Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTATCCAAATCCCAACTCAAACTCAAAGCGAAAGCGAATTGATAAGTTTGAAGGTAGTGCTAGACAAAAAAAAGGAAGAAGATTCTATATGCTGAAGCTGCAAGAAATTTGTAGACTTCCTCTTCACAATACTTGCCCTTCCTGTTGGAACCATGGTTAAGTTGGTATCCAGTAGCAGCAAGCGCAAACACATGGCTGCAGCTGGTTCTCTGGAAAGCCTCTACCGCAGCGTGGAGAGCTTAAGTGTCAACCATTTTGATGCAAACCACAACAAAGACAGCCTCCTGAATCCTCAGCTCCCAACACCCACTGCTGATCAATCCCATATTCGAAGCCTTTTACAAATCCAATCTCCTTCGTCTTCACAACCAAAGACCTATTACACATGTTCATATTATAGTGGTTCTACTGCCATTAACTGTCGATGTTTTATTTCGACAAGTGGCACAAACTGTCCAAAATGCGGCAACTTCATGGAAGCTCATGCAAGTTATGTACATGGAGTGGGTGAAGCAATGCCTGTTGTGGGAGGTTATGTGAAAGGAGGGAACGCGGTTACGTACATGGTGATGGATGATCTCAGTGTTAAGCCCATGTCGTGTTCCACTATGTCCATCATTTCGGTTTTGAAGGAGTTGAATGTGAAGAATGTTGACCATGTTGATCAAAAGCTTATTCACTTCAACGTCCAACATGTTTGTGATTATTGA
mRNA sequence
ATGTCTATCCAAATCCCAACTCAAACTCAAAGCGAAAGCGAATTGATAAGTTTGAAGTTGGTATCCAGTAGCAGCAAGCGCAAACACATGGCTGCAGCTGGTTCTCTGGAAAGCCTCTACCGCAGCGTGGAGAGCTTAAGTGTCAACCATTTTGATGCAAACCACAACAAAGACAGCCTCCTGAATCCTCAGCTCCCAACACCCACTGCTGATCAATCCCATATTCGAAGCCTTTTACAAATCCAATCTCCTTCGTCTTCACAACCAAAGACCTATTACACATGTTCATATTATAGTGGTTCTACTGCCATTAACTGTCGATGTTTTATTTCGACAAGTGGCACAAACTGTCCAAAATGCGGCAACTTCATGGAAGCTCATGCAAGTTATGTACATGGAGTGGGTGAAGCAATGCCTGTTGTGGGAGGTTATGTGAAAGGAGGGAACGCGGTTACGTACATGGTGATGGATGATCTCAGTGTTAAGCCCATGTCGTGTTCCACTATGTCCATCATTTCGGTTTTGAAGGAGTTGAATGTGAAGAATGTTGACCATGTTGATCAAAAGCTTATTCACTTCAACGTCCAACATGTTTGTGATTATTGA
Coding sequence (CDS)
ATGTCTATCCAAATCCCAACTCAAACTCAAAGCGAAAGCGAATTGATAAGTTTGAAGTTGGTATCCAGTAGCAGCAAGCGCAAACACATGGCTGCAGCTGGTTCTCTGGAAAGCCTCTACCGCAGCGTGGAGAGCTTAAGTGTCAACCATTTTGATGCAAACCACAACAAAGACAGCCTCCTGAATCCTCAGCTCCCAACACCCACTGCTGATCAATCCCATATTCGAAGCCTTTTACAAATCCAATCTCCTTCGTCTTCACAACCAAAGACCTATTACACATGTTCATATTATAGTGGTTCTACTGCCATTAACTGTCGATGTTTTATTTCGACAAGTGGCACAAACTGTCCAAAATGCGGCAACTTCATGGAAGCTCATGCAAGTTATGTACATGGAGTGGGTGAAGCAATGCCTGTTGTGGGAGGTTATGTGAAAGGAGGGAACGCGGTTACGTACATGGTGATGGATGATCTCAGTGTTAAGCCCATGTCGTGTTCCACTATGTCCATCATTTCGGTTTTGAAGGAGTTGAATGTGAAGAATGTTGACCATGTTGATCAAAAGCTTATTCACTTCAACGTCCAACATGTTTGTGATTATTGA
Protein sequence
MSIQIPTQTQSESELISLKLVSSSSKRKHMAAAGSLESLYRSVESLSVNHFDANHNKDSLLNPQLPTPTADQSHIRSLLQIQSPSSSQPKTYYTCSYYSGSTAINCRCFISTSGTNCPKCGNFMEAHASYVHGVGEAMPVVGGYVKGGNAVTYMVMDDLSVKPMSCSTMSIISVLKELNVKNVDHVDQKLIHFNVQHVCDY*
Homology
BLAST of Chy10G177630 vs. ExPASy TrEMBL
Match:
A0A6J1CBN0 (uncharacterized protein LOC111010169 OS=Momordica charantia OX=3673 GN=LOC111010169 PE=4 SV=1)
HSP 1 Score: 124.8 bits (312), Expect = 4.1e-25
Identity = 79/163 (48.47%), Postives = 112/163 (68.71%), Query Frame = 0
Query: 35 SLESLYRSVESLSVNHFDANHNKDSLLNPQLPTPTADQSHIRSLLQIQSPSSSQPKTYYT 94
S+ ++YR+ ++L++N+F + NKD LLNP LP+ T ++SLLQIQ S P TYYT
Sbjct: 72 SIVNVYRTHQTLNLNYFASTRNKDILLNPNLPSAT-PSDELQSLLQIQ--SFHPPTTYYT 131
Query: 95 CSYYSGSTAINCR-CFISTSGTNCPKCGNFMEAHASYVHGVGEAMPV-VGGYVKGGNAVT 154
C ST CR F T G C +CG M +A+YV+G EA P+ +GGYVKGG VT
Sbjct: 132 CHV---STYNVCRYSFSGTYGAVCSRCGQSMTTNATYVYGAKEAKPLEMGGYVKGG-MVT 191
Query: 155 YMVMDDLSVKPMSCSTMSIISVLKELNVKNVDHVDQKLIHFNV 196
+MVMDDL+VKP+S S+MS ISVL +L+V++V +++KLI+ ++
Sbjct: 192 FMVMDDLTVKPIS-SSMSTISVLHQLHVEDVGQIEEKLIYLDI 226
BLAST of Chy10G177630 vs. ExPASy TrEMBL
Match:
A0A1S3CF25 (uncharacterized protein LOC103500190 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500190 PE=4 SV=1)
HSP 1 Score: 107.8 bits (268), Expect = 5.2e-20
Identity = 75/164 (45.73%), Postives = 100/164 (60.98%), Query Frame = 0
Query: 35 SLESLYRSVESLSVNHFDANHNKDSLLNPQLPTPTADQSHIRSLLQIQSPSSSQPKT-YY 94
SL +LY SV++L + +F N K+ LLNP +S + ++ QI+S SS P T YY
Sbjct: 68 SLGNLYSSVKTLDIKYFKPNETKEKLLNP--------KSQLDTVFQIESSSSLAPPTNYY 127
Query: 95 TCSYYSGSTAINCRCFISTSGTNCPKCGNFMEAHASYVHGVGEAMPVVG--GYVKGGNAV 154
TC GS F ST T CPKC M A+YV+G+GE P G GYV+GG V
Sbjct: 128 TC---CGS------YFTSTVHTQCPKCFKSMVEPATYVYGLGELKPFEGGLGYVEGG--V 187
Query: 155 TYMVMDDLSVKPMSCSTMSIISVLKELNVKNVDHVDQKLIHFNV 196
YMVMDDL+VKP+ S+MS I VLKEL V +V +D+KL++ ++
Sbjct: 188 RYMVMDDLTVKPI-FSSMSTILVLKELEVDDVRMIDEKLVYLDI 211
BLAST of Chy10G177630 vs. ExPASy TrEMBL
Match:
A0A1S3CF63 (uncharacterized protein LOC103500190 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500190 PE=4 SV=1)
HSP 1 Score: 107.8 bits (268), Expect = 5.2e-20
Identity = 75/164 (45.73%), Postives = 100/164 (60.98%), Query Frame = 0
Query: 35 SLESLYRSVESLSVNHFDANHNKDSLLNPQLPTPTADQSHIRSLLQIQSPSSSQPKT-YY 94
SL +LY SV++L + +F N K+ LLNP +S + ++ QI+S SS P T YY
Sbjct: 68 SLGNLYSSVKTLDIKYFKPNETKEKLLNP--------KSQLDTVFQIESSSSLAPPTNYY 127
Query: 95 TCSYYSGSTAINCRCFISTSGTNCPKCGNFMEAHASYVHGVGEAMPVVG--GYVKGGNAV 154
TC GS F ST T CPKC M A+YV+G+GE P G GYV+GG V
Sbjct: 128 TC---CGS------YFTSTVHTQCPKCFKSMVEPATYVYGLGELKPFEGGLGYVEGG--V 187
Query: 155 TYMVMDDLSVKPMSCSTMSIISVLKELNVKNVDHVDQKLIHFNV 196
YMVMDDL+VKP+ S+MS I VLKEL V +V +D+KL++ ++
Sbjct: 188 RYMVMDDLTVKPI-FSSMSTILVLKELEVDDVRMIDEKLVYLDI 211
BLAST of Chy10G177630 vs. ExPASy TrEMBL
Match:
A0A0A0KQ74 (Rad60-SLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G180310 PE=4 SV=1)
HSP 1 Score: 104.8 bits (260), Expect = 4.4e-19
Identity = 78/183 (42.62%), Postives = 108/183 (59.02%), Query Frame = 0
Query: 18 LKLVSS--SSKRKHMAAAGSLESLYRSVESLSVNHFDANHNKDSLLNPQLPTPTADQSHI 77
LKL+S+ SS GSL SLYRS S+ N+F++N K+SLLNP LP S +
Sbjct: 96 LKLLSTAPSSPTIVTPMIGSLSSLYRSANSMKTNYFESNRKKESLLNPHLP------SKL 155
Query: 78 RSLLQIQSPSSSQPKTYYTCSYYSGSTAINCRCFISTSGTNCPKCGNFMEAHASYVHGVG 137
+ LL S S+S+PK Y+TCS S F + C KC M A YVH
Sbjct: 156 KYLLG-SSSSASEPK-YFTCSSCPDS-------FSNGYFARCTKCSEIMTTEALYVH--- 215
Query: 138 EAMPVVGGYVKG-GNAVTYMVMDDLSVKPMSCSTMSIISVLKELNVKNVDHVDQKLIHFN 197
+ GYV G G VTYMVMDDL+VKP++ S+MS IS+L +LNV+++ H+++K+I F+
Sbjct: 216 --YDLGDGYVVGAGGMVTYMVMDDLTVKPIT-SSMSTISMLTQLNVEDIRHIEEKVIPFH 257
BLAST of Chy10G177630 vs. ExPASy TrEMBL
Match:
A0A6J1GZH1 (uncharacterized protein LOC111458549 OS=Cucurbita moschata OX=3662 GN=LOC111458549 PE=4 SV=1)
HSP 1 Score: 103.2 bits (256), Expect = 1.3e-18
Identity = 67/138 (48.55%), Postives = 88/138 (63.77%), Query Frame = 0
Query: 34 GSLESLYRSVESLSVNHFDANHNKDSLLNPQLPTPTADQSHIRSLLQIQSPSSSQPKTYY 93
GSL SLYRS+E+L++ +++ + LN LPTP QS I LL Q+ SS PKTYY
Sbjct: 62 GSLGSLYRSLEALNITYYN-----QTQLNADLPTPIT-QSQILRLL--QNYPSSGPKTYY 121
Query: 94 TCSYYSGSTAINCRCFISTSGTNCPKCGNFMEAHASYVHGVGEAMPVVGGYVKGGNAVTY 153
TCS +T C F +T CPKC M + ASYV+ EA P+VG ++KGG VTY
Sbjct: 122 TCS----NTTHCCYSFSATYNIQCPKCHCKMASPASYVYEPNEARPIVGDFLKGG-TVTY 181
Query: 154 MVMDDLSVKPMSCSTMSI 172
+VMDDL+VKP+ ST+S+
Sbjct: 182 IVMDDLTVKPLPSSTISL 186
BLAST of Chy10G177630 vs. NCBI nr
Match:
XP_022139200.1 (uncharacterized protein LOC111010169 [Momordica charantia])
HSP 1 Score: 127 bits (318), Expect = 4.52e-32
Identity = 79/163 (48.47%), Postives = 112/163 (68.71%), Query Frame = 0
Query: 35 SLESLYRSVESLSVNHFDANHNKDSLLNPQLPTPTADQSHIRSLLQIQSPSSSQPKTYYT 94
S+ ++YR+ ++L++N+F + NKD LLNP LP+ T ++SLLQIQS P TYYT
Sbjct: 72 SIVNVYRTHQTLNLNYFASTRNKDILLNPNLPSATPSDE-LQSLLQIQS--FHPPTTYYT 131
Query: 95 CSYYSGSTAINCR-CFISTSGTNCPKCGNFMEAHASYVHGVGEAMPV-VGGYVKGGNAVT 154
C ST CR F T G C +CG M +A+YV+G EA P+ +GGYVKGG VT
Sbjct: 132 CHV---STYNVCRYSFSGTYGAVCSRCGQSMTTNATYVYGAKEAKPLEMGGYVKGG-MVT 191
Query: 155 YMVMDDLSVKPMSCSTMSIISVLKELNVKNVDHVDQKLIHFNV 195
+MVMDDL+VKP+S S+MS ISVL +L+V++V +++KLI+ ++
Sbjct: 192 FMVMDDLTVKPIS-SSMSTISVLHQLHVEDVGQIEEKLIYLDI 226
BLAST of Chy10G177630 vs. NCBI nr
Match:
XP_008461634.1 (PREDICTED: uncharacterized protein LOC103500190 isoform X2 [Cucumis melo])
HSP 1 Score: 109 bits (273), Expect = 1.54e-25
Identity = 75/166 (45.18%), Postives = 100/166 (60.24%), Query Frame = 0
Query: 35 SLESLYRSVESLSVNHFDANHNKDSLLNPQLPTPTADQSHIRSLLQIQSPSSSQPKT-YY 94
SL +LY SV++L + +F N K+ LLNP+ S + ++ QI+S SS P T YY
Sbjct: 68 SLGNLYSSVKTLDIKYFKPNETKEKLLNPK--------SQLDTVFQIESSSSLAPPTNYY 127
Query: 95 TC--SYYSGSTAINCRCFISTSGTNCPKCGNFMEAHASYVHGVGEAMPVVGG--YVKGGN 154
TC SY F ST T CPKC M A+YV+G+GE P GG YV+GG
Sbjct: 128 TCCGSY-----------FTSTVHTQCPKCFKSMVEPATYVYGLGELKPFEGGLGYVEGG- 187
Query: 155 AVTYMVMDDLSVKPMSCSTMSIISVLKELNVKNVDHVDQKLIHFNV 195
V YMVMDDL+VKP+ S+MS I VLKEL V +V +D+KL++ ++
Sbjct: 188 -VRYMVMDDLTVKPIF-SSMSTILVLKELEVDDVRMIDEKLVYLDI 211
BLAST of Chy10G177630 vs. NCBI nr
Match:
XP_008461633.1 (PREDICTED: uncharacterized protein LOC103500190 isoform X1 [Cucumis melo])
HSP 1 Score: 109 bits (273), Expect = 1.91e-25
Identity = 75/166 (45.18%), Postives = 100/166 (60.24%), Query Frame = 0
Query: 35 SLESLYRSVESLSVNHFDANHNKDSLLNPQLPTPTADQSHIRSLLQIQSPSSSQPKT-YY 94
SL +LY SV++L + +F N K+ LLNP+ S + ++ QI+S SS P T YY
Sbjct: 68 SLGNLYSSVKTLDIKYFKPNETKEKLLNPK--------SQLDTVFQIESSSSLAPPTNYY 127
Query: 95 TC--SYYSGSTAINCRCFISTSGTNCPKCGNFMEAHASYVHGVGEAMPVVGG--YVKGGN 154
TC SY F ST T CPKC M A+YV+G+GE P GG YV+GG
Sbjct: 128 TCCGSY-----------FTSTVHTQCPKCFKSMVEPATYVYGLGELKPFEGGLGYVEGG- 187
Query: 155 AVTYMVMDDLSVKPMSCSTMSIISVLKELNVKNVDHVDQKLIHFNV 195
V YMVMDDL+VKP+ S+MS I VLKEL V +V +D+KL++ ++
Sbjct: 188 -VRYMVMDDLTVKPIF-SSMSTILVLKELEVDDVRMIDEKLVYLDI 211
BLAST of Chy10G177630 vs. NCBI nr
Match:
XP_022957060.1 (uncharacterized protein LOC111458549 [Cucurbita moschata] >KAG6601016.1 hypothetical protein SDJN03_06249, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 104 bits (260), Expect = 3.79e-24
Identity = 67/138 (48.55%), Postives = 88/138 (63.77%), Query Frame = 0
Query: 34 GSLESLYRSVESLSVNHFDANHNKDSLLNPQLPTPTADQSHIRSLLQIQSPSSSQPKTYY 93
GSL SLYRS+E+L++ +++ + LN LPTP QS I LLQ + SS PKTYY
Sbjct: 62 GSLGSLYRSLEALNITYYN-----QTQLNADLPTPIT-QSQILRLLQ--NYPSSGPKTYY 121
Query: 94 TCSYYSGSTAINCRCFISTSGTNCPKCGNFMEAHASYVHGVGEAMPVVGGYVKGGNAVTY 153
TCS +T C F +T CPKC M + ASYV+ EA P+VG ++KGG VTY
Sbjct: 122 TCS----NTTHCCYSFSATYNIQCPKCHCKMASPASYVYEPNEARPIVGDFLKGGT-VTY 181
Query: 154 MVMDDLSVKPMSCSTMSI 171
+VMDDL+VKP+ ST+S+
Sbjct: 182 IVMDDLTVKPLPSSTISL 186
BLAST of Chy10G177630 vs. NCBI nr
Match:
KAG7031628.1 (hypothetical protein SDJN02_05669, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 104 bits (259), Expect = 5.34e-24
Identity = 67/138 (48.55%), Postives = 88/138 (63.77%), Query Frame = 0
Query: 34 GSLESLYRSVESLSVNHFDANHNKDSLLNPQLPTPTADQSHIRSLLQIQSPSSSQPKTYY 93
GSL SLYRS+E+L++ +++ + LN LPTP QS I LLQ + SS PKTYY
Sbjct: 62 GSLGSLYRSLEALNITYYN-----QTQLNADLPTPIT-QSQILRLLQ--NYPSSGPKTYY 121
Query: 94 TCSYYSGSTAINCRCFISTSGTNCPKCGNFMEAHASYVHGVGEAMPVVGGYVKGGNAVTY 153
TCS +T C F +T CPKC M + ASYV+ EA P+VG ++KGG VTY
Sbjct: 122 TCS----NTTHCCYSFSATYNIQCPKCHCKMGSPASYVYEPNEARPIVGDFLKGGT-VTY 181
Query: 154 MVMDDLSVKPMSCSTMSI 171
+VMDDL+VKP+ ST+S+
Sbjct: 182 IVMDDLTVKPLPSSTISL 186
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1CBN0 | 4.1e-25 | 48.47 | uncharacterized protein LOC111010169 OS=Momordica charantia OX=3673 GN=LOC111010... | [more] |
A0A1S3CF25 | 5.2e-20 | 45.73 | uncharacterized protein LOC103500190 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A1S3CF63 | 5.2e-20 | 45.73 | uncharacterized protein LOC103500190 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... | [more] |
A0A0A0KQ74 | 4.4e-19 | 42.62 | Rad60-SLD domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G180310 P... | [more] |
A0A6J1GZH1 | 1.3e-18 | 48.55 | uncharacterized protein LOC111458549 OS=Cucurbita moschata OX=3662 GN=LOC1114585... | [more] |
Match Name | E-value | Identity | Description | |
XP_022139200.1 | 4.52e-32 | 48.47 | uncharacterized protein LOC111010169 [Momordica charantia] | [more] |
XP_008461634.1 | 1.54e-25 | 45.18 | PREDICTED: uncharacterized protein LOC103500190 isoform X2 [Cucumis melo] | [more] |
XP_008461633.1 | 1.91e-25 | 45.18 | PREDICTED: uncharacterized protein LOC103500190 isoform X1 [Cucumis melo] | [more] |
XP_022957060.1 | 3.79e-24 | 48.55 | uncharacterized protein LOC111458549 [Cucurbita moschata] >KAG6601016.1 hypothet... | [more] |
KAG7031628.1 | 5.34e-24 | 48.55 | hypothetical protein SDJN02_05669, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |