAGAGCGAAAGCAAATCCACTCCATTCTCAAATCCGTTGAGCTCCCTTTCTTTTGCTCCACTAGGCTCAAACTTCAGATTCGTGCTGGTTCCGGGTCTTCTGTACTTCTTGAATCAGGATCCATCCTTCCAATTAAAATTCATAGGAATGAAGAGACAGGGAAGATCTTCAATATTGTGTTTGTATGGGCTGATGAAGGCTCGGAGTTGAAGGTAGATGTGCCAATTGTTTTTAAAGGCGAAGAGGCTTGCCCTGGTCTTCAGAAAGGAGGTCAGCTGAACAAGATAAGAACTAGCCTGAAATATCTTTGCCCTGCCGAACACATTCCCTCAAAGATTGAGGTGGATGTAAGTAATCTGGACGTTGGGGATAGAATTTTCATTCGCGATGTAGACGTCCACTCTTCTTTGAAGCTACTTAGCAAGAACGAAGTGATGCCTATATGTAAAATAGTCACAACCAAGTCTGAAACTGCAAACACAGAAACTTCAGCAACTTCAGAAACGTCAGAAACTTCAGAAACTTCATGA

Protein sequence

MANWWRSAGTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRLKLQIRAGSGSSVLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPAEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTTKSETANTETSATSETSETSETS*

Homology

[Close]

BLAST of Chy11G186960 vs. ExPASy Swiss-Prot
Match: Q2GII5 (50S ribosomal protein L25 OS=Anaplasma phagocytophilum (strain HZ) OX=212042 GN=rplY PE=3 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 7.7e-13
Identity = 33/108 (30.56%), Postives = 66/108 (61.11%), Query Frame = 0


Query: 132 IHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPA 191
           I ++  +G I ++ F + D+ +E+K++VP+VF  E+ C G+++GG +N +  SL   C  
Sbjct: 82  IQKHPVSGAIAHVDFQFVDQDAEMKMEVPLVFLNEQKCVGVKRGGVINILHRSLIIRCSP 141

Query: 192 EHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTT 240
            HIP  +EVD+ ++ +G  + + D+ + S++ ++ K E   I  +V +
Sbjct: 142 HHIPKSLEVDLIDVAIGHSLHVSDLKLPSTINVVMKEEDPVIATVVAS 189

[Close]

BLAST of Chy11G186960 vs. ExPASy Swiss-Prot
Match: Q5GTJ0 (50S ribosomal protein L25 OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) OX=292805 GN=rplY PE=3 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 1.0e-12
Identity = 67/221 (30.32%), Postives = 105/221 (47.51%), Query Frame = 0


Query: 36  TIQAIPRECSGRKISSKDRAQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSIL 95
           TI A  R+ +  K     R +G IPAVV+ +     N+V+        LT   K+     
Sbjct: 8   TINAELRDVTKTKAIRSLRKKGNIPAVVYGK---GHNNVN--------LTLSAKE---FT 67

Query: 96  KSVELPFFCSTRLKLQIRAGSGSSVLLESGSILPIKIHRNEETGKIFNIVFVWADEGSEL 155
           K  +L F  +  ++L I   SG     E   +  I+ H  ++T  I ++ F + D+GSE+
Sbjct: 68  KQYKLGFLSAHVIELDI---SGKK---EYALVRDIQWHVVKDT--IQHVDFQFVDKGSEI 127

Query: 156 KVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPAEHIPSKIEVDVSNLDVGDRIFIRD 215
           K+D+P+ F  E   PG++ GG LN +  S+   C  + IP  IEVD+S   +G  + I D
Sbjct: 128 KIDIPLSFVNESKSPGIKLGGVLNVLCRSITVKCSPDKIPQAIEVDLSGKMIGQSVHISD 187

Query: 216 VDVHSSLKLLSKNEVMPICKIVTTKSETANTETSATSETSE 257
           V +   +KL +  E      +VT  +  +  E S    T E
Sbjct: 188 VKLPGGVKLAAHEE--ENFTVVTISAADSGVEESQVETTEE 204

[Close]

BLAST of Chy11G186960 vs. ExPASy Swiss-Prot
Match: Q5P9A5 (50S ribosomal protein L25 OS=Anaplasma marginale (strain St. Maries) OX=234826 GN=rplY PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.9e-12
Identity = 38/126 (30.16%), Postives = 71/126 (56.35%), Query Frame = 0


