Chy10G173600 (gene) Cucumber (hystrix) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TAGAGATCGAACAACACAAGACTTCGTGATGTTGCAGATGATCCACAAAAAATCCTTGATATATGTAATAATAATGAGAGGTACATGGAGCAGATACATAATATGTACGATCTACCTATTGTACCTCTACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTTCCATAATGTGGAAGAAGTGCCTTCTATGACATAGACACAGAGCCAAACTGGTTATGGTACTCCAATGATGATGATGCCAACATTTGGAGCAGGATATTGTGATTCTAAGGTCGGCAGGAAATTATGATTCAAGGTCGGTCCATCATCTTCATACATGGATGTCGGTCCATCAACTTCTTACTTGCATGGACACAGACGTGGCCATGGAGAACATAACAAATATATGTATTATGAAGCAGTACTTGTAGAGGTATTAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGAGTCAGAACAACATAGAGTTCAGAGTCGACGACGACAACCAGCTCGAAATCGACGACGTCTGGGTTGTGGAACACATTGATATTTTTTAATCTTCTAAATAAATGTAATTTGGTTATTAAAAAATATTTTAATTTACACTTAATTTTTATTAATTATAGGTCATTATTAAAAAACGATTTAAAAATCATTTTGAATAATAAAAAATACAATTATAAATTTTCACAAAATTAGTGATATTAAGAAAATGAAGATGAAAATTTAAATTAATAGAAATTTAAATTTAAAACAAAAAAGAGAATACAATGTCTTGGATTGAACCCAAGACATAGGAGAGAGAGAAAAAACTACAATATTTATATAAATATTTTAATATCTACAATATTTCAATAATTATTTTTGAAAACTACATTATTTATCCAAATTTCCCCATATATACGATACATGAAATACACATTTTTCTTAAATTGATTTTATTAAATCTGATTAATTAGAATGTTCATTTAATAATTTTAGATTTAATGTAACGTGGATTCATACATATATATGATACAAATTTTATTTAGTGTAAAGATTTCTTTTTTCAAAACTAAAATACAAGTTAATAAAGAAAACTACTAATTGAATCGAAGTAAAAAATAACTAATATAAATGAAAAATAACTCCAAACACAAATCTTACTACATTTGAAGGGGCTTAAAAGTACATTTAAACTAGGTTAATTATCATAAATGTAAGGAAACACAAAAATATTTACGGCTCGTGTAACAAAAAGCAAAAGTCCATGAAGCCGATACAATATTTTCATAATTTTCAGATTTACCCTTGAATATTGCGGATGATTCGTCACTTTTCTTTTTTCTTCTTTTTATTTTTTTTAAATAATTTATTCTTTTGTTTAAATCTCCTATTTCATCTTCACCATTTTTTGTAAGATTCTTTGAAGTTTCTTTACCTTCCTCATGTTTGAGAATATCAAGATCGCTTAAATATCATTTTGACATGATCTAAACGATCGTTTACTATTGTCAACACGATCGTTTAAATTTGAAGTATATTCCCCATTGTTTAAAAATAACTACACGATCTTGTTGATATGATCTATACAATCATTTACCATAGTCAACACGATTGTTTAGCATGGTCAATGCGATCTTTTAGATTTGAAGCCTTTTCTCCATCGTTTAAAAAGAACTACACGGTCGTCTAGATATGATCTAAACGATCGCTTACCATAGTCATAACGATTGTTTAGCATGGTCAAAACGATCATAATTTAGATTTGAAATTTTTTTTTATCGTTTAAAAAGAACTACACAATCTTGTGGATATGAAAGATCACTTATCATAGTCAACACGACCGTTTAGCATAGTCAACATGATCTTTTAAAATTTAAGTCTTTTTTCCATCTTTAAAAAGAATTACATGATTGTGTATCATGACCTAAACAATTGTAGATCATTCGATTAGACTATAGTATACGATCATTTAGAAGGAAATTACTCACGTTGTTGACTGGAGTATTTTTGGTATTTCTCATTATGGACCTGTAGGTTTTTTCCGTTTTCAAAATTGTTCTATAGAGTGTAATTAATATTTTACTGGTCTGTTATCTTTAAAAAAAAACCCTTTAAACTAACTAATATGAACATAATTTAATGGTTAAAATGGTAATAAGGGTTAACGGTTCAAAATTTCAATTATCATTATTTAACCATGAGTGAATTTTCTTATGCATTTTACATTAATTCTTAGGGGAATTATTCTAAATGGTAAACTACTAAAAATATTTACAAAATATAGCAAAACTTCAAGTTGTATCAGTGAAAGACTTGGTAGATACTAATAATCTTCTACCGATGTTTATCATTTATAAGTTTTAAAATTTTGCTATATTTTATAAATATTTTGGTTCATTTGACTACATATAAAAATGTTCGTTGATTTGATCGCTTTTGTGTCCATATGAATTTTCATTTATTTATTTTTAAAATTAACTTAGCATTTCTAGAAATTGTTATCAA TAGAGATCGAACAACACAAGACTTCGTGATGTTGCAGATGATCCACAAAAAATCCTTGATATATGTAATAATAATGAGAGGTACATGGAGCAGATACATAATATGTACGATCTACCTATTGTACCTCTACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTTCCATAATGTGGAAGAAGTGCCTTCTATGACATAGACACAGAGCCAAACTGGTTATGGTACTCCAATGATGATGATGCCAACATTTGGAGCAGGATATTGTGATTCTAAGGTCGGCAGGAAATTATGATTCAAGGTCGGTCCATCATCTTCATACATGGATGTCGGTCCATCAACTTCTTACTTGCATGGACACAGACGTGGCCATGGAGAACATAACAAATATATGTATTATGAAGCAGTACTTAAATTGTTATCAA TAGAGATCGAACAACACAAGACTTCGTGATGTTGCAGATGATCCACAAAAAATCCTTGATATATGTAATAATAATGAGAGGTACATGGAGCAGATACATAATATGTACGATCTACCTATTGTACCTCTACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTTCCATAATGTGGAAGAAGTGCCTTCTATGACATAGACACAGAGCCAAACTGGTTATGGTACTCCAATGATGATGATGCCAACATTTGGAGCAGGATATTGTGATTCTAAGGTCGGCAGGAAATTATGATTCAAGGTCGGTCCATCATCTTCATACATGGATGTCGGTCCATCAACTTCTTACTTGCATGGACACAGACGTGGCCATGGAGAACATAACAAATATATGTATTATGAAGCAGTACTTAAATTGTTATCAA *RSNNTRLRDVADDPQKILDICNNNERYMEQIHNMYDLPIVPLPVHRGRVRVEEAELDEVFHNVEEVPSMT*TQSQTGYGTPMMMMPTFGAGYCDSKVGRKL*FKVGPSSSYMDVGPSTSYLHGHRRGHGEHNKYMYYEAVLKLLSX Homology
BLAST of Chy10G173600 vs. ExPASy TrEMBL
Match: A0A5A7VEC1 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold119G001470 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.7e-57 Identity = 110/141 (78.01%), Postives = 125/141 (88.65%), Query Frame = 0
BLAST of Chy10G173600 vs. ExPASy TrEMBL
Match: A0A5D3BSG8 (GATA zinc finger domain-containing protein 10-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2044G00130 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.3e-56 Identity = 110/140 (78.57%), Postives = 122/140 (87.14%), Query Frame = 0
BLAST of Chy10G173600 vs. ExPASy TrEMBL
Match: A0A5A7V342 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001560 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 1.6e-55 Identity = 109/140 (77.86%), Postives = 121/140 (86.43%), Query Frame = 0
BLAST of Chy10G173600 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1) HSP 1 Score: 224.6 bits (571), Expect = 2.8e-55 Identity = 107/140 (76.43%), Postives = 121/140 (86.43%), Query Frame = 0
BLAST of Chy10G173600 vs. ExPASy TrEMBL
Match: A0A5A7TBF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00270 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.5e-53 Identity = 104/136 (76.47%), Postives = 117/136 (86.03%), Query Frame = 0
BLAST of Chy10G173600 vs. NCBI nr
Match: KAA0064245.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa] >TYK18615.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 230 bits (587), Expect = 3.51e-74 Identity = 110/141 (78.01%), Postives = 125/141 (88.65%), Query Frame = 0
BLAST of Chy10G173600 vs. NCBI nr
Match: TYK01176.1 (GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]) HSP 1 Score: 226 bits (576), Expect = 1.55e-72 Identity = 110/140 (78.57%), Postives = 122/140 (87.14%), Query Frame = 0
BLAST of Chy10G173600 vs. NCBI nr
Match: KAA0062642.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 224 bits (570), Expect = 1.87e-71 Identity = 109/140 (77.86%), Postives = 121/140 (86.43%), Query Frame = 0
BLAST of Chy10G173600 vs. NCBI nr
Match: TYK11193.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 217 bits (553), Expect = 7.86e-68 Identity = 105/137 (76.64%), Postives = 118/137 (86.13%), Query Frame = 0
BLAST of Chy10G173600 vs. NCBI nr
Match: TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 223 bits (568), Expect = 9.43e-68 Identity = 107/140 (76.43%), Postives = 121/140 (86.43%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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