Chy10G185250 (gene) Cucumber (hystrix) v1

Overview
NameChy10G185250
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH10: 17630140 .. 17630695 (-)
RNA-Seq ExpressionChy10G185250
SyntenyChy10G185250
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGGGGCAACACGCGGCCTCCATCGAGGAATTCCCGTATCAAATTCAGTTGGTGTTCATCAAAGAGCACCTACGTCCCGCCCTTTTGCATACCTCCATAAATACCGCCATTTTTATACTACTCCCCTCTCCTCTGCCGCTCTCCCCCTTCCAGGTTTGACTCTCTACTTCTTCCCTATTTGAATCTGGTTTATGCCCAATCTTTTTTTTTCTTTTGCATCTCTCTTTCTGCTTATTTTGATACTTGTTTTACTTCTCAATATGATTGTTTGAATTTGGTCACTGTGATTAATCAGATTTGGTTGAATATTCTATAACTGAAATGTTGTTAATAACTGCATTGGTTTTGAGCTGCCGATTCGAAATGAACCACTAGAATTGGATTTTCTATACAGATCTTCTCTGAATAGTTTTGAGATCGAGTGTTTACTTCAGTAGTTTAGCTGTTGTTACAATTCAAATGGAAGCTGATTGATTTTTTGTTTTTTTTTGTTTTTTGTTTTTAATGCAGAGTTGGATGGGAGGTGGAAACTATATATGGGTGTAATTATATCTAA

mRNA sequence

AGGGGGCAACACGCGGCCTCCATCGAGGAATTCCCGTATCAAATTCAGTTGGTGTTCATCAAAGAGCACCTACGTCCCGCCCTTTTGCATACCTCCATAAATACCGCCATTTTTATACTACTCCCCTCTCCTCTGCCGCTCTCCCCCTTCCAGAGTTGGATGGGAGGTGGAAACTATATATGGGTGTAATTATATCTAA

Coding sequence (CDS)

AGGGGGCAACACGCGGCCTCCATCGAGGAATTCCCGTATCAAATTCAGTTGGTGTTCATCAAAGAGCACCTACGTCCCGCCCTTTTGCATACCTCCATAAATACCGCCATTTTTATACTACTCCCCTCTCCTCTGCCGCTCTCCCCCTTCCAGAGTTGGATGGGAGGTGGAAACTATATATGGGTGTAATTATATCTAA

Protein sequence

RGQHAASIEEFPYQIQLVFIKEHLRPALLHTSINTAIFILLPSPLPLSPFQSWMGGGNYIWV*LYLX
Homology
[Close]
BLAST of Chy10G185250 vs. ExPASy TrEMBL
Match: A0A0A0KRK3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623440 PE=4 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 6.2e-18
Identity = 52/64 (81.25%), Postives = 55/64 (85.94%), Query Frame = 0 

Query: 2  GQHAASIEEFPYQIQLVFIKEHLRPALLHTSINTAIFILLPSPLPLSPFQ-SW----MGG 61
          GQHAASIEEFPYQIQLVFIKEHLRPALLHTSINTAIF+LLPSPLPLSP +  W    + G
Sbjct: 2  GQHAASIEEFPYQIQLVFIKEHLRPALLHTSINTAIFMLLPSPLPLSPSRVGWEVETIYG 61

[Close]
BLAST of Chy10G185250 vs. NCBI nr
Match: KGN52280.1 (hypothetical protein Csa_008577 [Cucumis sativus])

HSP 1 Score: 99.4 bits (246), Expect = 1.24e-25
Identity = 52/64 (81.25%), Postives = 55/64 (85.94%), Query Frame = 0 

Query: 2  GQHAASIEEFPYQIQLVFIKEHLRPALLHTSINTAIFILLPSPLPLSPFQ-SW----MGG 60
          GQHAASIEEFPYQIQLVFIKEHLRPALLHTSINTAIF+LLPSPLPLSP +  W    + G
Sbjct: 2  GQHAASIEEFPYQIQLVFIKEHLRPALLHTSINTAIFMLLPSPLPLSPSRVGWEVETIYG 61

[Close]
BLAST of Chy10G185250 vs. NCBI nr
Match: XP_031741996.1 (aminodeoxychorismate synthase, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 97.8 bits (242), Expect = 9.96e-22
Identity = 47/48 (97.92%), Postives = 48/48 (100.00%), Query Frame = 0 

Query: 2  GQHAASIEEFPYQIQLVFIKEHLRPALLHTSINTAIFILLPSPLPLSP 49
          GQHAASIEEFPYQIQLVFIKEHLRPALLHTSINTAIF+LLPSPLPLSP
Sbjct: 2  GQHAASIEEFPYQIQLVFIKEHLRPALLHTSINTAIFMLLPSPLPLSP 49

The following BLAST results are available for this feature:
BLAST of Chy10G185250 vs.
Match NameE-valueIdentityDescription
BLAST of Chy10G185250 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KRK36.2e-1881.25Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G623440 PE=4 SV=1[more]
BLAST of Chy10G185250 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN52280.11.24e-2581.25hypothetical protein Csa_008577 [Cucumis sativus][more]
XP_031741996.19.96e-2297.92aminodeoxychorismate synthase, chloroplastic isoform X2 [Cucumis sativus][more]
BLAST of Chy10G185250 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy10G185250.1Chy10G185250.1mRNA