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Chy10G174590 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGCATATATGAAAGCTTTGGATATTTGGAAAGCAGTGGAAGAGGATTATGAAATTTTTGCTCTTCCAGACAATCCTACCATGGCGCAAATCAAAGCACAAAAGGAGAAGACAAAGAAATCCAAGGCAAAGGTATGTTTGTTCGTTGCAGCTCATCTACTATTTTCACTCAAATTATGACTTTGAGATCAGCATATGATATGGAATTATCTCAAGTCAGAGTATGAGGAAAATGAAAAAATCAAATGAATGTGTGTGCTAAACTTGATTCGAGAATTCGAGTTGCAGAAGATGATGGAAACATAATCAATTAAAGAATATTCTGTTAGGTTATTGAACATTACAAACCAAATCAGATTTCTTGGTTCTGAGTTCAAGGACTCAAGAATTGTTGAAAAAATTCTTGTATCAGTGCTTGAAAAATTTGAGGCATCTATTTCTGCCTTAGAAAGTACCAAAGATTTGACTCAAATCACTTTTGCAAAGATACTCAATGCTTTGCAAGCGCAAGAACAAAGAAGAGCCATGAGGCAAGAAGGTGCTGTTGAAGGAGCCTTGCCAGCGAAGCATCATGAGAACGTTAGGAACAATAAGAAGAAGAAGTTTTTCAAGAAGAATCAAATTTCTACAAGAGAATCTTCAACTTACAATAAAGTAGGAGTCAAGAAGGGATCCTACCCTCCATGTCCACATTGCAATATATAG ATGGAGGCATATATGAAAGCTTTGGATATTTGGAAAGCAGTGGAAGAGGATTATGAAATTTTTGCTCTTCCAGACAATCCTACCATGGCGCAAATCAAAGCACAAAAGGAGAAGACAAAGAAATCCAAGGCAAAGAACAAAGAAGAGCCATGAGGCAAGAAGGTGCTGTTGAAGGAGCCTTGCCAGCGAAGCATCATGAGAACGTTAGGAACAATAAGAAGAAGAAGTTTTTCAAGAAGAATCAAATTTCTACAAGAGAATCTTCAACTTACAATAAAGTAGGAGTCAAGAAGGGATCCTACCCTCCATGTCCACATTGCAATATATAG ATGGAGGCATATATGAAAGCTTTGGATATTTGGAAAGCAGTGGAAGAGGATTATGAAATTTTTGCTCTTCCAGACAATCCTACCATGGCGCAAATCAAAGCACAAAAGGAGAAGACAAAGAAATCCAAGGCAAAGAACAAAGAAGAGCCATGAGGCAAGAAGGTGCTGTTGAAGGAGCCTTGCCAGCGAAGCATCATGAGAACGTTAGGAACAATAAGAAGAAGAAGTTTTTCAAGAAGAATCAAATTTCTACAAGAGAATCTTCAACTTACAATAAAGTAGGAGTCAAGAAGGGATCCTACCCTCCATGTCCACATTGCAATATATAG MEAYMKALDIWKAVEEDYEIFALPDNPTMAQIKAQKEKTKKSKAKNKEEP*GKKVLLKEPCQRSIMRTLGTIRRRSFSRRIKFLQENLQLTIK*ESRRDPTLHVHIAIYX Homology
BLAST of Chy10G174590 vs. ExPASy TrEMBL
Match: A0A5A7T316 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold494G00040 PE=4 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 4.9e-12 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0
BLAST of Chy10G174590 vs. ExPASy TrEMBL
Match: A0A5D3E2V7 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00370 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.4e-11 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0
BLAST of Chy10G174590 vs. ExPASy TrEMBL
Match: A0A5D3DMJ1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold110G00670 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.4e-11 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0
BLAST of Chy10G174590 vs. ExPASy TrEMBL
Match: A0A5D3BL45 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold360G00490 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.4e-11 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0
BLAST of Chy10G174590 vs. ExPASy TrEMBL
Match: A0A5D3DBU0 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold392G00950 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.4e-11 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0
BLAST of Chy10G174590 vs. NCBI nr
Match: KAA0038193.1 (uncharacterized protein E6C27_scaffold270G00260 [Cucumis melo var. makuwa]) HSP 1 Score: 78.6 bits (192), Expect = 2.29e-16 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0
BLAST of Chy10G174590 vs. NCBI nr
Match: KAA0045175.1 (uncharacterized protein E6C27_scaffold30G001760 [Cucumis melo var. makuwa]) HSP 1 Score: 77.0 bits (188), Expect = 1.20e-15 Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0
BLAST of Chy10G174590 vs. NCBI nr
Match: KAA0036682.1 (uncharacterized protein E6C27_scaffold510G00270 [Cucumis melo var. makuwa] >TYK03658.1 uncharacterized protein E5676_scaffold863G00120 [Cucumis melo var. makuwa]) HSP 1 Score: 74.7 bits (182), Expect = 8.51e-15 Identity = 41/46 (89.13%), Postives = 43/46 (93.48%), Query Frame = 0
BLAST of Chy10G174590 vs. NCBI nr
Match: KAA0059855.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 78.6 bits (192), Expect = 9.23e-15 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0
BLAST of Chy10G174590 vs. NCBI nr
Match: KAA0036011.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]) HSP 1 Score: 80.1 bits (196), Expect = 9.34e-15 Identity = 42/46 (91.30%), Postives = 44/46 (95.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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