Chy10G176540 (gene) Cucumber (hystrix) v1

Overview
NameChy10G176540
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
Description60S ribosomal protein L35a-1
LocationchrH10: 10754062 .. 10754737 (-)
RNA-Seq ExpressionChy10G176540
SyntenyChy10G176540
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAAGGGAAGGCAAGGAGAGAGAGTCAGGTTTGTAATCTAAACCTTCAAAAATTCGATTCTTCAACTTCATTTTCAATGATTCTAACCCTAAAATTGTTTCATTGTTCTTCCGCTTTTGTTTCTTGTTGGAATCAGACTCTACACAAGGGGAACAATTCTCGGCTACAAGAGGTAGTTAAGCATTGCTATATATTAACTCTATTCATTCATTCGACTTTGAACGATACTGGAATATGAATCTGTATAGAGTATTAGCAATTTAGTTTGTCATTTGTTTGAAAGCTAAAGATGATTGGTGGGGTGCTTAGGTCGAAGTCGAACCAATACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCTAAGGATGAAGTTTCTTGGTACCAAGGGAAACGATTGGCATATATTTACAAGGCTAAAGTGAAGAAGAATGGATCCCATTATCGTTGCATTTGGGGCAAAGTAGCAAGACCTCATGGTAACAGTGGCATCGTTAGAGCGAAGTTCAGGTCTAATCTCCCACCAAAGTCCATGGTAAATAAAATAGAACACTATCTCATGTGTTAGCGGCAGGCCTCTCTCTATCTTGGGTTTAACAAGTTTTTTTTTTTTTTACTTTTCTGTAGGGTGACAGGGTCAGAGTATTCATGTACCCCAGCAACATTTGA

mRNA sequence

ATGGTGAAGGGAAGGCAAGGAGAGAGAGTCAGACTCTACACAAGGGGAACAATTCTCGGCTACAAGAGGTCGAAGTCGAACCAATACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCTAAGGATGAAGTTTCTTGGTACCAAGGGAAACGATTGGCATATATTTACAAGGCTAAAGTGAAGAAGAATGGATCCCATTATCGTTGCATTTGGGGCAAAGTAGCAAGACCTCATGGTAACAGTGGCATCGTTAGAGCGAAGTTCAGGTCTAATCTCCCACCAAAGTCCATGGGTGACAGGGTCAGAGTATTCATGTACCCCAGCAACATTTGA

Coding sequence (CDS)

ATGGTGAAGGGAAGGCAAGGAGAGAGAGTCAGACTCTACACAAGGGGAACAATTCTCGGCTACAAGAGGTCGAAGTCGAACCAATACCCAAACACTTCTTTACTCCAGATCGAGGGTGTTAATTCTAAGGATGAAGTTTCTTGGTACCAAGGGAAACGATTGGCATATATTTACAAGGCTAAAGTGAAGAAGAATGGATCCCATTATCGTTGCATTTGGGGCAAAGTAGCAAGACCTCATGGTAACAGTGGCATCGTTAGAGCGAAGTTCAGGTCTAATCTCCCACCAAAGTCCATGGGTGACAGGGTCAGAGTATTCATGTACCCCAGCAACATTTGA

Protein sequence

MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI*
Homology
[Close]
BLAST of Chy10G176540 vs. ExPASy Swiss-Prot
Match: Q9LMK0 (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.6e-55
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 113
           K KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Chy10G176540 vs. ExPASy Swiss-Prot
Match: Q9C912 (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=1)

HSP 1 Score: 214.9 bits (546), Expect = 4.6e-55
Identity = 99/112 (88.39%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 113
           K KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Chy10G176540 vs. ExPASy Swiss-Prot
Match: Q9FZH0 (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 8.7e-54
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 2   VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAK 61
           +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 113
            KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of Chy10G176540 vs. ExPASy Swiss-Prot
Match: P51422 (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=2)

HSP 1 Score: 210.3 bits (534), Expect = 1.1e-53
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 2   VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAK 61
           +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 113
            KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of Chy10G176540 vs. ExPASy Swiss-Prot
Match: P41056 (60S ribosomal protein L33-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=RPL33B PE=1 SV=2)

HSP 1 Score: 123.2 bits (308), Expect = 1.8e-27
Identity = 58/105 (55.24%), Postives = 74/105 (70.48%), Query Frame = 0 

Query: 8   ERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAKVKKNGS 67
           E  RLY +G  L Y+RSK    PN SL++IEGV +  E  +Y GKR+AY+Y+A  +  GS
Sbjct: 3   ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGS 62

Query: 68  HYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 113
             R +WGKV R HGNSG+VRA FR+NLP K+ G  VR+F+YPSNI
Sbjct: 63  KIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107

[Close]
BLAST of Chy10G176540 vs. ExPASy TrEMBL
Match: A0A5A7T1I6 (Ribosomal protein L35A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold85G00970 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 7.9e-58
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSGIVRAKF+SNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Chy10G176540 vs. ExPASy TrEMBL
Match: A0A0A0KM11 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G198130 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 7.9e-58
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSGIVRAKF+SNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Chy10G176540 vs. ExPASy TrEMBL
Match: A0A1S3CIN8 (60S ribosomal protein L35a-1 OS=Cucumis melo OX=3656 GN=LOC103501409 PE=3 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 7.9e-58
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSGIVRAKF+SNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Chy10G176540 vs. ExPASy TrEMBL
Match: A0A6J1IM24 (60S ribosomal protein L35a-1-like OS=Cucurbita maxima OX=3661 GN=LOC111478250 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.9e-57
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKG QGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGSQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSGIVRAKF+SNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Chy10G176540 vs. ExPASy TrEMBL
Match: A0A6J1GZF1 (60S ribosomal protein L35a-1 OS=Cucurbita moschata OX=3662 GN=LOC111458531 PE=3 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 3.9e-57
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKG QGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGSQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 113
           KVKKNGSHYRCIWGKVARPHGNSGIVRAKF+SNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Chy10G176540 vs. NCBI nr
Match: XP_008463199.1 (PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo] >XP_011654980.1 60S ribosomal protein L35a-1 [Cucumis sativus] >KAA0037334.1 Ribosomal protein L35A [Cucumis melo var. makuwa] >KGN50623.1 hypothetical protein Csa_021400 [Cucumis sativus] >TYJ97573.1 Ribosomal protein L35A [Cucumis melo var. makuwa])

HSP 1 Score: 231 bits (590), Expect = 1.12e-76
Identity = 111/112 (99.11%), Postives = 112/112 (100.00%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 112
           KVKKNGSHYRCIWGKVARPHGNSGIVRAKF+SNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Chy10G176540 vs. NCBI nr
Match: XP_038891868.1 (60S ribosomal protein L35a-1 [Benincasa hispida])

HSP 1 Score: 230 bits (586), Expect = 4.55e-76
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 112
           KVKKNGSHYRCIWGKV RPHGNSGIVRAKF+SNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVTRPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Chy10G176540 vs. NCBI nr
Match: XP_022957040.1 (60S ribosomal protein L35a-1 [Cucurbita moschata] >XP_022978196.1 60S ribosomal protein L35a-1-like [Cucurbita maxima] >XP_023529930.1 60S ribosomal protein L35a-1 [Cucurbita pepo subsp. pepo] >KAG7031585.1 60S ribosomal protein L35a-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 229 bits (584), Expect = 9.18e-76
Identity = 110/112 (98.21%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKG QGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGSQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 112
           KVKKNGSHYRCIWGKVARPHGNSGIVRAKF+SNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Chy10G176540 vs. NCBI nr
Match: XP_022156899.1 (60S ribosomal protein L35a-1 [Momordica charantia])

HSP 1 Score: 227 bits (578), Expect = 7.56e-75
Identity = 108/112 (96.43%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGR+GERVRLY RGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGREGERVRLYIRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 112
           KVKKNG+HYRCIWGKVARPHGNSGIVRAKF+SNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Chy10G176540 vs. NCBI nr
Match: XP_022139205.1 (60S ribosomal protein L35a-1-like [Momordica charantia])

HSP 1 Score: 226 bits (577), Expect = 1.07e-74
Identity = 107/112 (95.54%), Postives = 111/112 (99.11%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGR+GERVRLY RGT+LGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA
Sbjct: 1   MVKGREGERVRLYIRGTVLGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 112
           KVKKNG+HYRCIWGKVARPHGNSGIVRAKF+SNLPPKSMGDRVRVFMYPSNI
Sbjct: 61  KVKKNGTHYRCIWGKVARPHGNSGIVRAKFKSNLPPKSMGDRVRVFMYPSNI 112

[Close]
BLAST of Chy10G176540 vs. TAIR 10
Match: AT1G07070.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 214.9 bits (546), Expect = 3.3e-56
Identity = 99/112 (88.39%), Postives = 106/112 (94.64%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+Q+EGVN+ +EVSWY+GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 113
           K KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Chy10G176540 vs. TAIR 10
Match: AT1G74270.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 214.9 bits (546), Expect = 3.3e-56
Identity = 99/112 (88.39%), Postives = 107/112 (95.54%), Query Frame = 0 

Query: 1   MVKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKA 60
           MVKGRQGERVRLY RGTILGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKR+AYIYKA
Sbjct: 1   MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKA 60

Query: 61  KVKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 113
           K KKNGSHYRCIWGKV RPHGNSG+VRAKF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  KTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112

[Close]
BLAST of Chy10G176540 vs. TAIR 10
Match: AT1G41880.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 210.7 bits (535), Expect = 6.2e-55
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 2   VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAK 61
           +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 113
            KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

[Close]
BLAST of Chy10G176540 vs. TAIR 10
Match: AT3G55750.1 (Ribosomal protein L35Ae family protein )

HSP 1 Score: 210.3 bits (534), Expect = 8.1e-55
Identity = 96/111 (86.49%), Postives = 106/111 (95.50%), Query Frame = 0 

Query: 2   VKGRQGERVRLYTRGTILGYKRSKSNQYPNTSLLQIEGVNSKDEVSWYQGKRLAYIYKAK 61
           +KGRQGERVRLY RGT+LGYKRSKSNQYPNTSL+QIEGVN+++EV+WY+GKRLAYIYKAK
Sbjct: 1   MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAK 60

Query: 62  VKKNGSHYRCIWGKVARPHGNSGIVRAKFRSNLPPKSMGDRVRVFMYPSNI 113
            KKNGSHYRCIWGKV RPHGNSG+VR+KF SNLPPKSMG RVRVFMYPSNI
Sbjct: 61  TKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111

The following BLAST results are available for this feature:
BLAST of Chy10G176540 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LMK04.6e-5588.3960S ribosomal protein L35a-1 OS=Arabidopsis thaliana OX=3702 GN=RPL35AA PE=3 SV=... [more]
Q9C9124.6e-5588.3960S ribosomal protein L35a-3 OS=Arabidopsis thaliana OX=3702 GN=RPL35AC PE=3 SV=... [more]
Q9FZH08.7e-5486.4960S ribosomal protein L35a-2 OS=Arabidopsis thaliana OX=3702 GN=RPL35AB PE=3 SV=... [more]
P514221.1e-5386.4960S ribosomal protein L35a-4 OS=Arabidopsis thaliana OX=3702 GN=RPL35AD PE=3 SV=... [more]
P410561.8e-2755.2460S ribosomal protein L33-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S2... [more]
BLAST of Chy10G176540 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7T1I67.9e-5899.11Ribosomal protein L35A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold8... [more]
A0A0A0KM117.9e-5899.11Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G198130 PE=3 SV=1[more]
A0A1S3CIN87.9e-5899.1160S ribosomal protein L35a-1 OS=Cucumis melo OX=3656 GN=LOC103501409 PE=3 SV=1[more]
A0A6J1IM243.9e-5798.2160S ribosomal protein L35a-1-like OS=Cucurbita maxima OX=3661 GN=LOC111478250 PE... [more]
A0A6J1GZF13.9e-5798.2160S ribosomal protein L35a-1 OS=Cucurbita moschata OX=3662 GN=LOC111458531 PE=3 ... [more]
BLAST of Chy10G176540 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008463199.11.12e-7699.11PREDICTED: 60S ribosomal protein L35a-1 [Cucumis melo] >XP_011654980.1 60S ribos... [more]
XP_038891868.14.55e-7698.2160S ribosomal protein L35a-1 [Benincasa hispida][more]
XP_022957040.19.18e-7698.2160S ribosomal protein L35a-1 [Cucurbita moschata] >XP_022978196.1 60S ribosomal ... [more]
XP_022156899.17.56e-7596.4360S ribosomal protein L35a-1 [Momordica charantia][more]
XP_022139205.11.07e-7495.5460S ribosomal protein L35a-1-like [Momordica charantia][more]
BLAST of Chy10G176540 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G07070.13.3e-5688.39Ribosomal protein L35Ae family protein [more]
AT1G74270.13.3e-5688.39Ribosomal protein L35Ae family protein [more]
AT1G41880.16.2e-5586.49Ribosomal protein L35Ae family protein [more]
AT3G55750.18.1e-5586.49Ribosomal protein L35Ae family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038661Ribosomal protein L35A superfamilyGENE3D2.40.10.190translation elongation factor selb, chain A, domain 4coord: 6..112
e-value: 8.6E-51
score: 172.4
IPR001780Ribosomal protein L35APFAMPF01247Ribosomal_L35Aecoord: 12..106
e-value: 1.1E-43
score: 147.4
IPR001780Ribosomal protein L35APANTHERPTHR1090260S RIBOSOMAL PROTEIN L35Acoord: 1..112
IPR001780Ribosomal protein L35AHAMAPMF_00573Ribosomal_L35Aecoord: 14..106
score: 25.128878
NoneNo IPR availablePANTHERPTHR10902:SF2060S RIBOSOMAL PROTEIN L35A-1coord: 1..112
IPR018266Ribosomal protein L35Ae, conserved sitePROSITEPS01105RIBOSOMAL_L35AEcoord: 74..95
IPR009000Translation protein, beta-barrel domain superfamilySUPERFAMILY50447Translation proteinscoord: 12..106

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy10G176540.1Chy10G176540.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006412 translation
cellular_component GO:0005829 cytosol
cellular_component GO:0005840 ribosome
molecular_function GO:0003735 structural constituent of ribosome