Chy10G176500 (gene) Cucumber (hystrix) v1

Overview
NameChy10G176500
Typegene
OrganismCucumis hystrix (Cucumber (hystrix) v1)
DescriptionGATA type zinc finger transcription factor family protein
LocationchrH10: 10739638 .. 10741481 (+)
RNA-Seq ExpressionChy10G176500
SyntenyChy10G176500
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCGTTTATTGGCACCCAACAGAAGTGCAAAGCTTGTGACAAAACTGTGTACCTTGTAGATCAGTTATCTGCTGATGGAGTTTCTTTCCACAAGTCATGTTTCAAATGTAGCCATTGCAAAGGAACTCTTAAGGTACATCATTATATTTTCAGGACTCGTTGATAGCTTCTCTTTTATGTTATCCTTAATCTTTAAACTGTTCTGCCTCATTTGAACTTCAAAAGGAATGGAAAAAGTTGAAGGATCTTTTAATTGAAAAGTTATAGGGAGTGTATGAAGAACTGTTTTCAAAACAACAATAATTAAGAAAAGACGGTGTTTGGGTAACTATTTTTATTTATCATCATTTTTCAGTTTTTATCCTACAGATGATATGTTCTTCTGAACAATTAAAACTGGTTTTTCTCCCACATTAATCTTAACCTTAAAAGCCATTCATCCAGTTACAGAAAGTCAAAACAGCAAAACAGCCTCCTAAACAACCCCTTGGTTTCATTTATTATCTCTCCTCTCAGAGCCATGTTTATAAAACTGTTCTCTCTCTACCTCTCTCTGGCTCCCTTCTTGCGAGGGTTTTCATGGACAATTAGAGTGAGTACTGTGTGGTGTTTAAAAGGTAAACAGATAAAATATAATTCCAGCTTATATATATACATACACACACACTATCACTGAGCAACTTTTGGGGAGTCAGAATGTGAGTACTTGTTCTAAAATAACTTGTTAAATTCTTTCAGCTGAGTAATTATTCTTCAATGGATGGTGTTTTGTACTGTAAGCCTCATTTTGAGCAGCTGTTCAAGGAAACTGGCAACTTCAGCAAGAACTTTCTATCTCGTATGTTCCAAACATTCGTTCAATATAAGAGACACTCTACATTATTGATCTTGTAAGTATTGCTTGTTACTAAAACCTTCTATACTTCTCTTTTTCTACAGCTGCAAAGTCCTCTGAGAAGCCAACTCCTGAGCTGGTAAATTTAAACCCAATGCTGCAGTTAGTTGTTATTAAATTTATAAACAGTATGCTCATTCAGTATCCTCTTGTTGATTCTAGACTAGGTCGCCAAGCAAAGCTGCCAGCATGTTTTCTGGGACACAAGAAAAATGTGCTACATGTGGAAAAACTGCATATCCACTGGAGAAGGTTAGTTTAGAAGGCGTTGGAAAGATATCCAAAATTTTAAAACCTGCTTAATCATATCAATGGTCAATTTTCTCACCCTTTTCGAACCATCTGCATATCTATGATGGACTGAATTATCTTTCTGTCGTTGTTTGAACTTGTTTAGCATACTATTGTTTCCACATCTACATATCAACCTCTATAAGAAAGGGATATTCGTTAAAACTACTACATCTAAATGAGTTGGTTTTTTGAACGGCTTGAATGCTGCTCTTGTTTAAGACAACTAGTGAACTTCATCTGTAAGCTTTGAGGAACTGTGGAACTTACATGTCATGTTCTTAATTTGCTTGATCTATAGTATGTCCTGCTGAGGTAGAAATGGTTGCATCTCAACTTTTAAGTAGTTTTTCTGGCATGGGTACTTTGTATGATCTGTGCGGATGTTATTTTATCAGTAATAGATCGTGTGAATTGCTTTTATCCAGGTTACAGTTGAGAGTCAAGCCTATCACAAGTCATGTTTTAAATGCTCACATGGTGGCTGTTCTTTATCTCCATCAAACTATGCTGCACTCGATGGAATTTTGTACTGCAAACACCACTTTTCACAGCTTTTCAAGGAAAAGGGAAGCTACAACCATCTGATAAAATCTGCATCAACGAAGCGTCAAGCAGCGACCTCCGATCCGGACCCTTCAAAAGTTGAGTCATAA

mRNA sequence

ATGTCGTTTATTGGCACCCAACAGAAGTGCAAAGCTTGTGACAAAACTGTGTACCTTGTAGATCAGTTATCTGCTGATGGAGTTTCTTTCCACAAGTCATGTTTCAAATGTAGCCATTGCAAAGGAACTCTTAAGCTGAGTAATTATTCTTCAATGGATGGTGTTTTGTACTGTAAGCCTCATTTTGAGCAGCTGTTCAAGGAAACTGGCAACTTCAGCAAGAACTTTCTATCTCCTGCAAAGTCCTCTGAGAAGCCAACTCCTGAGCTGACTAGGTCGCCAAGCAAAGCTGCCAGCATGTTTTCTGGGACACAAGAAAAATGTGCTACATGTGGAAAAACTGCATATCCACTGGAGAAGGTTACAGTTGAGAGTCAAGCCTATCACAAGTCATGTTTTAAATGCTCACATGGTGGCTGTTCTTTATCTCCATCAAACTATGCTGCACTCGATGGAATTTTGTACTGCAAACACCACTTTTCACAGCTTTTCAAGGAAAAGGGAAGCTACAACCATCTGATAAAATCTGCATCAACGAAGCGTCAAGCAGCGACCTCCGATCCGGACCCTTCAAAAGTTGAGTCATAA

Coding sequence (CDS)

ATGTCGTTTATTGGCACCCAACAGAAGTGCAAAGCTTGTGACAAAACTGTGTACCTTGTAGATCAGTTATCTGCTGATGGAGTTTCTTTCCACAAGTCATGTTTCAAATGTAGCCATTGCAAAGGAACTCTTAAGCTGAGTAATTATTCTTCAATGGATGGTGTTTTGTACTGTAAGCCTCATTTTGAGCAGCTGTTCAAGGAAACTGGCAACTTCAGCAAGAACTTTCTATCTCCTGCAAAGTCCTCTGAGAAGCCAACTCCTGAGCTGACTAGGTCGCCAAGCAAAGCTGCCAGCATGTTTTCTGGGACACAAGAAAAATGTGCTACATGTGGAAAAACTGCATATCCACTGGAGAAGGTTACAGTTGAGAGTCAAGCCTATCACAAGTCATGTTTTAAATGCTCACATGGTGGCTGTTCTTTATCTCCATCAAACTATGCTGCACTCGATGGAATTTTGTACTGCAAACACCACTTTTCACAGCTTTTCAAGGAAAAGGGAAGCTACAACCATCTGATAAAATCTGCATCAACGAAGCGTCAAGCAGCGACCTCCGATCCGGACCCTTCAAAAGTTGAGTCATAA

Protein sequence

MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKPHFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEKVTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTKRQAATSDPDPSKVES*
Homology
[Close]
BLAST of Chy10G176500 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 325.5 bits (833), Expect = 4.2e-88
Identity = 149/186 (80.11%), Postives = 168/186 (90.32%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSF GTQQKCKAC+KTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSM+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+G+F+KNF SPAKS++K TPELTR+PS+ A  FSGTQEKCATC KT YP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RQAATS 187
           R AA +
Sbjct: 181 RSAAAA 186

[Close]
BLAST of Chy10G176500 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 6.7e-86
Identity = 146/187 (78.07%), Postives = 168/187 (89.84%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSF GTQQKC+AC+KTVY V+ LSADG+S+HK+CFKCSHCK  L+LSNYSSM+GV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKS-SEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLE 120
           HFEQLFKE+G+FSKNF SPAK  ++KPTPEL R+PS+ A MFSGTQ+KCATC KT YP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSAST 180
           KVTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS 
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KRQAATS 187
           KR  A +
Sbjct: 181 KRATAAA 187

[Close]
BLAST of Chy10G176500 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 6.5e-73
Identity = 124/186 (66.67%), Postives = 158/186 (84.95%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSF GT  KCKACDKTVY++D L+ +G ++HKSCF+C+HCKGTL +SNYSSMDGVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+GN+SKNF   A  +EKP   LTR+PSK +S FSGTQ+KCATC KT YPLEK
Sbjct: 61  HFEQLFKESGNYSKNF--QAGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VT+E ++YHK+CF+C+H GC L+ S+YA+L+G+LYCK HF+QLF EKGSYNH+ ++A+  
Sbjct: 121 VTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANH 180

Query: 181 RQAATS 187
           R++A+S
Sbjct: 181 RRSASS 184

[Close]
BLAST of Chy10G176500 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 6.1e-71
Identity = 120/194 (61.86%), Postives = 160/194 (82.47%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSF GT  KC  CDKTVY+VD LS +G+ +HKSCF+C+HCKGTL++SNYSSMDGVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+GNFSKNF  P K+ +   PELTR+PSK +S+F GTQ+KCA C KT YPLEK
Sbjct: 61  HFEQLFKESGNFSKNF-QPGKTEK---PELTRTPSKISSIFCGTQDKCAACEKTVYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           + +E + +HK+CF+C+HGGC+L+ S+YA+LD +LYC+HHF+QLF EKG+Y H++++A+ +
Sbjct: 121 IQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHR 180

Query: 181 RQAA--TSDPDPSK 193
           R A+  T  P+P++
Sbjct: 181 RTASGNTLPPEPTE 190

[Close]
BLAST of Chy10G176500 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 6.7e-70
Identity = 125/204 (61.27%), Postives = 154/204 (75.49%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSF GTQ KC ACDKTV+ +D L+ADGV +HK+CFKCSHCKG L + +YSSMDGVLYCK 
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETG+FSK F    +S++K   EL R+PSK  S FSGTQ+KCA C KT YPLEK
Sbjct: 61  HFEQLFKETGSFSKKFAPGCRSTDK---ELARAPSKICSAFSGTQDKCAACQKTVYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSAST- 180
           +T+E ++YHKSCFKCSHGGC L+ S+YAAL+G+LYCK HF QLF EKGSYNH+ K + + 
Sbjct: 121 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSESQ 180

Query: 181 --------KRQAATSDPDPSKVES 196
                   + Q A   PD ++ ++
Sbjct: 181 EVLPEVVPEEQPAPPPPDENREDN 201

[Close]
BLAST of Chy10G176500 vs. ExPASy TrEMBL
Match: A0A0A0KQF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G198170 PE=4 SV=1)

HSP 1 Score: 399.8 bits (1026), Expect = 6.5e-108
Identity = 193/195 (98.97%), Postives = 193/195 (98.97%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSFIGTQQKCKACDKTVY VDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP
Sbjct: 1   MSFIGTQQKCKACDKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKVES 196
           RQAATSDPDPSKVES
Sbjct: 181 RQAATSDPDPSKVES 195

[Close]
BLAST of Chy10G176500 vs. ExPASy TrEMBL
Match: A0A1S3CIM8 (LIM domain-containing protein WLIM2b-like OS=Cucumis melo OX=3656 GN=LOC103501413 PE=4 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.5e-106
Identity = 190/195 (97.44%), Postives = 192/195 (98.46%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSFIGTQQKCKACDKTVY VDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP
Sbjct: 1   MSFIGTQQKCKACDKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPS+AASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSRAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAAL+GILYCKHHFSQLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKVES 196
           RQAATSD DPSKVES
Sbjct: 181 RQAATSDSDPSKVES 195

[Close]
BLAST of Chy10G176500 vs. ExPASy TrEMBL
Match: A0A6J1DT64 (LIM domain-containing protein WLIM2b-like OS=Momordica charantia OX=3673 GN=LOC111023731 PE=4 SV=1)

HSP 1 Score: 382.1 bits (980), Expect = 1.4e-102
Identity = 183/194 (94.33%), Postives = 188/194 (96.91%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSFIGTQQKCKAC+KTVY VDQLSADGV+FHKSCFKCSHCKGTLKLSNYSSM+GVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKS++KPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKVE 195
           RQAATS PD   VE
Sbjct: 181 RQAATSVPDAENVE 194

[Close]
BLAST of Chy10G176500 vs. ExPASy TrEMBL
Match: A0A6J1KBB9 (LIM domain-containing protein WLIM2a-like OS=Cucurbita maxima OX=3661 GN=LOC111491761 PE=4 SV=1)

HSP 1 Score: 380.9 bits (977), Expect = 3.1e-102
Identity = 182/194 (93.81%), Postives = 188/194 (96.91%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSFIGTQQKCKAC+KTVY VDQLSADGV+FHK CFKCSHCKGTLKLSNYSSM+GVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVAFHKLCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKS++KPTPEL RSPSKAA MFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSADKPTPELNRSPSKAARMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKVE 195
           RQAATSDP+ SKVE
Sbjct: 181 RQAATSDPNASKVE 194

[Close]
BLAST of Chy10G176500 vs. ExPASy TrEMBL
Match: A0A6J1GYT7 (LIM domain-containing protein WLIM2b OS=Cucurbita moschata OX=3662 GN=LOC111458736 PE=4 SV=1)

HSP 1 Score: 380.6 bits (976), Expect = 4.1e-102
Identity = 183/194 (94.33%), Postives = 186/194 (95.88%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSFIGTQQKCKAC+KTVY VDQLSADGV+FHKSCFKCSHC GTLKLSNYSSM+GVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVAFHKSCFKCSHCSGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE GNFSKNFLS AKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKEAGNFSKNFLSTAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSA  K
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSALMK 180

Query: 181 RQAATSDPDPSKVE 195
           RQ ATSDPD SKVE
Sbjct: 181 RQVATSDPDTSKVE 194

[Close]
BLAST of Chy10G176500 vs. NCBI nr
Match: XP_004150238.1 (LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_031741833.1 LIM domain-containing protein WLIM2b [Cucumis sativus] >KGN50627.1 hypothetical protein Csa_021390 [Cucumis sativus])

HSP 1 Score: 401 bits (1030), Expect = 4.55e-141
Identity = 193/195 (98.97%), Postives = 193/195 (98.97%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSFIGTQQKCKACDKTVY VDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP
Sbjct: 1   MSFIGTQQKCKACDKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKVES 195
           RQAATSDPDPSKVES
Sbjct: 181 RQAATSDPDPSKVES 195

[Close]
BLAST of Chy10G176500 vs. NCBI nr
Match: XP_008463203.1 (PREDICTED: LIM domain-containing protein WLIM2b-like [Cucumis melo] >XP_008463204.1 PREDICTED: LIM domain-containing protein WLIM2b-like [Cucumis melo] >XP_008463205.1 PREDICTED: LIM domain-containing protein WLIM2b-like [Cucumis melo])

HSP 1 Score: 395 bits (1015), Expect = 8.82e-139
Identity = 190/195 (97.44%), Postives = 192/195 (98.46%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSFIGTQQKCKACDKTVY VDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP
Sbjct: 1   MSFIGTQQKCKACDKTVYPVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPS+AASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSRAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAAL+GILYCKHHFSQLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKVES 195
           RQAATSD DPSKVES
Sbjct: 181 RQAATSDSDPSKVES 195

[Close]
BLAST of Chy10G176500 vs. NCBI nr
Match: XP_038891809.1 (LIM domain-containing protein WLIM2b-like [Benincasa hispida] >XP_038891810.1 LIM domain-containing protein WLIM2b-like [Benincasa hispida] >XP_038891811.1 LIM domain-containing protein WLIM2b-like [Benincasa hispida])

HSP 1 Score: 392 bits (1008), Expect = 1.03e-137
Identity = 188/195 (96.41%), Postives = 192/195 (98.46%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSF+GTQQKCKAC+KTVY VDQLSADGV+FHKSCFKCSHCKGTLKLSNYSSM+GVLYCKP
Sbjct: 1   MSFVGTQQKCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKVES 195
           RQAATSD DPSKVES
Sbjct: 181 RQAATSDLDPSKVES 195

[Close]
BLAST of Chy10G176500 vs. NCBI nr
Match: XP_023549082.1 (LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_023549090.1 LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_023549098.1 LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_023549105.1 LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_023549115.1 LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 384 bits (986), Expect = 2.33e-134
Identity = 183/194 (94.33%), Postives = 188/194 (96.91%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSFIGTQQKCKAC+KTVY VDQLSADGV+FHK CFKCSHCKGTLKLSNYSSM+GVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVAFHKLCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKS++KPTPELTRSPSKAA MFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSADKPTPELTRSPSKAAGMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKVE 194
           RQAA SDPD SKVE
Sbjct: 181 RQAAISDPDTSKVE 194

[Close]
BLAST of Chy10G176500 vs. NCBI nr
Match: XP_022156896.1 (LIM domain-containing protein WLIM2b-like [Momordica charantia] >XP_022156897.1 LIM domain-containing protein WLIM2b-like [Momordica charantia] >XP_022156898.1 LIM domain-containing protein WLIM2b-like [Momordica charantia])

HSP 1 Score: 383 bits (984), Expect = 4.71e-134
Identity = 183/194 (94.33%), Postives = 188/194 (96.91%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSFIGTQQKCKAC+KTVY VDQLSADGV+FHKSCFKCSHCKGTLKLSNYSSM+GVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVDQLSADGVAFHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKETGNFSKNFLSPAKS++KPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK
Sbjct: 61  HFEQLFKETGNFSKNFLSPAKSTDKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RQAATSDPDPSKVE 194
           RQAATS PD   VE
Sbjct: 181 RQAATSVPDAENVE 194

[Close]
BLAST of Chy10G176500 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 325.5 bits (833), Expect = 3.0e-89
Identity = 149/186 (80.11%), Postives = 168/186 (90.32%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSF GTQQKCKAC+KTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSM+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+G+F+KNF SPAKS++K TPELTR+PS+ A  FSGTQEKCATC KT YP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RQAATS 187
           R AA +
Sbjct: 181 RSAAAA 186

[Close]
BLAST of Chy10G176500 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 325.5 bits (833), Expect = 3.0e-89
Identity = 149/186 (80.11%), Postives = 168/186 (90.32%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSF GTQQKCKAC+KTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSM+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+G+F+KNF SPAKS++K TPELTR+PS+ A  FSGTQEKCATC KT YP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RQAATS 187
           R AA +
Sbjct: 181 RSAAAA 186

[Close]
BLAST of Chy10G176500 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 325.5 bits (833), Expect = 3.0e-89
Identity = 149/186 (80.11%), Postives = 168/186 (90.32%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSF GTQQKCKAC+KTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSM+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+G+F+KNF SPAKS++K TPELTR+PS+ A  FSGTQEKCATC KT YP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RQAATS 187
           R AA +
Sbjct: 181 RSAAAA 186

[Close]
BLAST of Chy10G176500 vs. TAIR 10
Match: AT3G55770.4 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 325.5 bits (833), Expect = 3.0e-89
Identity = 149/186 (80.11%), Postives = 168/186 (90.32%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSF GTQQKCKAC+KTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSM+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+G+F+KNF SPAKS++K TPELTR+PS+ A  FSGTQEKCATC KT YP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RQAATS 187
           R AA +
Sbjct: 181 RSAAAA 186

[Close]
BLAST of Chy10G176500 vs. TAIR 10
Match: AT3G55770.5 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 325.5 bits (833), Expect = 3.0e-89
Identity = 149/186 (80.11%), Postives = 168/186 (90.32%), Query Frame = 0 

Query: 1   MSFIGTQQKCKACDKTVYLVDQLSADGVSFHKSCFKCSHCKGTLKLSNYSSMDGVLYCKP 60
           MSF GTQQKCKAC+KTVY V+ LSADGV +HKSCFKC+HCK  L+LS+YSSM+GVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFSKNFLSPAKSSEKPTPELTRSPSKAASMFSGTQEKCATCGKTAYPLEK 120
           HFEQLFKE+G+F+KNF SPAKS++K TPELTR+PS+ A  FSGTQEKCATC KT YP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQAYHKSCFKCSHGGCSLSPSNYAALDGILYCKHHFSQLFKEKGSYNHLIKSASTK 180
           VTVESQ YHKSCFKCSHGGC +SPSNYAAL+GILYCKHHF+QLFKEKGSYNHLIKSAS K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RQAATS 187
           R AA +
Sbjct: 181 RSAAAA 186

The following BLAST results are available for this feature:
BLAST of Chy10G176500 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9M0474.2e-8880.11LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P... [more]
O041936.7e-8678.07LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P... [more]
O808396.5e-7366.67LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P... [more]
Q1ECF56.1e-7161.86LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P... [more]
Q7F9R96.7e-7061.27LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN... [more]
BLAST of Chy10G176500 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KQF56.5e-10898.97Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G198170 PE=4 SV=1[more]
A0A1S3CIM83.5e-10697.44LIM domain-containing protein WLIM2b-like OS=Cucumis melo OX=3656 GN=LOC10350141... [more]
A0A6J1DT641.4e-10294.33LIM domain-containing protein WLIM2b-like OS=Momordica charantia OX=3673 GN=LOC1... [more]
A0A6J1KBB93.1e-10293.81LIM domain-containing protein WLIM2a-like OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A6J1GYT74.1e-10294.33LIM domain-containing protein WLIM2b OS=Cucurbita moschata OX=3662 GN=LOC1114587... [more]
BLAST of Chy10G176500 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004150238.14.55e-14198.97LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_031741833.1 LIM domai... [more]
XP_008463203.18.82e-13997.44PREDICTED: LIM domain-containing protein WLIM2b-like [Cucumis melo] >XP_00846320... [more]
XP_038891809.11.03e-13796.41LIM domain-containing protein WLIM2b-like [Benincasa hispida] >XP_038891810.1 LI... [more]
XP_023549082.12.33e-13494.33LIM domain-containing protein WLIM2b-like [Cucurbita pepo subsp. pepo] >XP_02354... [more]
XP_022156896.14.71e-13494.33LIM domain-containing protein WLIM2b-like [Momordica charantia] >XP_022156897.1 ... [more]
BLAST of Chy10G176500 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G55770.13.0e-8980.11GATA type zinc finger transcription factor family protein [more]
AT3G55770.23.0e-8980.11GATA type zinc finger transcription factor family protein [more]
AT3G55770.33.0e-8980.11GATA type zinc finger transcription factor family protein [more]
AT3G55770.43.0e-8980.11GATA type zinc finger transcription factor family protein [more]
AT3G55770.53.0e-8980.11GATA type zinc finger transcription factor family protein [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001781Zinc finger, LIM-typeSMARTSM00132lim_4coord: 9..61
e-value: 2.7E-12
score: 56.9
coord: 107..159
e-value: 4.7E-12
score: 56.0
IPR001781Zinc finger, LIM-typePFAMPF00412LIMcoord: 10..65
e-value: 2.0E-11
score: 43.9
coord: 108..163
e-value: 1.4E-10
score: 41.3
IPR001781Zinc finger, LIM-typePROSITEPS00478LIM_DOMAIN_1coord: 10..44
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 106..166
score: 12.5434
IPR001781Zinc finger, LIM-typePROSITEPS50023LIM_DOMAIN_2coord: 8..68
score: 13.3552
NoneNo IPR availableGENE3D2.10.110.10Cysteine Rich Proteincoord: 102..172
e-value: 1.1E-19
score: 72.3
coord: 4..74
e-value: 2.3E-20
score: 74.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 77..98
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 176..195
NoneNo IPR availablePANTHERPTHR24206OS06G0237300 PROTEINcoord: 1..186
NoneNo IPR availablePANTHERPTHR24206:SF94LIM DOMAIN-CONTAINING PROTEIN WLIM2Bcoord: 1..186
NoneNo IPR availableCDDcd09441LIM2_SF3coord: 108..168
e-value: 1.38831E-35
score: 117.571
NoneNo IPR availableCDDcd09440LIM1_SF3coord: 6..68
e-value: 1.35429E-41
score: 132.974
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 100..133
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 36..76
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 3..35
NoneNo IPR availableSUPERFAMILY57716Glucocorticoid receptor-like (DNA-binding domain)coord: 134..173

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Chy10G176500.1Chy10G176500.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051017 actin filament bundle assembly
cellular_component GO:0015629 actin cytoskeleton
cellular_component GO:0005886 plasma membrane
molecular_function GO:0051015 actin filament binding
molecular_function GO:0046872 metal ion binding