Chy10G185610 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G185610
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Protein LATERAL ROOT PRIMORDIUM 1
Location	chrH10: 17909169 .. 17910716 (+)
RNA-Seq Expression	Chy10G185610
Synteny	Chy10G185610

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCCACACCTTCTTCTCTTCACCAACAGACTCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTCCCCTCCTCCACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTCCCTCCCTCCCAGCCCCCGCCAAATAATCACACACCTGACGATGTTACCGATCGTACTCGCACTTTCGACAATCTTAAGAGAACCCAAGATTTTGGCTTTGGGAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAAAGGCGACGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCTGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCTTCCGGTTCTTCTTCTGCTGGTGCTAAAAGGCCCAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCCGCCGCTGCCGCTTCCAATTCCAATGCCACAACTCCCCGGAGCTTTGAAACAACCTCTAGCCATCAAGGTAAATCTCTCTCTAACTCTCTTTTTCCATTCTTCCCTTTTTGTTTTCTTGTGCTTCTCAACGAATTCCGAATCATGAGCAGAAATTAATGGGATATCTGTTTACTCTGTTTCTTTCTGTTTGATGATTTGGTTACTTGTTTCTTCGTGTATAATGTTAGATTACGAGAAATGTATTCTTATTCGGTCTCAAATTTGTAAGATTTTTATGAGTAGTTTTTGTTTTAGTTCCCTTTAAAGATCTTGCAGCAAATTTAACGAAACATGTTCATTAGGTATGTTGTTGGAAAACTTACAATCCTTTCATGTTATAACTCTGTTTTTTCTCATCTTTCTCTCTCCTTTCTCCAACAAGGAGGGAGTGACTTATATATAAAAGTCGAATTTAGGACCGTTTGTAAATGACATTTCGAGTGCTAAAAGATAAGGTTTTTTTTTTTTTTTTTTTTTTTTTGAAGTGTTTGTGTTTAGTAAGGAGCTTAAGTATTTAAAAAGGGGTTCAAGTGTTTAGAAAGTCATTCCAAACAGGCTTTGTGCTGTTAAAACATGCACATATATATGTATTCTACTGTGTTTTTTTAACAACAAGATCATTTTCTAAACCCACCTCTTGGAATTCTCCCGACTTTGAAACCAGATGCAAGCTTCAAGAAGTCATTACCGGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTTCTCTATGATCAAGGGGCTGATAACAAAAATGCATTCCCATCTATTTCACATCTCCATTTGGACAGTGGTAACCACCACAGGGAATAG

mRNA sequence

ATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCCACACCTTCTTCTCTTCACCAACAGACTCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTCCCCTCCTCCACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTCCCTCCCTCCCAGCCCCCGCCAAATAATCACACACCTGACGATGTTACCGATCGTACTCGCACTTTCGACAATCTTAAGAGAACCCAAGATTTTGGCTTTGGGAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAAAGGCGACGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCTGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCTTCCGGTTCTTCTTCTGCTGGTGCTAAAAGGCCCAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCCGCCGCTGCCGCTTCCAATTCCAATGCCACAACTCCCCGGAGCTTTGAAACAACCTCTAGCCATCAAGATCATTTTCTAAACCCACCTCTTGGAATTCTCCCGACTTTGAAACCAGATGCAAGCTTCAAGAAGTCATTACCGGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTTCTCTATGATCAAGGGGCTGATAACAAAAATGCATTCCCATCTATTTCACATCTCCATTTGGACAGTGGTAACCACCACAGGGAATAG

Coding sequence (CDS)