Query: 131 KIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCP 190
           +I ++  +G + ++ F + D G+E+KV+VP+VF  E+ C G++ GG LN +  SL   C 
Sbjct: 81  EIQKHPVSGAVSHVDFQFVDRGAEIKVEVPLVFLNEQKCAGVKLGGALNILHRSLLIRCA 140

Query: 191 AEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTTKSETANTETSA 250
            + IP  +EVD+ +L +G  I + D+ +  ++++  K E   I  +  T +     E  A
Sbjct: 141 PDAIPQSLEVDLLDLAIGHSIHVSDLALPETMQVAMKEENPVIASVSATAAVEEAKEDGA 200

Query: 251 TSETSE 257
             E+++
Sbjct: 201 PEESAQ 206

[Close]

BLAST of Chy11G186960 vs. ExPASy Swiss-Prot
Match: Q5FFA2 (50S ribosomal protein L25 OS=Ehrlichia ruminantium (strain Gardel) OX=302409 GN=rplY PE=3 SV=2)

HSP 1 Score: 73.9 bits (180), Expect = 2.9e-12
Identity = 45/132 (34.09%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 127 ILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNKIRTSLK 186
           +L   I ++  T +I ++ F + D G+E+K++VP+VF  E+ C G++KGG LN +  +L 
Sbjct: 77  VLMRDIQKHPVTDRIQHVDFQFIDHGTEIKIEVPLVFVNEQRCVGVKKGGVLNILHRTLH 136

Query: 187 YLCPAEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTTKS--ETA 246
             C    I   IEVD++NL +G  I + D+++ S + ++ K     +  I  T S  +T+
Sbjct: 137 IKCLPNAILQSIEVDLANLTIGHSIHVSDLNLPSEVTVVMKEHNPTLVTISGTSSDQDTS 196

Query: 247 NTETSATSETSE 257
             E+S T+ TSE
Sbjct: 197 GGESSGTT-TSE 207

[Close]

BLAST of Chy11G186960 vs. ExPASy Swiss-Prot
Match: Q5HC84 (50S ribosomal protein L25 OS=Ehrlichia ruminantium (strain Welgevonden) OX=254945 GN=rplY PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.9e-12
Identity = 45/132 (34.09%), Postives = 77/132 (58.33%), Query Frame = 0


Query: 127 ILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNKIRTSLK 186
           +L   I ++  T +I ++ F + D G+E+K++VP+VF  E+ C G++KGG LN +  +L 
Sbjct: 77  VLMRDIQKHPVTDRIQHVDFQFIDHGTEIKIEVPLVFVNEQRCVGVKKGGVLNILHRTLH 136

Query: 187 YLCPAEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTTKS--ETA 246
             C    I   IEVD++NL +G  I + D+++ S + ++ K     +  I  T S  +T+
Sbjct: 137 IKCLPNAILQSIEVDLANLTIGHSIHVSDLNLPSEVTVVMKEHNPTLVTISGTSSDQDTS 196

Query: 247 NTETSATSETSE 257
             E+S T+ TSE
Sbjct: 197 GGESSGTT-TSE 207

[Close]

BLAST of Chy11G186960 vs. ExPASy TrEMBL
Match: A0A0A0LJM8 (Ribosomal_TL5_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G295950 PE=4 SV=1)

HSP 1 Score: 494.6 bits (1272), Expect = 2.6e-136
Identity = 253/258 (98.06%), Postives = 255/258 (98.84%), Query Frame = 0


Query: 1   MANWWRSAGTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60
           MANWWRSA TNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP
Sbjct: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRLKLQIRAGSGSSV 120
           AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTR KLQIRAGSGSSV
Sbjct: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120

Query: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180
           LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK
Sbjct: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180

Query: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTTK 240
           IRTSLKYLCPAEHIPSKIEVDVSNLD+GDRIFIRDVDVHSS+KLLSKNEVMPICKIVT K
Sbjct: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIK 240

Query: 241 SETANTETSATSETSETS 259
           SETANTETSATSETSETS
Sbjct: 241 SETANTETSATSETSETS 258

[Close]

BLAST of Chy11G186960 vs. ExPASy TrEMBL
Match: A0A1S3C6P2 (50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103497462 PE=4 SV=1)

HSP 1 Score: 481.1 bits (1237), Expect = 2.9e-132
Identity = 246/261 (94.25%), Postives = 251/261 (96.17%), Query Frame = 0


Query: 1   MANWWRSAGTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60
           MA WWRSAGTNLR A  SGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP
Sbjct: 1   MAKWWRSAGTNLRWAVLSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRLKLQIRAGSGSSV 120
           AVVFSQQ+LEKN VHGSPSRKHLLTTERKQIHSILKSV+LPFFCSTR +LQIRAGSGSSV
Sbjct: 61  AVVFSQQLLEKNPVHGSPSRKHLLTTERKQIHSILKSVKLPFFCSTRFQLQIRAGSGSSV 120

Query: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180
           LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK
Sbjct: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180

Query: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTTK 240
           IRTSLKYLCPAEHIPSKIEVDVSNLD+GDRIFIRDVDVH SLKLLSKNEVMPICKIVTTK
Sbjct: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHPSLKLLSKNEVMPICKIVTTK 240

Query: 241 SETANTETSATSETSETSETS 262
           S+T NTE S TSETSETSETS
Sbjct: 241 SKTENTEASETSETSETSETS 261

[Close]

BLAST of Chy11G186960 vs. ExPASy TrEMBL
Match: A0A6J1I2R7 (uncharacterized protein LOC111470391 OS=Cucurbita maxima OX=3661 GN=LOC111470391 PE=4 SV=1)

HSP 1 Score: 430.6 bits (1106), Expect = 4.6e-117
Identity = 217/253 (85.77%), Postives = 233/253 (92.09%), Query Frame = 0


Query: 1   MANWWRSAGTNLRLAAFSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 60
           MA WWRS GTNLRL A S  +SE FPFSS RAA YHTIQAIPRECSG +ISS+DRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRI 60

Query: 61  PAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRLKLQIRAGSGSS 120
           PAVVFSQQ+LEKNS+HGSPSRKHLLT ERKQIHSILKSVELPFFCSTRL+LQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180
           VLLESGSILPIK+HR+EETGKI N+VFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKVHRDEETGKILNMVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180

Query: 181 KIRTSLKYLCPAEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTT 240
           +IRTSL+YLCPAEHIPSKIEVDVSNL++G+RIFIRD+DVH SLKLLSKNEVMPICKIVTT
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 KSETANTETSATS 253
             + A TE S  S
Sbjct: 241 IQKPAITEASEPS 253

[Close]

BLAST of Chy11G186960 vs. ExPASy TrEMBL
Match: A0A6J1EJW5 (uncharacterized protein LOC111434985 OS=Cucurbita moschata OX=3662 GN=LOC111434985 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 6.6e-116
Identity = 214/253 (84.58%), Postives = 232/253 (91.70%), Query Frame = 0


Query: 1   MANWWRSAGTNLRLAAFSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 60
           MA WWRS GTNLRL A S  +SE FPFSS RAA YHTIQAIPRECSG +IS++DRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60

Query: 61  PAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRLKLQIRAGSGSS 120
           PAVVFSQQ+LEKNS+HGSPSRKHLLT ERKQIHSILKSVELPFFCSTRL+LQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180
           VLLESGSILPIK+HR+EETGKI N+VFVWA+EGSELKVDVPIVFKGEE CPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180

Query: 181 KIRTSLKYLCPAEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTT 240
           +IRTSL+YLCPAEHIPSKIEVDVSNL++G+RIFIRD+DVH SLKLLSKNEVMPICKIVTT
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 KSETANTETSATS 253
             + A TE S  S
Sbjct: 241 NLKPAITEASLPS 253

[Close]

BLAST of Chy11G186960 vs. ExPASy TrEMBL
Match: A0A6J1DRT2 (uncharacterized protein LOC111022615 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022615 PE=4 SV=1)

HSP 1 Score: 417.2 bits (1071), Expect = 5.2e-113
Identity = 212/245 (86.53%), Postives = 225/245 (91.84%), Query Frame = 0


Query: 1   MANWWRSAGTNLRLAAFSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 60
           MA WWRSAG N RLAA S   SE F   SFRAA YHTIQAIPRECSG +IS++DRAQGRI
Sbjct: 1   MAKWWRSAGINPRLAALSRATSEPFSSPSFRAALYHTIQAIPRECSGSRISNRDRAQGRI 60

Query: 61  PAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRLKLQIRAGSGSS 120
           PAVVFSQQ+LEKNSVHGS SRKHLLTTERKQIHSILKSVELPFFCSTRL+LQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSVHGSSSRKHLLTTERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180
           VLLESGSILPIKIHR+EETGKI N+VFVWADEGSELKVDVPIVFKGEEACPGL KGGQLN
Sbjct: 121 VLLESGSILPIKIHRDEETGKILNMVFVWADEGSELKVDVPIVFKGEEACPGLLKGGQLN 180

Query: 181 KIRTSLKYLCPAEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTT 240
           +IRTSL+YLCPAEHIPSKIEVDVS LD+G+RIFIRDVDVH SLKLLSKNEVMPICKIV T
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSKLDIGERIFIRDVDVHPSLKLLSKNEVMPICKIVAT 240

Query: 241 KSETA 245
            +E+A
Sbjct: 241 NTESA 245

[Close]

BLAST of Chy11G186960 vs. NCBI nr
Match: XP_004148437.1 (uncharacterized protein LOC101208580 [Cucumis sativus] >KGN62070.1 hypothetical protein Csa_006311 [Cucumis sativus])

HSP 1 Score: 496 bits (1278), Expect = 1.00e-176
Identity = 253/258 (98.06%), Postives = 255/258 (98.84%), Query Frame = 0


Query: 1   MANWWRSAGTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60
           MANWWRSA TNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP
Sbjct: 1   MANWWRSARTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRLKLQIRAGSGSSV 120
           AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTR KLQIRAGSGSSV
Sbjct: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRFKLQIRAGSGSSV 120

Query: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180
           LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK
Sbjct: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180

Query: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTTK 240
           IRTSLKYLCPAEHIPSKIEVDVSNLD+GDRIFIRDVDVHSS+KLLSKNEVMPICKIVT K
Sbjct: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHSSMKLLSKNEVMPICKIVTIK 240

Query: 241 SETANTETSATSETSETS 258
           SETANTETSATSETSETS
Sbjct: 241 SETANTETSATSETSETS 258

[Close]

BLAST of Chy11G186960 vs. NCBI nr
Match: XP_008457885.1 (PREDICTED: 50S ribosomal protein L25 [Cucumis melo])

HSP 1 Score: 483 bits (1242), Expect = 3.84e-171
Identity = 246/261 (94.25%), Postives = 251/261 (96.17%), Query Frame = 0


Query: 1   MANWWRSAGTNLRLAAFSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60
           MA WWRSAGTNLR A  SGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP
Sbjct: 1   MAKWWRSAGTNLRWAVLSGTKSESFPFSSFRAAYHTIQAIPRECSGRKISSKDRAQGRIP 60

Query: 61  AVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRLKLQIRAGSGSSV 120
           AVVFSQQ+LEKN VHGSPSRKHLLTTERKQIHSILKSV+LPFFCSTR +LQIRAGSGSSV
Sbjct: 61  AVVFSQQLLEKNPVHGSPSRKHLLTTERKQIHSILKSVKLPFFCSTRFQLQIRAGSGSSV 120

Query: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180
           LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK
Sbjct: 121 LLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNK 180

Query: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTTK 240
           IRTSLKYLCPAEHIPSKIEVDVSNLD+GDRIFIRDVDVH SLKLLSKNEVMPICKIVTTK
Sbjct: 181 IRTSLKYLCPAEHIPSKIEVDVSNLDIGDRIFIRDVDVHPSLKLLSKNEVMPICKIVTTK 240

Query: 241 SETANTETSATSETSETSETS 261
           S+T NTE S TSETSETSETS
Sbjct: 241 SKTENTEASETSETSETSETS 261

[Close]

BLAST of Chy11G186960 vs. NCBI nr
Match: XP_022971722.1 (uncharacterized protein LOC111470391 [Cucurbita maxima])

HSP 1 Score: 432 bits (1111), Expect = 2.36e-151
Identity = 216/250 (86.40%), Postives = 232/250 (92.80%), Query Frame = 0


Query: 1   MANWWRSAGTNLRLAAFSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 60
           MA WWRS GTNLRL A S  +SE FPFSS RAA YHTIQAIPRECSG +ISS+DRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISSRDRAQGRI 60

Query: 61  PAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRLKLQIRAGSGSS 120
           PAVVFSQQ+LEKNS+HGSPSRKHLLT ERKQIHSILKSVELPFFCSTRL+LQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180
           VLLESGSILPIK+HR+EETGKI N+VFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKVHRDEETGKILNMVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180

Query: 181 KIRTSLKYLCPAEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTT 240
           +IRTSL+YLCPAEHIPSKIEVDVSNL++G+RIFIRD+DVH SLKLLSKNEVMPICKIVTT
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 KSETANTETS 249
             + A TE S
Sbjct: 241 IQKPAITEAS 250

[Close]

BLAST of Chy11G186960 vs. NCBI nr
Match: XP_022928099.1 (uncharacterized protein LOC111434985 [Cucurbita moschata] >KAG6571398.1 hypothetical protein SDJN03_30313, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 428 bits (1101), Expect = 7.88e-150
Identity = 213/250 (85.20%), Postives = 231/250 (92.40%), Query Frame = 0


Query: 1   MANWWRSAGTNLRLAAFSGTKSESFPFSSFRAA-YHTIQAIPRECSGRKISSKDRAQGRI 60
           MA WWRS GTNLRL A S  +SE FPFSS RAA YHTIQAIPRECSG +IS++DRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRAASYHTIQAIPRECSGSRISTRDRAQGRI 60

Query: 61  PAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRLKLQIRAGSGSS 120
           PAVVFSQQ+LEKNS+HGSPSRKHLLT ERKQIHSILKSVELPFFCSTRL+LQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVELPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180
           VLLESGSILPIK+HR+EETGKI N+VFVWA+EGSELKVDVPIVFKGEE CPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKVHRDEETGKILNMVFVWAEEGSELKVDVPIVFKGEETCPGLQKGGQLN 180

Query: 181 KIRTSLKYLCPAEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTT 240
           +IRTSL+YLCPAEHIPSKIEVDVSNL++G+RIFIRD+DVH SLKLLSKNEVMPICKIVTT
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 KSETANTETS 249
             + A TE S
Sbjct: 241 NLKPAITEAS 250

[Close]

BLAST of Chy11G186960 vs. NCBI nr
Match: XP_023512718.1 (uncharacterized protein LOC111777386 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 428 bits (1100), Expect = 1.12e-149
Identity = 212/250 (84.80%), Postives = 231/250 (92.40%), Query Frame = 0


Query: 1   MANWWRSAGTNLRLAAFSGTKSESFPFSSFRA-AYHTIQAIPRECSGRKISSKDRAQGRI 60
           MA WWRS GTNLRL A S  +SE FPFSS RA +YHTIQAIPRECSG +IS++DRAQGRI
Sbjct: 1   MAKWWRSTGTNLRLLALSSARSEPFPFSSSRATSYHTIQAIPRECSGSRISTRDRAQGRI 60

Query: 61  PAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRLKLQIRAGSGSS 120
           PAVVFSQQ+LEKNS+HGSPSRKHLLT ERKQIHSILKSV+LPFFCSTRL+LQIRAGSGSS
Sbjct: 61  PAVVFSQQLLEKNSIHGSPSRKHLLTAERKQIHSILKSVDLPFFCSTRLQLQIRAGSGSS 120

Query: 121 VLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLN 180
           VLLESGSILPIK+HR+EETGKI N+VFVWADEGSELKVDVPIVFKGEE CPGLQKGGQLN
Sbjct: 121 VLLESGSILPIKVHRDEETGKILNMVFVWADEGSELKVDVPIVFKGEETCPGLQKGGQLN 180

Query: 181 KIRTSLKYLCPAEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTT 240
           +IRTSL+YLCPAEHIPSKIEVDVSNL++G+RIFIRD+DVH SLKLLSKNEVMPICKIVTT
Sbjct: 181 RIRTSLRYLCPAEHIPSKIEVDVSNLEIGERIFIRDIDVHPSLKLLSKNEVMPICKIVTT 240

Query: 241 KSETANTETS 249
             + A TE S
Sbjct: 241 NPKPAITEAS 250

[Close]

BLAST of Chy11G186960 vs. TAIR 10
Match: AT5G66860.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 287.3 bits (734), Expect = 1.2e-77
Identity = 148/241 (61.41%), Postives = 180/241 (74.69%), Query Frame = 0


Query: 1   MANWWRSAGTNLRLAAFSGTKSESFPFSSFRA--AYHTIQAIPRECSGRKISSKDRAQGR 60
           MA WWR  G     A  +   + SF   S R    Y TIQAIPRE +GR +S++DR  GR
Sbjct: 1   MAKWWR--GLRSVTAEVADLPASSFG-RSIRCIHQYQTIQAIPREATGRGVSARDRTIGR 60

Query: 61  IPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSILKSVELPFFCSTRLKLQIRAGSGS 120
           IPAVVF Q +L+ ++     SRK LLT ++KQI SI+ SV LPFFCST  +LQIRAG GS
Sbjct: 61  IPAVVFPQSLLDTDASKRGVSRKQLLTADKKQIKSIIDSVGLPFFCSTTFQLQIRAGQGS 120

Query: 121 SVLLESGSILPIKIHRNEETGKIFNIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQL 180
           S L+ESG +LP+K+HR+EETGKI N+VFVWAD+G +LKVDVP+VFKG + CPGLQKGG L
Sbjct: 121 STLVESGRVLPLKVHRDEETGKILNLVFVWADDGEKLKVDVPVVFKGLDHCPGLQKGGNL 180

Query: 181 NKIRTSLKYLCPAEHIPSKIEVDVSNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVT 240
             IR++LK L PAEHIPSKIEVDVSNLD+ D++ ++DV  H SLKLLSKNE MP+CKIV 
Sbjct: 181 RTIRSTLKLLGPAEHIPSKIEVDVSNLDIEDKVLLQDVVFHPSLKLLSKNETMPVCKIVA 238

[Close]

BLAST of Chy11G186960 vs. TAIR 10
Match: AT4G23620.1 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-37
Identity = 83/218 (38.07%), Postives = 132/218 (60.55%), Query Frame = 0


Query: 36  TIQAIPRECSGRKISSKDRAQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSIL 95
           TI A+PR  SG+ IS+K+R  GR+P+++F Q+    +  HG    K L++ +  QI  ++
Sbjct: 53  TILAVPRSVSGKSISAKERKAGRVPSIIFEQE----DGQHG--GNKRLISVQTNQIRKLV 112

Query: 96  KSVELPFFCSTRLKLQIRAGSGSSVLLESGSILPIKIHRNEETGKIFNIVFVWADEGSEL 155
             +   FF S    +++RA  GS  ++E    LP  IH +  T    N+ F+ A  G+ L
Sbjct: 113 NHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAIHLHSGTDAPLNVTFIRAPPGALL 172

Query: 156 KVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPAEHIPSKIEVDVSNLDVGDRIFIRD 215
           KVD+P+VF G++  PGL+KG  LN I+ ++K+LCPAE IP  IEVD+S LD+G ++ + D
Sbjct: 173 KVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDLSQLDIGQKLVMGD 232

Query: 216 VDVHSSLKLLSKNEVMPICKIVTTKSETANTETSATSE 254
           + VH +LKL+ K++  PI K+   +      ++S T +
Sbjct: 233 LKVHPALKLI-KSKDEPIVKVAGGRVTDTQKKSSDTQK 263

[Close]

BLAST of Chy11G186960 vs. TAIR 10
Match: AT4G23620.2 (Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain )

HSP 1 Score: 150.2 bits (378), Expect = 2.3e-36
Identity = 85/231 (36.80%), Postives = 134/231 (58.01%), Query Frame = 0


Query: 36  TIQAIPRECSGRKISSKDRAQGRIPAVVFSQQILEKNSVHGSPSRKHLLTTERKQIHSIL 95
           TI A+PR  SG+ IS+K+R  GR+P+++F Q+    +  HG    K L++ +  QI  ++
Sbjct: 53  TILAVPRSVSGKSISAKERKAGRVPSIIFEQE----DGQHG--GNKRLISVQTNQIRKLV 112

Query: 96  KSVELPFFCSTRLKLQIRAGSGSSVLLESGSILP-------------IKIHRNEETGKIF 155
             +   FF S    +++RA  GS  ++E    LP             IKIH +  T    
Sbjct: 113 NHLGYSFFLSRLFDVEVRAEIGSDEVIEKVRALPRAVKSPFLSLMKLIKIHLHSGTDAPL 172

