Chy10G174200 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAGCGACGATGGTTTTCTGAACAACTCCGGAAACGAGTCGCCATGGTCCAGCGGCCTCTGTGATTGCTTCTCCGACATGGGATCATGTAAATTCCCTCTCTCTGTTCTCTCTCTTCTTGTTATTTCTATCTATTATTAACATGTTTTTACTTTGTTGTTGGGTGTTTTTGAATCATTTCTTTGAGATGTATTGCATCATATCTCAAAACCAATGAACAATAAGAAGAAATAGACTTGTGTATAATCAAATATTTGCTTGAGCTACGTTTGCAAGGTAGGTGATTATTGATTGATTGACGTCTTTTTTGAGCTCAAATCGTGTATTGTCTGTCAATACTTGTCAATTCTGATGAAGGTAGCAATAACAATTAGCCAATTAACCAACTAGTCGATTATTGTTGGTATTGTATGTGGGATAAGTTGATGAGGAAAAAACAAGAGAACAAACAAAAAGATGAGAGCTGGAGTTTGTATATTTAGAGGAACTAGAAAAAAGATTAAAAAGAAGTAGTTAGGGTCAATGAGAAGAAGAAAATAGAAGGGAAAGAAAGAAGGAATAATTAGGAGAAGAAATAAAAGAAAAAGAAAAAGAAATTGGCGGGAAAATAAAGAAAATAGTAGAGAGAAAGAAAAATGAAAATGAAAGAAAGAAAGATCGAAAAGCAGAACGAAAGGAAAAGGAGAGAAATTAATAAACGGGAAAAATAAATTAGAAAATAAAAGGTTTGAAAATGGAGAAGGGGAATGGAAAAGATAAAATAAAATAAAATGATTTGTTTTAAGAAAAGGCAAAGATACTTCCAAGTGATTGACCATATGGTGGCTAAATATTAGAAGTATATTTATTTCATTTGGATGCTTTCTTTGTAATTCCCCCAACTTTATGCTCTAATGTATAATTTTAACTATTTTTTTTCTTTCATGATATTAGGTTGCTGTACAGCATGGTGTCCATGTGTGCCATTTGGGCAAGCCTCAGAGATCATAGATGAAGGATCAACTTGTATGCTTTTATTTTAAACAATTTTTTAACCAACTTGTATACTAAACCTACTATTTAACAAAATTATAAACATACATAATATTCTAAACATTTTATAAGGATAAAGAAATTCTAAACCAAATATTTATTTCTTTTCTCTTTTTTTTTTTTAAATTACAAATTTAAACTCGTGTTTATTTGATAAAAATGGCTTAAACTTTTAATTTTATTTATAATATGTCTAATATAAGATCTCTAAAATTTTAATTTCATGTCTAATATATTCCTTAAGAGTCATTTTAATAATTGATTATTGATTAATGGTTTTTTTTTTATAAGAATAGGTTTCTATTTAATTTGTAATTTTTTTTCTGTTTTTTAATTTTAAAACGTTTTGAAAATATAAATTTTAAAAACGGTAAAATTGATTTCGAAATTCGTACTAAAAAACAATAATTTTAAATTTTAATTTTCTCCCTCCTTTATCACATTTTCCTATTTTTTCATTTGTTAAATAAAATTAAAAGGTAAATTAACCAACATTGAAAATATCTTTTTTACCCTTCAATTCTAAATCCATTATCTCTTATTTTATTTTCTATTTCATAATAAAATCTATCTTTTTTTAATAAAATTAAAAATAAAATTGAAAGGTGAATGCTAGGGTTGTTTTCAAATATAATAAAATGTCCTAAAATATTTAAAAATTTCAAATTTTCCGAGTCTTACTCTTTACAGGTAAAATAATTACCAATCAACAAAACTTTAGTTTTTGATGTAGAAAAGTGTGTGTTTGTTTTCATAGTTCTAGCTTAATTTTCAAAAATAAAAAATCGGGGAAGTGAAGTGAATTCTTATTAAACATAGAATGAGGTATATGTTAGGATTTGGAATTGAAAATGACGACATATGTAATTGTTTATGTGTTGTGGATGCAGCTTGTTTTGGTAACGGATTAATCTTTTGTCTAATTGCTACCTTTACACCCTGCATTTGTCTTTACACTTGTTCGTATCGATCTCGATTGAGGAGAAAATACAACCTTAAAGAAACACCATGCAACGATTGTTGTGTTCATTGTTGGTGTTGGAGTTGTGCTATGTGTCAAGAGTATCGTGAGCTTCAAAACCGAGGTTTCAACATGCATATCGGTATTTTCTCTACTCTCTTTTACATGTGTGATTTTTTTAAAAAAAACATGATCATATATTGATCGAGTGTTATACGCTTAGGTTGGCAAGAAAATGTGCAGAGAGGAAACAAGGGAATAGAGATCCCACCTACTGTCCCGGGACAAATGAAACGTTGA ATGGGCAGCGACGATGGTTTTCTGAACAACTCCGGAAACGAGTCGCCATGGTCCAGCGGCCTCTGTGATTGCTTCTCCGACATGGGATCATGTTGCTGTACAGCATGGTGTCCATGTGTGCCATTTGGGCAAGCCTCAGAGATCATAGATGAAGGATCAACTTCTTGTTTTGGTAACGGATTAATCTTTTGTCTAATTGCTACCTTTACACCCTGCATTTGTCTTTACACTTGTTCGTATCGATCTCGATTGAGGAGAAAATACAACCTTAAAGAAACACCATGCAACGATTGTTGTGTTCATTGTTGGTGTTGGAGTTGTGCTATGTGTCAAGAGTATCGTGAGCTTCAAAACCGAGGTTTCAACATGCATATCGGTTGGCAAGAAAATGTGCAGAGAGGAAACAAGGGAATAGAGATCCCACCTACTGTCCCGGGACAAATGAAACGTTGA ATGGGCAGCGACGATGGTTTTCTGAACAACTCCGGAAACGAGTCGCCATGGTCCAGCGGCCTCTGTGATTGCTTCTCCGACATGGGATCATGTTGCTGTACAGCATGGTGTCCATGTGTGCCATTTGGGCAAGCCTCAGAGATCATAGATGAAGGATCAACTTCTTGTTTTGGTAACGGATTAATCTTTTGTCTAATTGCTACCTTTACACCCTGCATTTGTCTTTACACTTGTTCGTATCGATCTCGATTGAGGAGAAAATACAACCTTAAAGAAACACCATGCAACGATTGTTGTGTTCATTGTTGGTGTTGGAGTTGTGCTATGTGTCAAGAGTATCGTGAGCTTCAAAACCGAGGTTTCAACATGCATATCGGTTGGCAAGAAAATGTGCAGAGAGGAAACAAGGGAATAGAGATCCCACCTACTGTCCCGGGACAAATGAAACGTTGA MGSDDGFLNNSGNESPWSSGLCDCFSDMGSCCCTAWCPCVPFGQASEIIDEGSTSCFGNGLIFCLIATFTPCICLYTCSYRSRLRRKYNLKETPCNDCCVHCWCWSCAMCQEYRELQNRGFNMHIGWQENVQRGNKGIEIPPTVPGQMKR* Homology
BLAST of Chy10G174200 vs. ExPASy Swiss-Prot
Match: B6TYV8 (Cell number regulator 2 OS=Zea mays OX=4577 GN=CNR2 PE=2 SV=1) HSP 1 Score: 167.9 bits (424), Expect = 8.6e-41 Identity = 70/135 (51.85%), Postives = 95/135 (70.37%), Query Frame = 0
BLAST of Chy10G174200 vs. ExPASy Swiss-Prot
Match: Q9LQU4 (Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=PCR2 PE=1 SV=1) HSP 1 Score: 153.3 bits (386), Expect = 2.2e-36 Identity = 62/120 (51.67%), Postives = 84/120 (70.00%), Query Frame = 0
BLAST of Chy10G174200 vs. ExPASy Swiss-Prot
Match: D9HP25 (Cell number regulator 9 OS=Zea mays OX=4577 GN=CNR9 PE=2 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 4.1e-35 Identity = 67/135 (49.63%), Postives = 86/135 (63.70%), Query Frame = 0
BLAST of Chy10G174200 vs. ExPASy Swiss-Prot
Match: D9HP26 (Cell number regulator 10 OS=Zea mays OX=4577 GN=CNR10 PE=2 SV=1) HSP 1 Score: 148.3 bits (373), Expect = 7.1e-35 Identity = 63/132 (47.73%), Postives = 87/132 (65.91%), Query Frame = 0
BLAST of Chy10G174200 vs. ExPASy Swiss-Prot
Match: D9HP23 (Cell number regulator 7 OS=Zea mays OX=4577 GN=CNR7 PE=2 SV=1) HSP 1 Score: 147.9 bits (372), Expect = 9.2e-35 Identity = 68/140 (48.57%), Postives = 89/140 (63.57%), Query Frame = 0
BLAST of Chy10G174200 vs. ExPASy TrEMBL
Match: A0A0A0KIS6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G027940 PE=4 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 1.0e-89 Identity = 148/150 (98.67%), Postives = 150/150 (100.00%), Query Frame = 0
BLAST of Chy10G174200 vs. ExPASy TrEMBL
Match: A0A1S3CM72 (cell number regulator 2-like OS=Cucumis melo OX=3656 GN=LOC103502518 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 7.0e-86 Identity = 143/150 (95.33%), Postives = 145/150 (96.67%), Query Frame = 0
BLAST of Chy10G174200 vs. ExPASy TrEMBL
Match: A0A1S3BT42 (cell number regulator 2-like OS=Cucumis melo OX=3656 GN=LOC103493439 PE=4 SV=1) HSP 1 Score: 283.1 bits (723), Expect = 6.8e-73 Identity = 125/150 (83.33%), Postives = 133/150 (88.67%), Query Frame = 0
BLAST of Chy10G174200 vs. ExPASy TrEMBL
Match: A0A4Y5UXT8 (Lsfw2.2 protein OS=Lagenaria siceraria OX=3668 PE=2 SV=1) HSP 1 Score: 282.3 bits (721), Expect = 1.2e-72 Identity = 126/150 (84.00%), Postives = 132/150 (88.00%), Query Frame = 0
BLAST of Chy10G174200 vs. ExPASy TrEMBL
Match: A0A4Y5UYC6 (Lsfw2.2 protein OS=Lagenaria siceraria OX=3668 PE=2 SV=1) HSP 1 Score: 262.3 bits (669), Expect = 1.2e-66 Identity = 113/139 (81.29%), Postives = 125/139 (89.93%), Query Frame = 0
BLAST of Chy10G174200 vs. NCBI nr
Match: XP_004142270.1 (cell number regulator 2 [Cucumis sativus] >KGN49620.1 hypothetical protein Csa_018338 [Cucumis sativus]) HSP 1 Score: 341 bits (874), Expect = 9.08e-119 Identity = 148/150 (98.67%), Postives = 150/150 (100.00%), Query Frame = 0
BLAST of Chy10G174200 vs. NCBI nr
Match: XP_008464696.1 (PREDICTED: cell number regulator 2-like [Cucumis melo]) HSP 1 Score: 328 bits (841), Expect = 9.84e-114 Identity = 143/150 (95.33%), Postives = 145/150 (96.67%), Query Frame = 0
BLAST of Chy10G174200 vs. NCBI nr
Match: XP_038892870.1 (cell number regulator 2-like [Benincasa hispida]) HSP 1 Score: 290 bits (741), Expect = 1.76e-98 Identity = 127/150 (84.67%), Postives = 134/150 (89.33%), Query Frame = 0
BLAST of Chy10G174200 vs. NCBI nr
Match: XP_008452392.1 (PREDICTED: cell number regulator 2-like [Cucumis melo]) HSP 1 Score: 285 bits (729), Expect = 1.19e-96 Identity = 125/150 (83.33%), Postives = 133/150 (88.67%), Query Frame = 0
BLAST of Chy10G174200 vs. NCBI nr
Match: QDD67543.1 (Lsfw2.2 protein [Lagenaria siceraria]) HSP 1 Score: 284 bits (727), Expect = 2.41e-96 Identity = 126/150 (84.00%), Postives = 132/150 (88.00%), Query Frame = 0
BLAST of Chy10G174200 vs. TAIR 10
Match: AT1G14870.1 (PLANT CADMIUM RESISTANCE 2 ) HSP 1 Score: 153.3 bits (386), Expect = 1.6e-37 Identity = 62/120 (51.67%), Postives = 84/120 (70.00%), Query Frame = 0
BLAST of Chy10G174200 vs. TAIR 10
Match: AT5G35525.1 (PLAC8 family protein ) HSP 1 Score: 146.4 bits (368), Expect = 1.9e-35 Identity = 67/144 (46.53%), Postives = 91/144 (63.19%), Query Frame = 0
BLAST of Chy10G174200 vs. TAIR 10
Match: AT1G68610.1 (PLANT CADMIUM RESISTANCE 11 ) HSP 1 Score: 145.2 bits (365), Expect = 4.3e-35 Identity = 69/150 (46.00%), Postives = 95/150 (63.33%), Query Frame = 0
BLAST of Chy10G174200 vs. TAIR 10
Match: AT1G14880.1 (PLANT CADMIUM RESISTANCE 1 ) HSP 1 Score: 135.6 bits (340), Expect = 3.4e-32 Identity = 62/140 (44.29%), Postives = 84/140 (60.00%), Query Frame = 0
BLAST of Chy10G174200 vs. TAIR 10
Match: AT1G49030.1 (PLAC8 family protein ) HSP 1 Score: 125.2 bits (313), Expect = 4.6e-29 Identity = 59/123 (47.97%), Postives = 79/123 (64.23%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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