Chy10G178830 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G178830
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Gag-Pol polyprotein/retrotransposon
Location	chrH10: 13282684 .. 13286874 (+)
RNA-Seq Expression	Chy10G178830
Synteny	Chy10G178830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATATCCCTTGCGTCGTTTTCCCGGTACCGCCATATAAGCTTCTCTCGAGTTTCAAAATTCTGCAACATATTACATTCCGAATGCTTATCCGTTTTTTATTCTTCAGGATTCGATCGAATTGCAGTCGAAGTCAACTTCCAGAGCTTCCCCGCCATTTCGCGCCCCTCCAGAGCCGAATAAGATTTTCTGTTAGTCGGAACCCTAGCGTCCGATTCTGCCTCATCAATGCCAAAATTAGCGTAAGTGTTCCTCAGTGAAATGGCATAACAGTAACTGCAGTTTAATGCTTTCATGCTATAGTGTTTAATCCACTTGCTTCAGAATCTAGTGCCCTAGTTTTGTCATTGTTGGTTATTTGTATTTCATCTGGTCTCATCGGTATTTTCGTTTGAATTGTGTTACTATTTCTTATATACTTCAGAATTGAACTTCTATATTACATACATGGTTGACCAGCTCTGTATTTTGAACATTACCAGCAAAGGAAAACAAAGGGAGGCATTTTGTACTATTTTAATTTGTTGTTGGACACTTAGAAAAATAATAACAAATGAGAGGGAGACACAGAGAAAGAGATTTGGTTCTTAGCAGAGTAGGAGAAGAGAAGAGGTGGTTTTTGATGCATTTGGCTGGTTGTAGACATTGGAAGTCTGTTTCTATGAAGTTATTTTGGTTGTTTAAGTGTTCGTTTGCTTTCTATTGACTTCAGTTGTTTATATGAATAGAACGTGGGCAGTAAATGAAATTTTAGGCACGAATGTTCTTGTATTTGGACAAGCGTATGTGTTCCTGATTAGACACTACTGTTGCATTGTCATAGGCCAACGATCCATTGAAATCTGAGGATGACTTTTCCAATCATGAAATGGAAGGTATGCCATAAAAAATTTAACCTATGAATATGTGGTTGAGTTTTGATGAATTCTTATCTGCTGATTTATTGATCAAGAACTTGAGAATTCTTATCTGCTGATTTCTTGCCTTGTCACTACTTTTGGAGTTTGTATCCTTGAGCAATATTCTCTTTTCATTTTCTTAGTGAAAAGTTCCATTTATTGTTAATATATATATATATATATTAAGGATTCTCATCTCTTTCCTTCTCTCTCTTGTTAGGTTCAATGGAAAAGAATGAGAATCGGCAGAAACATCCCCAGAAATCAAATGAGTACTGCACTACATGCCTTGCATACATTTACTGAATTTTAAGGCTACTGCTTTTTTCTGTTAATAATGCCATGGTGGTGGTGAGGCATTCCTTTTTCTGCTCAAGATTTCTGTTAATATTTGTACACTTAACCAGTAAGTCAAAACTTAACCTCCACGCTTGGAATAAGCTACAAATATAGTCTATTTCATGTTCCACTAATATTTATCCTTTTTTGTTGGTTAATGTCACTGTTTACTTATATTGGTACATTTAAGAAAAAAATGGATCTCAGAATATACTTGATCCCCTAGGAATAAACCACATTGAAGAGTAAGTCAGAGATCTTTAAATAGGCAAATTTTATTGTTTATTGGTTGAGACAGCTTTGCAATTCTAGAAATTTCGGGTACATAAATATTTATGTTGGGTACAAAATACATAAAGTTATAAATTGAGAAGGAAACAAATTTCCGTTTAGTAACCACATGAAATGAAACAAAGATCTTCTTGGCTTTAAAGAAATGACACAAAGATCGTCTTGGCTTTATCAAAAGAAAACAAGGATCTTCTTGGCTTTACCGAAACAAAACAAAAATCTTCTTGGCTTTATCAAAAGGAAACAGAGATTGTCTTGGCTTTATCGAAATGAAACAAATACCTTCTCAACTTTATCTTATTGGATGCATCGATACGGTTTTCATGTTAGGCATATATCAGTTTTGATGATATTACATTTCATGCTTTCTCACTTATTCTAGTATATGTTCATCTTGTAGGGTACTGGATAAACTGAGGAGATATGGACTTTCTGGAATATTGTCTTATGGATTGTTGAATACAGTCTACTATCTAATAACTTTTCTCGTTGTGTGGTGAGTCCACTGCTCTATCAACTACATGTTTACTACTTCTATTATTATGTAGAACATAATGTGACTTGTGTCTAGTGAGGCTTCCTAACTATAGGAGGTTTATTCCCTTATTCAGTATGCGTGTCGGTTATGAGAATTGGATGTTGAGGGATGATAAGATGGGAACTAGATGACTAGGCGTGGAAATTGTATAGAAAAGATAGGTAACACTTAAGTTTCTACAGTACGATGTTTGAAAGTATTTCTAGGAACTTGGATGCTGCCCCCTCTTCCCTCCTGGGCGAGTTCAAGTTTGAACAATCACAATGTTGCCTACCTTCTCTTGTTGACCAATTCCTTTAGTCTAGTCATTATTCTCTGACACACTACCCTTCTAATTATCTCTACTCTCCAATCCTACAAATATGAAATAACTATTTCCAGAACTTCTTTTTACGCAATAGTTGTAGCTAATGTTGATATTGGTCTTGTCTTTTTCCAATCGTGAACATGGGGTTCCAATTTCCCTACCTTTCGGATGTATTTAGATAACGGGTCGGGTGAGACATGGTTTCTTTTTTAGGATATCCCAAGGTTGAATCCAATGGGGATAGGGAACGTTTGTAGAAGAGGATTAGAGCACGTGGTTGTGAACCATGGATGCATACTACCTGCACCTGGATAAAAAGACCTTGTGAAGCTGCACCATATGTGCTTAAGGGTTGAGATGCCAAGCGATGACATTTCAGCCTTTTGGACATGATTTAATTCTTGCTTTCGATCAATATATGGCAGTGGGACTGATTAAAACACCTTTACTACTTGATCAGTGGGCAATAGTTTATTTTATTTTATAACTATTTTCAAATATAGCAAAATGAATCAAAATATTTATTAAATATTGCAAAATATCACTGTCTAAATATTTTATTTTAGACATAAATAATAGTCTATCGCGGTCTATCGCGGTCATCGTAGATAAACAATGATATTTTGCTATATTTGTAAATATTTTCATAAGTTTTTTCATTTAAAATAGTTTTCCTTTGTTTTATTATTATTGTTATTGTTTATTTATTTATTTTATTTTTTAAAATAACACTCCTTATGTTATAAACTTTGTTTATCTTCTGTTTATTTCATCACTCTTCCATTGGCAGTCTACCCCCTCTTGTTACCAAATTATTTATTTTCATTTTAGGTTCTACATTGCACCAGCACCTGGGAAAATGGGCTATGTTGCGGCTGCTGGAAGGTGAAAAACTTATTTCAGTTATTGTGGGAACCCCTTTTTGTATGGTTAGCTGCTTTTTGGGCCGTCTTTTTGCCCAACGGTTTCTTTCATTTTTCTTGATGAAAGCCTGGCATTTTGTTAGAATGAGATATAAATGTGTGATGGAGCTTTATACTAAGATGATGACATGTTATTACCTTGTAGATTTCTCAAAATAATGGCTACAGTATGGGCTGGAAGCCAAGTTACTAAGCTTGCAAGAGCTGCAGGGTGAGCTTTTATATTTCTGCTTATTATCAAGTGTTTTTCTGATACATGTGATTCTGCCTATCAAGTATCAAACAACCCAACTATATGAACTGTAAGGTCTAACTTGTTTATTGGTGGAAATGGCATTCAGCATATTCTAACTTCCACGGGCTCTGTTTGATAACTTTTTTTTAGGTCATGCGTGATAACACTTTTGTTTCTGATTTTCTATTTTCTAAAATTATATGCTCATTTGACAATTTATAGTCTTGTTCTATGCTTTCAAATCCATTGGAAATTGCCTTTCTGAATAAGAAAAGATTTCAGATATGTTTGTGCTTTGAAATTTTCAAAAAAAGGAAAACAAAATTGTTATTTAGTAGGATGTTAAATCTCACTCCCCTTTCAATTCTTGAAACGAGGAAGCAACCTGTTAAATCAATGCTTCTCATTCATGCAGGGCTCTTGCTTTGGCGCCATTCGTCGACAGAGGGTTGTCATGGTTCACCGTCAATTACAATTTCCAGTCTCAGGGGAAGGTTGCTAGAAAAGAAACTTCTATTCATGTATTTTGTTTCTTGTTTCATTTCATTGATTTTATGCTAAAGTTAAACCATTTACAGGCATTTATGGCGATTGTTGGGTTCTGCTTAGGATTGGCTCTCTTGTTATTCATTGTTGTTACTCTGCTTTCAGCTTAA

mRNA sequence

ATGGCAATATCCCTTGCGTCGTTTTCCCGGATTCGATCGAATTGCAGTCGAAGTCAACTTCCAGAGCTTCCCCGCCATTTCGCGCCCCTCCAGAGCCGAATAAGATTTTCTGTTAGTCGGAACCCTAGCGTCCGATTCTGCCTCATCAATGCCAAAATTAGCGCCAACGATCCATTGAAATCTGAGGATGACTTTTCCAATCATGAAATGGAAGGTTCAATGGAAAAGAATGAGAATCGGCAGAAACATCCCCAGAAATCAAATGAGGTACTGGATAAACTGAGGAGATATGGACTTTCTGGAATATTGTCTTATGGATTGTTGAATACAGTCTACTATCTAATAACTTTTCTCGTTGTGTGGTTCTACATTGCACCAGCACCTGGGAAAATGGGCTATGTTGCGGCTGCTGGAAGATTTCTCAAAATAATGGCTACAGTATGGGCTGGAAGCCAAGTTACTAAGCTTGCAAGAGCTGCAGGGGCTCTTGCTTTGGCGCCATTCGTCGACAGAGGGTTGTCATGGTTCACCGTCAATTACAATTTCCAGTCTCAGGGGAAGGCATTTATGGCGATTGTTGGGTTCTGCTTAGGATTGGCTCTCTTGTTATTCATTGTTGTTACTCTGCTTTCAGCTTAA

Coding sequence (CDS)

ATGGCAATATCCCTTGCGTCGTTTTCCCGGATTCGATCGAATTGCAGTCGAAGTCAACTTCCAGAGCTTCCCCGCCATTTCGCGCCCCTCCAGAGCCGAATAAGATTTTCTGTTAGTCGGAACCCTAGCGTCCGATTCTGCCTCATCAATGCCAAAATTAGCGCCAACGATCCATTGAAATCTGAGGATGACTTTTCCAATCATGAAATGGAAGGTTCAATGGAAAAGAATGAGAATCGGCAGAAACATCCCCAGAAATCAAATGAGGTACTGGATAAACTGAGGAGATATGGACTTTCTGGAATATTGTCTTATGGATTGTTGAATACAGTCTACTATCTAATAACTTTTCTCGTTGTGTGGTTCTACATTGCACCAGCACCTGGGAAAATGGGCTATGTTGCGGCTGCTGGAAGATTTCTCAAAATAATGGCTACAGTATGGGCTGGAAGCCAAGTTACTAAGCTTGCAAGAGCTGCAGGGGCTCTTGCTTTGGCGCCATTCGTCGACAGAGGGTTGTCATGGTTCACCGTCAATTACAATTTCCAGTCTCAGGGGAAGGCATTTATGGCGATTGTTGGGTTCTGCTTAGGATTGGCTCTCTTGTTATTCATTGTTGTTACTCTGCTTTCAGCTTAA

Protein sequence

MAISLASFSRIRSNCSRSQLPELPRHFAPLQSRIRFSVSRNPSVRFCLINAKISANDPLKSEDDFSNHEMEGSMEKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNTVYYLITFLVVWFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVNYNFQSQGKAFMAIVGFCLGLALLLFIVVTLLSA*

Homology

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BLAST of Chy10G178830 vs. ExPASy TrEMBL
Match: A0A1S3BDD7 (uncharacterized protein LOC103488806 isoform X5 OS=Cucumis melo OX=3656 GN=LOC103488806 PE=4 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 2.0e-102
Identity = 200/212 (94.34%), Postives = 202/212 (95.28%), Query Frame = 0


Query: 1   MAISLASFSRIRSNCSRSQLPELPRHFAPLQSRIRFSVSRNPSVRFCLINAKISANDPLK 60
           MAISLAS SRIRSNCSRSQ PELPR F+P QSRIRFSVSRNPSVR CL NAKISANDPLK
Sbjct: 1   MAISLASLSRIRSNCSRSQFPELPRRFSPPQSRIRFSVSRNPSVRLCLSNAKISANDPLK 60

Query: 61  SEDDFSNHEMEGSMEKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNTVYYLITFLVV 120
           SEDDFSNHE EGSMEKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNT YYL TFLVV
Sbjct: 61  SEDDFSNHETEGSMEKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNTAYYLTTFLVV 120

Query: 121 WFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVNY 180
           WFYIAPAP KMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVNY
Sbjct: 121 WFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVNY 180

Query: 181 NFQSQGKAFMAIVGFCLGLALLLFIVVTLLSA 213
           NF+SQGKAFMAIVGFCLGLALLLFIVVTLLSA
Sbjct: 181 NFESQGKAFMAIVGFCLGLALLLFIVVTLLSA 212

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BLAST of Chy10G178830 vs. ExPASy TrEMBL
Match: A0A0A0KRT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G582220 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.7e-80
Identity = 159/172 (92.44%), Postives = 163/172 (94.77%), Query Frame = 0


Query: 1   MAISLASFSRIRSNCSRSQLPELPRHFAPLQSRIRFSVSRNPSVRFCLINAKISANDPLK 60
           MAISLASFSRIRSNCSRSQLPELPRHFAPLQS+IRFSVSRNPSVRFCL NAKISANDPLK
Sbjct: 1   MAISLASFSRIRSNCSRSQLPELPRHFAPLQSQIRFSVSRNPSVRFCLSNAKISANDPLK 60

Query: 61  SEDDFSNHEMEGSMEKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNTVYYLITFLVV 120
           SEDDFSNHEMEGSMEKNEN+QKHPQKSNEVLDKLRRYGLSGILSYGLLNTVYYL TFLVV
Sbjct: 61  SEDDFSNHEMEGSMEKNENQQKHPQKSNEVLDKLRRYGLSGILSYGLLNTVYYLTTFLVV 120

Query: 121 WFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRG 173
           WFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLARAAG +    F  +G
Sbjct: 121 WFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGYVCALKFSKKG 172

[Close]

BLAST of Chy10G178830 vs. ExPASy TrEMBL
Match: A0A6J1GY06 (uncharacterized protein LOC111458238 OS=Cucurbita moschata OX=3662 GN=LOC111458238 PE=4 SV=1)

HSP 1 Score: 295.8 bits (756), Expect = 1.4e-76
Identity = 155/179 (86.59%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 34  IRFSVSRNPSVRFCLINAKISANDPLKSEDDFSNHEMEGSMEKNENRQKHPQKSNEVLDK 93
           I   VSRNPS+R CL NA+ISANDPLKSE+ FSNHE EGSMEKNEN QKHPQKS EVLDK
Sbjct: 43  INIFVSRNPSIRQCLNNAEISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDK 102

Query: 94  LRRYGLSGILSYGLLNTVYYLITFLVVWFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQV 153
           LRRYG+SGILSYGLLNTVYYL TFLVVWFYIAP P KMGYVAAAGRFLKIMATVWAGSQV
Sbjct: 103 LRRYGVSGILSYGLLNTVYYLTTFLVVWFYIAPPPAKMGYVAAAGRFLKIMATVWAGSQV 162

Query: 154 TKLARAAGALALAPFVDRGLSWFTVNYNFQSQGKAFMAIVGFCLGLALLLFIVVTLLSA 213
           TKLARAAGALA+APFVDR LSWFTV YNF+SQGKA +AIVGFCLGL+LLLFI VTLLSA
Sbjct: 163 TKLARAAGALAMAPFVDRALSWFTVKYNFKSQGKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Chy10G178830 vs. ExPASy TrEMBL
Match: A0A6J1J0R3 (uncharacterized protein LOC111482401 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111482401 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.9e-76
Identity = 153/175 (87.43%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 38  VSRNPSVRFCLINAKISANDPLKSEDDFSNHEMEGSMEKNENRQKHPQKSNEVLDKLRRY 97
           VSRNPS+R CL NA+ISANDPLKSE  FSNHE EGSMEKNEN +KHP+KS EVLDKLRRY
Sbjct: 47  VSRNPSIRQCLNNAEISANDPLKSESGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRY 106

Query: 98  GLSGILSYGLLNTVYYLITFLVVWFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLA 157
           G+SGILSYGLLNTVYYL TFLVVWFYIAPAP KMGYVAAAGRFLKIMAT+WAGSQVTKLA
Sbjct: 107 GVSGILSYGLLNTVYYLTTFLVVWFYIAPAPAKMGYVAAAGRFLKIMATIWAGSQVTKLA 166

Query: 158 RAAGALALAPFVDRGLSWFTVNYNFQSQGKAFMAIVGFCLGLALLLFIVVTLLSA 213
           RAAGALA+APFVDRGLSWFTV YNF+SQGKA +AIVGFCLGL+LLLFI VTLLSA
Sbjct: 167 RAAGALAMAPFVDRGLSWFTVKYNFKSQGKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Chy10G178830 vs. ExPASy TrEMBL
Match: A0A5A7SW01 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold65G00960 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 3.2e-76
Identity = 153/158 (96.84%), Postives = 154/158 (97.47%), Query Frame = 0


Query: 55  ANDPLKSEDDFSNHEMEGSMEKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNTVYYL 114
           ANDPLKSEDDFSNHE EGSMEKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNT YYL
Sbjct: 44  ANDPLKSEDDFSNHETEGSMEKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNTAYYL 103

Query: 115 ITFLVVWFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLS 174
            TFLVVWFYIAPAP KMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLS
Sbjct: 104 TTFLVVWFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLS 163

Query: 175 WFTVNYNFQSQGKAFMAIVGFCLGLALLLFIVVTLLSA 213
           WFTVNYNF+SQGKAFMAIVGFCLGLALLLFIVVTLLSA
Sbjct: 164 WFTVNYNFESQGKAFMAIVGFCLGLALLLFIVVTLLSA 201

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BLAST of Chy10G178830 vs. NCBI nr
Match: XP_008445925.1 (PREDICTED: uncharacterized protein LOC103488806 isoform X5 [Cucumis melo] >XP_008445926.1 PREDICTED: uncharacterized protein LOC103488806 isoform X5 [Cucumis melo])

HSP 1 Score: 380 bits (976), Expect = 2.85e-132
Identity = 200/212 (94.34%), Postives = 202/212 (95.28%), Query Frame = 0


Query: 1   MAISLASFSRIRSNCSRSQLPELPRHFAPLQSRIRFSVSRNPSVRFCLINAKISANDPLK 60
           MAISLAS SRIRSNCSRSQ PELPR F+P QSRIRFSVSRNPSVR CL NAKISANDPLK
Sbjct: 1   MAISLASLSRIRSNCSRSQFPELPRRFSPPQSRIRFSVSRNPSVRLCLSNAKISANDPLK 60

Query: 61  SEDDFSNHEMEGSMEKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNTVYYLITFLVV 120
           SEDDFSNHE EGSMEKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNT YYL TFLVV
Sbjct: 61  SEDDFSNHETEGSMEKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNTAYYLTTFLVV 120

Query: 121 WFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVNY 180
           WFYIAPAP KMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVNY
Sbjct: 121 WFYIAPAPAKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVNY 180

Query: 181 NFQSQGKAFMAIVGFCLGLALLLFIVVTLLSA 212
           NF+SQGKAFMAIVGFCLGLALLLFIVVTLLSA
Sbjct: 181 NFESQGKAFMAIVGFCLGLALLLFIVVTLLSA 212

[Close]

BLAST of Chy10G178830 vs. NCBI nr
Match: KAE8648632.1 (hypothetical protein Csa_009176 [Cucumis sativus])

HSP 1 Score: 357 bits (917), Expect = 1.80e-122
Identity = 182/187 (97.33%), Postives = 185/187 (98.93%), Query Frame = 0


Query: 1   MAISLASFSRIRSNCSRSQLPELPRHFAPLQSRIRFSVSRNPSVRFCLINAKISANDPLK 60
           MAISLASFSRIRSNCSRSQLPELPRHFAPLQS+IRFSVSRNPSVRFCL NAKISANDPLK
Sbjct: 1   MAISLASFSRIRSNCSRSQLPELPRHFAPLQSQIRFSVSRNPSVRFCLSNAKISANDPLK 60

Query: 61  SEDDFSNHEMEGSMEKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNTVYYLITFLVV 120
           SEDDFSNHEMEGSMEKNEN+QKHPQKSNEVLDKLRRYGLSGILSYGLLNTVYYL TFLVV
Sbjct: 61  SEDDFSNHEMEGSMEKNENQQKHPQKSNEVLDKLRRYGLSGILSYGLLNTVYYLTTFLVV 120

Query: 121 WFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVNY 180
           WFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVNY
Sbjct: 121 WFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVNY 180

Query: 181 NFQSQGK 187
           NF+SQGK
Sbjct: 181 NFESQGK 187

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BLAST of Chy10G178830 vs. NCBI nr
Match: KAG6601085.1 (hypothetical protein SDJN03_06318, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 296 bits (757), Expect = 8.84e-99
Identity = 156/179 (87.15%), Postives = 164/179 (91.62%), Query Frame = 0


Query: 34  IRFSVSRNPSVRFCLINAKISANDPLKSEDDFSNHEMEGSMEKNENRQKHPQKSNEVLDK 93
           I   VSRNPS+R CL NA+ISANDPLKSE+ FSNHE EGSMEKNEN QKHPQKS EVLDK
Sbjct: 43  INIFVSRNPSIRQCLDNAEISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDK 102

Query: 94  LRRYGLSGILSYGLLNTVYYLITFLVVWFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQV 153
           LRRYG+SGILSYGLLNTVYYL TFLVVWFYIAP P KMGYVAAAGRFLKIMATVWAGSQV
Sbjct: 103 LRRYGVSGILSYGLLNTVYYLTTFLVVWFYIAPPPAKMGYVAAAGRFLKIMATVWAGSQV 162

Query: 154 TKLARAAGALALAPFVDRGLSWFTVNYNFQSQGKAFMAIVGFCLGLALLLFIVVTLLSA 212
           TKLARAAGALA+APFVDRGLSWFTV YNF+SQGKA +AIVGFCLGL+LLLFI VTLLSA
Sbjct: 163 TKLARAAGALAMAPFVDRGLSWFTVKYNFKSQGKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Chy10G178830 vs. NCBI nr
Match: XP_022956520.1 (uncharacterized protein LOC111458238 [Cucurbita moschata])

HSP 1 Score: 293 bits (751), Expect = 7.24e-98
Identity = 155/179 (86.59%), Postives = 163/179 (91.06%), Query Frame = 0


Query: 34  IRFSVSRNPSVRFCLINAKISANDPLKSEDDFSNHEMEGSMEKNENRQKHPQKSNEVLDK 93
           I   VSRNPS+R CL NA+ISANDPLKSE+ FSNHE EGSMEKNEN QKHPQKS EVLDK
Sbjct: 43  INIFVSRNPSIRQCLNNAEISANDPLKSENGFSNHETEGSMEKNENHQKHPQKSIEVLDK 102

Query: 94  LRRYGLSGILSYGLLNTVYYLITFLVVWFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQV 153
           LRRYG+SGILSYGLLNTVYYL TFLVVWFYIAP P KMGYVAAAGRFLKIMATVWAGSQV
Sbjct: 103 LRRYGVSGILSYGLLNTVYYLTTFLVVWFYIAPPPAKMGYVAAAGRFLKIMATVWAGSQV 162

Query: 154 TKLARAAGALALAPFVDRGLSWFTVNYNFQSQGKAFMAIVGFCLGLALLLFIVVTLLSA 212
           TKLARAAGALA+APFVDR LSWFTV YNF+SQGKA +AIVGFCLGL+LLLFI VTLLSA
Sbjct: 163 TKLARAAGALAMAPFVDRALSWFTVKYNFKSQGKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Chy10G178830 vs. NCBI nr
Match: XP_022983937.1 (uncharacterized protein LOC111482401 isoform X2 [Cucurbita maxima])

HSP 1 Score: 293 bits (750), Expect = 1.03e-97
Identity = 153/175 (87.43%), Postives = 163/175 (93.14%), Query Frame = 0


Query: 38  VSRNPSVRFCLINAKISANDPLKSEDDFSNHEMEGSMEKNENRQKHPQKSNEVLDKLRRY 97
           VSRNPS+R CL NA+ISANDPLKSE  FSNHE EGSMEKNEN +KHP+KS EVLDKLRRY
Sbjct: 47  VSRNPSIRQCLNNAEISANDPLKSESGFSNHETEGSMEKNENHKKHPRKSIEVLDKLRRY 106

Query: 98  GLSGILSYGLLNTVYYLITFLVVWFYIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLA 157
           G+SGILSYGLLNTVYYL TFLVVWFYIAPAP KMGYVAAAGRFLKIMAT+WAGSQVTKLA
Sbjct: 107 GVSGILSYGLLNTVYYLTTFLVVWFYIAPAPAKMGYVAAAGRFLKIMATIWAGSQVTKLA 166

Query: 158 RAAGALALAPFVDRGLSWFTVNYNFQSQGKAFMAIVGFCLGLALLLFIVVTLLSA 212
           RAAGALA+APFVDRGLSWFTV YNF+SQGKA +AIVGFCLGL+LLLFI VTLLSA
Sbjct: 167 RAAGALAMAPFVDRGLSWFTVKYNFKSQGKAVVAIVGFCLGLSLLLFIAVTLLSA 221

[Close]

BLAST of Chy10G178830 vs. TAIR 10
Match: AT2G38695.1 (unknown protein; Has 65 Blast hits to 65 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 62; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 201.4 bits (511), Expect = 7.0e-52
Identity = 123/210 (58.57%), Postives = 145/210 (69.05%), Query Frame = 0


Query: 4   SLASFSRIRSNCSRSQLPELPRHFAPLQSRIRFSVSRNPSVRFCLINAKISANDPLKSED 63
           SL +FS + +N  R+Q   LP HF+      R   S             +S N   KS+ 
Sbjct: 18  SLRTFS-VLANGKRTQ-SLLPHHFSVFNQSHRLVTS-------------LSHNVSNKSDA 77

Query: 64  DFSNHEMEGSM-EKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNTVYYLITFLVVWF 123
           +      EG M +KN   +K+P  S E+L KL+RYGLSGILSYGLLNTVYY   FL+VWF
Sbjct: 78  EAERSCDEGEMLDKNRISKKNPFVSEELLKKLKRYGLSGILSYGLLNTVYYSTAFLLVWF 137

Query: 124 YIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLARAAGALALAPFVDRGLSWFTVNYNF 183
           Y+APAPGKMGY+AAA RFLK+MA VWAGSQVTKL R  GA+ALAP VDRGLSWFTV  NF
Sbjct: 138 YVAPAPGKMGYLAAAERFLKVMAMVWAGSQVTKLIRIGGAVALAPIVDRGLSWFTVKCNF 197

Query: 184 QSQGKAFMAIVGFCLGLALLLFIVVTLLSA 213
           +SQGKAF A+VG CLG+AL+LFIVVTLL A
Sbjct: 198 ESQGKAFGALVGICLGMALMLFIVVTLLWA 212

[Close]

BLAST of Chy10G178830 vs. TAIR 10
Match: AT2G38695.3 (unknown protein; Has 56 Blast hits to 54 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 178.7 bits (452), Expect = 4.9e-45
Identity = 123/258 (47.67%), Postives = 145/258 (56.20%), Query Frame = 0


Query: 4   SLASFSRIRSNCSRSQLPELPRHFAPLQSRIRFSVSRNPSVRFCLINAKISANDPLKSED 63
           SL +FS + +N  R+Q   LP HF+      R   S             +S N   KS+ 
Sbjct: 18  SLRTFS-VLANGKRTQ-SLLPHHFSVFNQSHRLVTS-------------LSHNVSNKSDA 77

Query: 64  DFSNHEMEGSM-EKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNTVYYLITFLVVWF 123
           +      EG M +KN   +K+P  S E+L KL+RYGLSGILSYGLLNTVYY   FL+VWF
Sbjct: 78  EAERSCDEGEMLDKNRISKKNPFVSEELLKKLKRYGLSGILSYGLLNTVYYSTAFLLVWF 137

Query: 124 YIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLARAAG--------------------- 183
           Y+APAPGKMGY+AAA RFLK+MA VWAGSQVTKL R  G                     
Sbjct: 138 YVAPAPGKMGYLAAAERFLKVMAMVWAGSQVTKLIRIGGEHVKFLGDKHSRWMQDSRTCT 197

Query: 184 ---------------------------ALALAPFVDRGLSWFTVNYNFQSQGKAFMAIVG 213
                                      A+ALAP VDRGLSWFTV  NF+SQGKAF A+VG
Sbjct: 198 CICSFDCYCRPYLVVMLLPMKNVDGCRAVALAPIVDRGLSWFTVKCNFESQGKAFGALVG 257

[Close]

BLAST of Chy10G178830 vs. TAIR 10
Match: AT2G38695.2 (unknown protein; Has 54 Blast hits to 54 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-29
Identity = 83/159 (52.20%), Postives = 100/159 (62.89%), Query Frame = 0


Query: 4   SLASFSRIRSNCSRSQLPELPRHFAPLQSRIRFSVSRNPSVRFCLINAKISANDPLKSED 63
           SL +FS + +N  R+Q   LP HF+      R   S             +S N   KS+ 
Sbjct: 18  SLRTFS-VLANGKRTQ-SLLPHHFSVFNQSHRLVTS-------------LSHNVSNKSDA 77

Query: 64  DFSNHEMEGSM-EKNENRQKHPQKSNEVLDKLRRYGLSGILSYGLLNTVYYLITFLVVWF 123
           +      EG M +KN   +K+P  S E+L KL+RYGLSGILSYGLLNTVYY   FL+VWF
Sbjct: 78  EAERSCDEGEMLDKNRISKKNPFVSEELLKKLKRYGLSGILSYGLLNTVYYSTAFLLVWF 137

Query: 124 YIAPAPGKMGYVAAAGRFLKIMATVWAGSQVTKLARAAG 162
           Y+APAPGKMGY+AAA RFLK+MA VWAGSQVTKL R  G
Sbjct: 138 YVAPAPGKMGYLAAAERFLKVMAMVWAGSQVTKLIRIGG 161

The following BLAST results are available for this feature:

BLAST of Chy10G178830 vs.


Match Name	E-value	Identity	Description

BLAST of Chy10G178830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BDD7	2.0e-102	94.34	uncharacterized protein LOC103488806 isoform X5 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0KRT8	4.7e-80	92.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G582220 PE=4 SV=1	[more]
A0A6J1GY06	1.4e-76	86.59	uncharacterized protein LOC111458238 OS=Cucurbita moschata OX=3662 GN=LOC1114582...	[more]
A0A6J1J0R3	1.9e-76	87.43	uncharacterized protein LOC111482401 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A5A7SW01	3.2e-76	96.84	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Chy10G178830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008445925.1	2.85e-132	94.34	PREDICTED: uncharacterized protein LOC103488806 isoform X5 [Cucumis melo] >XP_00...	[more]
KAE8648632.1	1.80e-122	97.33	hypothetical protein Csa_009176 [Cucumis sativus]	[more]
KAG6601085.1	8.84e-99	87.15	hypothetical protein SDJN03_06318, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022956520.1	7.24e-98	86.59	uncharacterized protein LOC111458238 [Cucurbita moschata]	[more]
XP_022983937.1	1.03e-97	87.43	uncharacterized protein LOC111482401 isoform X2 [Cucurbita maxima]	[more]

BLAST of Chy10G178830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38695.1	7.0e-52	58.57	unknown protein; Has 65 Blast hits to 65 proteins in 18 species: Archae - 0; Bac...	[more]
AT2G38695.3	4.9e-45	47.67	unknown protein; Has 56 Blast hits to 54 proteins in 13 species: Archae - 0; Bac...	[more]
AT2G38695.2	1.3e-29	52.20	unknown protein; Has 54 Blast hits to 54 proteins in 13 species: Archae - 0; Bac...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..86
None	No IPR available	PANTHER	PTHR34370:SF2	GAG-POL POLYPROTEIN/RETROTRANSPOSON	coord: 15..212
None	No IPR available	PANTHER	PTHR34370	OS04G0600100 PROTEIN	coord: 15..212

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G178830.1	Chy10G178830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane