Chy10G178470 (gene) Cucumber (hystrix) v1

Overview
NameChy10G178470
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionUnknown protein
LocationchrH10: 13039328 .. 13039788 (+)
RNA-Seq ExpressionChy10G178470
SyntenyChy10G178470
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGCTCCGCGGCAATCAAGGCAAAAATCTCTTTCCAAGAGTTGCCATGGTCTACACTTATCACCAAAGTTTTTAAGTGCTAAATACAGGTAGATTACTTGCAATTCAAAATCTTTCCTCTGAAAAATGAAATGAAATGACTTTATTGTGCCTTCTCCTTGAGCAACAAATGATATTCAACAAGACTAAAACAGCTGTTTGTACATCTACCTTCTTCAACTAATTCAAACACTATATTTCTATTATTTCAGATAAGAGACAATCCAGCCTGGACACAAGCATCGAACATCAGATATCGGTTTGGCTTGCGTAGAATTATAAGGTGAGTCGGTTTCCTATTGGATTATATTTTAGGAATGACATCAAGTCACTAACCAGACTTCCACTAATGGCTGAACTCTTTTGTGAAGGATGCAACGTCTGTTGTTGATTCTGATGGACAAATGGAGACGTGAATGA

mRNA sequence

ATGAAGCTCCGCGGCAATCAAGGCAAAAATCTCTTTCCAAGAGTTGCCATGATAAGAGACAATCCAGCCTGGACACAAGCATCGAACATCAGATATCGGTTTGGCTTGCGTAGAATTATAAGGATGCAACGTCTGTTGTTGATTCTGATGGACAAATGGAGACGTGAATGA

Coding sequence (CDS)

ATGAAGCTCCGCGGCAATCAAGGCAAAAATCTCTTTCCAAGAGTTGCCATGATAAGAGACAATCCAGCCTGGACACAAGCATCGAACATCAGATATCGGTTTGGCTTGCGTAGAATTATAAGGATGCAACGTCTGTTGTTGATTCTGATGGACAAATGGAGACGTGAATGA

Protein sequence

MKLRGNQGKNLFPRVAMIRDNPAWTQASNIRYRFGLRRIIRMQRLLLILMDKWRRE*
Homology
[Close]
BLAST of Chy10G178470 vs. ExPASy TrEMBL
Match: A0A0A0KL92 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174660 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.4e-18
Identity = 50/56 (89.29%), Postives = 53/56 (94.64%), Query Frame = 0 

Query: 1  MKLRGNQGKNLFPRVAMIRDNPAWTQASNIRYRFGLRRIIRMQRLLLILMDKWRRE 57
          MKLRGN+GKNLFPRVAMIRDNPAWTQASNIRY FGLRR  RMQRLLL+L+DKWRRE
Sbjct: 1  MKLRGNRGKNLFPRVAMIRDNPAWTQASNIRYWFGLRR--RMQRLLLMLIDKWRRE 54

[Close]
BLAST of Chy10G178470 vs. NCBI nr
Match: KGN50440.1 (hypothetical protein Csa_000582 [Cucumis sativus])

HSP 1 Score: 99.0 bits (245), Expect = 8.76e-26
Identity = 50/56 (89.29%), Postives = 53/56 (94.64%), Query Frame = 0 

Query: 1  MKLRGNQGKNLFPRVAMIRDNPAWTQASNIRYRFGLRRIIRMQRLLLILMDKWRRE 56
          MKLRGN+GKNLFPRVAMIRDNPAWTQASNIRY FGLRR  RMQRLLL+L+DKWRRE
Sbjct: 1  MKLRGNRGKNLFPRVAMIRDNPAWTQASNIRYWFGLRR--RMQRLLLMLIDKWRRE 54

The following BLAST results are available for this feature:
BLAST of Chy10G178470 vs.
Match NameE-valueIdentityDescription
BLAST of Chy10G178470 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KL921.4e-1889.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G174660 PE=4 SV=1[more]
BLAST of Chy10G178470 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN50440.18.76e-2689.29hypothetical protein Csa_000582 [Cucumis sativus][more]
BLAST of Chy10G178470 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy10G178470.1Chy10G178470.1mRNA