Chy10G179370 (gene) Cucumber (hystrix) v1

Overview
NameChy10G179370
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionTranscription termination factor MTERF5
LocationchrH10: 13663347 .. 13664468 (-)
RNA-Seq ExpressionChy10G179370
SyntenyChy10G179370
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTCAAAATTTCCTCCACATTTCTTCTTCATTTCATCAATAAACGTTCTCTCAATACCGTTTCTACTTCTACATTGCCTTTACCCTCTGTTTCTACCATTGAATTCCTCACTAATTCATGTGCCCTTTCTTCAGGTTCTCCTACTTCCGCCGGTCGAAAGCTCCAATTCAATGAAAAAAACATCCAGAAGTACGAAGCCATTATCGGCTTCTTGAAATCTCATGGTTTCGAGAATTCACAGATCGCCAATTTGGTCTCGAGGCAACCGTCAATCCTTCAATCCACAATATCCACCAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTACTTAAGGTAGTTCTATCAAGCCCTGGGATTCTTCTCAGGAGCTTAGATTTTCAGTTGAAACCATCATTTCGTCTCATAAAGGAAATGCTTGAATCGGATGAAAAGGTAACTGTTGCTATTCGTCGTTCTACGTGGCTTCTAACTTCTAATTCCAAGGGTGCTATGCGATCTAACATTGATGTTTTGGTCAGTGAAGGAGTACCTTCTAGGAATATAGCGAAAATGATTGAATTGAGCCCTAGAACTATTACACGAAATGTTGATAGAATGATTGATGCAGTGAGAACGGTTAAAGAATTGGGCGTTGAACCAAAGGATGGTATGTTTGTTTATGCTGTTAAAGCAGTGGTTTCAATGAGTGATTCAGCTTGGAAGAAGAAAATAAATATTATGAAGAGTTTAGGATGGTCTGAGGAGGAGATTTTTACAGCATTTAAGAAATATCCACTTTGTTTAACTTGTTCCGAGAAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGCTGGATCCAGGAACTCTAATTACTTACCCTAAGCTCTTCATTTATTCAGTCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAGAAAAAAAAGATTGCTTTGGTATTTATGGAAGGGGAGAGAAGATTTGTGGAGAAATATGTTATTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCAAGGCAATGTTGCAGCCGAAACCAAATGTGTTGTATAG

mRNA sequence

ATGTTCAAAATTTCCTCCACATTTCTTCTTCATTTCATCAATAAACGTTCTCTCAATACCGTTTCTACTTCTACATTGCCTTTACCCTCTGTTTCTACCATTGAATTCCTCACTAATTCATGTGCCCTTTCTTCAGGTTCTCCTACTTCCGCCGGTCGAAAGCTCCAATTCAATGAAAAAAACATCCAGAAGTACGAAGCCATTATCGGCTTCTTGAAATCTCATGGTTTCGAGAATTCACAGATCGCCAATTTGGTCTCGAGGCAACCGTCAATCCTTCAATCCACAATATCCACCAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTACTTAAGGTAGTTCTATCAAGCCCTGGGATTCTTCTCAGGAGCTTAGATTTTCAGTTGAAACCATCATTTCGTCTCATAAAGGAAATGCTTGAATCGGATGAAAAGGTAACTGTTGCTATTCGTCGTTCTACGTGGCTTCTAACTTCTAATTCCAAGGGTGCTATGCGATCTAACATTGATGTTTTGGTCAGTGAAGGAGTACCTTCTAGGAATATAGCGAAAATGATTGAATTGAGCCCTAGAACTATTACACGAAATGTTGATAGAATGATTGATGCAGTGAGAACGGTTAAAGAATTGGGCGTTGAACCAAAGGATGGTATGTTTGTTTATGCTGTTAAAGCAGTGGTTTCAATGAGTGATTCAGCTTGGAAGAAGAAAATAAATATTATGAAGAGTTTAGGATGGTCTGAGGAGGAGATTTTTACAGCATTTAAGAAATATCCACTTTGTTTAACTTGTTCCGAGAAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGCTGGATCCAGGAACTCTAATTACTTACCCTAAGCTCTTCATTTATTCAGTCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAGAAAAAAAAGATTGCTTTGGTATTTATGGAAGGGGAGAGAAGATTTGTGGAGAAATATGTTATTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCAAGGCAATGTTGCAGCCGAAACCAAATGTGTTGTATAG

Coding sequence (CDS)

ATGTTCAAAATTTCCTCCACATTTCTTCTTCATTTCATCAATAAACGTTCTCTCAATACCGTTTCTACTTCTACATTGCCTTTACCCTCTGTTTCTACCATTGAATTCCTCACTAATTCATGTGCCCTTTCTTCAGGTTCTCCTACTTCCGCCGGTCGAAAGCTCCAATTCAATGAAAAAAACATCCAGAAGTACGAAGCCATTATCGGCTTCTTGAAATCTCATGGTTTCGAGAATTCACAGATCGCCAATTTGGTCTCGAGGCAACCGTCAATCCTTCAATCCACAATATCCACCAATCTGAAGCCTAAATTTGAGTTCCTCCAGGAAATCGGGTTCGTCGGTCCTTTACTACTTAAGGTAGTTCTATCAAGCCCTGGGATTCTTCTCAGGAGCTTAGATTTTCAGTTGAAACCATCATTTCGTCTCATAAAGGAAATGCTTGAATCGGATGAAAAGGTAACTGTTGCTATTCGTCGTTCTACGTGGCTTCTAACTTCTAATTCCAAGGGTGCTATGCGATCTAACATTGATGTTTTGGTCAGTGAAGGAGTACCTTCTAGGAATATAGCGAAAATGATTGAATTGAGCCCTAGAACTATTACACGAAATGTTGATAGAATGATTGATGCAGTGAGAACGGTTAAAGAATTGGGCGTTGAACCAAAGGATGGTATGTTTGTTTATGCTGTTAAAGCAGTGGTTTCAATGAGTGATTCAGCTTGGAAGAAGAAAATAAATATTATGAAGAGTTTAGGATGGTCTGAGGAGGAGATTTTTACAGCATTTAAGAAATATCCACTTTGTTTAACTTGTTCCGAGAAGAAAATGAGGGATGTTGCAGATTTCTGTTTCAACACTGCAAAGCTGGATCCAGGAACTCTAATTACTTACCCTAAGCTCTTCATTTATTCAGTCGAGAAGCGGCTCCAACCGAGGTACAAAGTTCTTGAGGTTTTGAAGGTGAAAAATCTTCTTAAGAAAAAAAAGATTGCTTTGGTATTTATGGAAGGGGAGAGAAGATTTGTGGAGAAATATGTTATTAAGCATTTGGATGAAATCCCAAATCTGATGGACATATACCAAGGCAATGTTGCAGCCGAAACCAAATGTGTTGTATAG

Protein sequence

MFKISSTFLLHFINKRSLNTVSTSTLPLPSVSTIEFLTNSCALSSGSPTSAGRKLQFNEKNIQKYEAIIGFLKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLKVVLSSPGILLRSLDFQLKPSFRLIKEMLESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVLVSEGVPSRNIAKMIELSPRTITRNVDRMIDAVRTVKELGVEPKDGMFVYAVKAVVSMSDSAWKKKINIMKSLGWSEEEIFTAFKKYPLCLTCSEKKMRDVADFCFNTAKLDPGTLITYPKLFIYSVEKRLQPRYKVLEVLKVKNLLKKKKIALVFMEGERRFVEKYVIKHLDEIPNLMDIYQGNVAAETKCVV*
Homology
[Close]
BLAST of Chy10G179370 vs. ExPASy Swiss-Prot
Match: Q9FM80 (Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF9 PE=2 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 6.7e-10
Identity = 58/267 (21.72%), Postives = 113/267 (42.32%), Query Frame = 0 

Query: 61  NIQKYEAIIGFLKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLK 120
           N+   +  + +L S G ++  I  ++ RQP ILQ T+  NLK    FL  +G     + +
Sbjct: 215 NVFSAQERLDYLLSVGVKHRDIKRMLLRQPQILQYTVENNLKAHISFLMGLGIPNSKIGQ 274

Query: 121 VVLSSPGILLRSLDFQLKPSFRLIKEMLESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVL 180
           +V ++P +   S++  L+P+ R + E +                                
Sbjct: 275 IVAATPSLFSYSVENSLRPTIRYLIEEV-------------------------------- 334

Query: 181 VSEGVPSRNIAKMIELSPRTITRNVDRMIDA--VRTVKELGVEPKDGMFVYAVKAVVSMS 240
              G+   ++ K+++LSP+ + + +D   +   +   KELG  P+D +     K    + 
Sbjct: 335 ---GIKETDVGKVVQLSPQILVQRLDITWNTRYMFLSKELGA-PRDSVVKMVKKHPQLLH 394

Query: 241 ---DSAWKKKINIMKSLGWSEEEIFTAFKKYPLCLTCS-EKKMRDVADFCFNTAKLDPGT 300
              D  +  +IN ++S+G    +I          L+ S E  ++    +  N    +   
Sbjct: 395 YSIDDGFLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEDNLKPKYMYLVNELNNEVHI 445

Query: 301 LITYPKLFIYSVEKRLQPRYKVLEVLK 322
           L  YP     S+++R++PR++ L  LK
Sbjct: 455 LTKYPMYLSLSLDQRIRPRHRFLVELK 445

[Close]
BLAST of Chy10G179370 vs. ExPASy Swiss-Prot
Match: F4IHL3 (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.6e-06
Identity = 58/286 (20.28%), Postives = 119/286 (41.61%), Query Frame = 0 

Query: 61  NIQKYEAIIGFLKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLK 120
           + Q  E  I +LK  G    ++  L++ +P ++  +I    KP  ++   +G     + +
Sbjct: 348 SFQVMEKKINYLKEFGLSTEEVGRLLAYKPHLMGCSIEERWKPLVKYFYYLGIPKEGMKR 407

Query: 121 VVLSSPGILLRSLDFQLKPSFRLIKEMLESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVL 180
           +++  P +    L+  + P  R ++EM   +E +   + +   LLT++    +R  +  L
Sbjct: 408 ILVVKPILYCIDLEKTIAPKVRFLQEMGIPNEAIGNMLVKFPSLLTNSLYKKIRPVVIFL 467

Query: 181 VSE-GVPSRNIAKMIELSPRTITRNVDRMIDAVRTVKELGVEPKDGMFVYAVKAVVSMSD 240
           ++  GV  ++I K+I + P  +  ++             G + +  M  Y          
Sbjct: 468 LTRAGVTQKDIGKVIAMDPALLGCSI-------------GTKLEPNMRYYI--------- 527

Query: 241 SAWKKKINIMKSLGWSEEEIFTAFKKYPLCLTCSEKKMRDVADFCFNTAKLDPGTLITYP 300
                      SLG    ++      +P+ L  +   +R    +   T       LI +P
Sbjct: 528 -----------SLGIRFYQLGEMIADFPMLLRYNVDNLRPKYRYLRRTMIRPLQDLIEFP 587

Query: 301 KLFIYSVEKRLQPRYKVLEVLKVKNLLKKKKIALVFMEGERRFVEK 346
           + F YS+E+R+ PR+ ++   +V N   +  +A    E ERR  +K
Sbjct: 588 RFFSYSLERRIIPRHTIMVENRV-NFKLRYMLACTDEEFERRVRDK 599

[Close]
BLAST of Chy10G179370 vs. ExPASy Swiss-Prot
Match: F4JVI3 (Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF5 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 2.6e-06
Identity = 65/300 (21.67%), Postives = 129/300 (43.00%), Query Frame = 0 

Query: 71  FLKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLKVVLSSPGILL 130
           +L   G    QI  +  +  +    ++   +KP  EFL ++G     +  ++   P I  
Sbjct: 202 YLLDLGLNLEQIKTITRKFAAFPYYSLDGKIKPVVEFLLDLGIPKSDIPTILCKRPQICG 261

Query: 131 RSLDFQLKPSFRLIKEMLESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVLVSEGVPSRNI 190
            SL   LKP+   ++ +     +    I R   +LT  S+  + S ++ L   G+    I
Sbjct: 262 ISLTDNLKPTMAFLETLGIDKNQWAKIISRFPAILT-YSRQKLTSTVEFLSQTGLTEEQI 321

Query: 191 AKMIELSPRTITRNV-DRMIDAVRTVKELGVEPKDGMFVYAVKAVVSMS-DSAWKKKINI 250
            +++   P  ++ +V D++   +   + L V+    + ++       +S +S  K     
Sbjct: 322 GRILTRCPNIMSYSVEDKLRPTMEYFRSLNVDV--AVLLHRCPQTFGLSIESNLKPVTEF 381

Query: 251 MKSLGWSEEEIFTAFKKYPLCLTCSEKKMRDVADFCFNTAKLDPGTLITYPKLFIYSVEK 310
               G+  +EI     +Y    T S K+        F T       L+ +P+ F YS+++
Sbjct: 382 FLEKGFGLDEIGIMISRYGALYTFSLKENVMPKWDYFQTMDYPKSELVKFPQFFGYSLQE 441

Query: 311 RLQPRYKVLEVLKVKNLLKKKKIALVFMEGERRFVEKYVIKHLDEIPNLMDIYQGNVAAE 369
           R++PRY++++   V+ LL  + ++L  +E E+      V+K       +M +   NV AE
Sbjct: 442 RIKPRYELVQRSGVR-LLLNQVLSLSGIEFEK------VVK-----KKMMKLVSNNVIAE 486

[Close]
BLAST of Chy10G179370 vs. ExPASy Swiss-Prot
Match: Q84X53 (Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF1 PE=2 SV=2)

HSP 1 Score: 47.4 bits (111), Expect = 4.2e-04
Identity = 38/138 (27.54%), Postives = 64/138 (46.38%), Query Frame = 0 

Query: 72  LKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFL-QEIGFVGPLLLKVVLSSPGILL 131
           L S G     +  ++   P +L S   + + P   FL  EI      + K +   P +L+
Sbjct: 72  LSSTGLSRPAVGRILDMFPDLLTSDPESEILPVLRFLSNEISISEQDIPKSISRCPRLLI 131

Query: 132 RSLDFQLKPSFRLIKEM-LESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVLVSE-GVPSR 191
            S+D+QL+P+   +K +     + +T    R+T LL SN +  +   I+ L    G    
Sbjct: 132 SSVDYQLRPALTFLKTLGFVGRDTIT---SRNTVLLVSNVERTLIPKIEYLEEGLGFTRE 191

Query: 192 NIAKMIELSPRTITRNVD 207
            +AKM+  SP  +T +VD
Sbjct: 192 EVAKMVVRSPALLTYSVD 206

[Close]
BLAST of Chy10G179370 vs. ExPASy TrEMBL
Match: A0A5D3CWN7 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002840 PE=3 SV=1)

HSP 1 Score: 576.2 bits (1484), Expect = 9.6e-161
Identity = 298/374 (79.68%), Postives = 333/374 (89.04%), Query Frame = 0 

Query: 1   MFKISSTFLLHFINKRSLNTVSTSTLPLPSVSTIEFLTNSCALSSGSPTSAGRKLQFNEK 60
           MFKISSTFLLHFI KRS NTVSTSTLPLPSVSTI+FLTNSC L S SPTS GRKLQF+EK
Sbjct: 1   MFKISSTFLLHFIQKRSFNTVSTSTLPLPSVSTIQFLTNSCGLFSASPTSKGRKLQFHEK 60

Query: 61  NIQKYEAIIGFLKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLK 120
           NIQ+YEA+I + KSHGFENS IA LVS+QPSILQS +STNLKPKF+FLQEIG VGPLL K
Sbjct: 61  NIQEYEAVICYFKSHGFENSHIAKLVSKQPSILQSIVSTNLKPKFDFLQEIGIVGPLLPK 120

Query: 121 VVLSSPGILLRSLDFQLKPSFRLIKEMLESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVL 180
           V+LS+PGIL RS++ QLKP+FRLIKEMLESDEKVTVAI R++W+L++NSKG MRSN DVL
Sbjct: 121 VILSNPGILFRSVNSQLKPTFRLIKEMLESDEKVTVAICRASWILSANSKGTMRSNFDVL 180

Query: 181 VSEGVPSRNIAKMIELSPRTITRNVDRMIDAVRTVKELGVEPKDGMFVYAVKAVVSMSDS 240
           VSEGVPS NIAKMI L+PR+I RNV RMI AV+TVKELGVEPKD  FVYAV AV SM+ S
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVGRMIHAVKTVKELGVEPKDRAFVYAVSAVGSMNHS 240

Query: 241 AWKKKINIMKSLGWSEEEIFTAFKKYPLCLTCSEKKMRDVADFCFNTAKLDPGTLITYPK 300
           +WKKKIN+MKSLGWSE+EIFTAFK+YPLCLTCSE+KMRDVADFCFNTAKLDPGTLI+YP 
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 LFIYSVEKRLQPRYKVLEVLKVKNLLKKKKIALV--FMEGERRFVEKYVIKHLDEIPNLM 360
            F  SV+KRL+PRYKVLEVLKVKNLLK KKIAL   FM+GER FV+  V+KHLDEIPNLM
Sbjct: 301 FFNLSVDKRLRPRYKVLEVLKVKNLLKNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLM 360

Query: 361 DIYQGNVAAETKCV 373
           DIY+GN A+ETK V
Sbjct: 361 DIYRGNGASETKSV 374

[Close]
BLAST of Chy10G179370 vs. ExPASy TrEMBL
Match: A0A1S3BEV9 (transcription termination factor MTERF5, chloroplastic-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103488866 PE=3 SV=1)

HSP 1 Score: 568.5 bits (1464), Expect = 2.0e-158
Identity = 290/373 (77.75%), Postives = 328/373 (87.94%), Query Frame = 0 

Query: 1   MFKISSTFLLHFINKRSLNTVSTSTLPLPSVSTIEFLTNSCALSSGSPTSAGRKLQFNEK 60
           MFK SSTFLLHFI KR LNTVSTSTLPL SVSTI+FLTNSC LSSGSP S GRKLQF+E+
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60

Query: 61  NIQKYEAIIGFLKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLK 120
           N+Q+Y A+IGF KSHGFE+SQIA LVSR+PSIL ST+STNLKPKFEFLQEIG VGPLL K
Sbjct: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTK 120

Query: 121 VVLSSPGILLRSLDFQLKPSFRLIKEMLESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVL 180
           ++LS+  IL RSLD QLKP+FRLIKEML SD+KVT AI R++WLLTSNS G +RSNIDVL
Sbjct: 121 LILSNYMILFRSLDSQLKPTFRLIKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180

Query: 181 VSEGVPSRNIAKMIELSPRTITRNVDRMIDAVRTVKELGVEPKDGMFVYAVKAVVSMSDS 240
           VSEGVPS NIA++I L+PR++ R VDRMI AV+TVKELGVEPKDGMFVYAV   VSMSDS
Sbjct: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240

Query: 241 AWKKKINIMKSLGWSEEEIFTAFKKYPLCLTCSEKKMRDVADFCFNTAKLDPGTLITYPK 300
            WKKKIN+MKSLGWSE EIFTAFK++P  LTCSE+KMRD+ADFC NTAKLDPGTLI+YP+
Sbjct: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300

Query: 301 LFIYSVEKRLQPRYKVLEVLKVKNLLKKKKIALVFMEGERRFVEKYVIKHLDEIPNLMDI 360
            F YSV KRLQPRYKVLEVLK+KNLLK K I L+F+EGERRFVEKY++KH D+IPNL+DI
Sbjct: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI 360

Query: 361 YQGNVAAETKCVV 374
           Y GNV AETK V+
Sbjct: 361 YLGNVKAETKSVL 373

[Close]
BLAST of Chy10G179370 vs. ExPASy TrEMBL
Match: A0A5A7SU45 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002650 PE=3 SV=1)

HSP 1 Score: 564.3 bits (1453), Expect = 3.8e-157
Identity = 293/372 (78.76%), Postives = 327/372 (87.90%), Query Frame = 0 

Query: 1   MFKISSTFLLHFINKRSLNTVSTSTLPLPSVSTIEFLTNSCALSSGSPTSAGRKLQFNEK 60
           MFK SSTFLLHFI KR LNTVSTSTLPL SVSTI+FLTNSC LSSGSP S GRKLQF+EK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60

Query: 61  NIQKYEAIIGFLKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLK 120
           NIQ+YEA+IGF KSHGFENSQIA LVSRQPSILQST+ST+LKPKF+FLQEIG VGPLL K
Sbjct: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLPK 120

Query: 121 VVLSSPGILLRSLDFQLKPSFRLIKEMLESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVL 180
           V+LS+PGIL +S++ QLKP+F LIKEMLESDEKV  AI R++W+L++NSKG MRSNIDVL
Sbjct: 121 VILSNPGILFKSVNSQLKPTFCLIKEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180

Query: 181 VSEGVPSRNIAKMIELSPRTITRNVDRMIDAVRTVKELGVEPKDGMFVYAVKAVVSMSDS 240
           VSEGVPS NIAKMI L+PR+I RNVDR+I AV+TVKELGVEPKD  FVYAV AV SMSDS
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240

Query: 241 AWKKKINIMKSLGWSEEEIFTAFKKYPLCLTCSEKKMRDVADFCFNTAKLDPGTLITYPK 300
           +WKKKIN+MKSLGWSE+EIFTAFKK P  LTCSE+KMRDVADFCFNTAKLDP ++I YPK
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300

Query: 301 LFIYSVEKRLQPRYKVLEVLKVKNLLKKKKIALVFMEGERRFVEKYVIKHLDEIPNLMDI 360
            F  SV+KRL+PRYKV EVLKVKNLLK K IA  F+ GER FVE  V+KHLDEIPNLMDI
Sbjct: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 360

Query: 361 YQGNVAAETKCV 373
           Y+GN A+ETK V
Sbjct: 361 YRGNDASETKSV 372

[Close]
BLAST of Chy10G179370 vs. ExPASy TrEMBL
Match: A0A5D3CWA2 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002480 PE=3 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 4.5e-150
Identity = 280/373 (75.07%), Postives = 319/373 (85.52%), Query Frame = 0 

Query: 1   MFKISSTFLLHFINKRSLNTVSTSTLPLPSVSTIEFLTNSCALSSGSPTSAGRKLQFNEK 60
           MFK SSTFLLHFI KR LNTVSTSTLPL SVST+EFLTNSC LSSGSPTS GRKLQF+EK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTVEFLTNSCGLSSGSPTSNGRKLQFDEK 60

Query: 61  NIQKYEAIIGFLKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLK 120
           NIQ+YEA+IGFLKSHG EN QIA LVSR+P ILQS +STNLKPKFEFLQEIGFVGPLL K
Sbjct: 61  NIQQYEAVIGFLKSHGLENPQIAKLVSRKPWILQSKVSTNLKPKFEFLQEIGFVGPLLSK 120

Query: 121 VVLSSPGILLRSLDFQLKPSFRLIKEMLESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVL 180
           ++LS+P I  R+LD QLKPSF  +KE+LESDE+VT AIR S WLL S+ KG ++SNIDVL
Sbjct: 121 LILSNPRIFYRNLDSQLKPSFFFLKEILESDEQVTAAIRHSPWLLISDFKGILKSNIDVL 180

Query: 181 VSEGVPSRNIAKMIELSPRTITRNVDRMIDAVRTVKELGVEPKDGMFVYAVKAVVSMSDS 240
            SEGVPSRNIAK+I  + RTI R VDRMI+ V+TVKELG+EPK GMFV+A++   S+SDS
Sbjct: 181 ASEGVPSRNIAKLIVSNSRTIMRKVDRMIEVVKTVKELGIEPKAGMFVHALRIRCSVSDS 240

Query: 241 AWKKKINIMKSLGWSEEEIFTAFKKYPLCLTCSEKKMRDVADFCFNTAKLDPGTLITYPK 300
            WKKKIN+MKSLGWSE EIFTAFKK P  L CSE+KMRDVADFCFNTAKLDPG++I  PK
Sbjct: 241 TWKKKINVMKSLGWSETEIFTAFKKDPSFLGCSEEKMRDVADFCFNTAKLDPGSVIICPK 300

Query: 301 LFIYSVEKRLQPRYKVLEVLKVKNLLKKKKIALVFMEGERRFVEKYVIKHLDEIPNLMDI 360
           +F  SV+KRLQPRYKVLEVLKVKNLLK   IA V ++ ER FV+K+V++HLDEIPNLMDI
Sbjct: 301 IFKCSVDKRLQPRYKVLEVLKVKNLLKNVNIAWVLVQSERAFVKKFVVRHLDEIPNLMDI 360

Query: 361 YQGNVAAETKCVV 374
           Y+GNV AETK V+
Sbjct: 361 YRGNVTAETKSVL 373

[Close]
BLAST of Chy10G179370 vs. ExPASy TrEMBL
Match: A0A5D3CV46 (Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold35G002910 PE=3 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 4.5e-150
Identity = 281/374 (75.13%), Postives = 318/374 (85.03%), Query Frame = 0 

Query: 1   MFKISSTFLLHFINKRSLNTVSTSTLPLPSVSTIEFLTNSCALSSGSPTSAGRKLQFNEK 60
           M KISS+FLLHF + R LNT+ TSTLPL SVSTI+FLTNSC LSSGSPTSAGRKLQF EK
Sbjct: 1   MSKISSSFLLHFFHNRFLNTIPTSTLPLASVSTIQFLTNSCGLSSGSPTSAGRKLQFGEK 60

Query: 61  NIQKYEAIIGFLKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLK 120
           N Q+Y A+I FLKSHGFENSQIA LVSRQPSILQS +S NLKPKFEFLQEIGFVGPLL K
Sbjct: 61  NTQQYGAVIDFLKSHGFENSQIAKLVSRQPSILQSRVSANLKPKFEFLQEIGFVGPLLPK 120

Query: 121 VVLSSPGILLRSLDFQLKPSFRLIKEMLESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVL 180
           +++SSP IL +SLD +LKPSFRL+KEML SDE+VT AI R++WLLT + KG ++SN DVL
Sbjct: 121 LIVSSPSILNKSLDSKLKPSFRLLKEMLGSDERVTAAICRASWLLTYDFKGVIKSNFDVL 180

Query: 181 VSEGVPSRNIAKMIELSPRTITRNVDRMIDAVRTVKELGVEPKDGMFVYAVKAVVSMSDS 240
           VSEGVPSRNIAKMI  +PRTI + VD+MI  V+ VKELG+EPK GMF  AV   + MSDS
Sbjct: 181 VSEGVPSRNIAKMIAWNPRTIMQRVDKMIQVVKNVKELGIEPKAGMFFQAVLVRLQMSDS 240

Query: 241 AWKKKINIMKSLGWSEEEIFTAFKKYPLCLTCSEKKMRDVADFCFNTAKLDPGTLITYPK 300
            WKKKIN+MKSLGWSE+EI TAFK+YPLCLTCSE+KMRDVADFCFNTAKLDPGTLI+ P 
Sbjct: 241 TWKKKINVMKSLGWSEKEILTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISNPV 300

Query: 301 LFIYSVEKRLQPRYKVLEVLKVKNLLKKKKIALV--FMEGERRFVEKYVIKHLDEIPNLM 360
            F  SV KRL+PRYKVLEVLKVKNLL+ KKIAL   FM+GER FVE  V+KHLDEIPNLM
Sbjct: 301 FFKLSVNKRLRPRYKVLEVLKVKNLLRNKKIALAWWFMQGEREFVENNVVKHLDEIPNLM 360

Query: 361 DIYQGNVAAETKCV 373
           DIY+GN A+ET+ V
Sbjct: 361 DIYRGNDASETQSV 374

[Close]
BLAST of Chy10G179370 vs. NCBI nr
Match: KAE8648669.1 (hypothetical protein Csa_007829 [Cucumis sativus])

HSP 1 Score: 587 bits (1512), Expect = 1.33e-208
Identity = 303/373 (81.23%), Postives = 336/373 (90.08%), Query Frame = 0 

Query: 1   MFKISSTFLLHFINKRSLNTVSTSTLPLPSVSTIEFLTNSCALSSGSPTSAGRKLQFNEK 60
           MFKISSTFLLHFI+KRSLN++STSTLP PSVSTI+FLTNSC LSSGSPTS GRKL+F+EK
Sbjct: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK 60

Query: 61  NIQKYEAIIGFLKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLK 120
           +IQ+YEAIIGFLKSHGFENSQIA LVSRQPSILQS +S NLKPKFEFLQE G VG LL K
Sbjct: 61  HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK 120

Query: 121 VVLSSPGILLRSLDFQLKPSFRLIKEMLESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVL 180
           V+LSSPGILLRSLD QLKPSFRLIKEMLE+DE VT AI R TWLLT +SKG +RSNID+L
Sbjct: 121 VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL 180

Query: 181 VSEGVPSRNIAKMIELSPRTITRNVDRMIDAVRTVKELGVEPKDGMFVYAVKAVVSMSDS 240
           VSEGVPSRNIAKMIEL+PRTI +NVDR+IDAV+TVKELGVEPKD  FV+AV  V+SMSDS
Sbjct: 181 VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKTVKELGVEPKDFKFVHAVTTVLSMSDS 240

Query: 241 AWKKKINIMKSLGWSEEEIFTAFKKYPLCLTCSEKKMRDVADFCFNTAKLDPGTLITYPK 300
           AWKKKIN+MKSLGWSE+EI TAFK+YP  LTCSE+KMRDVADFCFNTAKLDPGTLI YP 
Sbjct: 241 AWKKKINVMKSLGWSEKEILTAFKRYPPYLTCSEEKMRDVADFCFNTAKLDPGTLIRYPV 300

Query: 301 LFIYSVEKRLQPRYKVLEVLKVKNLLKKKKIALVFMEGERRFVEKYVIKHLDEIPNLMDI 360
           LF YSV+KRL+PRYKVLEVLKVKNLLK +K   +F  GER FVE Y++KHLDEIPNLMDI
Sbjct: 301 LFKYSVDKRLRPRYKVLEVLKVKNLLKNEKSVQLFFRGERDFVENYIVKHLDEIPNLMDI 360

Query: 361 YQGNVAAETKCVV 373
           Y+GNVA+ETK V+
Sbjct: 361 YRGNVASETKSVL 373

[Close]
BLAST of Chy10G179370 vs. NCBI nr
Match: KAE8648655.1 (hypothetical protein Csa_008541 [Cucumis sativus])

HSP 1 Score: 584 bits (1505), Expect = 1.55e-207
Identity = 302/373 (80.97%), Postives = 335/373 (89.81%), Query Frame = 0 

Query: 1   MFKISSTFLLHFINKRSLNTVSTSTLPLPSVSTIEFLTNSCALSSGSPTSAGRKLQFNEK 60
           MFKISSTFLLHFI+KRSLN++STSTLP PSVSTI+FLTNSC LSSGSPTS GRKL+F+EK
Sbjct: 1   MFKISSTFLLHFIHKRSLNSISTSTLPSPSVSTIQFLTNSCGLSSGSPTSNGRKLRFDEK 60

Query: 61  NIQKYEAIIGFLKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLK 120
           +IQ+YEAIIGFLKSHGFENSQIA LVSRQPSILQS +S NLKPKFEFLQE G VG LL K
Sbjct: 61  HIQQYEAIIGFLKSHGFENSQIAKLVSRQPSILQSKVSDNLKPKFEFLQENGIVGSLLPK 120

Query: 121 VVLSSPGILLRSLDFQLKPSFRLIKEMLESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVL 180
           V+LSSPGILLRSLD QLKPSFRLIKEMLE+DE VT AI R TWLLT +SKG +RSNID+L
Sbjct: 121 VILSSPGILLRSLDSQLKPSFRLIKEMLETDENVTAAICRYTWLLTYSSKGTLRSNIDIL 180

Query: 181 VSEGVPSRNIAKMIELSPRTITRNVDRMIDAVRTVKELGVEPKDGMFVYAVKAVVSMSDS 240
           VSEGVPSRNIAKMIEL+PRTI +NVDR+IDAV+ VKELGVEPKD  FV+AV  V+SMSDS
Sbjct: 181 VSEGVPSRNIAKMIELNPRTIVQNVDRIIDAVKRVKELGVEPKDFKFVHAVTTVLSMSDS 240

Query: 241 AWKKKINIMKSLGWSEEEIFTAFKKYPLCLTCSEKKMRDVADFCFNTAKLDPGTLITYPK 300
            WKKKIN+MKSLGWSE EIFTAFKK+P  LTCSE K+R+VADFCFNTAKLDPGTLI+YP 
Sbjct: 241 NWKKKINVMKSLGWSENEIFTAFKKFPPYLTCSEDKLRNVADFCFNTAKLDPGTLISYPV 300

Query: 301 LFIYSVEKRLQPRYKVLEVLKVKNLLKKKKIALVFMEGERRFVEKYVIKHLDEIPNLMDI 360
           LF YSVEKRL+PRYKVLEVLKVKNLLK +K A +F  GER FVE Y++KHLDEIPNLMDI
Sbjct: 301 LFKYSVEKRLRPRYKVLEVLKVKNLLKNEKSAQLFFRGEREFVENYIVKHLDEIPNLMDI 360

Query: 361 YQGNVAAETKCVV 373
           Y+GNVA+ETK V+
Sbjct: 361 YRGNVASETKSVL 373

[Close]
BLAST of Chy10G179370 vs. NCBI nr
Match: KAA0034139.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15780.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 576 bits (1484), Expect = 2.62e-204
Identity = 298/374 (79.68%), Postives = 333/374 (89.04%), Query Frame = 0 

Query: 1   MFKISSTFLLHFINKRSLNTVSTSTLPLPSVSTIEFLTNSCALSSGSPTSAGRKLQFNEK 60
           MFKISSTFLLHFI KRS NTVSTSTLPLPSVSTI+FLTNSC L S SPTS GRKLQF+EK
Sbjct: 1   MFKISSTFLLHFIQKRSFNTVSTSTLPLPSVSTIQFLTNSCGLFSASPTSKGRKLQFHEK 60

Query: 61  NIQKYEAIIGFLKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLK 120
           NIQ+YEA+I + KSHGFENS IA LVS+QPSILQS +STNLKPKF+FLQEIG VGPLL K
Sbjct: 61  NIQEYEAVICYFKSHGFENSHIAKLVSKQPSILQSIVSTNLKPKFDFLQEIGIVGPLLPK 120

Query: 121 VVLSSPGILLRSLDFQLKPSFRLIKEMLESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVL 180
           V+LS+PGIL RS++ QLKP+FRLIKEMLESDEKVTVAI R++W+L++NSKG MRSN DVL
Sbjct: 121 VILSNPGILFRSVNSQLKPTFRLIKEMLESDEKVTVAICRASWILSANSKGTMRSNFDVL 180

Query: 181 VSEGVPSRNIAKMIELSPRTITRNVDRMIDAVRTVKELGVEPKDGMFVYAVKAVVSMSDS 240
           VSEGVPS NIAKMI L+PR+I RNV RMI AV+TVKELGVEPKD  FVYAV AV SM+ S
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVGRMIHAVKTVKELGVEPKDRAFVYAVSAVGSMNHS 240

Query: 241 AWKKKINIMKSLGWSEEEIFTAFKKYPLCLTCSEKKMRDVADFCFNTAKLDPGTLITYPK 300
           +WKKKIN+MKSLGWSE+EIFTAFK+YPLCLTCSE+KMRDVADFCFNTAKLDPGTLI+YP 
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKRYPLCLTCSEEKMRDVADFCFNTAKLDPGTLISYPV 300

Query: 301 LFIYSVEKRLQPRYKVLEVLKVKNLLKKKKIALV--FMEGERRFVEKYVIKHLDEIPNLM 360
            F  SV+KRL+PRYKVLEVLKVKNLLK KKIAL   FM+GER FV+  V+KHLDEIPNLM
Sbjct: 301 FFNLSVDKRLRPRYKVLEVLKVKNLLKNKKIALTGWFMQGEREFVKNNVVKHLDEIPNLM 360

Query: 361 DIYQGNVAAETKCV 372
           DIY+GN A+ETK V
Sbjct: 361 DIYRGNGASETKSV 374

[Close]
BLAST of Chy10G179370 vs. NCBI nr
Match: XP_008446012.1 (PREDICTED: transcription termination factor MTERF5, chloroplastic-like isoform X1 [Cucumis melo])

HSP 1 Score: 568 bits (1465), Expect = 1.90e-201
Identity = 290/373 (77.75%), Postives = 328/373 (87.94%), Query Frame = 0 

Query: 1   MFKISSTFLLHFINKRSLNTVSTSTLPLPSVSTIEFLTNSCALSSGSPTSAGRKLQFNEK 60
           MFK SSTFLLHFI KR LNTVSTSTLPL SVSTI+FLTNSC LSSGSP S GRKLQF+E+
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEE 60

Query: 61  NIQKYEAIIGFLKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLK 120
           N+Q+Y A+IGF KSHGFE+SQIA LVSR+PSIL ST+STNLKPKFEFLQEIG VGPLL K
Sbjct: 61  NLQQYGAVIGFFKSHGFEDSQIAKLVSRKPSILHSTVSTNLKPKFEFLQEIGIVGPLLTK 120

Query: 121 VVLSSPGILLRSLDFQLKPSFRLIKEMLESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVL 180
           ++LS+  IL RSLD QLKP+FRLIKEML SD+KVT AI R++WLLTSNS G +RSNIDVL
Sbjct: 121 LILSNYMILFRSLDSQLKPTFRLIKEMLGSDKKVTAAICRTSWLLTSNSNGTVRSNIDVL 180

Query: 181 VSEGVPSRNIAKMIELSPRTITRNVDRMIDAVRTVKELGVEPKDGMFVYAVKAVVSMSDS 240
           VSEGVPS NIA++I L+PR++ R VDRMI AV+TVKELGVEPKDGMFVYAV   VSMSDS
Sbjct: 181 VSEGVPSTNIAQIIALNPRSVMRKVDRMIRAVKTVKELGVEPKDGMFVYAVSVAVSMSDS 240

Query: 241 AWKKKINIMKSLGWSEEEIFTAFKKYPLCLTCSEKKMRDVADFCFNTAKLDPGTLITYPK 300
            WKKKIN+MKSLGWSE EIFTAFK++P  LTCSE+KMRD+ADFC NTAKLDPGTLI+YP+
Sbjct: 241 TWKKKINVMKSLGWSENEIFTAFKRFPRFLTCSEEKMRDIADFCLNTAKLDPGTLISYPQ 300

Query: 301 LFIYSVEKRLQPRYKVLEVLKVKNLLKKKKIALVFMEGERRFVEKYVIKHLDEIPNLMDI 360
            F YSV KRLQPRYKVLEVLK+KNLLK K I L+F+EGERRFVEKY++KH D+IPNL+DI
Sbjct: 301 FFNYSVHKRLQPRYKVLEVLKMKNLLKTKNIGLLFVEGERRFVEKYIVKHFDKIPNLIDI 360

Query: 361 YQGNVAAETKCVV 373
           Y GNV AETK V+
Sbjct: 361 YLGNVKAETKSVL 373

[Close]
BLAST of Chy10G179370 vs. NCBI nr
Match: KAA0034158.1 (transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15761.1 transcription termination factor MTERF5 [Cucumis melo var. makuwa])

HSP 1 Score: 564 bits (1453), Expect = 1.27e-199
Identity = 293/372 (78.76%), Postives = 327/372 (87.90%), Query Frame = 0 

Query: 1   MFKISSTFLLHFINKRSLNTVSTSTLPLPSVSTIEFLTNSCALSSGSPTSAGRKLQFNEK 60
           MFK SSTFLLHFI KR LNTVSTSTLPL SVSTI+FLTNSC LSSGSP S GRKLQF+EK
Sbjct: 1   MFKFSSTFLLHFIQKRFLNTVSTSTLPLASVSTIQFLTNSCGLSSGSPISRGRKLQFDEK 60

Query: 61  NIQKYEAIIGFLKSHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLK 120
           NIQ+YEA+IGF KSHGFENSQIA LVSRQPSILQST+ST+LKPKF+FLQEIG VGPLL K
Sbjct: 61  NIQQYEAVIGFFKSHGFENSQIAKLVSRQPSILQSTVSTDLKPKFDFLQEIGIVGPLLPK 120

Query: 121 VVLSSPGILLRSLDFQLKPSFRLIKEMLESDEKVTVAIRRSTWLLTSNSKGAMRSNIDVL 180
           V+LS+PGIL +S++ QLKP+F LIKEMLESDEKV  AI R++W+L++NSKG MRSNIDVL
Sbjct: 121 VILSNPGILFKSVNSQLKPTFCLIKEMLESDEKVAAAICRASWILSANSKGTMRSNIDVL 180

Query: 181 VSEGVPSRNIAKMIELSPRTITRNVDRMIDAVRTVKELGVEPKDGMFVYAVKAVVSMSDS 240
           VSEGVPS NIAKMI L+PR+I RNVDR+I AV+TVKELGVEPKD  FVYAV AV SMSDS
Sbjct: 181 VSEGVPSTNIAKMIALNPRSIMRNVDRIIHAVKTVKELGVEPKDRTFVYAVSAVGSMSDS 240

Query: 241 AWKKKINIMKSLGWSEEEIFTAFKKYPLCLTCSEKKMRDVADFCFNTAKLDPGTLITYPK 300
           +WKKKIN+MKSLGWSE+EIFTAFKK P  LTCSE+KMRDVADFCFNTAKLDP ++I YPK
Sbjct: 241 SWKKKINVMKSLGWSEKEIFTAFKKDPTFLTCSEEKMRDVADFCFNTAKLDPESVIIYPK 300

Query: 301 LFIYSVEKRLQPRYKVLEVLKVKNLLKKKKIALVFMEGERRFVEKYVIKHLDEIPNLMDI 360
            F  SV+KRL+PRYKV EVLKVKNLLK K IA  F+ GER FVE  V+KHLDEIPNLMDI
Sbjct: 301 FFQCSVDKRLKPRYKVFEVLKVKNLLKNKNIARWFIRGEREFVENNVVKHLDEIPNLMDI 360

Query: 361 YQGNVAAETKCV 372
           Y+GN A+ETK V
Sbjct: 361 YRGNDASETKSV 372

[Close]
BLAST of Chy10G179370 vs. TAIR 10
Match: AT5G07900.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 195.3 bits (495), Expect = 8.9e-50
Identity = 110/333 (33.03%), Postives = 183/333 (54.95%), Query Frame = 0 

Query: 33  TIEFLTNSCALSSGSPTSAGRKLQFNEKNIQKYEAIIGFLKSHGFENSQIANLVSRQPSI 92
           T+ +L +SC LS  S T A RKL  +    ++   ++  L+ HGF  +QI++LV ++P +
Sbjct: 71  TLNYLIDSCGLSPDSATVASRKLLLDSP--ERPNTVLNLLRDHGFTTAQISSLVKKRPVL 130

Query: 93  LQSTISTNLKPKFEFLQEIGFVGPLLLKVVLSSPGILLRSLDFQLKPSFRLIKEMLESDE 152
           L +   + L PK  F   IG    LL + + S P IL RSL  QL PS+  +K +L+SDE
Sbjct: 131 LLANAESVLLPKLSFFLSIGVSKSLLARTLASDPTILTRSLVNQLIPSYNFLKSVLDSDE 190

Query: 153 KVTVAIRRSTWLLTSNSKGAMRSNIDVLVSEGVPSRNIAKMIELSPRTITRNVDRMIDAV 212
           K+  A+RR+TW+   +    +  NI+ +   GVP + I  ++   P  + +         
Sbjct: 191 KIVAALRRTTWVFLEDHTKNLVPNINYMAETGVPEKCIKLLLTHFPEAVMQKNHEFQAIA 250

Query: 213 RTVKELGVEPKDGMFVYAVKAVVSMSD-SAWKKKINIMKSLGWSEEEIFTAFKKYPLCLT 272
           +  +E+G  P+   FV A+ A+    + S W K   + +  GWSE++I  AFKK+P C+ 
Sbjct: 251 KQAQEMGFNPQKSTFVLAIHALSGKGNKSIWDKCFEVYQRWGWSEDDIMCAFKKHPHCMM 310

Query: 273 CSEKKMRDVADFCFNTAKLDPGTLITYPKLFIYSVEKRLQPRYKVLEVLKVKNLLKKK-K 332
            SE+K+    ++  N   + P ++   P +  +S+EKR+ PR  V +VL    L+K+   
Sbjct: 311 LSERKINRTMEYFVNEMNMAPRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKEDWS 370

Query: 333 IALVFMEGERRFVEKYVIKHLDEIPNLMDIYQG 364
           +  + +  E+ F+EK VIK+ +E+P LM++Y G
Sbjct: 371 LTSLLVPVEKVFLEKLVIKYEEELPELMNLYLG 401

[Close]
BLAST of Chy10G179370 vs. TAIR 10
Match: AT1G21150.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 157.5 bits (397), Expect = 2.0e-38
Identity = 94/334 (28.14%), Postives = 170/334 (50.90%), Query Frame = 0 

Query: 33  TIEFLTNSCALSSGSPTSAGRKLQFNEKNIQKYEAIIGFLKSHGFENSQIANLVSRQPSI 92
           T+ +L +SC LS  S  S  R ++    + +K ++++   K HGF N QI +++   P +
Sbjct: 58  TVSYLVDSCGLSLESAKSNSRFVKL--VSSKKPDSVLALFKDHGFTNDQITSVIKSFPRV 117

Query: 93  LQSTISTNLKPKFEFLQEIGFVGPLLLKVVLSSPGILLRSLDFQLKPSFRLIKEMLESDE 152
           L  +    + PK  F   IGF      K++ SSP +L  SL  +L P +  +K +L  +E
Sbjct: 118 LSLSPEDVISPKLMFFSSIGFSTSDTAKMISSSPKMLSYSLHKRLIPCYDSLKSILVEEE 177

Query: 153 KVTVAIRRSTWLLTSNSKGAMRSNIDVLVSEGVPSRNIAKMIELSPRTITRNVDRMIDAV 212
            V   ++R     +      +   + +    GVP ++I  +++ SP T      R  + +
Sbjct: 178 SVVKCLKRGIRCFSLKITHCVSLRVSICRELGVPDKSIKWLVQASPFTFFSRERRFNEVL 237

Query: 213 RTVKELGVEPKDGMFVYAVKAVVSMSDSAWKKKINIMKSLGWSEEEIFTAFKKYPLCLTC 272
             V   G +PK   FV+A+ A    S+SA ++K  + +  GWS+E+   A  ++P C+T 
Sbjct: 238 NRVCSYGFDPKKAGFVHAMVAFDCTSESAMERKFKLFQCFGWSKEDFVAAIMRFPNCVTV 297

Query: 273 SEKKMRDVADFCFNTAKLDPGTLITYPKLFIYSVEKRLQPRYKVLEVLKVKNLLKKKKI- 332
           S++K+    ++  N   L    ++  P +   S+EKR++PR +V+ +L  K L+KK+ I 
Sbjct: 298 SDEKIMYTLEYLVNNIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDIN 357

Query: 333 -ALVFMEGERRFVEKYVIKHLDEIPNLMDIYQGN 365
              +       F++K+V+K+ DE+P L+  +  N
Sbjct: 358 YFTILKLKSSEFMDKFVLKYQDEMPQLVQPFTSN 389

[Close]
BLAST of Chy10G179370 vs. TAIR 10
Match: AT5G64950.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 129.0 bits (323), Expect = 7.8e-30
Identity = 97/348 (27.87%), Postives = 178/348 (51.15%), Query Frame = 0 

Query: 17  SLNTVSTSTLP--LPSVSTIEFLTNSCALSSGSPTSAGRKLQF-NEKNIQKYEAIIGFLK 76
           SL+  S++  P  + + + +EFL ++       P +    +++ N K++++  ++I  LK
Sbjct: 23  SLHHFSSNATPASISNPAFVEFLRDN---GFQKPLAIAIAMRYPNLKSLEQPRSVIQMLK 82

Query: 77  SHGFENSQIANLVSRQPSILQSTISTNLKPKFEFLQEIGFVGPLLLKVVLSSPGILLRSL 136
           S+ F ++QI   +   P ++   +   L+PK  F ++IGF G  L K V  +  ++  SL
Sbjct: 83  SYSFSDTQIQKSIRVHPRMMFYNVEKILEPKLRFFKDIGFTGSGLGKFVSQNSSVVGVSL 142

Query: 137 DFQLKPSFRLIKEML-ESDEKVTVAIRRSTWLLTSNSKGA-MRSNIDVLVSEGVPSRNIA 196
             +L P+  ++K ++    E + V + R  WLL S      +  NI  L + G+    +A
Sbjct: 143 VKKLIPTVEILKSIVAPKHEDLPVILSRCGWLLLSRDPNLFLLPNISYLETCGIVGSQLA 202

Query: 197 KMIELSPRTITRNVDRMIDAVRTVKELGVEPKDGMFVYAVKAVVSMSDSAWKKKINIMKS 256
            ++   PR    + +++   V    +LG      M V+AV ++ S+S+  + +K+ +  +
Sbjct: 203 SLLRRQPRIFNLSEEKLRGYVSRALDLGFTLNSRMLVHAVISLSSLSEKTFDRKVKLFMA 262

Query: 257 LGWSEEEIFTAFKKYPLCLTCSEKKMRDVADFCFNTAKLDPGTLITYPKLFIYSVEKRLQ 316
            G+SE+EI    ++ P  + CSE K+    +F      L+   L   P +  Y++EKR+ 
Sbjct: 263 NGFSEDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGLEREALAKRPCVLSYNLEKRVI 322

Query: 317 PRYKVLEVLKVKNLL-----KKKKIALVFMEGERRFVEKYVIKHLDEI 355
           PR KVL++L+ K LL     KKK +  +    E  F+EKYV++  DEI
Sbjct: 323 PRLKVLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEI 367

[Close]
BLAST of Chy10G179370 vs. TAIR 10
Match: AT1G61970.1 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 123.6 bits (309), Expect = 3.3e-28
Identity = 95/371 (25.61%), Postives = 177/371 (47.71%), Query Frame = 0 

Query: 33  TIEFLTNSCALSSGSPTSAGRKLQFNEKNIQKYEAIIGFLKSHGFENSQIANLVSRQPSI 92
           T+ +L +S  L++    S  RK+ F +KN    ++++  L SHGF  SQI+ ++   P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSTISTNLKPKFEFLQEIGFVGPLLLKVVLSSPGILLRSLDFQLKPSFRLIKEMLESDE 152
           L +    +L PK +FLQ  G     + ++V S P IL +     +   +  IK+ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 KVTVAIRRSTWLLTSNSKGAMRSNIDVLVSEGVPSRNIAKMIELSPRTITRNVDRMIDAV 212
                +  S  L   N +  +R N+ VL   G+P + +  ++ +S        ++  + +
Sbjct: 174 SKNEKLCHS--LPQGNLENKIR-NVSVLRELGMPHKLLFSLL-ISDSQPVCGKEKFEETL 233

Query: 213 RTVKELGVEPKDGMFVYAVKAVVSMSDSAWKKKINIMKSLGWSEEEIFTAFKKYPLCLTC 272
           + V E+G +P    FV A++ +  M++   ++K+++ KSLG+   +++++FKK+P+ L  
Sbjct: 234 KKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRV 293

Query: 273 SEKKMRD-----------------------------------VADFCFNTAKLDPGTLIT 332
           SEKKM D                                     +F           +++
Sbjct: 294 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVS 353

Query: 333 YPKLFIYSVEKRLQPRYKVLEVLKVKNLLKKK--KIALVFMEGERRFVEKYVIKHLDE-- 365
            P +F YS+EKR+ PR  V++ L  K L++ +   I+ V M  ++ F+ +YV  H+D+  
Sbjct: 354 NPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQL 413

[Close]
BLAST of Chy10G179370 vs. TAIR 10
Match: AT1G61970.2 (Mitochondrial transcription termination factor family protein )

HSP 1 Score: 123.6 bits (309), Expect = 3.3e-28
Identity = 95/371 (25.61%), Postives = 177/371 (47.71%), Query Frame = 0 

Query: 33  TIEFLTNSCALSSGSPTSAGRKLQFNEKNIQKYEAIIGFLKSHGFENSQIANLVSRQPSI 92
           T+ +L +S  L++    S  RK+ F +KN    ++++  L SHGF  SQI+ ++   P +
Sbjct: 54  TVSYLVDSLGLTTKLAESISRKVSFEDKN--NPDSVLNLLTSHGFTGSQISTIIRDYPQL 113

Query: 93  LQSTISTNLKPKFEFLQEIGFVGPLLLKVVLSSPGILLRSLDFQLKPSFRLIKEMLESDE 152
           L +    +L PK +FLQ  G     + ++V S P IL +     +   +  IK+ L    
Sbjct: 114 LIADAEKSLGPKLQFLQSRGASSSEITEIVSSVPEILGKKGHKTISVYYDFIKDTLLEKS 173

Query: 153 KVTVAIRRSTWLLTSNSKGAMRSNIDVLVSEGVPSRNIAKMIELSPRTITRNVDRMIDAV 212
                +  S  L   N +  +R N+ VL   G+P + +  ++ +S        ++  + +
Sbjct: 174 SKNEKLCHS--LPQGNLENKIR-NVSVLRELGMPHKLLFSLL-ISDSQPVCGKEKFEETL 233

Query: 213 RTVKELGVEPKDGMFVYAVKAVVSMSDSAWKKKINIMKSLGWSEEEIFTAFKKYPLCLTC 272
           + V E+G +P    FV A++ +  M++   ++K+++ KSLG+   +++++FKK+P+ L  
Sbjct: 234 KKVVEMGFDPTTSKFVEALQVIYKMNEKTIEEKVHLYKSLGFDVGDVWSSFKKWPISLRV 293

Query: 273 SEKKMRD-----------------------------------VADFCFNTAKLDPGTLIT 332
           SEKKM D                                     +F           +++
Sbjct: 294 SEKKMLDSIETFLGLGFSRDEFAKMVKHFPPCIGLSTETVKKKTEFLVKKMNWPLKAVVS 353

Query: 333 YPKLFIYSVEKRLQPRYKVLEVLKVKNLLKKK--KIALVFMEGERRFVEKYVIKHLDE-- 365
            P +F YS+EKR+ PR  V++ L  K L++ +   I+ V M  ++ F+ +YV  H+D+  
Sbjct: 354 NPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCTKQVFLNRYVANHVDKQL 413

The following BLAST results are available for this feature:
BLAST of Chy10G179370 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9FM806.7e-1021.72Transcription termination factor MTERF9, chloroplastic OS=Arabidopsis thaliana O... [more]
F4IHL32.6e-0620.28Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
F4JVI32.6e-0621.67Transcription termination factor MTERF5, chloroplastic OS=Arabidopsis thaliana O... [more]
Q84X534.2e-0427.54Transcription termination factor MTEF1, chloroplastic OS=Arabidopsis thaliana OX... [more]
BLAST of Chy10G179370 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3CWN79.6e-16179.68Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A1S3BEV92.0e-15877.75transcription termination factor MTERF5, chloroplastic-like isoform X1 OS=Cucumi... [more]
A0A5A7SU453.8e-15778.76Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3CWA24.5e-15075.07Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
A0A5D3CV464.5e-15075.13Transcription termination factor MTERF5 OS=Cucumis melo var. makuwa OX=1194695 G... [more]
BLAST of Chy10G179370 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8648669.11.33e-20881.23hypothetical protein Csa_007829 [Cucumis sativus][more]
KAE8648655.11.55e-20780.97hypothetical protein Csa_008541 [Cucumis sativus][more]
KAA0034139.12.62e-20479.68transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15780.1 t... [more]
XP_008446012.11.90e-20177.75PREDICTED: transcription termination factor MTERF5, chloroplastic-like isoform X... [more]
KAA0034158.11.27e-19978.76transcription termination factor MTERF5 [Cucumis melo var. makuwa] >TYK15761.1 t... [more]
BLAST of Chy10G179370 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G07900.18.9e-5033.03Mitochondrial transcription termination factor family protein [more]
AT1G21150.12.0e-3828.14Mitochondrial transcription termination factor family protein [more]
AT5G64950.17.8e-3027.87Mitochondrial transcription termination factor family protein [more]
AT1G61970.13.3e-2825.61Mitochondrial transcription termination factor family protein [more]
AT1G61970.23.3e-2825.61Mitochondrial transcription termination factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 293..323
e-value: 0.052
score: 22.7
coord: 83..114
e-value: 0.0018
score: 27.5
coord: 119..150
e-value: 210.0
score: 9.1
coord: 260..291
e-value: 170.0
score: 9.9
coord: 191..221
e-value: 72.0
score: 12.2
coord: 155..186
e-value: 1000.0
score: 3.8
coord: 225..255
e-value: 290.0
score: 8.0
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 70..222
e-value: 3.6E-20
score: 72.1
coord: 198..333
e-value: 1.2E-17
score: 63.8
IPR003690Transcription termination factor, mitochondrial/chloroplasticPANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 17..365
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3D1.25.70.10Transcription termination factor 3, mitochondrialcoord: 136..356
e-value: 3.9E-41
score: 142.9
NoneNo IPR availablePANTHERPTHR13068:SF31TRANSCRIPTION TERMINATION FACTOR MTERF15, MITOCHONDRIAL-LIKEcoord: 17..365

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy10G179370.1Chy10G179370.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006353 DNA-templated transcription, termination
biological_process GO:0006355 regulation of transcription, DNA-templated
molecular_function GO:0003690 double-stranded DNA binding