Query: 156 NIVFVWADEGSELKVDVPIVFKGEEACPGLQKGGQLNKIRTSLKYLCPAEHIPSKIEVDV 215
           N+ F+ A  G+ LKVD+P+VF G++  PGL+KG  LN I+ ++K+LCPAE IP  IEVD+
Sbjct: 173 NVTFIRAPPGALLKVDIPLVFIGDDVSPGLKKGASLNTIKRTVKFLCPAEIIPPYIEVDL 232

Query: 216 SNLDVGDRIFIRDVDVHSSLKLLSKNEVMPICKIVTTKSETANTETSATSE 254
           S LD+G ++ + D+ VH +LKL+ K++  PI K+   +      ++S T +
Sbjct: 233 SQLDIGQKLVMGDLKVHPALKLI-KSKDEPIVKVAGGRVTDTQKKSSDTQK 276

The following BLAST results are available for this feature:

BLAST of Chy11G186960 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q2GII5	7.7e-13	30.56	50S ribosomal protein L25 OS=Anaplasma phagocytophilum (strain HZ) OX=212042 GN=...	[more]
Q5GTJ0	1.0e-12	30.32	50S ribosomal protein L25 OS=Wolbachia sp. subsp. Brugia malayi (strain TRS) OX=...	[more]
Q5P9A5	2.9e-12	30.16	50S ribosomal protein L25 OS=Anaplasma marginale (strain St. Maries) OX=234826 G...	[more]
Q5FFA2	2.9e-12	34.09	50S ribosomal protein L25 OS=Ehrlichia ruminantium (strain Gardel) OX=302409 GN=...	[more]
Q5HC84	2.9e-12	34.09	50S ribosomal protein L25 OS=Ehrlichia ruminantium (strain Welgevonden) OX=25494...	[more]

BLAST of Chy11G186960 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LJM8	2.6e-136	98.06	Ribosomal_TL5_C domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G29...	[more]
A0A1S3C6P2	2.9e-132	94.25	50S ribosomal protein L25 OS=Cucumis melo OX=3656 GN=LOC103497462 PE=4 SV=1	[more]
A0A6J1I2R7	4.6e-117	85.77	uncharacterized protein LOC111470391 OS=Cucurbita maxima OX=3661 GN=LOC111470391...	[more]
A0A6J1EJW5	6.6e-116	84.58	uncharacterized protein LOC111434985 OS=Cucurbita moschata OX=3662 GN=LOC1114349...	[more]
A0A6J1DRT2	5.2e-113	86.53	uncharacterized protein LOC111022615 isoform X2 OS=Momordica charantia OX=3673 G...	[more]

BLAST of Chy11G186960 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148437.1	1.00e-176	98.06	uncharacterized protein LOC101208580 [Cucumis sativus] >KGN62070.1 hypothetical ...	[more]
XP_008457885.1	3.84e-171	94.25	PREDICTED: 50S ribosomal protein L25 [Cucumis melo]	[more]
XP_022971722.1	2.36e-151	86.40	uncharacterized protein LOC111470391 [Cucurbita maxima]	[more]
XP_022928099.1	7.88e-150	85.20	uncharacterized protein LOC111434985 [Cucurbita moschata] >KAG6571398.1 hypothet...	[more]
XP_023512718.1	1.12e-149	84.80	uncharacterized protein LOC111777386 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy11G186960 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G66860.1	1.2e-77	61.41	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]
AT4G23620.1	1.2e-37	38.07	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]
AT4G23620.2	2.3e-36	36.80	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR037121	Ribosomal protein L25, C-terminal	GENE3D	2.170.120.20	Ribosomal protein L25, beta domain	coord: 152..231 e-value: 2.9E-20 score: 74.2
IPR020057	Ribosomal protein L25, beta domain	PFAM	PF14693	Ribosomal_TL5_C	coord: 155..239 e-value: 1.9E-22 score: 79.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 242..261
None	No IPR available	PANTHER	PTHR33284	RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN	coord: 1..245
None	No IPR available	PANTHER	PTHR33284:SF2	RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN	coord: 1..245
IPR029751	Ribosomal protein L25	CDD	cd00495	Ribosomal_L25_TL5_CTC	coord: 36..112 e-value: 1.6554E-6 score: 43.2278
IPR011035	Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain superfamily	SUPERFAMILY	50715	Ribosomal protein L25-like	coord: 41..238

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy11G186960.1	Chy11G186960.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0008097	5S rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome