Chy10G181260 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G181260
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like
Location	chrH10: 14949841 .. 14950537 (-)
RNA-Seq Expression	Chy10G181260
Synteny	Chy10G181260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTGGACTACAACATCTCCTTCTTTCAATCTCCTCCCTTCTCTTTTCTTCCCCTTCCATAAACCTTCTCTTCCACCATCCTTCTTCTCTAATAACCCTTCAACCCCTCTTCGCCTCTCCCCCACCCTCACACTACCCTCCTCCTCCTCCTCCTCCTTCCCAACTCACATTTGCACCGCCGCCGAATACAAATTCCCCGACCCAATTCCCGAATTCGCCGTCGCCGTAAGTTTCCCTTTCCCCTCTCTTCCCATCATTTCCATTTCTCTTCAGTTTCACTTACAAATTCTTCTCTCTTCAGGAAACCGAGAAGTTCAGGGCTCATCTCCTTCAAAAGCTCGCTAAGAGAGATATTTACGGGGATTCACTTCAGCAGGTCGTCGGAATATGCACTGAGGTATGTATGAAATATCATGAATGCTCTCACCTTCTATCTTAATTTGACATTAATATTATTACTCTTACTCTTTATTACTTATGCTGTTGTTCTCAACAACAGATATTCAATACCTTTATGCATACCGAGTATGGCGGACCTGGAACTTTGTTAGTTTTACCTTTTATTGATATGTCTGATGCTATCAACGAACGAGGACTACCGGGAGGCCCTCAAGCTGCTCGTGCTGCGGTCAAATGGGCTCAAGATCATGTTGATAAAGACTGGAATCAGTGGACTGGTGATGATGCCACCTAA

mRNA sequence

ATGGCGTGGACTACAACATCTCCTTCTTTCAATCTCCTCCCTTCTCTTTTCTTCCCCTTCCATAAACCTTCTCTTCCACCATCCTTCTTCTCTAATAACCCTTCAACCCCTCTTCGCCTCTCCCCCACCCTCACACTACCCTCCTCCTCCTCCTCCTCCTTCCCAACTCACATTTGCACCGCCGCCGAATACAAATTCCCCGACCCAATTCCCGAATTCGCCGTCGCCGAAACCGAGAAGTTCAGGGCTCATCTCCTTCAAAAGCTCGCTAAGAGAGATATTTACGGGGATTCACTTCAGCAGGTCGTCGGAATATGCACTGAGATATTCAATACCTTTATGCATACCGAGTATGGCGGACCTGGAACTTTGTTAGTTTTACCTTTTATTGATATGTCTGATGCTATCAACGAACGAGGACTACCGGGAGGCCCTCAAGCTGCTCGTGCTGCGGTCAAATGGGCTCAAGATCATGTTGATAAAGACTGGAATCAGTGGACTGGTGATGATGCCACCTAA

Coding sequence (CDS)

ATGGCGTGGACTACAACATCTCCTTCTTTCAATCTCCTCCCTTCTCTTTTCTTCCCCTTCCATAAACCTTCTCTTCCACCATCCTTCTTCTCTAATAACCCTTCAACCCCTCTTCGCCTCTCCCCCACCCTCACACTACCCTCCTCCTCCTCCTCCTCCTTCCCAACTCACATTTGCACCGCCGCCGAATACAAATTCCCCGACCCAATTCCCGAATTCGCCGTCGCCGAAACCGAGAAGTTCAGGGCTCATCTCCTTCAAAAGCTCGCTAAGAGAGATATTTACGGGGATTCACTTCAGCAGGTCGTCGGAATATGCACTGAGATATTCAATACCTTTATGCATACCGAGTATGGCGGACCTGGAACTTTGTTAGTTTTACCTTTTATTGATATGTCTGATGCTATCAACGAACGAGGACTACCGGGAGGCCCTCAAGCTGCTCGTGCTGCGGTCAAATGGGCTCAAGATCATGTTGATAAAGACTGGAATCAGTGGACTGGTGATGATGCCACCTAA

Protein sequence

MAWTTTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPLRLSPTLTLPSSSSSSFPTHICTAAEYKFPDPIPEFAVAETEKFRAHLLQKLAKRDIYGDSLQQVVGICTEIFNTFMHTEYGGPGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT*

Homology

[Close]

BLAST of Chy10G181260 vs. ExPASy Swiss-Prot
Match: Q9XIK0 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PRIN2 PE=1 SV=1)

HSP 1 Score: 199.9 bits (507), Expect = 2.3e-50
Identity = 89/123 (72.36%), Postives = 105/123 (85.37%), Query Frame = 0


Query: 48  SSSSSSFPTHICTAAEYKFPDPIPEFAVAETEKFRAHLLQKLAKRDIYGDSLQQVVGICT 107
           S SS S    +C AAEYKFPDPIPEFA AETEKFR H+L KL+KRD++ DS+ ++VG+CT
Sbjct: 57  SLSSLSRRGFVCRAAEYKFPDPIPEFAEAETEKFRDHMLNKLSKRDLFEDSVDEIVGVCT 116

Query: 108 EIFNTFMHTEYGGPGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWT 167
           EIF TF+ +EYGGPGTLLV+PFIDM+D +NER LPGGPQAARAA+KWAQDHVDKDW +WT
Sbjct: 117 EIFETFLRSEYGGPGTLLVIPFIDMADTLNERELPGGPQAARAAIKWAQDHVDKDWKEWT 176

Query: 168 GDD 171
           G D
Sbjct: 177 GTD 179

[Close]

BLAST of Chy10G181260 vs. ExPASy Swiss-Prot
Match: B6UFC7 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Zea mays OX=4577 GN=PRIN2 PE=2 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 2.8e-35
Identity = 65/109 (59.63%), Postives = 81/109 (74.31%), Query Frame = 0


Query: 63  EYKFPDPIPEFAVAETEKFRAHLLQKL--AKRDIYGDSLQQVVGICTEIFNTFMHTEYGG 122
           +YKFPDPIPEFA  ET KFR H+  +L   K D +GD ++++V +CTEI  TF+  +Y G
Sbjct: 64  DYKFPDPIPEFAEQETSKFREHMAWRLEQKKEDYFGDHVEEIVDVCTEIMGTFLENDYRG 123

Query: 123 PGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGD 170
           PGTLLV PF+DM   I ERGLPG PQAARAA+ WA+ +VDKDW  WTG+
Sbjct: 124 PGTLLVHPFLDMKGEIKERGLPGAPQAARAAIAWAEKNVDKDWKAWTGE 172

[Close]

BLAST of Chy10G181260 vs. ExPASy Swiss-Prot
Match: Q6H612 (Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=PRIN2 PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 2.4e-34
Identity = 62/109 (56.88%), Postives = 82/109 (75.23%), Query Frame = 0


Query: 63  EYKFPDPIPEFAVAETEKFRAHLLQKL--AKRDIYGDSLQQVVGICTEIFNTFMHTEYGG 122
           +YKFPDPIPEFA  ET KF+ H++ +L   K D +G+ ++++V +CTEI  TF+  +Y G
Sbjct: 63  DYKFPDPIPEFAAQETSKFKEHMMWRLEQKKDDYFGEHVEEIVDVCTEILGTFLEHDYCG 122

Query: 123 PGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGD 170
           PGTLLV PF+DM   I ERGLPG PQAARAA+ WA+ ++DKDW  WTG+
Sbjct: 123 PGTLLVHPFLDMKGEIKERGLPGAPQAARAAIAWAEKNIDKDWKAWTGE 171

[Close]

BLAST of Chy10G181260 vs. ExPASy TrEMBL
Match: A0A0A0KTS5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603340 PE=4 SV=1)

HSP 1 Score: 347.4 bits (890), Expect = 3.4e-92
Identity = 168/172 (97.67%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MAWTTTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPLRLSPTLTLPSSSSSSFPTHICT 60
           MAWTTTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPLRLSPTLTLP   SSSFPTHICT
Sbjct: 1   MAWTTTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPLRLSPTLTLP---SSSFPTHICT 60

Query: 61  AAEYKFPDPIPEFAVAETEKFRAHLLQKLAKRDIYGDSLQQVVGICTEIFNTFMHTEYGG 120
           AAEYKFPDPIPEFAVAETEKFRAHLLQKL+KRDIYGDSLQQVVGICTEIFNTFMHTEYGG
Sbjct: 61  AAEYKFPDPIPEFAVAETEKFRAHLLQKLSKRDIYGDSLQQVVGICTEIFNTFMHTEYGG 120

Query: 121 PGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 173
           PGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT
Sbjct: 121 PGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 169

[Close]

BLAST of Chy10G181260 vs. ExPASy TrEMBL
Match: A0A1S3BEL5 (uncharacterized protein LOC103489037 OS=Cucumis melo OX=3656 GN=LOC103489037 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 162/172 (94.19%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MAWTTTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPLRLSPTLTLPSSSSSSFPTHICT 60
           MAW TTSPSFNLLP LFF FHKPSLP SFFSNNPS P RLSPTLTLP SSSSSFPTHICT
Sbjct: 1   MAW-TTSPSFNLLPPLFFSFHKPSLPLSFFSNNPSAPPRLSPTLTLP-SSSSSFPTHICT 60

Query: 61  AAEYKFPDPIPEFAVAETEKFRAHLLQKLAKRDIYGDSLQQVVGICTEIFNTFMHTEYGG 120
           AAEYKFPDPIPEFAVAETEKFRAHLLQKL+K+DIYGDSLQQVVGICTEIFNTFMHTEYGG
Sbjct: 61  AAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSLQQVVGICTEIFNTFMHTEYGG 120

Query: 121 PGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 173
           PGTLLVLPFIDMSD INERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT
Sbjct: 121 PGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 170

[Close]

BLAST of Chy10G181260 vs. ExPASy TrEMBL
Match: A0A6J1KAW7 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111492617 PE=4 SV=1)

HSP 1 Score: 276.9 bits (707), Expect = 5.6e-71
Identity = 139/175 (79.43%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 1   MAWTTTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPL---RLSPTLTLPSSSSSSFPTH 60
           MAWTT  P+F+LLP L F  HKP+ PP FFS NPS+ L   RLSPTL LP   SSSF   
Sbjct: 1   MAWTTV-PAFHLLPPL-FALHKPTAPPCFFS-NPSSALQHTRLSPTLRLPFQPSSSFGNQ 60

Query: 61  ICTAAEYKFPDPIPEFAVAETEKFRAHLLQKLAKRDIYGDSLQQVVGICTEIFNTFMHTE 120
           IC AAEYKFPDPIPEFA+AETEKFRAHLL KL+K+DIYGDS+Q+VVG+CTEIFNTFMHTE
Sbjct: 61  ICRAAEYKFPDPIPEFAIAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTE 120

Query: 121 YGGPGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 173
           YGGPGTLLVLPFIDMSD INERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDD T
Sbjct: 121 YGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 172

[Close]

BLAST of Chy10G181260 vs. ExPASy TrEMBL
Match: A0A6J1GWZ9 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111458286 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.1e-70
Identity = 141/176 (80.11%), Postives = 151/176 (85.80%), Query Frame = 0


Query: 1   MAWTTTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPL---RLSPTLTLP-SSSSSSFPT 60
           MAWTT  P+F+LLP L F  HKP+ PP FFS NPS+ L   RLSPTL LP   SSSSF  
Sbjct: 1   MAWTTV-PAFHLLPPL-FALHKPTAPPCFFS-NPSSALQHTRLSPTLRLPFQPSSSSFGN 60

Query: 61  HICTAAEYKFPDPIPEFAVAETEKFRAHLLQKLAKRDIYGDSLQQVVGICTEIFNTFMHT 120
            IC AAEYKFPDPIPEFAVAETEKFRAHLL KL+K+DIYGDS+Q+VVG+CTEIFNTFMHT
Sbjct: 61  QICRAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHT 120

Query: 121 EYGGPGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 173
           EYGGPGTLLVLPFIDMSD INERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDD T
Sbjct: 121 EYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 173

[Close]

BLAST of Chy10G181260 vs. ExPASy TrEMBL
Match: A0A6J1DCY7 (protein PLASTID REDOX INSENSITIVE 2-like OS=Momordica charantia OX=3673 GN=LOC111019216 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 4.7e-62
Identity = 127/171 (74.27%), Postives = 137/171 (80.12%), Query Frame = 0


Query: 5   TTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPL---RLSPTLTLPSSSSSSFPTHICTA 64
           T +P  +L PSL     KPS+ P  F  NPS PL   RLSPTL LP          IC A
Sbjct: 6   TIAPPLHLPPSLV--TLKPSIIPLRFFPNPSAPLHRTRLSPTLNLPYPLPGE---RICRA 65

Query: 65  AEYKFPDPIPEFAVAETEKFRAHLLQKLAKRDIYGDSLQQVVGICTEIFNTFMHTEYGGP 124
           AEYKFPDPIPEFAVAETEKFRAHLL KL+K+D+YGDS+ +VVGICTEIFNTFMHTEYGGP
Sbjct: 66  AEYKFPDPIPEFAVAETEKFRAHLLNKLSKKDMYGDSVPEVVGICTEIFNTFMHTEYGGP 125

Query: 125 GTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 173
           GTLLV+PFIDMSD INERGLPGGPQAARAAVKWAQDHVDKDWN+WTGDD T
Sbjct: 126 GTLLVVPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNEWTGDDGT 171

[Close]

BLAST of Chy10G181260 vs. NCBI nr
Match: XP_004135224.1 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic [Cucumis sativus] >KGN51837.1 hypothetical protein Csa_009219 [Cucumis sativus])

HSP 1 Score: 346 bits (887), Expect = 4.54e-120
Identity = 168/172 (97.67%), Postives = 169/172 (98.26%), Query Frame = 0


Query: 1   MAWTTTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPLRLSPTLTLPSSSSSSFPTHICT 60
           MAWTTTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPLRLSPTLTLPS   SSFPTHICT
Sbjct: 1   MAWTTTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPLRLSPTLTLPS---SSFPTHICT 60

Query: 61  AAEYKFPDPIPEFAVAETEKFRAHLLQKLAKRDIYGDSLQQVVGICTEIFNTFMHTEYGG 120
           AAEYKFPDPIPEFAVAETEKFRAHLLQKL+KRDIYGDSLQQVVGICTEIFNTFMHTEYGG
Sbjct: 61  AAEYKFPDPIPEFAVAETEKFRAHLLQKLSKRDIYGDSLQQVVGICTEIFNTFMHTEYGG 120

Query: 121 PGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 172
           PGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT
Sbjct: 121 PGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 169

[Close]

BLAST of Chy10G181260 vs. NCBI nr
Match: XP_008446250.1 (PREDICTED: uncharacterized protein LOC103489037 [Cucumis melo])

HSP 1 Score: 326 bits (836), Expect = 2.82e-112
Identity = 162/172 (94.19%), Postives = 164/172 (95.35%), Query Frame = 0


Query: 1   MAWTTTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPLRLSPTLTLPSSSSSSFPTHICT 60
           MAWTT SPSFNLLP LFF FHKPSLP SFFSNNPS P RLSPTLTLPSSS SSFPTHICT
Sbjct: 1   MAWTT-SPSFNLLPPLFFSFHKPSLPLSFFSNNPSAPPRLSPTLTLPSSS-SSFPTHICT 60

Query: 61  AAEYKFPDPIPEFAVAETEKFRAHLLQKLAKRDIYGDSLQQVVGICTEIFNTFMHTEYGG 120
           AAEYKFPDPIPEFAVAETEKFRAHLLQKL+K+DIYGDSLQQVVGICTEIFNTFMHTEYGG
Sbjct: 61  AAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSLQQVVGICTEIFNTFMHTEYGG 120

Query: 121 PGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 172
           PGTLLVLPFIDMSD INERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT
Sbjct: 121 PGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 170

[Close]

BLAST of Chy10G181260 vs. NCBI nr
Match: XP_038891304.1 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 288 bits (738), Expect = 3.71e-97
Identity = 151/180 (83.89%), Postives = 159/180 (88.33%), Query Frame = 0


Query: 1   MAWTTTSPSFNLLPSL--FFPFHKPSLPPSFFSNNPSTPL---RLS-PTLTLP--SSSSS 60
           M WTT+S SF+LLPS    FP HKP+LPPSFFSN PSTPL   RLS  TLTLP   SSSS
Sbjct: 5   MVWTTSS-SFHLLPSSSSLFPLHKPNLPPSFFSN-PSTPLHHKRLSLTTLTLPFQPSSSS 64

Query: 61  SFPTHICTAAEYKFPDPIPEFAVAETEKFRAHLLQKLAKRDIYGDSLQQVVGICTEIFNT 120
           SFP HIC AAEYKFPDPIPEFAVAETEKFRAHLLQKL+K+DIYGDS+ +VVGICTEIFNT
Sbjct: 65  SFPNHICRAAEYKFPDPIPEFAVAETEKFRAHLLQKLSKKDIYGDSVHEVVGICTEIFNT 124

Query: 121 FMHTEYGGPGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 172
           FMHTEYGGPGTLLVLPFIDMSD INERGLPGGPQAARAAVKWAQDHVDKDWN WTGDD+T
Sbjct: 125 FMHTEYGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQDHVDKDWNHWTGDDST 182

[Close]

BLAST of Chy10G181260 vs. NCBI nr
Match: XP_023549642.1 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023549649.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023549656.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita pepo subsp. pepo] >XP_023549666.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 275 bits (703), Expect = 5.67e-92
Identity = 140/175 (80.00%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 1   MAWTTTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPL---RLSPTLTLPSSSSSSFPTH 60
           MAWTT  P+F+LLP LF   HKP+ PP FFSN PS+ L   RLSPTL LP   SSSF   
Sbjct: 1   MAWTTV-PAFHLLPPLF-ALHKPNSPPCFFSN-PSSALQHTRLSPTLRLPFQPSSSFGNQ 60

Query: 61  ICTAAEYKFPDPIPEFAVAETEKFRAHLLQKLAKRDIYGDSLQQVVGICTEIFNTFMHTE 120
           IC AAEYKFPDPIPEFAVAETEKFRAHLL KL+K+DIYGDS+Q+VVG+CTEIFNTFMHTE
Sbjct: 61  ICRAAEYKFPDPIPEFAVAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTE 120

Query: 121 YGGPGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 172
           YGGPGTLLVLPFIDMSD INERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDD T
Sbjct: 121 YGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 172

[Close]

BLAST of Chy10G181260 vs. NCBI nr
Match: XP_022997795.1 (protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita maxima] >XP_022997873.1 protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 275 bits (703), Expect = 5.67e-92
Identity = 139/175 (79.43%), Postives = 150/175 (85.71%), Query Frame = 0


Query: 1   MAWTTTSPSFNLLPSLFFPFHKPSLPPSFFSNNPSTPL---RLSPTLTLPSSSSSSFPTH 60
           MAWTT  P+F+LLP LF   HKP+ PP FFSN PS+ L   RLSPTL LP   SSSF   
Sbjct: 1   MAWTTV-PAFHLLPPLF-ALHKPTAPPCFFSN-PSSALQHTRLSPTLRLPFQPSSSFGNQ 60

Query: 61  ICTAAEYKFPDPIPEFAVAETEKFRAHLLQKLAKRDIYGDSLQQVVGICTEIFNTFMHTE 120
           IC AAEYKFPDPIPEFA+AETEKFRAHLL KL+K+DIYGDS+Q+VVG+CTEIFNTFMHTE
Sbjct: 61  ICRAAEYKFPDPIPEFAIAETEKFRAHLLTKLSKKDIYGDSVQEVVGVCTEIFNTFMHTE 120

Query: 121 YGGPGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWTGDDAT 172
           YGGPGTLLVLPFIDMSD INERGLPGGPQAARAAVKWAQ+HVDKDWN WTGDD T
Sbjct: 121 YGGPGTLLVLPFIDMSDTINERGLPGGPQAARAAVKWAQEHVDKDWNLWTGDDGT 172

[Close]

BLAST of Chy10G181260 vs. TAIR 10
Match: AT1G10522.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 199.9 bits (507), Expect = 1.7e-51
Identity = 89/123 (72.36%), Postives = 105/123 (85.37%), Query Frame = 0


Query: 48  SSSSSSFPTHICTAAEYKFPDPIPEFAVAETEKFRAHLLQKLAKRDIYGDSLQQVVGICT 107
           S SS S    +C AAEYKFPDPIPEFA AETEKFR H+L KL+KRD++ DS+ ++VG+CT
Sbjct: 57  SLSSLSRRGFVCRAAEYKFPDPIPEFAEAETEKFRDHMLNKLSKRDLFEDSVDEIVGVCT 116

Query: 108 EIFNTFMHTEYGGPGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWT 167
           EIF TF+ +EYGGPGTLLV+PFIDM+D +NER LPGGPQAARAA+KWAQDHVDKDW +WT
Sbjct: 117 EIFETFLRSEYGGPGTLLVIPFIDMADTLNERELPGGPQAARAAIKWAQDHVDKDWKEWT 176

Query: 168 GDD 171
           G D
Sbjct: 177 GTD 179

[Close]

BLAST of Chy10G181260 vs. TAIR 10
Match: AT1G10522.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 24 Blast hits to 24 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 199.9 bits (507), Expect = 1.7e-51
Identity = 89/123 (72.36%), Postives = 105/123 (85.37%), Query Frame = 0


Query: 48  SSSSSSFPTHICTAAEYKFPDPIPEFAVAETEKFRAHLLQKLAKRDIYGDSLQQVVGICT 107
           S SS S    +C AAEYKFPDPIPEFA AETEKFR H+L KL+KRD++ DS+ ++VG+CT
Sbjct: 57  SLSSLSRRGFVCRAAEYKFPDPIPEFAEAETEKFRDHMLNKLSKRDLFEDSVDEIVGVCT 116

Query: 108 EIFNTFMHTEYGGPGTLLVLPFIDMSDAINERGLPGGPQAARAAVKWAQDHVDKDWNQWT 167
           EIF TF+ +EYGGPGTLLV+PFIDM+D +NER LPGGPQAARAA+KWAQDHVDKDW +WT
Sbjct: 117 EIFETFLRSEYGGPGTLLVIPFIDMADTLNERELPGGPQAARAAIKWAQDHVDKDWKEWT 176

Query: 168 GDD 171
           G D
Sbjct: 177 GTD 179

The following BLAST results are available for this feature:

BLAST of Chy10G181260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XIK0	2.3e-50	72.36	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
B6UFC7	2.8e-35	59.63	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Zea mays OX=4577 GN=PRIN2 ...	[more]
Q6H612	2.4e-34	56.88	Protein PLASTID REDOX INSENSITIVE 2, chloroplastic OS=Oryza sativa subsp. japoni...	[more]

BLAST of Chy10G181260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KTS5	3.4e-92	97.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G603340 PE=4 SV=1	[more]
A0A1S3BEL5	1.6e-86	94.19	uncharacterized protein LOC103489037 OS=Cucumis melo OX=3656 GN=LOC103489037 PE=...	[more]
A0A6J1KAW7	5.6e-71	79.43	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like OS=Cucurbita maxima OX=3...	[more]
A0A6J1GWZ9	2.1e-70	80.11	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like OS=Cucurbita moschata OX...	[more]
A0A6J1DCY7	4.7e-62	74.27	protein PLASTID REDOX INSENSITIVE 2-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]

BLAST of Chy10G181260 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004135224.1	4.54e-120	97.67	protein PLASTID REDOX INSENSITIVE 2, chloroplastic [Cucumis sativus] >KGN51837.1...	[more]
XP_008446250.1	2.82e-112	94.19	PREDICTED: uncharacterized protein LOC103489037 [Cucumis melo]	[more]
XP_038891304.1	3.71e-97	83.89	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Benincasa hispida]	[more]
XP_023549642.1	5.67e-92	80.00	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita pepo subsp. p...	[more]
XP_022997795.1	5.67e-92	79.43	protein PLASTID REDOX INSENSITIVE 2, chloroplastic-like [Cucurbita maxima] >XP_0...	[more]

BLAST of Chy10G181260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G10522.1	1.7e-51	72.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G10522.2	1.7e-51	72.36	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR039349	Protein PLASTID REDOX INSENSITIVE 2	PANTHER	PTHR35987	PROTEIN PLASTID REDOX INSENSITIVE 2, CHLOROPLASTIC-RELATED	coord: 38..170
None	No IPR available	PANTHER	PTHR35987:SF2	PROTEIN PLASTID REDOX INSENSITIVE 2, CHLOROPLASTIC	coord: 38..170

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G181260.1	Chy10G181260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010468	regulation of gene expression
cellular_component	GO:0009536	plastid