ATGTTGGGTCTCCGAGATGTTCTGTTTATAGCTCCCACACCTTCTTCTCTTCACCAACAGACTCAAATCATTTCTTCTGATCATCATCCATCTCTTCCTCTCCCCTCCTCCACCGCTCTCGGCGTTAGCGTCGGCATTTTCCCCCTTCTCGCTGCAACCCCATGTCTCCCTCCCTCCCAGCCCCCGCCAAATAATCACACACCTGACGATGTTACCGATCGTACTCGCACTTTCGACAATCTTAAGAGAACCCAAGATTTTGGCTTTGGGAAAGGAGAATCCTTGATCGCCGGTCCCGGAAATAATGGCTCCGACGAACATGTGAAAGGCGACGCTGGGGATGGCTCTATGGCTGTATGTAGGGACTGTGGAAACAGAGCAAAAAAGGAGTGCGAGTATCGGAGGTGCAGGACTTGTTGCAAGGGACGTGGGAATCATTGCTCTACGCACGTGAAGAGCACGTGGGTGCCTGCGGCTCGCCGCCGTGAGCGGCAGATGTTGGTGGTTATGGACGGCGTTGCCACTGCTAGTGGCGACGGAGGGTCTTCCGGTTCTTCTTCTGCTGGTGCTAAAAGGCCCAGAGTTTTGATTCCTTCACAGAGTGCTGCCGCCGCCGCTGCCGCTTCCAATTCCAATGCCACAACTCCCCGGAGCTTTGAAACAACCTCTAGCCATCAAGATCATTTTCTAAACCCACCTCTTGGAATTCTCCCGACTTTGAAACCAGATGCAAGCTTCAAGAAGTCATTACCGGGGCATGTTCGAGCTCCAGCCGTGTTCAGGTGCCATAGAGTGACTGCCATTAGCAGTGGTGAAGGTGAGTTAGCTTACCAAGCAACAGTCAATATTGGTGGTCATGTCTTCAAAGGCTTTCTCTATGATCAAGGGGCTGATAACAAAAATGCATTCCCATCTATTTCACATCTCCATTTGGACAGTGGTAACCACCACAGGGAATAG

Protein sequence

MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILPTLKPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADNKNAFPSISHLHLDSGNHHRE*

Homology

[Close]

BLAST of Chy10G185610 vs. ExPASy Swiss-Prot
Match: Q94CK9 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 4.2e-53
Identity = 141/324 (43.52%), Postives = 178/324 (54.94%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A        
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------G 62

Query: 61  PPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDG 120
            P  N    D+       R +  +N   TQ   F        G  +N S       +G  
Sbjct: 63  TPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGAS 122

Query: 121 SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVAT 180
             A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        
Sbjct: 123 GTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTG 182

Query: 181 ASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATT-PRSFETTSSHQDHFLNPPL 240
           A+   GSS S+S+G K+PR++   Q     A +  S + T P+SFET+SS QD       
Sbjct: 183 ANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQD------- 242

Query: 241 GILPTLKPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD 300
                       +++ PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYD
Sbjct: 243 --------GGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYD 291

Query: 301 QGADNKNAFPSISHLHL-DSGNHH 318
           QG + K  FPS+S LHL  S N+H
Sbjct: 303 QGLEPKEGFPSMSDLHLGGSANNH 291

[Close]

BLAST of Chy10G185610 vs. ExPASy Swiss-Prot
Match: O65517 (Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.7e-30
Identity = 81/181 (44.75%), Postives = 106/181 (58.56%), Query Frame = 0


Query: 120 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 179
           CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG 
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHM----STSGG 153

Query: 180 GGSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILPT 239
           GG SGS  AG       IP +        ++S++  P           H     +G    
Sbjct: 154 GGGSGSGGAGGGGSS--IPKRHRDPTLPGTSSSSRLP----------SHSAGLEMG---- 213

Query: 240 LKPDASFKKSLPGHVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGAD 299
              +ASF    PG V + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG +
Sbjct: 214 ---EASF----PGEVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPE 247

[Close]

BLAST of Chy10G185610 vs. ExPASy Swiss-Prot
Match: Q9M2U4 (Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=SRS6 PE=1 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.9e-30
Identity = 78/192 (40.62%), Postives = 102/192 (53.12%), Query Frame = 0


Query: 119 VCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASG 178
           VCRDCGNRAKKEC + RCRTCCK RG +C THVKSTW+P++  R                
Sbjct: 40  VCRDCGNRAKKECLFERCRTCCKSRGYNCVTHVKSTWIPSSATR---------------- 99

Query: 179 DGGSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILP 238
                 SSS   ++ ++ I  QS                             +P + +LP
Sbjct: 100 -----SSSSPSERKKKLKIDKQS-----------------------------SPNVSLLP 159

Query: 239 TL--KPDASFKKSLPGHVRAPAVFRCHRVTAISSGE-GELAYQATVNIGGHVFKGFLYDQ 298
           T   + +  F++ LPG + APAVF+  RVTAIS+ E  E+ YQATV I GH+FKGFL+  
Sbjct: 160 TTTSRQERGFREGLPGKIEAPAVFKRTRVTAISNNEQAEIGYQATVTISGHIFKGFLHYY 181

Query: 299 GADNKNAFPSIS 308
           G D+  AFP +S
Sbjct: 220 GVDHNKAFPCLS 181

[Close]

BLAST of Chy10G185610 vs. ExPASy Swiss-Prot
Match: Q9SD40 (Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 8.0e-28
Identity = 95/285 (33.33%), Postives = 126/285 (44.21%), Query Frame = 0


Query: 18  HQQTQII--SSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQPPPNNHTPDDVTDRT 77
           H Q +I+     H   L L SS A G+ VG                 P+NH   D++   
Sbjct: 75  HNQQEIMFQHQQHQQRLDLYSSAA-GLGVG-----------------PSNHNQFDIS--- 134

Query: 78  RTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVK-GDAGDGSMAV-CRDCGNRAKKECEY 137
                           GE+  AG G   +   ++ G +G GS  V C+DCGN+AKK+C +
Sbjct: 135 ----------------GETSTAGAGRAAAMMMIRSGGSGGGSGGVSCQDCGNQAKKDCSH 194

Query: 138 RRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRP 197
            RCRTCCK RG  CSTHV+STWVPAA+RRERQ  +                         
Sbjct: 195 MRCRTCCKSRGFECSTHVRSTWVPAAKRRERQQQL------------------------- 254

Query: 198 RVLIPSQSAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILPTLKPDASFKK--SLP 257
                        A        PR       H+++       ++ T  P  S  +  + P
Sbjct: 255 -------------ATVQPQTQLPRGESVPKRHRENLPATSSSLVCTRIPSHSGLEVGNFP 284

Query: 258 GHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQG 297
             V + AVFRC RV+++  GE E AYQ  V+IGGH+FKG LYD G
Sbjct: 315 AEVSSSAVFRCVRVSSVEDGEEEFAYQTAVSIGGHIFKGILYDLG 284

[Close]

BLAST of Chy10G185610 vs. ExPASy Swiss-Prot
Match: K4B6C9 (Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.0e-26
Identity = 82/220 (37.27%), Postives = 111/220 (50.45%), Query Frame = 0


Query: 86  DFGFGKGES-----LIAGPGNNGSDEHVKGDAGDGSMAVCRDCGNRAKKECEYRRCRTCC 145
           D G G G S     + AG         V   +G G ++ C+DCGN+AKK+C++ RCRTCC
Sbjct: 91  DVGLGVGPSRSGFDISAGDHEASRSGFVMMRSGGGGIS-CQDCGNQAKKDCQHMRCRTCC 150

Query: 146 KGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDGGSSGSSSAGAKRPRVLIPSQ 205
           K RG  C THVKSTWVPAA+RRERQ  +           G ++ +++   KR R    + 
Sbjct: 151 KSRGFQCQTHVKSTWVPAAKRRERQQQL---AALQQQQQGHNNNNNNHKNKRQREDPSAS 210

Query: 206 SAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILPTLKPDASFKKSLPGHVRAPAVF 265
           S  +    SN+N      F                               P  VR  AVF
Sbjct: 211 SLVSTRLPSNTNGLEVGKF-------------------------------PSKVRTSAVF 270

Query: 266 RCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADNK 301
           +C ++++I   E +LAYQA V+IGGHVFKG LYDQG +++
Sbjct: 271 QCIQMSSIEDDEDQLAYQAAVSIGGHVFKGILYDQGHESQ 275

[Close]

BLAST of Chy10G185610 vs. ExPASy TrEMBL
Match: A0A5D3CCT8 (Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G003120 PE=3 SV=1)

HSP 1 Score: 628.2 bits (1619), Expect = 1.8e-176
Identity = 314/319 (98.43%), Postives = 315/319 (98.75%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILPTL 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAAS SNATTPRSFETTSSHQD FLNPPLGIL TL
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDQFLNPPLGILMTL 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADNK 300
           KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGAD+K
Sbjct: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLDSGNHHRE 320
           NAFPSISHLHLDSGNHHRE
Sbjct: 301 NAFPSISHLHLDSGNHHRE 319

[Close]

BLAST of Chy10G185610 vs. ExPASy TrEMBL
Match: A0A0A0KWX6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623840 PE=3 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 1.9e-165
Identity = 301/319 (94.36%), Postives = 302/319 (94.67%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILPTL 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAAS SNATTPRSFETTSSHQ              
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQ-------------- 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADNK 300
             DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGAD+K
Sbjct: 241 --DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLDSGNHHRE 320
           NAFPSISHLHLDSGNHHRE
Sbjct: 301 NAFPSISHLHLDSGNHHRE 303

[Close]

BLAST of Chy10G185610 vs. ExPASy TrEMBL
Match: A0A1S3BFS5 (protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103489517 PE=3 SV=1)

HSP 1 Score: 590.1 bits (1520), Expect = 5.5e-165
Identity = 300/319 (94.04%), Postives = 301/319 (94.36%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILPTL 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAAS SNATTPRSFETTSSHQ              
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQ-------------- 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADNK 300
             DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGAD+K
Sbjct: 241 --DASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLDSGNHHRE 320
           NAFPSISHLHLDSGNHHRE
Sbjct: 301 NAFPSISHLHLDSGNHHRE 303

[Close]

BLAST of Chy10G185610 vs. ExPASy TrEMBL
Match: A0A6J1GXY1 (protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC111458506 PE=3 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.8e-137
Identity = 260/319 (81.50%), Postives = 278/319 (87.15%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL   Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL---Q 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPP N  PD+++DR+R+ +NLKRTQDFGFGKG+SLI G GN+G D+ VKGD GDGS+ VC
Sbjct: 61  PPP-NQMPDELSDRSRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS---- 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILPTL 240
           GSSGSSSAGAKRP+VLIPSQ+ AAAAAAS SNATTPRSFETTSSHQ              
Sbjct: 181 GSSGSSSAGAKRPKVLIPSQTTAAAAAASTSNATTPRSFETTSSHQ-------------- 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADNK 300
             DASFKKSLPG V+APAVF+CHRVTAISSGEGEL YQATVNIGGHVFKGFLYDQGAD K
Sbjct: 241 --DASFKKSLPGQVQAPAVFKCHRVTAISSGEGELTYQATVNIGGHVFKGFLYDQGADVK 295

Query: 301 NAFPSISHLHLDSGNHHRE 320
           NA PSISHLHL+SGNH R+
Sbjct: 301 NALPSISHLHLESGNHLRD 295

[Close]

BLAST of Chy10G185610 vs. ExPASy TrEMBL
Match: A0A6J1CEG6 (protein LATERAL ROOT PRIMORDIUM 1 OS=Momordica charantia OX=3673 GN=LOC111009988 PE=3 SV=1)

HSP 1 Score: 492.3 bits (1266), Expect = 1.6e-135
Identity = 266/325 (81.85%), Postives = 278/325 (85.54%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQ-TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPS 60
           MLGLRDVLFIAPTPSSLHQQ TQIISSDHHPSLPLPSS ALGVSVGIFPLLAATPCLP  
Sbjct: 5   MLGLRDVLFIAPTPSSLHQQTTQIISSDHHPSLPLPSSAALGVSVGIFPLLAATPCLP-- 64

Query: 61  QPPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAV 120
           QPPP      +V++R R  DNLKRTQDFGFGKG+SLIAG GNN  DE V+GDAGD SM V
Sbjct: 65  QPPPPPPPAAEVSER-RGVDNLKRTQDFGFGKGDSLIAG-GNNALDEPVRGDAGDSSMGV 124

Query: 121 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 180
           CRDCGNRAKKEC+YRRCRTCCKGRGNHCSTHVKSTWV AARRRERQMLVVMDGVATASGD
Sbjct: 125 CRDCGNRAKKECDYRRCRTCCKGRGNHCSTHVKSTWVSAARRRERQMLVVMDGVATASGD 184

Query: 181 GGSSGSSSAGAKRPRVLIPSQSAAAAAA-----ASNSNATTPRSFETTSSHQDHFLNPPL 240
           GGSSGSSSAGAKRPRVLIPSQS AAAAA     AS SNATTPRSFET+S+HQ        
Sbjct: 185 GGSSGSSSAGAKRPRVLIPSQSTAAAAAASASHASTSNATTPRSFETSSNHQ-------- 244

Query: 241 GILPTLKPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD 300
                   DASFKKSLPG VRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD
Sbjct: 245 --------DASFKKSLPGQVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD 304

Query: 301 QGADNKNAFPSISHLHLDSGNHHRE 320
           QG D+KN FPS+SHLHL+SGNHH +
Sbjct: 305 QGIDDKNGFPSVSHLHLESGNHHHK 309

[Close]

BLAST of Chy10G185610 vs. NCBI nr
Match: KAA0034761.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK09315.1 protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa])

HSP 1 Score: 625 bits (1611), Expect = 1.73e-225
Identity = 314/319 (98.43%), Postives = 315/319 (98.75%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILPTL 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAAS SNATTPRSFETTSSHQD FLNPPLGIL TL
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQDQFLNPPLGILMTL 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADNK 300
           KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGAD+K
Sbjct: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLDSGNHHRE 319
           NAFPSISHLHLDSGNHHRE
Sbjct: 301 NAFPSISHLHLDSGNHHRE 319

[Close]

BLAST of Chy10G185610 vs. NCBI nr
Match: XP_004142483.1 (protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN52321.1 hypothetical protein Csa_008495 [Cucumis sativus])

HSP 1 Score: 589 bits (1518), Expect = 1.43e-211
Identity = 301/319 (94.36%), Postives = 302/319 (94.67%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILPTL 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAAS SNATTPRSFETTSSHQD             
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQD------------- 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADNK 300
              ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGAD+K
Sbjct: 241 ---ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLDSGNHHRE 319
           NAFPSISHLHLDSGNHHRE
Sbjct: 301 NAFPSISHLHLDSGNHHRE 303

[Close]

BLAST of Chy10G185610 vs. NCBI nr
Match: XP_008446964.1 (PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo])

HSP 1 Score: 587 bits (1514), Expect = 5.82e-211
Identity = 300/319 (94.04%), Postives = 301/319 (94.36%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLI GPGNNGSDEHVKGDAGDGSMAVC
Sbjct: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIGGPGNNGSDEHVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILPTL 240
           GSSGSSSAGAKRPRVLIPSQSAAAAAAAS SNATTPRSFETTSSHQD             
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASTSNATTPRSFETTSSHQD------------- 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADNK 300
              ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGAD+K
Sbjct: 241 ---ASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLDSGNHHRE 319
           NAFPSISHLHLDSGNHHRE
Sbjct: 301 NAFPSISHLHLDSGNHHRE 303

[Close]

BLAST of Chy10G185610 vs. NCBI nr
Match: XP_038892899.1 (protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida])

HSP 1 Score: 542 bits (1397), Expect = 3.79e-193
Identity = 281/319 (88.09%), Postives = 289/319 (90.60%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSS ALGVSVGIFPLL ATPCLPP Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSAALGVSVGIFPLLTATPCLPPPQ 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           P PN  T DDVTDR+R+ +NLKRTQDFGFGKG+SL+ G GNN SDE VKGDAGDGSMAVC
Sbjct: 61  PLPNQ-TADDVTDRSRSLENLKRTQDFGFGKGDSLMGGAGNNVSDEQVKGDAGDGSMAVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILPTL 240
           GSSGSSSAGAKRPRVLIPSQS AAAAAAS SNATTPRSFETTSSHQD             
Sbjct: 181 GSSGSSSAGAKRPRVLIPSQSTAAAAAASTSNATTPRSFETTSSHQD------------- 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADNK 300
              ASFKKSLPGHVRAPAVFRCHRVTAI+SGEGELAYQATVNIGGHVFKGFLYDQGAD+K
Sbjct: 241 ---ASFKKSLPGHVRAPAVFRCHRVTAINSGEGELAYQATVNIGGHVFKGFLYDQGADDK 300

Query: 301 NAFPSISHLHLDSGNHHRE 319
           NAFPSISHLHLDSGNHHR+
Sbjct: 301 NAFPSISHLHLDSGNHHRD 302

[Close]

BLAST of Chy10G185610 vs. NCBI nr
Match: XP_022956997.1 (protein LATERAL ROOT PRIMORDIUM 1-like [Cucurbita moschata])

HSP 1 Score: 495 bits (1275), Expect = 1.12e-174
Identity = 260/319 (81.50%), Postives = 278/319 (87.15%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           MLGLRDVLFIAPTPSSLHQ TQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL   Q
Sbjct: 1   MLGLRDVLFIAPTPSSLHQHTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCL---Q 60

Query: 61  PPPNNHTPDDVTDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDGSMAVC 120
           PPPN   PD+++DR+R+ +NLKRTQDFGFGKG+SLI G GN+G D+ VKGD GDGS+ VC
Sbjct: 61  PPPNQ-MPDELSDRSRSLENLKRTQDFGFGKGDSLIGGGGNHGYDDQVKGDGGDGSLGVC 120

Query: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGDG 180
           RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPA+RRRERQMLVVMDGVAT+    
Sbjct: 121 RDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPASRRRERQMLVVMDGVATS---- 180

Query: 181 GSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILPTL 240
           GSSGSSSAGAKRP+VLIPSQ+ AAAAAAS SNATTPRSFETTSSHQD             
Sbjct: 181 GSSGSSSAGAKRPKVLIPSQTTAAAAAASTSNATTPRSFETTSSHQD------------- 240

Query: 241 KPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYDQGADNK 300
              ASFKKSLPG V+APAVF+CHRVTAISSGEGEL YQATVNIGGHVFKGFLYDQGAD K
Sbjct: 241 ---ASFKKSLPGQVQAPAVFKCHRVTAISSGEGELTYQATVNIGGHVFKGFLYDQGADVK 295

Query: 301 NAFPSISHLHLDSGNHHRE 319
           NA PSISHLHL+SGNH R+
Sbjct: 301 NALPSISHLHLESGNHLRD 295

[Close]

BLAST of Chy10G185610 vs. TAIR 10
Match: AT5G12330.2 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 209.9 bits (533), Expect = 3.0e-54
Identity = 141/324 (43.52%), Postives = 178/324 (54.94%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A        
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------G 62

Query: 61  PPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDG 120
            P  N    D+       R +  +N   TQ   F        G  +N S       +G  
Sbjct: 63  TPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGAS 122

Query: 121 SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVAT 180
             A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        
Sbjct: 123 GTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTG 182

Query: 181 ASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATT-PRSFETTSSHQDHFLNPPL 240
           A+   GSS S+S+G K+PR++   Q     A +  S + T P+SFET+SS QD       
Sbjct: 183 ANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQD------- 242

Query: 241 GILPTLKPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD 300
                       +++ PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYD
Sbjct: 243 --------GGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYD 291

Query: 301 QGADNKNAFPSISHLHL-DSGNHH 318
           QG + K  FPS+S LHL  S N+H
Sbjct: 303 QGLEPKEGFPSMSDLHLGGSANNH 291

[Close]

BLAST of Chy10G185610 vs. TAIR 10
Match: AT5G12330.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 209.9 bits (533), Expect = 3.0e-54
Identity = 141/324 (43.52%), Postives = 178/324 (54.94%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A        
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------G 62

Query: 61  PPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDG 120
            P  N    D+       R +  +N   TQ   F        G  +N S       +G  
Sbjct: 63  TPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGAS 122

Query: 121 SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVAT 180
             A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        
Sbjct: 123 GTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTG 182

Query: 181 ASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATT-PRSFETTSSHQDHFLNPPL 240
           A+   GSS S+S+G K+PR++   Q     A +  S + T P+SFET+SS QD       
Sbjct: 183 ANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQD------- 242

Query: 241 GILPTLKPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD 300
                       +++ PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYD
Sbjct: 243 --------GGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYD 291

Query: 301 QGADNKNAFPSISHLHL-DSGNHH 318
           QG + K  FPS+S LHL  S N+H
Sbjct: 303 QGLEPKEGFPSMSDLHLGGSANNH 291

[Close]

BLAST of Chy10G185610 vs. TAIR 10
Match: AT5G12330.4 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 209.9 bits (533), Expect = 3.0e-54
Identity = 141/324 (43.52%), Postives = 178/324 (54.94%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A        
Sbjct: 90  MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------G 149

