Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAACAAACTTCCACAAAACCCCAATCCTTCACTCAAATTCTCTTACAAATCTCTTCCCAATATTTCCCAGCAATCCAAACGCATCTCTCACCAACATCCCTTTCTCTTTCCCAATCCACAAATCACCCAATTTCAAAACTTGTCTCCCTCGCCCTGGCCACAATGGTTGCGCTGCTCGGCGGAGAGTTCGTTACGAGGACGATGATGATGAAGATGAAGATTACGGCCACAACGATCACATTGCACTGTTGGAATCCTACACTCAGGCCGCCACAGGAGAGGCGCTCATCGTTCATGCCATGGTTGACGGTGACCATGTTGAAGTTCTTGTCTTCAAGGTTTTTCCTCTTTTCTGTTCAGAGATTTATTCTTTTGGTTAAATAATTATAATCTTTACCTTATAAAAATGTTAACGTTGGGTCTAATTTTAATCCATATGATTTAGTTGAAAATTAATTTGAGCTACATAGACTCTTTTTTTTTTTTCCTTCCAAATCCGCCTGGGCTGGTTCAGTTCTTGGCTCAGAAATAGGATATGTAAATATATTTTGAAAATTTATTATAAAAAGTAATATTTAGTAGATAAAAGAAAAAGAAGAGTTGTTAAAAACTGAAAAAGAATATAAACGGAGTAATTTAGATATATTGAAAATGGAGAGATGAAAATATTTGAAGTAAAATGATAAGAAAATGTGTGGAATGATTAATATTATATTTGTAGGGATTCTCATCATGTTTGAGCTATGGGACATCACCTGATCCATCAAAAAGTGTTATTCCTGAAAGAGCAATCATTAAATTCATTGATAGAATCAAAGGCCCATTTGATCCATCAAATATCCAATACATTCAGAAGGGTATCACTTGGAATTCATTTAACTTCCTTAATTAG
mRNA sequence
ATGGCAACAAACTTCCACAAAACCCCAATCCTTCACTCAAATTCTCTTACAAATCTCTTCCCAATATTTCCCAGCAATCCAAACGCATCTCTCACCAACATCCCTTTCTCTTTCCCAATCCACAAATCACCCAATTTCAAAACTTGTCTCCCTCGCCCTGGCCACAATGGTTGCGCTGCTCGGCGGAGAGTTCGTTACGAGGACGATGATGATGAAGATGAAGATTACGGCCACAACGATCACATTGCACTGTTGGAATCCTACACTCAGGCCGCCACAGGAGAGGCGCTCATCGTTCATGCCATGGTTGACGGTGACCATGTTGAAGTTCTTGTCTTCAAGGGATTCTCATCATGTTTGAGCTATGGGACATCACCTGATCCATCAAAAAGTGTTATTCCTGAAAGAGCAATCATTAAATTCATTGATAGAATCAAAGGCCCATTTGATCCATCAAATATCCAATACATTCAGAAGGGTATCACTTGGAATTCATTTAACTTCCTTAATTAG
Coding sequence (CDS)
ATGGCAACAAACTTCCACAAAACCCCAATCCTTCACTCAAATTCTCTTACAAATCTCTTCCCAATATTTCCCAGCAATCCAAACGCATCTCTCACCAACATCCCTTTCTCTTTCCCAATCCACAAATCACCCAATTTCAAAACTTGTCTCCCTCGCCCTGGCCACAATGGTTGCGCTGCTCGGCGGAGAGTTCGTTACGAGGACGATGATGATGAAGATGAAGATTACGGCCACAACGATCACATTGCACTGTTGGAATCCTACACTCAGGCCGCCACAGGAGAGGCGCTCATCGTTCATGCCATGGTTGACGGTGACCATGTTGAAGTTCTTGTCTTCAAGGGATTCTCATCATGTTTGAGCTATGGGACATCACCTGATCCATCAAAAAGTGTTATTCCTGAAAGAGCAATCATTAAATTCATTGATAGAATCAAAGGCCCATTTGATCCATCAAATATCCAATACATTCAGAAGGGTATCACTTGGAATTCATTTAACTTCCTTAATTAG
Protein sequence
MATNFHKTPILHSNSLTNLFPIFPSNPNASLTNIPFSFPIHKSPNFKTCLPRPGHNGCAARRRVRYEDDDDEDEDYGHNDHIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSSCLSYGTSPDPSKSVIPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN*
Homology
BLAST of Chy10G174000 vs. ExPASy TrEMBL
Match:
A0A5A7UTE4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold486G001040 PE=4 SV=1)
HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 152/168 (90.48%), Postives = 159/168 (94.64%), Query Frame = 0
Query: 1 MATNFHKTPILHSNSLTNLFPIFPSNPNASLTNIPFSFPIHKSPNFKTCLPRPGHNGCAA 60
MATN HKTPILHSNSLTNLFP FPSNPN SLTNIPFSFPIHKSPNFKTC+ PGH GCAA
Sbjct: 1 MATNLHKTPILHSNSLTNLFP-FPSNPNTSLTNIPFSFPIHKSPNFKTCVRGPGHKGCAA 60
Query: 61 RRRVRYEDDDDEDEDYGHNDHIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSSCL 120
RRRVRY+DD+DEDEDYGHND IALLESYTQAATGEALIVHAMVDG+HVEVLVFKGFSSCL
Sbjct: 61 RRRVRYDDDEDEDEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCL 120
Query: 121 SYGTSPDPSKSVIPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF 169
SYGTSPDPS+SV+PERA IK IDRIKGPFDPSNIQYI+KGITWNSFNF
Sbjct: 121 SYGTSPDPSRSVVPERATIKSIDRIKGPFDPSNIQYIEKGITWNSFNF 167
BLAST of Chy10G174000 vs. ExPASy TrEMBL
Match:
A0A1S3BTQ8 (uncharacterized protein LOC103493452 OS=Cucumis melo OX=3656 GN=LOC103493452 PE=4 SV=1)
HSP 1 Score: 318.9 bits (816), Expect = 1.3e-83
Identity = 152/168 (90.48%), Postives = 159/168 (94.64%), Query Frame = 0
Query: 1 MATNFHKTPILHSNSLTNLFPIFPSNPNASLTNIPFSFPIHKSPNFKTCLPRPGHNGCAA 60
MATN HKTPILHSNSLTNLFP FPSNPN SLTNIPFSFPIHKSPNFKTC+ PGH GCAA
Sbjct: 1 MATNLHKTPILHSNSLTNLFP-FPSNPNTSLTNIPFSFPIHKSPNFKTCVRGPGHKGCAA 60
Query: 61 RRRVRYEDDDDEDEDYGHNDHIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSSCL 120
RRRVRY+DD+DEDEDYGHND IALLESYTQAATGEALIVHAMVDG+HVEVLVFKGFSSCL
Sbjct: 61 RRRVRYDDDEDEDEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCL 120
Query: 121 SYGTSPDPSKSVIPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF 169
SYGTSPDPS+SV+PERA IK IDRIKGPFDPSNIQYI+KGITWNSFNF
Sbjct: 121 SYGTSPDPSRSVVPERATIKSIDRIKGPFDPSNIQYIEKGITWNSFNF 167
BLAST of Chy10G174000 vs. ExPASy TrEMBL
Match:
A0A0A0KJ82 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G021310 PE=4 SV=1)
HSP 1 Score: 316.6 bits (810), Expect = 6.3e-83
Identity = 157/172 (91.28%), Postives = 160/172 (93.02%), Query Frame = 0
Query: 1 MATNFHKTPILHSNSLTNLFPIFPSNPNASLTNIPFSFP-IHKSPNFKTCLPRPGHNGCA 60
MATNFHKTPILHS SLTNLFPI PSNP SLTN PFSFP IHKSPNFKTCLPRPG N CA
Sbjct: 1 MATNFHKTPILHSISLTNLFPILPSNPKPSLTNTPFSFPLIHKSPNFKTCLPRPGPNRCA 60
Query: 61 ARRRVRYEDDD-DEDEDYGHNDHIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSS 120
ARRRVRY+DDD DEDEDYGHN IALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSS
Sbjct: 61 ARRRVRYDDDDEDEDEDYGHNHQIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSS 120
Query: 121 CLSYGTSPDPSKSVIPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN 171
LSYGTSPDPS+SV+PERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN
Sbjct: 121 SLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN 172
BLAST of Chy10G174000 vs. ExPASy TrEMBL
Match:
A0A6J1JCS8 (uncharacterized protein LOC111483247 OS=Cucurbita maxima OX=3661 GN=LOC111483247 PE=4 SV=1)
HSP 1 Score: 217.6 bits (553), Expect = 4.0e-53
Identity = 112/170 (65.88%), Postives = 131/170 (77.06%), Query Frame = 0
Query: 1 MATNFHKTPILHSNSLTNLFPIFPSNPNASLTNI--PFSFPIHKSPNFKTCLPRPGHNGC 60
MA + +PILHS+SL + F + N + T I FSF IH S NF+ R N C
Sbjct: 1 MANHLQTSPILHSDSLPTVLRPFSGDLNTTPTKISFSFSFTIHDSLNFRP-RRRQRPNDC 60
Query: 61 AARRRVRYEDDDDEDEDYGHNDHIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSS 120
AARRRVRY+D++DEDE+YGHN+ I+LLESYTQAA GEALIVHA +DGD VEVLVFKGFSS
Sbjct: 61 AARRRVRYDDEEDEDEEYGHNEQISLLESYTQAAAGEALIVHAALDGDLVEVLVFKGFSS 120
Query: 121 CLSYGTSPDPSKSVIPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF 169
CLSY TS DPS+SV+P RA I+ IDRIKGPFDPSNI+YIQKG+TW SFNF
Sbjct: 121 CLSYATSSDPSRSVLPARATIQSIDRIKGPFDPSNIEYIQKGVTWESFNF 169
BLAST of Chy10G174000 vs. ExPASy TrEMBL
Match:
A0A6J1FWQ3 (uncharacterized protein LOC111447634 OS=Cucurbita moschata OX=3662 GN=LOC111447634 PE=4 SV=1)
HSP 1 Score: 217.2 bits (552), Expect = 5.2e-53
Identity = 111/170 (65.29%), Postives = 130/170 (76.47%), Query Frame = 0
Query: 1 MATNFHKTPILHSNSLTNLFPIFPSNPNASLTNI--PFSFPIHKSPNFKTCLPRPGHNGC 60
MA + +PILHS+SL + F + N + T I FSF IH S NF+ N C
Sbjct: 1 MANHLQTSPILHSDSLPTVLRPFSGDLNTTPTKITFSFSFTIHDSLNFRARRRPQRLNDC 60
Query: 61 AARRRVRYEDDDDEDEDYGHNDHIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSS 120
AARRRVRY+D++DEDE+YGHN+ IALLESYTQAA GEALIVHA +DGD VEVLVFKGFSS
Sbjct: 61 AARRRVRYDDEEDEDEEYGHNEQIALLESYTQAAAGEALIVHAALDGDLVEVLVFKGFSS 120
Query: 121 CLSYGTSPDPSKSVIPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF 169
CLS+ TS DPS+SV+P RA I+ IDRIKGPFDPSNI+YIQ+GITW SFNF
Sbjct: 121 CLSFATSSDPSRSVLPARATIQSIDRIKGPFDPSNIEYIQRGITWESFNF 170
BLAST of Chy10G174000 vs. NCBI nr
Match:
XP_008452414.1 (PREDICTED: uncharacterized protein LOC103493452 [Cucumis melo] >KAA0056805.1 uncharacterized protein E6C27_scaffold486G001040 [Cucumis melo var. makuwa])
HSP 1 Score: 318 bits (814), Expect = 5.68e-109
Identity = 152/168 (90.48%), Postives = 159/168 (94.64%), Query Frame = 0
Query: 1 MATNFHKTPILHSNSLTNLFPIFPSNPNASLTNIPFSFPIHKSPNFKTCLPRPGHNGCAA 60
MATN HKTPILHSNSLTNLFP FPSNPN SLTNIPFSFPIHKSPNFKTC+ PGH GCAA
Sbjct: 1 MATNLHKTPILHSNSLTNLFP-FPSNPNTSLTNIPFSFPIHKSPNFKTCVRGPGHKGCAA 60
Query: 61 RRRVRYEDDDDEDEDYGHNDHIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSSCL 120
RRRVRY+DD+DEDEDYGHND IALLESYTQAATGEALIVHAMVDG+HVEVLVFKGFSSCL
Sbjct: 61 RRRVRYDDDEDEDEDYGHNDQIALLESYTQAATGEALIVHAMVDGEHVEVLVFKGFSSCL 120
Query: 121 SYGTSPDPSKSVIPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF 168
SYGTSPDPS+SV+PERA IK IDRIKGPFDPSNIQYI+KGITWNSFNF
Sbjct: 121 SYGTSPDPSRSVVPERATIKSIDRIKGPFDPSNIQYIEKGITWNSFNF 167
BLAST of Chy10G174000 vs. NCBI nr
Match:
XP_004142303.2 (uncharacterized protein LOC101213440 [Cucumis sativus])
HSP 1 Score: 316 bits (809), Expect = 3.65e-108
Identity = 157/172 (91.28%), Postives = 160/172 (93.02%), Query Frame = 0
Query: 1 MATNFHKTPILHSNSLTNLFPIFPSNPNASLTNIPFSFP-IHKSPNFKTCLPRPGHNGCA 60
MATNFHKTPILHS SLTNLFPI PSNP SLTN PFSFP IHKSPNFKTCLPRPG N CA
Sbjct: 1 MATNFHKTPILHSISLTNLFPILPSNPKPSLTNTPFSFPLIHKSPNFKTCLPRPGPNRCA 60
Query: 61 ARRRVRYEDDD-DEDEDYGHNDHIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSS 120
ARRRVRY+DDD DEDEDYGHN IALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSS
Sbjct: 61 ARRRVRYDDDDEDEDEDYGHNHQIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSS 120
Query: 121 CLSYGTSPDPSKSVIPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN 170
LSYGTSPDPS+SV+PERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN
Sbjct: 121 SLSYGTSPDPSRSVLPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNFLN 172
BLAST of Chy10G174000 vs. NCBI nr
Match:
XP_038892698.1 (uncharacterized protein LOC120081685 [Benincasa hispida])
HSP 1 Score: 266 bits (681), Expect = 9.92e-89
Identity = 134/168 (79.76%), Postives = 145/168 (86.31%), Query Frame = 0
Query: 1 MATNFHKTPILHSNSLTNLFPIFPSNPNASLTNIPFSFPIHKSPNFKTCLPRPGHNGCAA 60
MAT+ K PILH SLT L+P FPSNPN SLT I SFPIHKS NF+T L R G NGCAA
Sbjct: 1 MATHLQKLPILHD-SLTILWP-FPSNPNTSLTKISLSFPIHKSLNFRTLLRR-GRNGCAA 60
Query: 61 RRRVRYEDDDDEDEDYGHNDHIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSSCL 120
RRRVRY++DDDEDEDYGHND IALLESYTQA GEALIVHA VDGDHVEVLVFKGFSSCL
Sbjct: 61 RRRVRYDEDDDEDEDYGHNDQIALLESYTQATAGEALIVHATVDGDHVEVLVFKGFSSCL 120
Query: 121 SYGTSPDPSKSVIPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF 168
SYGTSPDPS+SV+P RA+IK IDRIKGPFDPSNI+Y++KGITW SFNF
Sbjct: 121 SYGTSPDPSRSVLPARAVIKSIDRIKGPFDPSNIEYLEKGITWESFNF 165
BLAST of Chy10G174000 vs. NCBI nr
Match:
KAG6600851.1 (hypothetical protein SDJN03_06084, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 220 bits (561), Expect = 2.19e-70
Identity = 113/170 (66.47%), Postives = 131/170 (77.06%), Query Frame = 0
Query: 1 MATNFHKTPILHSNSLTNLFPIFPSNPNASLTNIPFSFP--IHKSPNFKTCLPRPGHNGC 60
MA + +PILHS+SL + F + N + T I FSF IH S NF+ R N C
Sbjct: 1 MANHLQTSPILHSDSLPTVLRPFSGDLNTTPTKITFSFSFTIHDSLNFRARRRRQRLNDC 60
Query: 61 AARRRVRYEDDDDEDEDYGHNDHIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSS 120
AARRRVRY+D++DEDE+YGHN+ IALLESYTQAA GEALIVHA +DGD VEVLVFKGFSS
Sbjct: 61 AARRRVRYDDEEDEDEEYGHNEQIALLESYTQAAAGEALIVHAALDGDLVEVLVFKGFSS 120
Query: 121 CLSYGTSPDPSKSVIPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF 168
CLSY TS DPS+SV+P RA I+ IDRIKGPFDPSNI+YIQ+GITW SFNF
Sbjct: 121 CLSYATSSDPSRSVLPARATIQSIDRIKGPFDPSNIEYIQRGITWESFNF 170
BLAST of Chy10G174000 vs. NCBI nr
Match:
KAG7031485.1 (hypothetical protein SDJN02_05525, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 219 bits (558), Expect = 6.27e-70
Identity = 112/170 (65.88%), Postives = 131/170 (77.06%), Query Frame = 0
Query: 1 MATNFHKTPILHSNSLTNLFPIFPSNPNASLTNIP--FSFPIHKSPNFKTCLPRPGHNGC 60
MA + +PILHS+SL + F + N + T I FSF IH S NF+ R N C
Sbjct: 1 MANHLQTSPILHSDSLPTVLRPFSGDLNTTPTKITSSFSFTIHDSLNFRARRRRQRLNDC 60
Query: 61 AARRRVRYEDDDDEDEDYGHNDHIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGFSS 120
AARRRVRY+D++DEDE+YGHN+ IALLESYTQAA GEALIVHA +DGD VEVLVFKGFSS
Sbjct: 61 AARRRVRYDDEEDEDEEYGHNEQIALLESYTQAAAGEALIVHAALDGDLVEVLVFKGFSS 120
Query: 121 CLSYGTSPDPSKSVIPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSFNF 168
CLSY TS DPS+SV+P RA I+ IDRIKGPFDPSNI+YI++GITW SFNF
Sbjct: 121 CLSYATSSDPSRSVLPARATIQSIDRIKGPFDPSNIEYIERGITWESFNF 170
BLAST of Chy10G174000 vs. TAIR 10
Match:
AT2G01755.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 120 Blast hits to 120 proteins in 52 species: Archae - 0; Bacteria - 80; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink). )
HSP 1 Score: 131.7 bits (330), Expect = 5.5e-31
Identity = 64/110 (58.18%), Postives = 86/110 (78.18%), Query Frame = 0
Query: 58 CAARRRVRYE-DDDDEDEDYGHNDHIALLESYTQAATGEALIVHAMVDGDHVEVLVFKGF 117
C ARRRVR E +DEDE YG+N+ +A+LE Y+Q+ EALIV A+VD + VEV++FKG
Sbjct: 58 CGARRRVRDEGGGEDEDEMYGYNEEMAMLEIYSQSCREEALIVTAIVDDEEVEVVIFKGV 117
Query: 118 SSCLSYGTSPDPSKSVIPERAIIKFIDRIKGPFDPSNIQYIQKGITWNSF 167
SSCLS T+ DP++SV+PERA+I IDR++GPFDPS I YIQ+ I++ +F
Sbjct: 118 SSCLSGETAVDPARSVLPERAVITKIDRVRGPFDPSQIHYIQRDISFQAF 167
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7UTE4 | 1.3e-83 | 90.48 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
A0A1S3BTQ8 | 1.3e-83 | 90.48 | uncharacterized protein LOC103493452 OS=Cucumis melo OX=3656 GN=LOC103493452 PE=... | [more] |
A0A0A0KJ82 | 6.3e-83 | 91.28 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G021310 PE=4 SV=1 | [more] |
A0A6J1JCS8 | 4.0e-53 | 65.88 | uncharacterized protein LOC111483247 OS=Cucurbita maxima OX=3661 GN=LOC111483247... | [more] |
A0A6J1FWQ3 | 5.2e-53 | 65.29 | uncharacterized protein LOC111447634 OS=Cucurbita moschata OX=3662 GN=LOC1114476... | [more] |
Match Name | E-value | Identity | Description | |
XP_008452414.1 | 5.68e-109 | 90.48 | PREDICTED: uncharacterized protein LOC103493452 [Cucumis melo] >KAA0056805.1 unc... | [more] |
XP_004142303.2 | 3.65e-108 | 91.28 | uncharacterized protein LOC101213440 [Cucumis sativus] | [more] |
XP_038892698.1 | 9.92e-89 | 79.76 | uncharacterized protein LOC120081685 [Benincasa hispida] | [more] |
KAG6600851.1 | 2.19e-70 | 66.47 | hypothetical protein SDJN03_06084, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7031485.1 | 6.27e-70 | 65.88 | hypothetical protein SDJN02_05525, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
Match Name | E-value | Identity | Description | |
AT2G01755.1 | 5.5e-31 | 58.18 | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... | [more] |