Chy10G181990 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G181990
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Pentatricopeptide repeat-containing protein
Location	chrH10: 15465211 .. 15467025 (+)
RNA-Seq Expression	Chy10G181990
Synteny	Chy10G181990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATCTCCTGTATTCCAACTTGCCAATTCACTCTCACAAAACCAAGCTCCGCCTTTTCCAAGAATGAGTTCGTAATAAATCAACTCAACCCTCTTTCTCTTTTGTCCAAATGTACATCTCTCAACCAGCTCAAGCAAATTCAAGCATATACCATTAAAACCAATCTTCAGAGTGATATCTCTGTTCTCACCAAGCTCATTAATTTCTGCACACTCAACCCGACAACTTCGTATATGGACCATGCCCACCATCTGTTTGATCAAATTCTTGACAAGGATATTGTTCTGTTTAACATAATGGCACGGGGTTATGCTCGCTCTAATTCTCCCTATCTTGCCTTTTCTCTTTTTGGTGAACTCTTGTGCTCTGGTCTTCTTCCTGATGACTACACATTCTCGTCCCTTCTCAAGGCGTGTGCGAGTTCTAAGGCCTTGAGAGAAGGTATGGGGTTGCATTGTTTTGCTGTTAAACTTGGACTGAATCATAATATTTACATATGCTCAACTCTCATAAATATGTATGCGGAGTGCAATGACATGAATGCTGCGCGTGGAGTGTTTGATGAAATGGAACAGCCATGTATAGTTAGCTATAATGCAATTATCACGGGTTATGCTCGAAGTAGTCAGCCCAATGAGGCTTTGTCGTTGTTTAGAGAATTGCAAGCGAGCAATATTGAGCCAACTGATGTAACTATGCTTAGTGTAATTATGTCATGTGCTCTGTTGGGAGCACTAGACCTGGGAAAGTGGATTCATGAATATGTTAAGAAGAAAGGGTTTGATAAATATGTGAAGGTGAACACTGCACTTATAGATCTGTTTGCGAAATGTGGAAGTCTAACTGATGCTATTTCTATCTTTGAGGGCATGCGTGTGAGAGATACACAAGCTTGGTCTGCAATGATAGTTGCCTTTGCAACTCATGGGGATGGCTTGAAAGCAATCTCAATGTTTGAAGAGATGAAGAGGGAAGGAGTTAGACCTGATGAGATCACTTTTTTGGGGCTTTTGTATGCTTGTAGTCATGCTGGGCTAGTAGAACAAGGTCGAGGGTATTTCTATAGTATGTCTAAAACCTATGGGATAACTCCAGGGATCAAGCATTACGGTTGTATGGTGGATTTGCTTGGTCGAGCAGGTCATTTAGATGAGGCTTATAACTTTGTAGATAAACTGGAAATTAAGCCCACGCCTATACTCTGGCGGACCCTTTTATCTGCTTGCAGCACCCATGGTAATGTCGAAATGGCAAAGCGGGTTATTGAAAGAATTTTTGAATTAGATGACGCCCATGGAGGGGACTATGTTATATTATCAAACTTGTATGCTAGAGTAGGAAGATGGGAAGATGTGAATCATTGGAGGAAACTGATGAAAGATAGAGGGGTGGTGAAGGTTCCTGGGTGTAGTTCCGTGGAGGTAAACAATGTTGTACATGAGTTCTTCTCTGGAGATGGAGTTCACTGCGTTTCGGTGGAGTTGCGACGAGCACTTGACGAGTTAATGAAAGAAATAAAGTTGGTGGGATATGTTCCGGATACATCTTTAGTATATCATGCTGATATGGAAGAGGAAGGGAAAGAACTTGTCCTAAGATATCACAGTGAAAAATTGGCCATGGCTTTTGGGCTCCTAAATACACCTCCCGGTACAACAATAAGGGTAGCTAAGAACCTCCGTATTTGTGGAGATTGTCATAATGCTGCAAAACTTATATCTTTTATTTTTGGGAGGAAAATCGTCATTAGGGACGTTCAACGATTCCATCGATTTGAAGATGGGAAATGCTCCTGTGGTGATTTCTGGTAA

mRNA sequence

ATGGCAATCTCCTGTATTCCAACTTGCCAATTCACTCTCACAAAACCAAGCTCCGCCTTTTCCAAGAATGAGTTCGTAATAAATCAACTCAACCCTCTTTCTCTTTTGTCCAAATGTACATCTCTCAACCAGCTCAAGCAAATTCAAGCATATACCATTAAAACCAATCTTCAGAGTGATATCTCTGTTCTCACCAAGCTCATTAATTTCTGCACACTCAACCCGACAACTTCGTATATGGACCATGCCCACCATCTGTTTGATCAAATTCTTGACAAGGATATTGTTCTGTTTAACATAATGGCACGGGGTTATGCTCGCTCTAATTCTCCCTATCTTGCCTTTTCTCTTTTTGGTGAACTCTTGTGCTCTGGTCTTCTTCCTGATGACTACACATTCTCGTCCCTTCTCAAGGCGTGTGCGAGTTCTAAGGCCTTGAGAGAAGGTATGGGGTTGCATTGTTTTGCTGTTAAACTTGGACTGAATCATAATATTTACATATGCTCAACTCTCATAAATATGTATGCGGAGTGCAATGACATGAATGCTGCGCGTGGAGTGTTTGATGAAATGGAACAGCCATGTATAGTTAGCTATAATGCAATTATCACGGGTTATGCTCGAAGTAGTCAGCCCAATGAGGCTTTGTCGTTGTTTAGAGAATTGCAAGCGAGCAATATTGAGCCAACTGATGTAACTATGCTTAGTGTAATTATGTCATGTGCTCTGTTGGGAGCACTAGACCTGGGAAAGTGGATTCATGAATATGTTAAGAAGAAAGGGTTTGATAAATATGTGAAGGTGAACACTGCACTTATAGATCTGTTTGCGAAATGTGGAAGTCTAACTGATGCTATTTCTATCTTTGAGGGCATGCGTGTGAGAGATACACAAGCTTGGTCTGCAATGATAGTTGCCTTTGCAACTCATGGGGATGGCTTGAAAGCAATCTCAATGTTTGAAGAGATGAAGAGGGAAGGAGTTAGACCTGATGAGATCACTTTTTTGGGGCTTTTGTATGCTTGTAGTCATGCTGGGCTAGTAGAACAAGGTCGAGGGTATTTCTATAGTATGTCTAAAACCTATGGGATAACTCCAGGGATCAAGCATTACGGTTGTATGGTGGATTTGCTTGGTCGAGCAGGTCATTTAGATGAGGCTTATAACTTTGTAGATAAACTGGAAATTAAGCCCACGCCTATACTCTGGCGGACCCTTTTATCTGCTTGCAGCACCCATGGTAATGTCGAAATGGCAAAGCGGGTTATTGAAAGAATTTTTGAATTAGATGACGCCCATGGAGGGGACTATGTTATATTATCAAACTTGTATGCTAGAGTAGGAAGATGGGAAGATGTGAATCATTGGAGGAAACTGATGAAAGATAGAGGGGTGGTGAAGGTTCCTGGGTGTAGTTCCGTGGAGGTAAACAATGTTGTACATGAGTTCTTCTCTGGAGATGGAGTTCACTGCGTTTCGGTGGAGTTGCGACGAGCACTTGACGAGTTAATGAAAGAAATAAAGTTGGTGGGATATGTTCCGGATACATCTTTAGTATATCATGCTGATATGGAAGAGGAAGGGAAAGAACTTGTCCTAAGATATCACAGTGAAAAATTGGCCATGGCTTTTGGGCTCCTAAATACACCTCCCGGTACAACAATAAGGGTAGCTAAGAACCTCCGTATTTGTGGAGATTGTCATAATGCTGCAAAACTTATATCTTTTATTTTTGGGAGGAAAATCGTCATTAGGGACGTTCAACGATTCCATCGATTTGAAGATGGGAAATGCTCCTGTGGTGATTTCTGGTAA

Coding sequence (CDS)

ATGGCAATCTCCTGTATTCCAACTTGCCAATTCACTCTCACAAAACCAAGCTCCGCCTTTTCCAAGAATGAGTTCGTAATAAATCAACTCAACCCTCTTTCTCTTTTGTCCAAATGTACATCTCTCAACCAGCTCAAGCAAATTCAAGCATATACCATTAAAACCAATCTTCAGAGTGATATCTCTGTTCTCACCAAGCTCATTAATTTCTGCACACTCAACCCGACAACTTCGTATATGGACCATGCCCACCATCTGTTTGATCAAATTCTTGACAAGGATATTGTTCTGTTTAACATAATGGCACGGGGTTATGCTCGCTCTAATTCTCCCTATCTTGCCTTTTCTCTTTTTGGTGAACTCTTGTGCTCTGGTCTTCTTCCTGATGACTACACATTCTCGTCCCTTCTCAAGGCGTGTGCGAGTTCTAAGGCCTTGAGAGAAGGTATGGGGTTGCATTGTTTTGCTGTTAAACTTGGACTGAATCATAATATTTACATATGCTCAACTCTCATAAATATGTATGCGGAGTGCAATGACATGAATGCTGCGCGTGGAGTGTTTGATGAAATGGAACAGCCATGTATAGTTAGCTATAATGCAATTATCACGGGTTATGCTCGAAGTAGTCAGCCCAATGAGGCTTTGTCGTTGTTTAGAGAATTGCAAGCGAGCAATATTGAGCCAACTGATGTAACTATGCTTAGTGTAATTATGTCATGTGCTCTGTTGGGAGCACTAGACCTGGGAAAGTGGATTCATGAATATGTTAAGAAGAAAGGGTTTGATAAATATGTGAAGGTGAACACTGCACTTATAGATCTGTTTGCGAAATGTGGAAGTCTAACTGATGCTATTTCTATCTTTGAGGGCATGCGTGTGAGAGATACACAAGCTTGGTCTGCAATGATAGTTGCCTTTGCAACTCATGGGGATGGCTTGAAAGCAATCTCAATGTTTGAAGAGATGAAGAGGGAAGGAGTTAGACCTGATGAGATCACTTTTTTGGGGCTTTTGTATGCTTGTAGTCATGCTGGGCTAGTAGAACAAGGTCGAGGGTATTTCTATAGTATGTCTAAAACCTATGGGATAACTCCAGGGATCAAGCATTACGGTTGTATGGTGGATTTGCTTGGTCGAGCAGGTCATTTAGATGAGGCTTATAACTTTGTAGATAAACTGGAAATTAAGCCCACGCCTATACTCTGGCGGACCCTTTTATCTGCTTGCAGCACCCATGGTAATGTCGAAATGGCAAAGCGGGTTATTGAAAGAATTTTTGAATTAGATGACGCCCATGGAGGGGACTATGTTATATTATCAAACTTGTATGCTAGAGTAGGAAGATGGGAAGATGTGAATCATTGGAGGAAACTGATGAAAGATAGAGGGGTGGTGAAGGTTCCTGGGTGTAGTTCCGTGGAGGTAAACAATGTTGTACATGAGTTCTTCTCTGGAGATGGAGTTCACTGCGTTTCGGTGGAGTTGCGACGAGCACTTGACGAGTTAATGAAAGAAATAAAGTTGGTGGGATATGTTCCGGATACATCTTTAGTATATCATGCTGATATGGAAGAGGAAGGGAAAGAACTTGTCCTAAGATATCACAGTGAAAAATTGGCCATGGCTTTTGGGCTCCTAAATACACCTCCCGGTACAACAATAAGGGTAGCTAAGAACCTCCGTATTTGTGGAGATTGTCATAATGCTGCAAAACTTATATCTTTTATTTTTGGGAGGAAAATCGTCATTAGGGACGTTCAACGATTCCATCGATTTGAAGATGGGAAATGCTCCTGTGGTGATTTCTGGTAA

Protein sequence

MAISCIPTCQFTLTKPSSAFSKNEFVINQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW*

Homology

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BLAST of Chy10G181990 vs. ExPASy Swiss-Prot
Match: Q8LK93 (Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H26 PE=2 SV=2)

HSP 1 Score: 834.3 bits (2154), Expect = 8.6e-241
Identity = 391/590 (66.27%), Postives = 481/590 (81.53%), Query Frame = 0


Query: 17  SSAFSKNEFV--INQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSDISVLTKLINFCTLN 76
           +  F+K+  +  +N  NP+ L+SKC SL +L QIQAY IK++++ D+S + KLINFCT +
Sbjct: 15  AETFTKHSKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTES 74

Query: 77  PTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFS 136
           PT S M +A HLF+ + + DIV+FN MARGY+R  +P   FSLF E+L  G+LPD+YTF 
Sbjct: 75  PTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFP 134

Query: 137 SLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECNDMNAARGVFDEMEQP 196
           SLLKACA +KAL EG  LHC ++KLGL+ N+Y+C TLINMY EC D+++AR VFD + +P
Sbjct: 135 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEP 194

Query: 197 CIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIH 256
           C+V YNA+ITGYAR ++PNEALSLFRE+Q   ++P ++T+LSV+ SCALLG+LDLGKWIH
Sbjct: 195 CVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIH 254

Query: 257 EYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGL 316
           +Y KK  F KYVKVNTALID+FAKCGSL DA+SIFE MR +DTQAWSAMIVA+A HG   
Sbjct: 255 KYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAE 314

Query: 317 KAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCM 376
           K++ MFE M+ E V+PDEITFLGLL ACSH G VE+GR YF  M   +GI P IKHYG M
Sbjct: 315 KSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSM 374

Query: 377 VDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHG 436
           VDLL RAG+L++AY F+DKL I PTP+LWR LL+ACS+H N+++A++V ERIFELDD+HG
Sbjct: 375 VDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHG 434

Query: 437 GDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSV 496
           GDYVILSNLYAR  +WE V+  RK+MKDR  VKVPGCSS+EVNNVVHEFFSGDGV   + 
Sbjct: 435 GDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATT 494

Query: 497 ELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTT 556
           +L RALDE++KE+KL GYVPDTS+V HA+M ++ KE+ LRYHSEKLA+ FGLLNTPPGTT
Sbjct: 495 KLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTT 554

Query: 557 IRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 605
           IRV KNLR+C DCHNAAKLIS IFGRK+V+RDVQRFH FEDGKCSCGDFW
Sbjct: 555 IRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603

[Close]

BLAST of Chy10G181990 vs. ExPASy Swiss-Prot
Match: Q9FJY7 (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 7.7e-141
Identity = 237/608 (38.98%), Postives = 368/608 (60.53%), Query Frame = 0


Query: 28  NQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLF 87
           N    +S L +C+   +LKQI A  +KT L  D   +TK ++FC  + ++ ++ +A  +F
Sbjct: 13  NLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72

Query: 88  DQILDKDIVLFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALR 147
           D     D  L+N+M RG++ S+ P  +  L+  +LCS    + YTF SLLKAC++  A  
Sbjct: 73  DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132

Query: 148 EGMGLHCFAVKLGLNHNIYICSTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYA 207
           E   +H    KLG  +++Y  ++LIN YA   +   A  +FD + +P  VS+N++I GY 
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192

Query: 208 RSSQPN-------------------------------EALSLFRELQASNIEPTDVTMLS 267
           ++ + +                               EAL LF E+Q S++EP +V++ +
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252

Query: 268 VIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRD 327
            + +CA LGAL+ GKWIH Y+ K        +   LID++AKCG + +A+ +F+ ++ + 
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312

Query: 328 TQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFY 387
            QAW+A+I  +A HG G +AIS F EM++ G++P+ ITF  +L ACS+ GLVE+G+  FY
Sbjct: 313 VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 372

Query: 388 SMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNV 447
           SM + Y + P I+HYGC+VDLLGRAG LDEA  F+ ++ +KP  ++W  LL AC  H N+
Sbjct: 373 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI 432

Query: 448 EMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEV 507
           E+ + + E +  +D  HGG YV  +N++A   +W+     R+LMK++GV KVPGCS++ +
Sbjct: 433 ELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISL 492

Query: 508 NNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYH 567
               HEF +GD  H    +++     + ++++  GYVP+   +    ++++ +E ++  H
Sbjct: 493 EGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQH 552

Query: 568 SEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDG 605
           SEKLA+ +GL+ T PGT IR+ KNLR+C DCH   KLIS I+ R IV+RD  RFH F DG
Sbjct: 553 SEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDG 612

[Close]

BLAST of Chy10G181990 vs. ExPASy Swiss-Prot
Match: Q9LN01 (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)

HSP 1 Score: 493.4 bits (1269), Expect = 3.6e-138
Identity = 238/602 (39.53%), Postives = 368/602 (61.13%), Query Frame = 0


Query: 33  LSLLSKCTSLNQLKQIQAYTIKTNLQSDISVLTKLINFCTLN------------------ 92
           L   +K  +  + +QI  + +K     D+ V T LI+    N                  
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200

Query: 93  ----------PTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGELLCS 152
                      +  Y+++A  LFD+I  KD+V +N M  GYA + +   A  LF +++ +
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260

Query: 153 GLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECNDMNAA 212
            + PD+ T  +++ ACA S ++  G  +H +    G   N+ I + LI++Y++C ++  A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320

Query: 213 RGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALL 272
            G+F+ +    ++S+N +I GY   +   EAL LF+E+  S   P DVTMLS++ +CA L
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380

Query: 273 GALDLGKWIHEYVKK--KGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAWSA 332
           GA+D+G+WIH Y+ K  KG      + T+LID++AKCG +  A  +F  +  +   +W+A
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440

Query: 333 MIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTY 392
           MI  FA HG    +  +F  M++ G++PD+ITF+GLL ACSH+G+++ GR  F +M++ Y
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 500

Query: 393 GITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAKRV 452
            +TP ++HYGCM+DLLG +G   EA   ++ +E++P  ++W +LL AC  HGNVE+ +  
Sbjct: 501 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 560

Query: 453 IERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVVHE 512
            E + +++  + G YV+LSN+YA  GRW +V   R L+ D+G+ KVPGCSS+E+++VVHE
Sbjct: 561 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 620

Query: 513 FFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAM 572
           F  GD  H  + E+   L+E+   ++  G+VPDTS V   +MEEE KE  LR+HSEKLA+
Sbjct: 621 FIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ-EMEEEWKEGALRHHSEKLAI 680

Query: 573 AFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGD 605
           AFGL++T PGT + + KNLR+C +CH A KLIS I+ R+I+ RD  RFH F DG CSC D
Sbjct: 681 AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCND 740

[Close]

BLAST of Chy10G181990 vs. ExPASy Swiss-Prot
Match: Q3E6Q1 (Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H40 PE=2 SV=1)

HSP 1 Score: 486.5 bits (1251), Expect = 4.4e-136
Identity = 234/559 (41.86%), Postives = 356/559 (63.69%), Query Frame = 0


Query: 46  KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIVLFNIMARGY 105
           K+I  Y +++   S +++ T L++   +      ++ A  LFD +L++++V +N M   Y
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVD---MYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 315

Query: 106 ARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNI 165
            ++ +P  A  +F ++L  G+ P D +    L ACA    L  G  +H  +V+LGL+ N+
Sbjct: 316 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 375

Query: 166 YICSTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS 225
            + ++LI+MY +C +++ A  +F +++   +VS+NA+I G+A++ +P +AL+ F ++++ 
Sbjct: 376 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 435

Query: 226 NIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDA 285
            ++P   T +SVI + A L      KWIH  V +   DK V V TAL+D++AKCG++  A
Sbjct: 436 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 495

Query: 286 ISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHA 345
             IF+ M  R    W+AMI  + THG G  A+ +FEEM++  ++P+ +TFL ++ ACSH+
Sbjct: 496 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 555

Query: 346 GLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRT 405
           GLVE G   FY M + Y I   + HYG MVDLLGRAG L+EA++F+ ++ +KP   ++  
Sbjct: 556 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 615

Query: 406 LLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGV 465
           +L AC  H NV  A++  ER+FEL+   GG +V+L+N+Y     WE V   R  M  +G+
Sbjct: 616 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 675

Query: 466 VKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADME 525
            K PGCS VE+ N VH FFSG   H  S ++   L++L+  IK  GYVPDT+LV    +E
Sbjct: 676 RKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV--LGVE 735

Query: 526 EEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIR 585
            + KE +L  HSEKLA++FGLLNT  GTTI V KNLR+C DCHNA K IS + GR+IV+R
Sbjct: 736 NDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVR 795

Query: 586 DVQRFHRFEDGKCSCGDFW 605
           D+QRFH F++G CSCGD+W
Sbjct: 796 DMQRFHHFKNGACSCGDYW 809

[Close]

BLAST of Chy10G181990 vs. ExPASy Swiss-Prot
Match: A8MQA3 (Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H28 PE=2 SV=2)

HSP 1 Score: 483.8 bits (1244), Expect = 2.8e-135
Identity = 238/569 (41.83%), Postives = 371/569 (65.20%), Query Frame = 0


Query: 40  TSLNQLKQIQAYTIKTNLQ-SDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDK-DIVL 99
           +S+ +L+QI A++I+  +  SD  +   LI +    P+   M +AH +F +I    ++ +
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 100 FNIMARGYARSNSPYLAFSLFGELLCSGLL-PDDYTFSSLLKACASSKALREGMGLHCFA 159
           +N + RGYA   +   AFSL+ E+  SGL+ PD +T+  L+KA  +   +R G  +H   
Sbjct: 88  WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147

Query: 160 VKLGLNHNIYICSTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEAL 219
           ++ G    IY+ ++L+++YA C D+ +A  VFD+M +  +V++N++I G+A + +P EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207

Query: 220 SLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLF 279
           +L+ E+ +  I+P   T++S++ +CA +GAL LGK +H Y+ K G  + +  +  L+DL+
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267

Query: 280 AKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMK-REGVRPDEITF 339
           A+CG + +A ++F+ M  +++ +W+++IV  A +G G +AI +F+ M+  EG+ P EITF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327

Query: 340 LGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLE 399
           +G+LYACSH G+V++G  YF  M + Y I P I+H+GCMVDLL RAG + +AY ++  + 
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387

Query: 400 IKPTPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNH 459
           ++P  ++WRTLL AC+ HG+ ++A+    +I +L+  H GDYV+LSN+YA   RW DV  
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447

Query: 460 WRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPD 519
            RK M   GV KVPG S VEV N VHEF  GD  H  S  +   L E+   ++  GYVP 
Sbjct: 448 IRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 507

Query: 520 TSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLIS 579
            S VY  D+EEE KE  + YHSEK+A+AF L++TP  + I V KNLR+C DCH A KL+S
Sbjct: 508 ISNVY-VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVS 567

Query: 580 FIFGRKIVIRDVQRFHRFEDGKCSCGDFW 605
            ++ R+IV+RD  RFH F++G CSC D+W
Sbjct: 568 KVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

[Close]

BLAST of Chy10G181990 vs. ExPASy TrEMBL
Match: A0A0A0KU15 (DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605160 PE=3 SV=1)

HSP 1 Score: 1225.3 bits (3169), Expect = 0.0e+00
Identity = 597/604 (98.84%), Postives = 601/604 (99.50%), Query Frame = 0


Query: 1   MAISCIPTCQFTLTKPSSAFSKNEFVINQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSD 60
           MAISCIPTCQFTLTKPSSAFSKNEFVINQL+PLSLLSKCTSLN+LKQIQAYTIKTNLQSD
Sbjct: 1   MAISCIPTCQFTLTKPSSAFSKNEFVINQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSD 60

Query: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGE 120
           ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDI+LFNIMARGYARSNSPYLAFSLFGE
Sbjct: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGE 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECND 180
           LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYIC TLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
           MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240

Query: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAW 300
           CALLGALDLGKWIHEYVKKKGFDKYVKVNTALID+FAKCGSLTDAISIFEGMRVRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK
Sbjct: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360

Query: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAK 420
           TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIK TPILWRTLLSACSTHGNVEMAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAK 420

Query: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVV 480
           RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNH RKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
           HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600
           AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600

Query: 601 GDFW 605
           GDFW
Sbjct: 601 GDFW 604

[Close]

BLAST of Chy10G181990 vs. ExPASy TrEMBL
Match: A0A5A7STH8 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00400 PE=3 SV=1)

HSP 1 Score: 1200.3 bits (3104), Expect = 0.0e+00
Identity = 581/604 (96.19%), Postives = 596/604 (98.68%), Query Frame = 0


Query: 1   MAISCIPTCQFTLTKPSSAFSKNEFVINQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSD 60
           MAISCIPTCQFTLTKPSS FSKNEFVINQL+PLSLLSKCTSL +LKQIQAYTIKTNLQSD
Sbjct: 1   MAISCIPTCQFTLTKPSSTFSKNEFVINQLHPLSLLSKCTSLKELKQIQAYTIKTNLQSD 60

Query: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGE 120
           ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDI+LFNIMARGYARSNSPYLAFSLF +
Sbjct: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFAQ 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECND 180
           LLCSGLLPDDYTFSSLLKACASSKALR+GMGLHCFAVKLGLNHNIYIC TLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
           MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS+IEPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASDIEPTDVTMLSVIMS 240

Query: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAW 300
           CALLGALDLGKWIHEYVKKKGFDKYVKVNTALID+FAKCGSLTDAISIFEGMRVRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVAFATHGDGLK+IS+FEEMKR GVRPDEITFLGLLYACSHAGLVEQGRGYFYSMS+
Sbjct: 301 SAMIVAFATHGDGLKSISIFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSR 360

Query: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAK 420
           TYGITPGIKHYGCMVDLLGR G LDEAYNFVD+LEIKPTPILWRTLLSACSTHGNVEMAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRTGCLDEAYNFVDELEIKPTPILWRTLLSACSTHGNVEMAK 420

Query: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVV 480
           RVIERIFELDD+HGGDYVILSNLYARVGRWEDVNH RKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
           HEFFSGDGVHCVSVELRRALDELMKEIKLVGY+PDTSLVYHADM+EEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYIPDTSLVYHADMDEEGKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600
           AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFH+FEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHQFEDGKCSC 600

Query: 601 GDFW 605
           GDFW
Sbjct: 601 GDFW 604

[Close]

BLAST of Chy10G181990 vs. ExPASy TrEMBL
Match: A0A1S3BFK0 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103489124 PE=3 SV=1)

HSP 1 Score: 1200.3 bits (3104), Expect = 0.0e+00
Identity = 581/604 (96.19%), Postives = 596/604 (98.68%), Query Frame = 0


Query: 1   MAISCIPTCQFTLTKPSSAFSKNEFVINQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSD 60
           MAISCIPTCQFTLTKPSS FSKNEFVINQL+PLSLLSKCTSL +LKQIQAYTIKTNLQSD
Sbjct: 1   MAISCIPTCQFTLTKPSSTFSKNEFVINQLHPLSLLSKCTSLKELKQIQAYTIKTNLQSD 60

Query: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGE 120
           ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDI+LFNIMARGYARSNSPYLAFSLF +
Sbjct: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFAQ 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECND 180
           LLCSGLLPDDYTFSSLLKACASSKALR+GMGLHCFAVKLGLNHNIYIC TLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
           MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS+IEPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASDIEPTDVTMLSVIMS 240

Query: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAW 300
           CALLGALDLGKWIHEYVKKKGFDKYVKVNTALID+FAKCGSLTDAISIFEGMRVRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVAFATHGDGLK+IS+FEEMKR GVRPDEITFLGLLYACSHAGLVEQGRGYFYSMS+
Sbjct: 301 SAMIVAFATHGDGLKSISIFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSR 360

Query: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAK 420
           TYGITPGIKHYGCMVDLLGR G LDEAYNFVD+LEIKPTPILWRTLLSACSTHGNVEMAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRTGCLDEAYNFVDELEIKPTPILWRTLLSACSTHGNVEMAK 420

Query: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVV 480
           RVIERIFELDD+HGGDYVILSNLYARVGRWEDVNH RKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
           HEFFSGDGVHCVSVELRRALDELMKEIKLVGY+PDTSLVYHADM+EEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYIPDTSLVYHADMDEEGKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600
           AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFH+FEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHQFEDGKCSC 600

Query: 601 GDFW 605
           GDFW
Sbjct: 601 GDFW 604

[Close]

BLAST of Chy10G181990 vs. ExPASy TrEMBL
Match: A0A6J1DA68 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019083 PE=3 SV=1)

HSP 1 Score: 1104.0 bits (2854), Expect = 0.0e+00
Identity = 534/604 (88.41%), Postives = 566/604 (93.71%), Query Frame = 0


Query: 1   MAISCIPTCQFTLTKPSSAFSKNEFVINQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSD 60
           M ISCIP+CQFTL KP+SAF  NEF  N  +PL LLSKCTSL +LKQIQA+TIKTNLQ+D
Sbjct: 1   MGISCIPSCQFTLAKPNSAFPNNEFT-NPPHPLFLLSKCTSLRELKQIQAFTIKTNLQND 60

Query: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGE 120
           ISVLTK+INFCTLNP+TS MDHAHHLFDQI DKDIVLFNIMARGYARSN+PYLAFSLF +
Sbjct: 61  ISVLTKIINFCTLNPSTSSMDHAHHLFDQIPDKDIVLFNIMARGYARSNTPYLAFSLFSQ 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECND 180
           +LCSGLLPDDYTFSSLLKACASSKA  EG  LHCFA+KLGLNHNIYIC +LIN+YAECND
Sbjct: 121 VLCSGLLPDDYTFSSLLKACASSKAFSEGRQLHCFAIKLGLNHNIYICPSLINLYAECND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
           MNAARGVFDEME PCIVSYNAIITG+ARSSQPNEALSLFRELQASN+EPTDVTMLS+IMS
Sbjct: 181 MNAARGVFDEMEAPCIVSYNAIITGHARSSQPNEALSLFRELQASNLEPTDVTMLSIIMS 240

Query: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAW 300
           CALLGALDLG+WIHEYVKKKGFDK+VKVNTALID++AKCGSL DAISIFE MRVRDTQAW
Sbjct: 241 CALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSLVDAISIFEDMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVA+ATHGDGLKAISMFEEMKR GVRPDEITFLGLLYACSHAGLVE+GRGYF SMSK
Sbjct: 301 SAMIVAYATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEEGRGYFNSMSK 360

Query: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAK 420
            YGI PGIKHYGCMVDLLGR GHLDEAY F+D  EIKPTPILWRTLLSACS  GNV++AK
Sbjct: 361 YYGIAPGIKHYGCMVDLLGRTGHLDEAYKFIDGSEIKPTPILWRTLLSACSNRGNVDLAK 420

Query: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVV 480
           RVIERIFELDD+HGGDYVILSNL ARVGRWEDVNH RKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLCARVGRWEDVNHIRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
           HEFFSGDGVH +SVELRRALDEL+KEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHSISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600
           A+AFGLLN+PPGT IRV KNLRICGDCH AAKLISFIFGR+IVIRDVQRFHRFEDGKCSC
Sbjct: 541 AIAFGLLNSPPGTPIRVVKNLRICGDCHTAAKLISFIFGRQIVIRDVQRFHRFEDGKCSC 600

Query: 601 GDFW 605
            DFW
Sbjct: 601 CDFW 603

[Close]

BLAST of Chy10G181990 vs. ExPASy TrEMBL
Match: A0A6J1HTT7 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111467412 PE=3 SV=1)

HSP 1 Score: 1090.9 bits (2820), Expect = 0.0e+00
Identity = 528/604 (87.42%), Postives = 560/604 (92.72%), Query Frame = 0


Query: 1   MAISCIPTCQFTLTKPSSAFSKNEFVINQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSD 60
           MAISCIPTCQF LTKP     KNEF INQ +PLSL SKC SL +LKQIQAYTIKTNL +D
Sbjct: 1   MAISCIPTCQFALTKP-----KNEF-INQPHPLSLFSKCASLRELKQIQAYTIKTNLHND 60

Query: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGE 120
           ISVLTKLINFCT  PTTS MDHAHHLFD++LDKDIVLFNIMARGYARSNSPYL FSLF +
Sbjct: 61  ISVLTKLINFCTRYPTTSSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQ 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECND 180
           +LCSGLLPDDYTFSSLLKACA SKAL EG  LHCFA+KLG  HNIYIC TLINMYA CND
Sbjct: 121 VLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGFGHNIYICPTLINMYAACND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
           MNAARGVFD ME+PCIVSYNAIITGYARSSQPNEALSLFRELQASN+EPTDVTMLS+IMS
Sbjct: 181 MNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMS 240

Query: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAW 300
           CALLGALDLG+WIHEYVKKKGFDK+VKVNTALID++AKCGS+ DAISIFEGMRVRDTQAW
Sbjct: 241 CALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVA+ATHGDGLKAISMFEEMK+ GVRPDEITFLGLLYACSHAGLVE+GRGYFYSM K
Sbjct: 301 SAMIVAYATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVEEGRGYFYSMYK 360

Query: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAK 420
            +G+TPGIKHYGCMVDLLGR G LDEAY F+D+L IKPTPILWRTLLSACS HGNV++AK
Sbjct: 361 NHGMTPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAK 420

Query: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVV 480
           RVIERIFELDD+HGGDYVILSNL AR+GRWEDVN  RKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
           HEFFSGDGVH +SVELRRALDEL++EIKL GYVPDTSLVYHADMEEE KELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHSISVELRRALDELIQEIKLAGYVPDTSLVYHADMEEEAKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600
           AMAFGLLNTPPGTTIRV KNLRICGDCHNAAKLIS IFGR+IVIRDVQRFHRFEDG+CSC
Sbjct: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSC 598

Query: 601 GDFW 605
            DFW
Sbjct: 601 CDFW 598

[Close]

BLAST of Chy10G181990 vs. NCBI nr
Match: XP_031742214.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucumis sativus])

HSP 1 Score: 1219 bits (3154), Expect = 0.0
Identity = 597/604 (98.84%), Postives = 601/604 (99.50%), Query Frame = 0


Query: 1   MAISCIPTCQFTLTKPSSAFSKNEFVINQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSD 60
           MAISCIPTCQFTLTKPSSAFSKNEFVINQL+PLSLLSKCTSLN+LKQIQAYTIKTNLQSD
Sbjct: 1   MAISCIPTCQFTLTKPSSAFSKNEFVINQLHPLSLLSKCTSLNELKQIQAYTIKTNLQSD 60

Query: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGE 120
           ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDI+LFNIMARGYARSNSPYLAFSLFGE
Sbjct: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGE 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECND 180
           LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYIC TLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
           MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240

Query: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAW 300
           CALLGALDLGKWIHEYVKKKGFDKYVKVNTALID+FAKCGSLTDAISIFEGMRVRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK
Sbjct: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360

Query: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAK 420
           TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIK TPILWRTLLSACSTHGNVEMAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAK 420

Query: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVV 480
           RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNH RKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
           HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600
           AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600

Query: 601 GDFW 604
           GDFW
Sbjct: 601 GDFW 604

[Close]

BLAST of Chy10G181990 vs. NCBI nr
Match: XP_008446357.1 (PREDICTED: pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucumis melo] >KAA0034422.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK17712.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 1194 bits (3089), Expect = 0.0
Identity = 581/604 (96.19%), Postives = 596/604 (98.68%), Query Frame = 0


Query: 1   MAISCIPTCQFTLTKPSSAFSKNEFVINQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSD 60
           MAISCIPTCQFTLTKPSS FSKNEFVINQL+PLSLLSKCTSL +LKQIQAYTIKTNLQSD
Sbjct: 1   MAISCIPTCQFTLTKPSSTFSKNEFVINQLHPLSLLSKCTSLKELKQIQAYTIKTNLQSD 60

Query: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGE 120
           ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDI+LFNIMARGYARSNSPYLAFSLF +
Sbjct: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFAQ 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECND 180
           LLCSGLLPDDYTFSSLLKACASSKALR+GMGLHCFAVKLGLNHNIYIC TLINMYAECND
Sbjct: 121 LLCSGLLPDDYTFSSLLKACASSKALRQGMGLHCFAVKLGLNHNIYICPTLINMYAECND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
           MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS+IEPTDVTMLSVIMS
Sbjct: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASDIEPTDVTMLSVIMS 240

Query: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAW 300
           CALLGALDLGKWIHEYVKKKGFDKYVKVNTALID+FAKCGSLTDAISIFEGMRVRDTQAW
Sbjct: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVAFATHGDGLK+IS+FEEMKR GVRPDEITFLGLLYACSHAGLVEQGRGYFYSMS+
Sbjct: 301 SAMIVAFATHGDGLKSISIFEEMKRAGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSR 360

Query: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAK 420
           TYGITPGIKHYGCMVDLLGR G LDEAYNFVD+LEIKPTPILWRTLLSACSTHGNVEMAK
Sbjct: 361 TYGITPGIKHYGCMVDLLGRTGCLDEAYNFVDELEIKPTPILWRTLLSACSTHGNVEMAK 420

Query: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVV 480
           RVIERIFELDD+HGGDYVILSNLYARVGRWEDVNH RKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
           HEFFSGDGVHCVSVELRRALDELMKEIKLVGY+PDTSLVYHADM+EEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYIPDTSLVYHADMDEEGKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600
           AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFH+FEDGKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHQFEDGKCSC 600

Query: 601 GDFW 604
           GDFW
Sbjct: 601 GDFW 604

[Close]

BLAST of Chy10G181990 vs. NCBI nr
Match: XP_038893049.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Benincasa hispida])

HSP 1 Score: 1129 bits (2921), Expect = 0.0
Identity = 548/604 (90.73%), Postives = 576/604 (95.36%), Query Frame = 0


Query: 1   MAISCIPTCQFTLTKPSSAFSKNEFVINQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSD 60
           M +SCIPTCQFTLTKPSS FS NEF INQ +PLSLLSKCTSL +LKQIQAYTIKTNLQ+D
Sbjct: 1   MTVSCIPTCQFTLTKPSSTFSNNEF-INQPHPLSLLSKCTSLRELKQIQAYTIKTNLQND 60

Query: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGE 120
           +SVLTKLIN CT NPTTS MD+AHHLFDQI DKDIVLFNIMARGYARSNSP LAFSLF +
Sbjct: 61  VSVLTKLINICTRNPTTSSMDYAHHLFDQISDKDIVLFNIMARGYARSNSPNLAFSLFAK 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECND 180
           +L SGLLPDDYTFSSLLKACASSKA ++GM LHCFA+KLGLNHNIYIC TLINMYAECND
Sbjct: 121 VLSSGLLPDDYTFSSLLKACASSKAFKQGMELHCFAIKLGLNHNIYICPTLINMYAECND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
           MNAARGVFDE+EQPCIVSYNAIITGYARSSQPNEALSLFRELQAS++EPTDVTMLS+IMS
Sbjct: 181 MNAARGVFDEIEQPCIVSYNAIITGYARSSQPNEALSLFRELQASHLEPTDVTMLSIIMS 240

Query: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAW 300
           CALLGALDLG+WIHEYVKKKGFDKYVKVNTALID+FAKCGSL DAISIFEGMRVRDTQAW
Sbjct: 241 CALLGALDLGRWIHEYVKKKGFDKYVKVNTALIDMFAKCGSLADAISIFEGMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVAFATHGDGLKAISMFEEMKR GVRPDEITFLGLLYACSHAGLVEQGR YFY+MSK
Sbjct: 301 SAMIVAFATHGDGLKAISMFEEMKRTGVRPDEITFLGLLYACSHAGLVEQGREYFYNMSK 360

Query: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAK 420
            YGITPGIKHYGCMVDLLGR G LDEAYNF+D+LEIKPTP+LWRTLLSACSTHGNV+MAK
Sbjct: 361 NYGITPGIKHYGCMVDLLGRTGRLDEAYNFIDELEIKPTPVLWRTLLSACSTHGNVDMAK 420

Query: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVV 480
           RV ERIFELDD+HGGDYVILSNL ARVGRWEDVNH RKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVTERIFELDDSHGGDYVILSNLCARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
           HEFFSGDGVHC+SVELRRALDEL+KEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHCISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600
           AMAFGLLNTPPGTTIRV KNLRICGDCHNAAKLIS IFGR+I+IRDVQRFHRFE+GKCSC
Sbjct: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIIIRDVQRFHRFENGKCSC 600

Query: 601 GDFW 604
            DFW
Sbjct: 601 SDFW 603

[Close]

BLAST of Chy10G181990 vs. NCBI nr
Match: XP_022151060.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 1098 bits (2839), Expect = 0.0
Identity = 534/604 (88.41%), Postives = 566/604 (93.71%), Query Frame = 0


Query: 1   MAISCIPTCQFTLTKPSSAFSKNEFVINQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSD 60
           M ISCIP+CQFTL KP+SAF  NEF  N  +PL LLSKCTSL +LKQIQA+TIKTNLQ+D
Sbjct: 1   MGISCIPSCQFTLAKPNSAFPNNEFT-NPPHPLFLLSKCTSLRELKQIQAFTIKTNLQND 60

Query: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGE 120
           ISVLTK+INFCTLNP+TS MDHAHHLFDQI DKDIVLFNIMARGYARSN+PYLAFSLF +
Sbjct: 61  ISVLTKIINFCTLNPSTSSMDHAHHLFDQIPDKDIVLFNIMARGYARSNTPYLAFSLFSQ 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECND 180
           +LCSGLLPDDYTFSSLLKACASSKA  EG  LHCFA+KLGLNHNIYIC +LIN+YAECND
Sbjct: 121 VLCSGLLPDDYTFSSLLKACASSKAFSEGRQLHCFAIKLGLNHNIYICPSLINLYAECND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
           MNAARGVFDEME PCIVSYNAIITG+ARSSQPNEALSLFRELQASN+EPTDVTMLS+IMS
Sbjct: 181 MNAARGVFDEMEAPCIVSYNAIITGHARSSQPNEALSLFRELQASNLEPTDVTMLSIIMS 240

Query: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAW 300
           CALLGALDLG+WIHEYVKKKGFDK+VKVNTALID++AKCGSL DAISIFE MRVRDTQAW
Sbjct: 241 CALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSLVDAISIFEDMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVA+ATHGDGLKAISMFEEMKR GVRPDEITFLGLLYACSHAGLVE+GRGYF SMSK
Sbjct: 301 SAMIVAYATHGDGLKAISMFEEMKRAGVRPDEITFLGLLYACSHAGLVEEGRGYFNSMSK 360

Query: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAK 420
            YGI PGIKHYGCMVDLLGR GHLDEAY F+D  EIKPTPILWRTLLSACS  GNV++AK
Sbjct: 361 YYGIAPGIKHYGCMVDLLGRTGHLDEAYKFIDGSEIKPTPILWRTLLSACSNRGNVDLAK 420

Query: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVV 480
           RVIERIFELDD+HGGDYVILSNL ARVGRWEDVNH RKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLCARVGRWEDVNHIRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
           HEFFSGDGVH +SVELRRALDEL+KEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHSISVELRRALDELIKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600
           A+AFGLLN+PPGT IRV KNLRICGDCH AAKLISFIFGR+IVIRDVQRFHRFEDGKCSC
Sbjct: 541 AIAFGLLNSPPGTPIRVVKNLRICGDCHTAAKLISFIFGRQIVIRDVQRFHRFEDGKCSC 600

Query: 601 GDFW 604
            DFW
Sbjct: 601 CDFW 603

[Close]

BLAST of Chy10G181990 vs. NCBI nr
Match: XP_023541252.1 (pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1086 bits (2808), Expect = 0.0
Identity = 530/604 (87.75%), Postives = 561/604 (92.88%), Query Frame = 0


Query: 1   MAISCIPTCQFTLTKPSSAFSKNEFVINQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSD 60
           MAISCIPT QF L+KP     KNEF INQ +PLSL SKC+SL +LKQIQAYTIKTNL +D
Sbjct: 1   MAISCIPTSQFALSKP-----KNEF-INQPHPLSLFSKCSSLRELKQIQAYTIKTNLHND 60

Query: 61  ISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGE 120
           ISVLTKLINFCT NPT S MDHAHHLFD++LDKDIVLFNIMARGYARSNSPYL FSLF +
Sbjct: 61  ISVLTKLINFCTRNPTISSMDHAHHLFDKMLDKDIVLFNIMARGYARSNSPYLVFSLFAQ 120

Query: 121 LLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECND 180
           +LCSGLLPDDYTFSSLLKACA SKAL EG  LHCFA+KLGL HNIYIC TLINMYA CND
Sbjct: 121 VLCSGLLPDDYTFSSLLKACAGSKALEEGRQLHCFAIKLGLGHNIYICPTLINMYAACND 180

Query: 181 MNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMS 240
           MNAARGVFD ME+PCIVSYNAIITGYARSSQPNEALSLFRELQASN+EPTDVTMLS+IMS
Sbjct: 181 MNAARGVFDGMEEPCIVSYNAIITGYARSSQPNEALSLFRELQASNLEPTDVTMLSIIMS 240

Query: 241 CALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAW 300
           CALLGALDLG+WIHEYVKKKGFDK+VKVNTALID++AKCGS+ DAISIFEGMRVRDTQAW
Sbjct: 241 CALLGALDLGRWIHEYVKKKGFDKFVKVNTALIDMYAKCGSIVDAISIFEGMRVRDTQAW 300

Query: 301 SAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSK 360
           SAMIVAFATHGDGLKAISMFEEMK+ GVRPDEITFLGLLYACSHAGLVE+GRGYFYSM K
Sbjct: 301 SAMIVAFATHGDGLKAISMFEEMKKAGVRPDEITFLGLLYACSHAGLVEEGRGYFYSMYK 360

Query: 361 TYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAK 420
            +GITPGIKHYGCMVDLLGR G LDEAY F+D+L IKPTPILWRTLLSACS HGNV++AK
Sbjct: 361 NHGITPGIKHYGCMVDLLGRTGRLDEAYKFIDELAIKPTPILWRTLLSACSNHGNVDLAK 420

Query: 421 RVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVV 480
           RVIERIFELDD+HGGDYVILSNL AR+GRWEDVN  RKLMKDRGVVKVPGCSSVEVNNVV
Sbjct: 421 RVIERIFELDDSHGGDYVILSNLCARLGRWEDVNRLRKLMKDRGVVKVPGCSSVEVNNVV 480

Query: 481 HEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKL 540
           HEFFSGDGVH +SVELRRALDEL+KEIKL GYVPDTSLVYHADMEEE KELVLRYHSEKL
Sbjct: 481 HEFFSGDGVHSISVELRRALDELIKEIKLAGYVPDTSLVYHADMEEEAKELVLRYHSEKL 540

Query: 541 AMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSC 600
           AMAFGLLNTPPGTTIRV KNLRICGDCHNAAKLIS IFGR+IVIRDVQRFHRFEDG+CSC
Sbjct: 541 AMAFGLLNTPPGTTIRVVKNLRICGDCHNAAKLISLIFGRQIVIRDVQRFHRFEDGQCSC 598

Query: 601 GDFW 604
            DFW
Sbjct: 601 CDFW 598

[Close]

BLAST of Chy10G181990 vs. TAIR 10
Match: AT2G02980.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 834.3 bits (2154), Expect = 6.1e-242
Identity = 391/590 (66.27%), Postives = 481/590 (81.53%), Query Frame = 0


Query: 17  SSAFSKNEFV--INQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSDISVLTKLINFCTLN 76
           +  F+K+  +  +N  NP+ L+SKC SL +L QIQAY IK++++ D+S + KLINFCT +
Sbjct: 15  AETFTKHSKIDTVNTQNPILLISKCNSLRELMQIQAYAIKSHIE-DVSFVAKLINFCTES 74

Query: 77  PTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFS 136
           PT S M +A HLF+ + + DIV+FN MARGY+R  +P   FSLF E+L  G+LPD+YTF 
Sbjct: 75  PTESSMSYARHLFEAMSEPDIVIFNSMARGYSRFTNPLEVFSLFVEILEDGILPDNYTFP 134

Query: 137 SLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECNDMNAARGVFDEMEQP 196
           SLLKACA +KAL EG  LHC ++KLGL+ N+Y+C TLINMY EC D+++AR VFD + +P
Sbjct: 135 SLLKACAVAKALEEGRQLHCLSMKLGLDDNVYVCPTLINMYTECEDVDSARCVFDRIVEP 194

Query: 197 CIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIH 256
           C+V YNA+ITGYAR ++PNEALSLFRE+Q   ++P ++T+LSV+ SCALLG+LDLGKWIH
Sbjct: 195 CVVCYNAMITGYARRNRPNEALSLFREMQGKYLKPNEITLLSVLSSCALLGSLDLGKWIH 254

Query: 257 EYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGL 316
           +Y KK  F KYVKVNTALID+FAKCGSL DA+SIFE MR +DTQAWSAMIVA+A HG   
Sbjct: 255 KYAKKHSFCKYVKVNTALIDMFAKCGSLDDAVSIFEKMRYKDTQAWSAMIVAYANHGKAE 314

Query: 317 KAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCM 376
           K++ MFE M+ E V+PDEITFLGLL ACSH G VE+GR YF  M   +GI P IKHYG M
Sbjct: 315 KSMLMFERMRSENVQPDEITFLGLLNACSHTGRVEEGRKYFSQMVSKFGIVPSIKHYGSM 374

Query: 377 VDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHG 436
           VDLL RAG+L++AY F+DKL I PTP+LWR LL+ACS+H N+++A++V ERIFELDD+HG
Sbjct: 375 VDLLSRAGNLEDAYEFIDKLPISPTPMLWRILLAACSSHNNLDLAEKVSERIFELDDSHG 434

Query: 437 GDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSV 496
           GDYVILSNLYAR  +WE V+  RK+MKDR  VKVPGCSS+EVNNVVHEFFSGDGV   + 
Sbjct: 435 GDYVILSNLYARNKKWEYVDSLRKVMKDRKAVKVPGCSSIEVNNVVHEFFSGDGVKSATT 494

Query: 497 ELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTT 556
           +L RALDE++KE+KL GYVPDTS+V HA+M ++ KE+ LRYHSEKLA+ FGLLNTPPGTT
Sbjct: 495 KLHRALDEMVKELKLSGYVPDTSMVVHANMNDQEKEITLRYHSEKLAITFGLLNTPPGTT 554

Query: 557 IRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 605
           IRV KNLR+C DCHNAAKLIS IFGRK+V+RDVQRFH FEDGKCSCGDFW
Sbjct: 555 IRVVKNLRVCRDCHNAAKLISLIFGRKVVLRDVQRFHHFEDGKCSCGDFW 603

[Close]

BLAST of Chy10G181990 vs. TAIR 10
Match: AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 502.3 bits (1292), Expect = 5.5e-142
Identity = 237/608 (38.98%), Postives = 368/608 (60.53%), Query Frame = 0


Query: 28  NQLNPLSLLSKCTSLNQLKQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLF 87
           N    +S L +C+   +LKQI A  +KT L  D   +TK ++FC  + ++ ++ +A  +F
Sbjct: 13  NLYETMSCLQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVF 72

Query: 88  DQILDKDIVLFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALR 147
           D     D  L+N+M RG++ S+ P  +  L+  +LCS    + YTF SLLKAC++  A  
Sbjct: 73  DGFDRPDTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE 132

Query: 148 EGMGLHCFAVKLGLNHNIYICSTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYA 207
           E   +H    KLG  +++Y  ++LIN YA   +   A  +FD + +P  VS+N++I GY 
Sbjct: 133 ETTQIHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYV 192

Query: 208 RSSQPN-------------------------------EALSLFRELQASNIEPTDVTMLS 267
           ++ + +                               EAL LF E+Q S++EP +V++ +
Sbjct: 193 KAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLAN 252

Query: 268 VIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRD 327
            + +CA LGAL+ GKWIH Y+ K        +   LID++AKCG + +A+ +F+ ++ + 
Sbjct: 253 ALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKS 312

Query: 328 TQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFY 387
            QAW+A+I  +A HG G +AIS F EM++ G++P+ ITF  +L ACS+ GLVE+G+  FY
Sbjct: 313 VQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFY 372

Query: 388 SMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNV 447
           SM + Y + P I+HYGC+VDLLGRAG LDEA  F+ ++ +KP  ++W  LL AC  H N+
Sbjct: 373 SMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPNAVIWGALLKACRIHKNI 432

Query: 448 EMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEV 507
           E+ + + E +  +D  HGG YV  +N++A   +W+     R+LMK++GV KVPGCS++ +
Sbjct: 433 ELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETRRLMKEQGVAKVPGCSTISL 492

Query: 508 NNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYH 567
               HEF +GD  H    +++     + ++++  GYVP+   +    ++++ +E ++  H
Sbjct: 493 EGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELEEMLLDLVDDDEREAIVHQH 552

Query: 568 SEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDG 605
           SEKLA+ +GL+ T PGT IR+ KNLR+C DCH   KLIS I+ R IV+RD  RFH F DG
Sbjct: 553 SEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKIYKRDIVMRDRTRFHHFRDG 612

[Close]

BLAST of Chy10G181990 vs. TAIR 10
Match: AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 493.4 bits (1269), Expect = 2.5e-139
Identity = 238/602 (39.53%), Postives = 368/602 (61.13%), Query Frame = 0


Query: 33  LSLLSKCTSLNQLKQIQAYTIKTNLQSDISVLTKLINFCTLN------------------ 92
           L   +K  +  + +QI  + +K     D+ V T LI+    N                  
Sbjct: 141 LKSCAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDV 200

Query: 93  ----------PTTSYMDHAHHLFDQILDKDIVLFNIMARGYARSNSPYLAFSLFGELLCS 152
                      +  Y+++A  LFD+I  KD+V +N M  GYA + +   A  LF +++ +
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260

Query: 153 GLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICSTLINMYAECNDMNAA 212
            + PD+ T  +++ ACA S ++  G  +H +    G   N+ I + LI++Y++C ++  A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320

Query: 213 RGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALL 272
            G+F+ +    ++S+N +I GY   +   EAL LF+E+  S   P DVTMLS++ +CA L
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380

Query: 273 GALDLGKWIHEYVKK--KGFDKYVKVNTALIDLFAKCGSLTDAISIFEGMRVRDTQAWSA 332
           GA+D+G+WIH Y+ K  KG      + T+LID++AKCG +  A  +F  +  +   +W+A
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440

Query: 333 MIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTY 392
           MI  FA HG    +  +F  M++ G++PD+ITF+GLL ACSH+G+++ GR  F +M++ Y
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 500

Query: 393 GITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRTLLSACSTHGNVEMAKRV 452
            +TP ++HYGCM+DLLG +G   EA   ++ +E++P  ++W +LL AC  HGNVE+ +  
Sbjct: 501 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 560

Query: 453 IERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGVVKVPGCSSVEVNNVVHE 512
            E + +++  + G YV+LSN+YA  GRW +V   R L+ D+G+ KVPGCSS+E+++VVHE
Sbjct: 561 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 620

Query: 513 FFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAM 572
           F  GD  H  + E+   L+E+   ++  G+VPDTS V   +MEEE KE  LR+HSEKLA+
Sbjct: 621 FIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQ-EMEEEWKEGALRHHSEKLAI 680

Query: 573 AFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGD 605
           AFGL++T PGT + + KNLR+C +CH A KLIS I+ R+I+ RD  RFH F DG CSC D
Sbjct: 681 AFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCND 740

[Close]

BLAST of Chy10G181990 vs. TAIR 10
Match: AT1G11290.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 486.5 bits (1251), Expect = 3.1e-137
Identity = 234/559 (41.86%), Postives = 356/559 (63.69%), Query Frame = 0


Query: 46  KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDKDIVLFNIMARGY 105
           K+I  Y +++   S +++ T L++   +      ++ A  LFD +L++++V +N M   Y
Sbjct: 256 KEIHGYAMRSGFDSLVNISTALVD---MYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 315

Query: 106 ARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNI 165
            ++ +P  A  +F ++L  G+ P D +    L ACA    L  G  +H  +V+LGL+ N+
Sbjct: 316 VQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNV 375

Query: 166 YICSTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFRELQAS 225
            + ++LI+MY +C +++ A  +F +++   +VS+NA+I G+A++ +P +AL+ F ++++ 
Sbjct: 376 SVVNSLISMYCKCKEVDTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSR 435

Query: 226 NIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLFAKCGSLTDA 285
            ++P   T +SVI + A L      KWIH  V +   DK V V TAL+D++AKCG++  A
Sbjct: 436 TVKPDTFTYVSVITAIAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIA 495

Query: 286 ISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHA 345
             IF+ M  R    W+AMI  + THG G  A+ +FEEM++  ++P+ +TFL ++ ACSH+
Sbjct: 496 RLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHS 555

Query: 346 GLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLEIKPTPILWRT 405
           GLVE G   FY M + Y I   + HYG MVDLLGRAG L+EA++F+ ++ +KP   ++  
Sbjct: 556 GLVEAGLKCFYMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGA 615

Query: 406 LLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNHWRKLMKDRGV 465
           +L AC  H NV  A++  ER+FEL+   GG +V+L+N+Y     WE V   R  M  +G+
Sbjct: 616 MLGACQIHKNVNFAEKAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGL 675

Query: 466 VKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPDTSLVYHADME 525
            K PGCS VE+ N VH FFSG   H  S ++   L++L+  IK  GYVPDT+LV    +E
Sbjct: 676 RKTPGCSMVEIKNEVHSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLV--LGVE 735

Query: 526 EEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLISFIFGRKIVIR 585
            + KE +L  HSEKLA++FGLLNT  GTTI V KNLR+C DCHNA K IS + GR+IV+R
Sbjct: 736 NDVKEQLLSTHSEKLAISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVR 795

Query: 586 DVQRFHRFEDGKCSCGDFW 605
           D+QRFH F++G CSCGD+W
Sbjct: 796 DMQRFHHFKNGACSCGDYW 809

[Close]

BLAST of Chy10G181990 vs. TAIR 10
Match: AT4G21065.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 483.8 bits (1244), Expect = 2.0e-136
Identity = 238/569 (41.83%), Postives = 371/569 (65.20%), Query Frame = 0


Query: 40  TSLNQLKQIQAYTIKTNLQ-SDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDK-DIVL 99
           +S+ +L+QI A++I+  +  SD  +   LI +    P+   M +AH +F +I    ++ +
Sbjct: 28  SSITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFI 87

Query: 100 FNIMARGYARSNSPYLAFSLFGELLCSGLL-PDDYTFSSLLKACASSKALREGMGLHCFA 159
           +N + RGYA   +   AFSL+ E+  SGL+ PD +T+  L+KA  +   +R G  +H   
Sbjct: 88  WNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVV 147

Query: 160 VKLGLNHNIYICSTLINMYAECNDMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEAL 219
           ++ G    IY+ ++L+++YA C D+ +A  VFD+M +  +V++N++I G+A + +P EAL
Sbjct: 148 IRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEAL 207

Query: 220 SLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDLF 279
           +L+ E+ +  I+P   T++S++ +CA +GAL LGK +H Y+ K G  + +  +  L+DL+
Sbjct: 208 ALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLY 267

Query: 280 AKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLKAISMFEEMK-REGVRPDEITF 339
           A+CG + +A ++F+ M  +++ +W+++IV  A +G G +AI +F+ M+  EG+ P EITF
Sbjct: 268 ARCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITF 327

Query: 340 LGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLE 399
           +G+LYACSH G+V++G  YF  M + Y I P I+H+GCMVDLL RAG + +AY ++  + 
Sbjct: 328 VGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMP 387

Query: 400 IKPTPILWRTLLSACSTHGNVEMAKRVIERIFELDDAHGGDYVILSNLYARVGRWEDVNH 459
           ++P  ++WRTLL AC+ HG+ ++A+    +I +L+  H GDYV+LSN+YA   RW DV  
Sbjct: 388 MQPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQK 447

Query: 460 WRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVSVELRRALDELMKEIKLVGYVPD 519
            RK M   GV KVPG S VEV N VHEF  GD  H  S  +   L E+   ++  GYVP 
Sbjct: 448 IRKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQ 507

Query: 520 TSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGTTIRVAKNLRICGDCHNAAKLIS 579
            S VY  D+EEE KE  + YHSEK+A+AF L++TP  + I V KNLR+C DCH A KL+S
Sbjct: 508 ISNVY-VDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVS 567

Query: 580 FIFGRKIVIRDVQRFHRFEDGKCSCGDFW 605
            ++ R+IV+RD  RFH F++G CSC D+W
Sbjct: 568 KVYNREIVVRDRSRFHHFKNGSCSCQDYW 595

The following BLAST results are available for this feature:

BLAST of Chy10G181990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LK93	8.6e-241	66.27	Pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Arabidop...	[more]
Q9FJY7	7.7e-141	38.98	Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX...	[more]
Q9LN01	3.6e-138	39.53	Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidop...	[more]
Q3E6Q1	4.4e-136	41.86	Pentatricopeptide repeat-containing protein At1g11290, chloroplastic OS=Arabidop...	[more]
A8MQA3	2.8e-135	41.83	Pentatricopeptide repeat-containing protein At4g21065 OS=Arabidopsis thaliana OX...	[more]

BLAST of Chy10G181990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KU15	0.0e+00	98.84	DYW_deaminase domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G6051...	[more]
A0A5A7STH8	0.0e+00	96.19	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3BFK0	0.0e+00	96.19	pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucumis ...	[more]
A0A6J1DA68	0.0e+00	88.41	pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 ...	[more]
A0A6J1HTT7	0.0e+00	87.42	pentatricopeptide repeat-containing protein At2g02980, chloroplastic OS=Cucurbit...	[more]

BLAST of Chy10G181990 vs. NCBI nr


Match Name	Identity	Description
XP_031742214.1	98.84	pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucumis sa...	[more]
XP_008446357.1	96.19	PREDICTED: pentatricopeptide repeat-containing protein At2g02980, chloroplastic ...	[more]
XP_038893049.1	90.73	pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Benincasa ...	[more]
XP_022151060.1	88.41	pentatricopeptide repeat-containing protein At2g02980, chloroplastic isoform X1 ...	[more]
XP_023541252.1	87.75	pentatricopeptide repeat-containing protein At2g02980, chloroplastic [Cucurbita ...	[more]

BLAST of Chy10G181990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G02980.1	6.1e-242	66.27	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT5G66520.1	5.5e-142	38.98	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G08070.1	2.5e-139	39.53	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G11290.1	3.1e-137	41.86	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT4G21065.1	2.0e-136	41.83	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032867	DYW domain	PFAM	PF14432	DYW_deaminase	coord: 469..594 e-value: 1.4E-37 score: 128.4
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 299..332 e-value: 1.1E-6 score: 26.5 coord: 166..192 e-value: 7.3E-4 score: 17.5 coord: 96..129 e-value: 6.5E-4 score: 17.7 coord: 197..230 e-value: 7.7E-8 score: 30.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 270..295 e-value: 0.02 score: 15.1 coord: 402..426 e-value: 0.11 score: 12.7 coord: 371..394 e-value: 0.41 score: 11.0 coord: 437..465 e-value: 1.0 score: 9.8 coord: 167..192 e-value: 0.0052 score: 16.9
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 194..241 e-value: 2.6E-10 score: 40.3 coord: 296..342 e-value: 9.0E-10 score: 38.6 coord: 93..141 e-value: 3.4E-9 score: 36.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 195..229 score: 11.717688
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 296..330 score: 11.717688
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 94..128 score: 9.777537
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 153..247 e-value: 1.6E-22 score: 81.8 coord: 14..152 e-value: 1.1E-15 score: 59.5
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 248..362 e-value: 1.4E-23 score: 85.8 coord: 363..530 e-value: 1.2E-14 score: 56.5
None	No IPR available	PANTHER	PTHR47926	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN	coord: 25..590
None	No IPR available	PANTHER	PTHR47926:SF132	BNAA02G26650D PROTEIN	coord: 25..590

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G181990.1	Chy10G181990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900865	chloroplast RNA modification
biological_process	GO:0031425	chloroplast RNA processing
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0005515	protein binding
molecular_function	GO:0008270	zinc ion binding