Chy10G184300 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAGAAGAAGAGGTATAAGATTGATTTTCTTACTGTTTTGTTCTACCTTGGCCATTTCATCTGCTGCTCTCCAACAACAAATCTTCCCAACGGCAACAGGTCAGTATCCTTTCCAATCTCTTGAGGAAATTCAATTCACTTTGTTTTATTTTCTATTGTTTTATCACAAATCTTCTCTGCATATTCATTTTTTTGGACCACACAATTTAAAAATTGAATCAGACTGATCATGAAATCATTTCTTGGTATCTAGTTCTTAATGAAAATCTAGTCTCCACGAAAAAAGTAATAATTCCTTCCAAGAAAATCAGTGCATCATACTAATCCAACATAAATGTTAGATGTGAGTTCATTAATTTGAACATGATATAAATTTGAGGTACTTCTCTGTATTCAATAGTAAAAGAGTGTCAGTGCAGTTTCATTAAACGATGAGTTTCGTCAAACAATTTTTTCTTAAAAAGCTCAAAAGTTCTATCCTTTATGTTAAAGGGGTGTTTGGAGCTTTAAATTTAATTATGAAGTTTAAAGTTCTATCCTTTATGTTTAGGGTATATAGTTGAAAGATAGATTTTCTTGTTAAATGCTTAAAATAGATTATAATAGATTACACGTCTAGAGTTAATACAGTAGAGTTAAAAACTACAACTTAGAGTACATAGTTGAAAGGTAGAGTCTCTTGTTAAATGCAGAAAATAGAGAAATAAGAACAGATAACGGTTCTAGATAAATGGACCATTTCATATAATTTACCATAGAAGTTTAATAGTTTAGTATCAATTTATAAAAAAAAAAGTTTGTAGGTTAAATACCTTGGATGCTTTTAAGTTCTTTGTTCTCTTCTCTTAAAAGCCGTGAAAGTAAACTACAAAATCGTCCATGTCAAAAGCTTAAACTTGCGGATTACTACAAAAAAAAATTGAATCATCATAATACTAAAATTCTCCATGACTAATAATTTTGATATCATGATAAGTGACCCATTAGCTCAAAAGTTTAGGTAGGTAAATCCATTAAGCCAACCAAGCAACAAAGAGAATCGGTAAAAAAGTATATACGACAAAGTTGAATTATGAAACCGACAAGAAGCTAAAATAAAGAGTGCATTCCAGATAACGTGTGGATGTATAACGACAAAATTTGCATGATTGAAAATCAGAATAAAATAGTAATGTGAAAAAGAAAAGAATAAAAGATTAATAGAAGAGTAAAGGGTAGTGAGGATTGCAGGTTAACATGTCCTTTGGGATTTCGAATGAAAATAAATATGTAAATAGAATAAAGTTCAATGTCCAGTGAATGGAGGGGCCATAGTCCCATAACAATGTAAGGGTTTTCCAATAACTTTAGCTTTTGGGAGATAATATTTTAAATCAAATCCGAGTCTAGATGCTGCTCATCAGTACTGACAGAAGTGATCAAATAATCAACTATTCTCATTAGTCAAGATAATATTCATAATCTCAAATTTAGTTCTCTTTTATTTGAATGGTAATACTTAATAAAAACAAAGTGATCAAATGATTGAGTTTTCATTTATTTTATGATGCATGATGCTTACAAGTTACATATATGTTTGGTTGCAAAAAGATGTGTTTTTTTGGAACTTGTTCAATAAGCTTGTCCTATTCCTATTCCCATTCCTATTCCCGTTTTTCAATAAGCTCTACTTATTCTTACTCTTTATTCGCTGTATTTAATTTGTGAATATATACATTAGTATTAAAAATGTAATTTGAAACTACTTGGTTAGAGAGGTAATGGAAAAGGAGTTTCCAAAACAGAAAAATATAGGGTCTACTTGTTTAAAAACCTTGAACAAAGTTCAATAGGATGAATTTTACGTCATAAAACAGCTTATTTTCGTGAAATATCAGAAAATTGAACTTTAACTTTTTAAAAGAATAATGATAATGATTTTAGGCATGAAAACCAATTCTACAGCAACATTCTAAAAAAATTGAAAATATGGCCAAGTTTGAGTCAGTCTATCCGTGCTACCAATATTTGCAATATGGTTTTTCAATGATAGACTTTGTTATTTATGCTAATACTTAACAGTTATATTTGCAAATATTTTCTTCTAAAAACACGTTACTTAAGTATGAAGTTTCAAATATAATGGAGTTGAAATATAAGAACCCAAACTTTCAAAAATATTATGAAGTGGAAATGTACGTGCGCATGCGAATATACAGAAAAAATTTGTGATCTTCTTAACCACCGTTTGTAAAAAATATAATTTAACAAAAAAAATTACACATATATATGATTCCTACTGGCCGTGTGTATTTATAGTGTGTGTTTCTTTAAATATGTTCTATTCTATATGTATGCAGAGTCTAATTACCAACAGAAAACTTACACAAAAAAGCATGGTAAATATGGGGTTACTAACCAGATTAACAAAAGATACAGTGCAAGTGCAATCACCGTTTCTAATGTGATTCGTCGTGGAAGTGCAGCCGCTGCTGGCGGTGGGGAAAATGGTGGTGGCAGTAGACCTCATACAGGAGGAGGTACAGCCGTGATCCCAGTTTATGCAGCTGGTTCAGCACAAGCACATCACCGCCAAGGTCGACCACATAATGCAGGAAAGAGCTATGAGAACAATATGGGGTTTCTGGTAGCTGCAGTTTTGGCCGCCATTGCTCATCTCTGTAGAGTTTTCTGA ATGGGAAGAAGAAGAGGTATAAGATTGATTTTCTTACTGTTTTGTTCTACCTTGGCCATTTCATCTGCTGCTCTCCAACAACAAATCTTCCCAACGGCAACAGAGTCTAATTACCAACAGAAAACTTACACAAAAAAGCATGGTAAATATGGGGTTACTAACCAGATTAACAAAAGATACAGTGCAAGTGCAATCACCGTTTCTAATGTGATTCGTCGTGGAAGTGCAGCCGCTGCTGGCGGTGGGGAAAATGGTGGTGGCAGTAGACCTCATACAGGAGGAGGTACAGCCGTGATCCCAGTTTATGCAGCTGGTTCAGCACAAGCACATCACCGCCAAGGTCGACCACATAATGCAGGAAAGAGCTATGAGAACAATATGGGGTTTCTGGTAGCTGCAGTTTTGGCCGCCATTGCTCATCTCTGTAGAGTTTTCTGA ATGGGAAGAAGAAGAGGTATAAGATTGATTTTCTTACTGTTTTGTTCTACCTTGGCCATTTCATCTGCTGCTCTCCAACAACAAATCTTCCCAACGGCAACAGAGTCTAATTACCAACAGAAAACTTACACAAAAAAGCATGGTAAATATGGGGTTACTAACCAGATTAACAAAAGATACAGTGCAAGTGCAATCACCGTTTCTAATGTGATTCGTCGTGGAAGTGCAGCCGCTGCTGGCGGTGGGGAAAATGGTGGTGGCAGTAGACCTCATACAGGAGGAGGTACAGCCGTGATCCCAGTTTATGCAGCTGGTTCAGCACAAGCACATCACCGCCAAGGTCGACCACATAATGCAGGAAAGAGCTATGAGAACAATATGGGGTTTCTGGTAGCTGCAGTTTTGGCCGCCATTGCTCATCTCTGTAGAGTTTTCTGA MGRRRGIRLIFLLFCSTLAISSAALQQQIFPTATESNYQQKTYTKKHGKYGVTNQINKRYSASAITVSNVIRRGSAAAAGGGENGGGSRPHTGGGTAVIPVYAAGSAQAHHRQGRPHNAGKSYENNMGFLVAAVLAAIAHLCRVF* Homology
BLAST of Chy10G184300 vs. ExPASy TrEMBL
Match: A0A0A0KUR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G613600 PE=4 SV=1) HSP 1 Score: 250.8 bits (639), Expect = 3.6e-63 Identity = 138/155 (89.03%), Postives = 140/155 (90.32%), Query Frame = 0
BLAST of Chy10G184300 vs. ExPASy TrEMBL
Match: A0A5A7SUI0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001940 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61 Identity = 131/144 (90.97%), Postives = 135/144 (93.75%), Query Frame = 0
BLAST of Chy10G184300 vs. ExPASy TrEMBL
Match: A0A1S3BFU8 (uncharacterized protein LOC103489382 OS=Cucumis melo OX=3656 GN=LOC103489382 PE=4 SV=1) HSP 1 Score: 245.4 bits (625), Expect = 1.5e-61 Identity = 131/144 (90.97%), Postives = 135/144 (93.75%), Query Frame = 0
BLAST of Chy10G184300 vs. ExPASy TrEMBL
Match: A0A6J1GZ71 (glycine-rich RNA-binding protein GRP1A-like OS=Cucurbita moschata OX=3662 GN=LOC111458855 PE=4 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 1.5e-40 Identity = 104/146 (71.23%), Postives = 112/146 (76.71%), Query Frame = 0
BLAST of Chy10G184300 vs. ExPASy TrEMBL
Match: A0A6J1JB47 (uncharacterized protein LOC111485159 OS=Cucurbita maxima OX=3661 GN=LOC111485159 PE=4 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 3.3e-40 Identity = 103/146 (70.55%), Postives = 112/146 (76.71%), Query Frame = 0
BLAST of Chy10G184300 vs. NCBI nr
Match: XP_011655831.2 (glycine-rich protein DOT1 [Cucumis sativus] >KAE8648819.1 hypothetical protein Csa_009069 [Cucumis sativus]) HSP 1 Score: 250 bits (639), Expect = 6.73e-83 Identity = 138/159 (86.79%), Postives = 140/159 (88.05%), Query Frame = 0
BLAST of Chy10G184300 vs. NCBI nr
Match: XP_008446752.1 (PREDICTED: uncharacterized protein LOC103489382 [Cucumis melo] >KAA0034650.1 uncharacterized protein E6C27_scaffold65G006690 [Cucumis melo var. makuwa] >TYK09201.1 uncharacterized protein E5676_scaffold475G001940 [Cucumis melo var. makuwa]) HSP 1 Score: 246 bits (628), Expect = 2.13e-81 Identity = 131/144 (90.97%), Postives = 135/144 (93.75%), Query Frame = 0
BLAST of Chy10G184300 vs. NCBI nr
Match: XP_038892711.1 (uncharacterized protein LOC120081693 [Benincasa hispida]) HSP 1 Score: 209 bits (533), Expect = 5.59e-67 Identity = 116/145 (80.00%), Postives = 124/145 (85.52%), Query Frame = 0
BLAST of Chy10G184300 vs. NCBI nr
Match: XP_023517064.1 (glycine-rich RNA-binding protein GRP1A-like [Cucurbita pepo subsp. pepo] >KAG7032020.1 hypothetical protein SDJN02_06062 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 179 bits (453), Expect = 8.46e-55 Identity = 105/146 (71.92%), Postives = 113/146 (77.40%), Query Frame = 0
BLAST of Chy10G184300 vs. NCBI nr
Match: XP_022957462.1 (glycine-rich RNA-binding protein GRP1A-like [Cucurbita moschata]) HSP 1 Score: 177 bits (449), Expect = 3.44e-54 Identity = 104/146 (71.23%), Postives = 112/146 (76.71%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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