Query: 61  PPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDG 120
            P  N    D+       R +  +N   TQ   F        G  +N S       +G  
Sbjct: 150 TPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGAS 209

Query: 121 SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVAT 180
             A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        
Sbjct: 210 GTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTG 269

Query: 181 ASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATT-PRSFETTSSHQDHFLNPPL 240
           A+   GSS S+S+G K+PR++   Q     A +  S + T P+SFET+SS QD       
Sbjct: 270 ANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQD------- 329

Query: 241 GILPTLKPDASFKKSLPGHVRAPAVFRCHRVTAISSGEGELAYQATVNIGGHVFKGFLYD 300
                       +++ PG VRA AVF+C RVTA+  G+ E AYQA V IGGHVFKGFLYD
Sbjct: 330 --------GGGSREAWPGQVRAAAVFKCVRVTAVEDGDDEYAYQAVVKIGGHVFKGFLYD 378

Query: 301 QGADNKNAFPSISHLHL-DSGNHH 318
           QG + K  FPS+S LHL  S N+H
Sbjct: 390 QGLEPKEGFPSMSDLHLGGSANNH 378

[Close]

BLAST of Chy10G185610 vs. TAIR 10
Match: AT4G36260.1 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 134.8 bits (338), Expect = 1.2e-31
Identity = 81/181 (44.75%), Postives = 106/181 (58.56%), Query Frame = 0


Query: 120 CRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVATASGD 179
           CRDCGN+AKK+C + RCRTCCK RG  CSTHV+STW+P ARRRERQ  + M    + SG 
Sbjct: 94  CRDCGNQAKKDCTHMRCRTCCKSRGFDCSTHVRSTWIPVARRRERQQQLHM----STSGG 153

Query: 180 GGSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATTPRSFETTSSHQDHFLNPPLGILPT 239
           GG SGS  AG       IP +        ++S++  P           H     +G    
Sbjct: 154 GGGSGSGGAGGGGSS--IPKRHRDPTLPGTSSSSRLP----------SHSAGLEMG---- 213

Query: 240 LKPDASFKKSLPGHVRAPAVFRCHRVTAI-SSGEGELAYQATVNIGGHVFKGFLYDQGAD 299
              +ASF    PG V + A+FRC +++ +   G+G+ AYQ TVNIGGH+FKG LYDQG +
Sbjct: 214 ---EASF----PGEVSSDALFRCVKMSGVDDGGDGQYAYQTTVNIGGHLFKGILYDQGPE 247

[Close]

BLAST of Chy10G185610 vs. TAIR 10
Match: AT5G12330.3 (Lateral root primordium (LRP) protein-related )

HSP 1 Score: 131.0 bits (328), Expect = 1.8e-30
Identity = 96/235 (40.85%), Postives = 124/235 (52.77%), Query Frame = 0


Query: 1   MLGLRDVLFIAPTPSSLHQQTQIISSDHHPSLPLPSSTALGVSVGIFPLLAATPCLPPSQ 60
           M+GLRDV  +A  P+  HQ   +IS   H +    ++ ALG  VG+ PLL A        
Sbjct: 3   MVGLRDVFLVA--PAYHHQNAGVISGSDHMNSNAAAAAALG--VGVIPLLTA-------G 62

Query: 61  PPPNNHTPDDV-----TDRTRTFDNLKRTQDFGFGKGESLIAGPGNNGSDEHVKGDAGDG 120
            P  N    D+       R +  +N   TQ   F        G  +N S       +G  
Sbjct: 63  TPQQNVEDSDINFLGNNRRWQNNNNNHETQYLHFKSTNQTTVGTSSNNSG----SGSGAS 122

Query: 121 SMAVCRDCGNRAKKECEYRRCRTCCKGRGNHCSTHVKSTWVPAARRRERQMLVVMDGVAT 180
             A C+DCGN+AKKEC+ RRCRTCCK RG  CSTHVKSTWV AARRRERQ++        
Sbjct: 123 GTATCQDCGNQAKKECKQRRCRTCCKSRGFDCSTHVKSTWVSAARRRERQVM-----PTG 182

Query: 181 ASGDGGSSGSSSAGAKRPRVLIPSQSAAAAAAASNSNATT-PRSFETTSSHQDHF 230
           A+   GSS S+S+G K+PR++   Q     A +  S + T P+SFET+SS Q  F
Sbjct: 183 ANPTAGSSLSTSSGTKKPRIVGSQQQQQQQATSHTSTSNTPPQSFETSSSRQGSF 217

The following BLAST results are available for this feature:

BLAST of Chy10G185610 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94CK9	4.2e-53	43.52	Protein LATERAL ROOT PRIMORDIUM 1 OS=Arabidopsis thaliana OX=3702 GN=LRP1 PE=1 S...	[more]
O65517	1.7e-30	44.75	Protein SHI RELATED SEQUENCE 2 OS=Arabidopsis thaliana OX=3702 GN=SRS2 PE=1 SV=1	[more]
Q9M2U4	2.9e-30	40.63	Protein SHI RELATED SEQUENCE 6 OS=Arabidopsis thaliana OX=3702 GN=SRS6 PE=1 SV=1	[more]
Q9SD40	8.0e-28	33.33	Protein SHI RELATED SEQUENCE 1 OS=Arabidopsis thaliana OX=3702 GN=SRS1 PE=1 SV=2	[more]
K4B6C9	2.0e-26	37.27	Protein EXPRESSION OF TERPENOIDS 1 OS=Solanum lycopersicum OX=4081 GN=EOT1 PE=2 ...	[more]

BLAST of Chy10G185610 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CCT8	1.8e-176	98.43	Protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0KWX6	1.9e-165	94.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623840 PE=3 SV=1	[more]
A0A1S3BFS5	5.5e-165	94.04	protein LATERAL ROOT PRIMORDIUM 1 OS=Cucumis melo OX=3656 GN=LOC103489517 PE=3 S...	[more]
A0A6J1GXY1	2.8e-137	81.50	protein LATERAL ROOT PRIMORDIUM 1-like OS=Cucurbita moschata OX=3662 GN=LOC11145...	[more]
A0A6J1CEG6	1.6e-135	81.85	protein LATERAL ROOT PRIMORDIUM 1 OS=Momordica charantia OX=3673 GN=LOC111009988...	[more]

BLAST of Chy10G185610 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0034761.1	1.73e-225	98.43	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo var. makuwa] >TYK09315.1 protein...	[more]
XP_004142483.1	1.43e-211	94.36	protein LATERAL ROOT PRIMORDIUM 1 [Cucumis sativus] >KGN52321.1 hypothetical pro...	[more]
XP_008446964.1	5.82e-211	94.04	PREDICTED: protein LATERAL ROOT PRIMORDIUM 1 [Cucumis melo]	[more]
XP_038892899.1	3.79e-193	88.09	protein LATERAL ROOT PRIMORDIUM 1 [Benincasa hispida]	[more]
XP_022956997.1	1.12e-174	81.50	protein LATERAL ROOT PRIMORDIUM 1-like [Cucurbita moschata]	[more]

BLAST of Chy10G185610 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12330.2	3.0e-54	43.52	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.1	3.0e-54	43.52	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.4	3.0e-54	43.52	Lateral root primordium (LRP) protein-related	[more]
AT4G36260.1	1.2e-31	44.75	Lateral root primordium (LRP) protein-related	[more]
AT5G12330.3	1.8e-30	40.85	Lateral root primordium (LRP) protein-related	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF05142	DUF702	coord: 118..298 e-value: 1.2E-57 score: 194.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 203..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 83..115
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..233
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..74
None	No IPR available	PANTHER	PTHR31604:SF28	PROTEIN SHI RELATED SEQUENCE 6	coord: 1..312
IPR006511	SHORT INTERNODES, C-terminal	TIGRFAM	TIGR01624	TIGR01624	coord: 250..296 e-value: 3.7E-26 score: 88.8
IPR006510	Zinc finger, lateral root primordium type 1	TIGRFAM	TIGR01623	TIGR01623	coord: 119..161 e-value: 1.5E-24 score: 83.7
IPR007818	SHI protein family	PANTHER	PTHR31604	PROTEIN LATERAL ROOT PRIMORDIUM 1	coord: 1..312

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G185610.1	Chy10G185610.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009734	auxin-activated signaling pathway
biological_process	GO:0009851	auxin biosynthetic process
biological_process	GO:0045893	positive regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding