Chy10G176850 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G176850
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Retrotrans_gag domain-containing protein
Location	chrH10: 11255055 .. 11262212 (-)
RNA-Seq Expression	Chy10G176850
Synteny	Chy10G176850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTAACAGGACCAATTTGGATGTAGTGAGGGCTGGTGGTGGTCGTGACTTAAGGACGGTAAAAGAGGGAGGAAATTTCGTGAGGGTTAGGGGGCAAAGAACCCAAGGAAGAAGATGGTGGCTTGCTTAGGGCTGGGTGAAGCTATATATATATATATATATATATTAATAACTCCCAAACCCAAACTATTTATTAAACTTAATGGGTATATAATTGAGAAACGGAACATATGTATCAACATAAGTACAATCCTATCACAAAACTTCGTACTTCAGCTCCATTTTTAAAAATTGAAATTTAGAAAAATAGAAGGGAGGACAAGGCTAGACTAAAGTAACAAATGCCCAACCATAAGCTCAACTCAAGTTGGCTCGTACTCCAACTTCTACCTCATAAATTTACGCGTCTAACTTCAATAACGAGAAACAAAGTTCCCAAGGGCAAGATCAATCACAACTTTAATAAACCGAAGATAAAATAAAAATAAAATCCTTGAAGAGAAAAGATTAGTCCCTGTTGTAATAGTTCAACAAGGAGACAAAAAGTTGTAAAAGAAAAGAATTCTGGAATGATTACTCCTCAATCTCTGAAGGTTAAGCAAAACAAAACGGTAAAGTAAGAAAAAGGAAAGAGAAGAAAGAAATGCACTTAAGGAGAAAAGCATTTGAAGAGAGAAGAACAAGGTAATGCATTAGCATTGGAAACTCCATTTCCATTTCCATGTGAATTGACAATAAACAAAGAGAATCTAGCAGAAAAACAAGAACGTGGTAGAAAAGAAAAGAAAAAGAACTATCAGAAAAAGAGGTACCTGGTACCAAAGAAGAATGCAGTATTCTCCGTTTTTTTATCTTGTAGCAGATGCAGATGCTCGTTAATGGAGTTTTTTTTTTTTAAGAAAGGAGTAAGGAATCTGACTATAATGGCTGTTGTTGTTTGGTATTTTGTGTTATCAGCGAGAAGGAGTTCTTTGTGTTCTCAGCGAGTTGAGAGACTAAAGCGGCTTTGTCTTAAAGTTCTCCAAATCTGGGCCACCGTTACTCTGTGCATTTTGGCTAGTCTTCACGCGTACCGTCTGCCTTCCGCTCCTAATCATATTGTGTGTCTAATCCATATATAAAAGCCCATTTTCTACTCTCATCCTTTCCTTTTTAGAAATAACATGGGATATAACAACTTTTTAGGGTAGGCAAATGTCACGTCCCGTGAAACAGCTCCACTTTTTCCGCCAAAATGTGTCATAGGACTCCCAAAGAAAAACCAAAGAGGAGCCAAGCACACCCGTTCAACAGCCCAACACAACCATGTGACAACCCACTTGTGCCCACGACACATTCCCATGGTATTGGCATGTGCCCACGGAAGGCAGCCCACGAGTCCAGCATGCATGTCTCGAAACGTGTCCATGACAGCCCCATGTGCTTTTACGAACGCATACCCTATGGGCACCACCATCAGACAGAAGTCAGATGTAACGAGCATACTTGTCCAAGGCGTATTTGCCTATGGCCATATGCCCAAATACCTCCTATTTATTTTATCTTTGTGTCTTGTACATAGTTTAACTAGTTTCTTTTCTTTTTAAGTCATAAAGTTTGGGTGTGACATTTCGGAATTTTCATATGCAAGCCTACTTGAACTGAAAATGTTCAAGATGTACTATAGGGGAGACATAATAGTTGAATCCATGCCCAAGCCTTGTCGCACTCTTTGCAATCTATGCTTTCTTATTGTAATTGACAGTCTTCAATGCTTGTTTTAACAATGATTTCAATGGAATTATTTCTCTCTCACGTTTTCTAAAACATTTTCACAAAAACGTGATGGAAGACAGTTTGTCTGCGGTTTTTGGATTTTGATCGACTGCATTATTGATTGGGTCGAACAAGTGCTGCACAATTGCTAATCCCGAGTTTGAAAGGTTGCGATTGTGACAAGTGGTATCAAAGCCAAATTGGCTAGTTGACAGTTTACACAGAAAGATGTCAGTTGTAAAACAGTCGAGTAAGACCCATAATGAATGACTTGTGGACTCAAAGAGCAGATGCTCTACCTCTTGGAAGTTCCTGATTCCATCCATTTCTTAGAAAAGTGACTTGAGGAAGTTGCCAAGAAAGCCGGTGGCATTGATGCAGTATCCAATTTTCTCGATGGATGACCCATACAAGAACTGCTGACCTGAGTTGACACTCTAGAATCCTGAATTGTAAGAACAGGAAACGTCACCTACGAAAGTGGGGACAGTTCGTTGGGCTTGGCTGTCCAGATGGAAGAACGAGTTATTGAACTGGATAACTCCCAGAAAAATATGTTGGAAATGATAAACGACATGACAGATGATTTTTGGGCTACCCTCGATGTCATTAGAAACGAAATCGCAAAGGTGAATACGAAGGTGAACTTTACAATGCGAGCGTTGGCAAACCAGACTCCAGTTGGAAGAGCAATCCCATTTGGTAAAATAAAAATTCCTGAGCCCAAGCCCTTCTGTGGGCAAGAGATGTAATGGTGTTAGAAAATTTCATCTTTGACATCGAGCAGTATTTCAAGGCCACAAGTACAGTTACTGAAGAGGCCAAAGTAACGTTGGCTACCATGCATCTGCCTGAAGATGCGAAGTTGTGGTGGAGGTCCCGGTATGTTGACATCCAGGTAGGGCGTTGCATAATAGATACGTGGAATGCTCTAAAGAAAGAACTCTGATCGTAGTTCTTCCCCGAGAATGTTGAAATTCTGGCCCAGCAGACACTGCACGAACTGAATCACACTAGTAACATACGTGACTATGTGAAACAGTTGCGTGGTTGATGCTAGATATACGCCACCTGTCGAAAAAGGACAAAGTTTTCTTTTTTGTTGAAGGTTTGAAGCCCTGGACTAAGACCAAACTATATGAACAAAAGGTCCAAGATCTCACATCGGCATATGCAACGGCTGAACGGTTGTTTGACTTATCTAGTGACTCTCAAGACATAAGACGGCATCAAAGTTCCTCATCTGGGGGAAACAAAAACAACTGCCCAAGTTCCCCCAAGTCTAAAGGGGGAACAAACGTCATAATGGAGACCACATGCCCTTTCAAGTAAATACAAGAAACATCTAGCAAGGACCAAACAATTAGAACACAACCAGTCGTCCTCTTAGTAGTTTCATATGTAAAGGGCCCCATCTTGCTAGAGAGTGTCTAAACTGAACCGCCTTTAATGCTTTTCAAGCACGTTAGCCTCAGAATCAGATGATAAATTAAGTCAAACTGAAGGAGAAATTGGCCAGATAGAAGAAGGAAAAAATCCTAAAATTGTGGCCTTAAAATTTTTGTCGTCTCTCCAGAAGAAGGTAGGGGAGGCCAGTAGGCTAGCGAAAAGGGGTCTAATCTACGTGGACTGTTGGGTTAACCAAAAACCATCAAAGAGCACTATGGTGGATTCTGTGCGACCCACAATTTAATAACAGATGGCTGAATCTCCGTTGGGAGAAAGACACAGAAACAATGAAGGCCGTGAATTCAGCTGCCTTGCCTATTATCGGGCTGGTAAAACAAACGACGGTAAGGTTGGAAGCATGGAACGACCTTATAGATTTGGTGGTCATTAAGATGGATAACTTCGATGTAGTACTGGGAATGGAATTTCTACTCGAACATCAGGTTATACCAATGTTGTTAGCCAAATGTCTAATGATTACTGGATCTACGTACACCGTTCTACAAACAAGCATTCGTTAGCCTAACGGGTAAAGATGATTTCAGCCATGCAACTGAAGAAAGGCCTTGCTTAAGATGAACCAAGGTTTATGGCTCTTTCGCTTAAGTCGTTGGAAAAACTAGGGGAGATAGTCCCCAAAGACATTCTATGTGTCTTAGAGAGGAACAGGGATGTGATGCCAGATAGTTTGCCTAAATCTCTGTCTCTGCAAAGGATGATTGATCACGAGATAGAGTTACTGCTAGGGGCAAAACCGACTGCGAAGAATGCTTATCGTATGTTGCAACCGAAGTTGGTTGAACTTTGAAAACAATTTGAAGAATTACTGAATGCGGGATTTATTAGACCTGCAAAAGCTCCATATGGAGCCCCAATCCTTTTCCAAAAGAAGAATGATGAAAGTTTGCGGTTGTGCATCGACTACTGCACCCTGAACAAGATCATAGTTTTCAAAAATACCAGCTGTCCATAATCACTGACCTATTTGATGGCCTCCATGGGGCTAAGTATTTTTCGAAGCTAGACCTACGGTTGGGTTATTATCAAGTGAGAATTGTCAAAGGAGATGAGCCTAAAATGGCCTATGCCACGAGGTATGGGGCGTTCGAATTTCTTGTTATGCCATTTGGTCTTACCAATGTGTCTGCAACTTTCTGTACTCTGATGAACAAGGTCTTCCACGAATACCTTGACAAGTTTTTTGTGGTCTATCTTGATGATATAGTGGGTTATAGCTCCACGATGGAAGAACACAAGGACCACCTCCAAAGGGTTTTCCAAAAACTAAAGGAGAACCAATTGTATGTCAAGAGGGAAAAGTGTTTCTTTGCGCAAGAACGGATAGATTTCCTAGGTCATGTGATTGAGTGTGGTTGAATTAGTATGGAGGAGGGGAAAATTGTCGCGATACGTGATTGGGGAGTACCAAGGTCAGTCACCAAATTGCATTCCTTTCTCGAATTAGCTAATTATTACAGGTGATTCAAGGAAGGATTCTCTAGAAGAGCAGGTTCGCTAACTGAATTATTGAAAAAAGACAAGCCATGGGGTTGGACACCTGAATGCCAAGCCGCCTTCAATGAGTTGAAGTAAGTTATGATCGAAGGACCAGTTCTTAGGATCGCCGATGTGACCCAACCGTTTGAAGTCGAGACCGATATGTCTGATTTTGCATTGGGTGGTGTTCTCTTACAAAATGGACACCCCATCGCATATGAGAGTTGAATGCTTAATGTCGCGGAGAGGAGATACACGGTGTCTGAAAAGGAAATGCTTGTTGTGGTACATTGTTTGAGGGCCTGAAGACAATATTTACTGGGCGCAACTTTTGTTGGGAAGACAGAAAACAATGTTACTTGCCACTTCTTTGCCCAGTTGAAATTGACTTCAAAACAAGCATGGTGGTAGGAATTCCTAGCTGAGTTTGATTTTGAGTTTCAAAATAAGAAAGAGGTAAGCAATCGGACAGCCGATGCGCTTAGTTGGAAAAATGAACATGCGACTCTATGCATGTTAACTCATCTTCACGTAAGTCAGATCGATGGTCCTATGTTCGATGTTTTAAGAGAATTCCTGCAGAAAGATTTTACCATTCAGAATGTCATGAGTGTAGCTGAGGCAGGTAAGACAAGACAGTTTTGGGTTGAAGATGACCTGCTAGTAACAAAGGGGAAGCGGCGTATGTCCCTAGAAGAGGGAACCTGAGAAAGAAATTACTGCACGAGTGTCAGGACAATCTCTGGGTCGGCTATCCTCGATGGCAGAGAACATATGCCTTACTAAAAAAGGGATAATTTTGGCCCAATATGAGGGATGACGTCATGCAATACACGAAGACATGTCTCGTCTGTCAACAGGATAAAATCGAGAAAGCAAAAGTTTCTGAACTTCTCCAACCTCTGCTAGTTCCAACAAGACCGTAGGAGAGTATTTCTATGGACTTCATCACCCATCTCCCTAAAGTAGGTGATTATGAGACCATCTTGGTCATCAAAGATCTGTTTTCAAAATATGCCAATTTCATTCCTACTACCAAGCTATGCTCAGCCAAATTGACAGCCTAGTTGTTCTTCAAACATGTTGTCAAGTTATGGGGTGTACCGACAAGCATTGTGAGTGACCGAGATGGTAGGTTCATTAGCACTTTTTGGATAGAACTATTCACTTTCTTAGAGACAAGTCAGAATGTGTCCTCAAGTTACCATCCTCAAACAGACGTTCAAATTGAGCTGTTTAACTGTATGCTCGAAGAATATTTACGCCATTTTGTTAGTGCAAGGCAAAAGAATTGTGCTGAGTTGTTGGATGTAGCCCAATTTTGTTTTAATGCCCAGACGAGGTCATCGATTGGTAGAAGCCCGTTTGAGATTGTTTTGTGGTAGGCAACCTATATTGCAGCACCTTGTTGATCACCCCCATGCAGGGACGAATCCCTAGGCTTGCAACTTTACCAGGAAATTGAAACAGACAACAGCCATCGCTCGAGCCTATCTTGAGAAAGCCTCAAAGTGGATGAAGAAGTTGTCAGATAAGAAGTGTCACCCTCTTGAGTTTCGGGCGAGAGATTAGGTCCTCATTACACTGTGATCGAAATAGATTCGATTATGAGGACGCAAAGACCAACGCCTCGTGAGGAAATACGAAGGACCAGTGGAAGTGCTGAAATGGGAGGGAATGCATCTTGCAAAGTGGCGTTGCCCACATGGATGAAAATTCACCTAGTAATTCATGTGAGTAACTTGAAGCTCTGCCATCAAGATCCTCATGACATGCAGCGCAATGTCATAGTCCAACCAACCATCGACCTCAGTAAAAAAGAGGATAAAGAAGTTGAAGAAATCTTGGTCGAGCCAGTGAGGAAGGGCCGAAGACCCACAAGAAGGATCCACAAGTACTTGGTGAACGATTCTTGGGTGGAACTCAATTCCTAAGTGCCACGGAGAACGATTCTTCCTCTAAAGAACCCAATGGTAGAGGTTGGATATACGTGAGGCCAAACTCAACAAAAAGGCTGCCTTACCTATGCTGGATACCGGCACAACCAACAACATCATTGATCTACAGGAGGCCCAGCGGCTAGGTCTCAAGATCACAAGGAAAGTGCGACACTAAGTTGAAGATTATCAGTGTTAAGCCCACACATAACGTTGGATGGGCAAGGAACGTCGAGACAAGGGTAGGGAAATGGCAAGTTACACTCGATTTCCTTGTAACACCTCTAGACGATTGTAAAATTGTCCTAGGGTTGGACTTCTTTGACAAAGCCCATGCCAACATCAACACATTCAAGAAGGCCCTAGAGTTCCCCAACATACGGAGGGAGGTGCCCCTAAAACGCATGGGAGTGACAAGCCAGGTGAAACTTAGTGCCATGCGGATTACAAGACACCACTTGAGAAAAGGGTGGCGTGATAGTGTCGCAACGGAGGATTGCAAAGATTCAATGGGGTAG

mRNA sequence

ATGGCTAACAGGACCAATTTGGATGTAGTGAGGGCTGGTGGTGGTCGTGACTTAAGGACGAAAGGAGTAAGGAATCTGACTATAATGGCTGTTGTTGTTTGGTATTTTGTGTTATCAGCGAGAAGGAGTTCTTTGTGTTCTCAGCGAGTTGAGAGACTAAAGCGGCTTTGTCTTAAAGTTCTCCAAATCTGGGCCACCGTTACTCTGTGCATTTTGGCTAGTCTTCACGCGTACCGTCTGCCTTCCGCTCCTAATCATATTAGGTTGGATATACGTGAGGCCAAACTCAACAAAAAGGCTGCCTTACCTATGCTGGATACCGGCACAACCAACAACATCATTGATCTACAGGAGGCCCAGCGGCTAGGTCTCAAGATCACAAGGAAACCCACACATAACGTTGGATGGGCAAGGAACGTCGAGACAAGGGTAGGGAAATGGCAAGTTACACTCGATTTCCTTGTAACACCTCTAGACGATTGTAAAATTGTCCTAGGGTTGGACTTCTTTGACAAAGCCCATGCCAACATCAACACATTCAAGAAGGCCCTAGAGTTCCCCAACATACGGAGGGAGGTGCCCCTAAAACGCATGGGAGTGACAAGCCAGGTGAAACTTAGTGCCATGCGGATTACAAGACACCACTTGAGAAAAGGGTGGCGTGATAGTGTCGCAACGGAGGATTGCAAAGATTCAATGGGGTAG

Coding sequence (CDS)

ATGGCTAACAGGACCAATTTGGATGTAGTGAGGGCTGGTGGTGGTCGTGACTTAAGGACGAAAGGAGTAAGGAATCTGACTATAATGGCTGTTGTTGTTTGGTATTTTGTGTTATCAGCGAGAAGGAGTTCTTTGTGTTCTCAGCGAGTTGAGAGACTAAAGCGGCTTTGTCTTAAAGTTCTCCAAATCTGGGCCACCGTTACTCTGTGCATTTTGGCTAGTCTTCACGCGTACCGTCTGCCTTCCGCTCCTAATCATATTAGGTTGGATATACGTGAGGCCAAACTCAACAAAAAGGCTGCCTTACCTATGCTGGATACCGGCACAACCAACAACATCATTGATCTACAGGAGGCCCAGCGGCTAGGTCTCAAGATCACAAGGAAACCCACACATAACGTTGGATGGGCAAGGAACGTCGAGACAAGGGTAGGGAAATGGCAAGTTACACTCGATTTCCTTGTAACACCTCTAGACGATTGTAAAATTGTCCTAGGGTTGGACTTCTTTGACAAAGCCCATGCCAACATCAACACATTCAAGAAGGCCCTAGAGTTCCCCAACATACGGAGGGAGGTGCCCCTAAAACGCATGGGAGTGACAAGCCAGGTGAAACTTAGTGCCATGCGGATTACAAGACACCACTTGAGAAAAGGGTGGCGTGATAGTGTCGCAACGGAGGATTGCAAAGATTCAATGGGGTAG

Protein sequence

MANRTNLDVVRAGGGRDLRTKGVRNLTIMAVVVWYFVLSARRSSLCSQRVERLKRLCLKVLQIWATVTLCILASLHAYRLPSAPNHIRLDIREAKLNKKAALPMLDTGTTNNIIDLQEAQRLGLKITRKPTHNVGWARNVETRVGKWQVTLDFLVTPLDDCKIVLGLDFFDKAHANINTFKKALEFPNIRREVPLKRMGVTSQVKLSAMRITRHHLRKGWRDSVATEDCKDSMG*

Homology

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BLAST of Chy10G176850 vs. ExPASy TrEMBL
Match: A0A5D3E2A4 (Asp_protease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00310 PE=4 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 1.8e-27
Identity = 67/120 (55.83%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 93  EAKLNKKAALPMLDTGTTNNIIDLQEAQRLGLKITR-----------KPTHNVGWARNVE 152
           +  LN K AL MLD G T N++D +EA+RLGL+ITR           KP  N+ WA +V+
Sbjct: 2   DTTLNNKVALAMLDIGATKNVMDPKEAKRLGLRITRRSDTEIKIINGKPMMNIRWAWDVK 61

Query: 153 TRVGKWQVTLDFLVTPLDDCKIVLGLDFFDKAHANINTFKKALEFPNIRREVPLKRMGVT 202
            R+G  Q  LDFL+ PL+DCKI+LGLDF D+A+A IN FKK L F  IRREVPLKRMG T
Sbjct: 62  IRIGGCQGELDFLIAPLNDCKIILGLDFIDRAYATINLFKKTLGFSRIRREVPLKRMGAT 121

[Close]

BLAST of Chy10G176850 vs. ExPASy TrEMBL
Match: A0A5A7T3H7 (DNA damage-inducible protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00570 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 1.5e-26
Identity = 60/91 (65.93%), Postives = 70/91 (76.92%), Query Frame = 0


Query: 133 NVGWARNVETRVGKWQVTLDFLVTPLDDCKIVLGLDFFDKAHANINTFKKALEFPNIRRE 192
           N+GWA++V+TRVG WQ  LDFL+ PLDDCKIVLGLDF D AHA IN  KK L+F +IR E
Sbjct: 3   NIGWAQDVKTRVGGWQGKLDFLIAPLDDCKIVLGLDFIDTAHATINFMKKTLDFTHIREE 62

Query: 193 VPLKRMGVTSQVKLSAMRITRHHLRKGWRDS 224
            PLKRMG T +V+LSAMR+ R H  KG R S
Sbjct: 63  APLKRMGATGEVRLSAMRVRRRHKGKGSRKS 93

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BLAST of Chy10G176850 vs. ExPASy TrEMBL
Match: A0A5A7UQ97 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold216G00090 PE=4 SV=1)

HSP 1 Score: 120.6 bits (301), Expect = 9.1e-24
Identity = 65/130 (50.00%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 104 MLDTGTTNNIIDLQEAQRLGLKITR-----------KPTHNVGWARNVETRVGKWQVTLD 163
           MLDT  TNN++DL+EA+RLGL+ TR           KP  N+GW  +V+TRV  WQ  LD
Sbjct: 1   MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60

Query: 164 FLVTPLDDCKIVLGLDFFDKAHANINTFKKALEFPNIRREVPLKRMGVTSQVKLSAMRIT 223
           FL+T LDD KIV+GLDF DKAHA IN  KK L+FP IRRE             L  +   
Sbjct: 61  FLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRRETE----------GLERLHKA 120

[Close]

BLAST of Chy10G176850 vs. ExPASy TrEMBL
Match: A0A5A7T2W8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00550 PE=4 SV=1)

HSP 1 Score: 104.4 bits (259), Expect = 6.7e-19
Identity = 50/95 (52.63%), Postives = 66/95 (69.47%), Query Frame = 0


Query: 93  EAKLNKKAALPMLDTGTTNNIIDLQEAQRLGLKITR-----------KPTHNVGWARNVE 152
           +A  N KAAL MLD G T+N++D +EA+RLGL+ TR           K   N+GWA++V+
Sbjct: 363 DATFNNKAALAMLDAGATHNVMDPEEAKRLGLRTTRRSDTEIKIISAKSMKNIGWAQDVK 422

Query: 153 TRVGKWQVTLDFLVTPLDDCKIVLGLDFFDKAHAN 177
           TRVG WQ  L+FL+  LDDCKI+LGLDF D AH++
Sbjct: 423 TRVGGWQGKLNFLIAHLDDCKIILGLDFVDTAHSS 457

[Close]

BLAST of Chy10G176850 vs. ExPASy TrEMBL
Match: A0A5D3E2B7 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold587G00360 PE=4 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 2.8e-17
Identity = 50/85 (58.82%), Postives = 59/85 (69.41%), Query Frame = 0


Query: 119 AQRLGLKITR-----------KPTHNVGWARNVETRVGKWQVTLDFLVTPLDDCKIVLGL 178
           A+RLGLKITR           KP  N+G A +++TRVG WQ  LDFL+ PL+D KIV+GL
Sbjct: 241 AKRLGLKITRRSDTEIKIISAKPLRNIGRAWDIKTRVGGWQGELDFLIAPLNDYKIVIGL 300

Query: 179 DFFDKAHANINTFKKALEFPNIRRE 193
           DF DKAHA IN  KK L+FP IRRE
Sbjct: 301 DFIDKAHATINLLKKTLDFPRIRRE 325

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BLAST of Chy10G176850 vs. NCBI nr
Match: KAE8646814.1 (hypothetical protein Csa_005402 [Cucumis sativus])

HSP 1 Score: 156 bits (394), Expect = 8.01e-42
Identity = 77/145 (53.10%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 93  EAKLNKKAALPMLDTGTTNNIIDLQEAQRLGLKITRK-----------PTHNVGWARNVE 152
           +A LN +AAL +LDTG T+NIIDL+EA+RLGLKITR+           PT N GWA NV+
Sbjct: 157 DATLNNQAALALLDTGATSNIIDLEEAKRLGLKITRRDDVELKIINAEPTRNYGWAWNVK 216

Query: 153 TRVGKWQVTLDFLVTPLDDCKIVLGLDFFDKAHANINTFKKALEFPNIRREVPLKRMGVT 212
            ++G+W+  +DFL+ PLDDCK+VLGLDF  +AHA ++  ++ L FPN +REVPLK +G+T
Sbjct: 217 VKIGEWKGKIDFLLAPLDDCKVVLGLDFMKQAHAYVDATRETLVFPNKKREVPLKCIGMT 276

Query: 213 SQVKLSAMRITRHHLRKGWRDSVAT 226
            +V + AM+  RH   KG   SVAT
Sbjct: 277 GKVMIGAMQTRRHRKGKGSNGSVAT 301

[Close]

BLAST of Chy10G176850 vs. NCBI nr
Match: KAE8637433.1 (hypothetical protein CSA_004611, partial [Cucumis sativus])

HSP 1 Score: 156 bits (394), Expect = 2.15e-41
Identity = 77/145 (53.10%), Postives = 103/145 (71.03%), Query Frame = 0


Query: 93  EAKLNKKAALPMLDTGTTNNIIDLQEAQRLGLKITRK-----------PTHNVGWARNVE 152
           +A LN +AAL +LDTG T+NIIDL+EA+RLGLKITR+           PT N GWA NV+
Sbjct: 264 DATLNNQAALALLDTGATSNIIDLEEAKRLGLKITRRDDVELKIINAEPTRNYGWAWNVK 323

Query: 153 TRVGKWQVTLDFLVTPLDDCKIVLGLDFFDKAHANINTFKKALEFPNIRREVPLKRMGVT 212
            ++G+W+  +DFL+ PLDDCK+VLGLDF  +AHA ++  ++ L FPN +REVPLK +G+T
Sbjct: 324 VKIGEWKGKIDFLLAPLDDCKVVLGLDFMKQAHAYVDATRETLVFPNKKREVPLKCIGMT 383

Query: 213 SQVKLSAMRITRHHLRKGWRDSVAT 226
            +V + AM+  RH   KG   SVAT
Sbjct: 384 GKVMIGAMQTRRHRKGKGSNGSVAT 408

[Close]

BLAST of Chy10G176850 vs. NCBI nr
Match: TYK30022.1 (Asp_protease domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 131 bits (330), Expect = 4.29e-35
Identity = 67/120 (55.83%), Postives = 82/120 (68.33%), Query Frame = 0


Query: 93  EAKLNKKAALPMLDTGTTNNIIDLQEAQRLGLKITR-----------KPTHNVGWARNVE 152
           +  LN K AL MLD G T N++D +EA+RLGL+ITR           KP  N+ WA +V+
Sbjct: 2   DTTLNNKVALAMLDIGATKNVMDPKEAKRLGLRITRRSDTEIKIINGKPMMNIRWAWDVK 61

Query: 153 TRVGKWQVTLDFLVTPLDDCKIVLGLDFFDKAHANINTFKKALEFPNIRREVPLKRMGVT 201
            R+G  Q  LDFL+ PL+DCKI+LGLDF D+A+A IN FKK L F  IRREVPLKRMG T
Sbjct: 62  IRIGGCQGELDFLIAPLNDCKIILGLDFIDRAYATINLFKKTLGFSRIRREVPLKRMGAT 121

[Close]

BLAST of Chy10G176850 vs. NCBI nr
Match: KAA0035959.1 (DNA damage-inducible protein 1-like [Cucumis melo var. makuwa] >TYK30444.1 DNA damage-inducible protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 129 bits (323), Expect = 1.83e-32
Identity = 63/103 (61.17%), Postives = 75/103 (72.82%), Query Frame = 0


Query: 133 NVGWARNVETRVGKWQVTLDFLVTPLDDCKIVLGLDFFDKAHANINTFKKALEFPNIRRE 192
           N+GWA++V+TRVG WQ  LDFL+ PLDDCKIVLGLDF D AHA IN  KK L+F +IR E
Sbjct: 3   NIGWAQDVKTRVGGWQGKLDFLIAPLDDCKIVLGLDFIDTAHATINFMKKTLDFTHIREE 62

Query: 193 VPLKRMGVTSQVKLSAMRITRHHLRKGWRDSV-ATEDCKDSMG 234
            PLKRMG T +V+LSAMR+ R H  KG R S  AT   +  +G
Sbjct: 63  APLKRMGATGEVRLSAMRVRRRHKGKGSRKSKNATRTLRIGVG 105

[Close]

BLAST of Chy10G176850 vs. NCBI nr
Match: KAA0057354.1 (uncharacterized protein E6C27_scaffold280G002130 [Cucumis melo var. makuwa] >TYK30043.1 uncharacterized protein E5676_scaffold216G00090 [Cucumis melo var. makuwa])

HSP 1 Score: 119 bits (297), Expect = 1.02e-28
Identity = 65/130 (50.00%), Postives = 78/130 (60.00%), Query Frame = 0


Query: 104 MLDTGTTNNIIDLQEAQRLGLKITR-----------KPTHNVGWARNVETRVGKWQVTLD 163
           MLDT  TNN++DL+EA+RLGL+ TR           KP  N+GW  +V+TRV  WQ  LD
Sbjct: 1   MLDTDATNNVMDLKEAKRLGLRTTRRSDIEIKIIGAKPMRNLGWDWDVKTRVEGWQGKLD 60

Query: 164 FLVTPLDDCKIVLGLDFFDKAHANINTFKKALEFPNIRREVPLKRMGVTSQVKLSAMRIT 222
           FL+T LDD KIV+GLDF DKAHA IN  KK L+FP IRRE             L  +   
Sbjct: 61  FLITLLDDYKIVVGLDFVDKAHATINLLKKTLDFPRIRRETE----------GLERLHKA 120

The following BLAST results are available for this feature:

BLAST of Chy10G176850 vs.


Match Name	E-value	Identity	Description

BLAST of Chy10G176850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3E2A4	1.8e-27	55.83	Asp_protease domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A5A7T3H7	1.5e-26	65.93	DNA damage-inducible protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7UQ97	9.1e-24	50.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A5A7T2W8	6.7e-19	52.63	Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ...	[more]
A0A5D3E2B7	2.8e-17	58.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Chy10G176850 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646814.1	8.01e-42	53.10	hypothetical protein Csa_005402 [Cucumis sativus]	[more]
KAE8637433.1	2.15e-41	53.10	hypothetical protein CSA_004611, partial [Cucumis sativus]	[more]
TYK30022.1	4.29e-35	55.83	Asp_protease domain-containing protein [Cucumis melo var. makuwa]	[more]
KAA0035959.1	1.83e-32	61.17	DNA damage-inducible protein 1-like [Cucumis melo var. makuwa] >TYK30444.1 DNA d...	[more]
KAA0057354.1	1.02e-28	50.00	uncharacterized protein E6C27_scaffold280G002130 [Cucumis melo var. makuwa] >TYK...	[more]

BLAST of Chy10G176850 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021109	Aspartic peptidase domain superfamily	GENE3D	2.40.70.10	Acid Proteases	coord: 79..196 e-value: 3.9E-14 score: 54.5
IPR021109	Aspartic peptidase domain superfamily	SUPERFAMILY	50630	Acid proteases	coord: 93..178
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 95..169 e-value: 3.42579E-11 score: 56.1908

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G176850.1	Chy10G176850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043170	macromolecule metabolic process
biological_process	GO:0006807	nitrogen compound metabolic process
biological_process	GO:0044238	primary metabolic process
molecular_function	GO:0016787	hydrolase activity