Chy10G173550 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G173550
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Mediator of RNA polymerase II transcription subunit 12-like isoform X1
Location	chrH10: 4143426 .. 4144133 (+)
RNA-Seq Expression	Chy10G173550
Synteny	Chy10G173550

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGCAAGAGGAGTTTTGATTAAGCAATTTGATATGAATGTGACTCAAGAATATATCCACTGGTATAATAATATAACGAGACTCTACATCACTCGACCAGGAGTAGCCGTGGGTGATCTGGTTCGTACATATTTAAATATTGAATAATTACTTAAATTATTTACTCAATTAAATATTTCTATTTTTGTTTACAATTTATAGAGATCGAACAACACAAGACTTCGTGATGTTGCAGATGATCCACAAAAAATCCTTGATATATGTAATAATAATGAGAGGTACATGGAGCAGATACATAATATGTACGATCTACCTATTGTACCTCTACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTTCCATAATGTGGAAGAAGTGCCTTCTATGACATAGACACAGAGCCAAACTGGTTATGGTACTCCAATGATGATGATGCCAACATTTGGAGCAGGATATTGTGATTCTAAGGTCGGCAGGAAATTATGATTCAAGGTCGGTCCATCATCTTCATACATGGATGTCGGTCCATCAACTTCTTACTTGCATGGACACAGACGTGGCCATGGAGAACATAACAAATATATGTATTATGAAGCAGTACTTGTAGAGGTATTAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGAGTCAGAACAACATAGAGTTCAGAGTCGACGA

mRNA sequence

AAGGCAAGAGGAGTTTTGATTAAGCAATTTGATATGAATGTGACTCAAGAATATATCCACTGGTATAATAATATAACGAGACTCTACATCACTCGACCAGGAGTAGCCGTGGGTGATCTGAGATCGAACAACACAAGACTTCGTGATGTTGCAGATGATCCACAAAAAATCCTTGATATATGTAATAATAATGAGAGGTACATGGAGCAGATACATAATATGTACGATCTACCTATTGTACCTCTACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTTCCATAATGTGGAAGAAGTGCCTTCTATGACATAGACACAGAGCCAAACTGGTTATGGTACTCCAATGATGATGATGCCAACATTTGGAGCAGGATATTGTGATTCTAAGGTCGGCAGGAAATTATGATTCAAGGTCGGTCCATCATCTTCATACATGGATGTCGGTCCATCAACTTCTTACTTGCATGGACACAGACGTGGCCATGGAGAACATAACAAATATATGTATTATGAAGCAGTACTTGTAGAGGTATTAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGAGTCAGAACAACATAGAGTTCAGAGTCGACGA

Coding sequence (CDS)

AAGGCAAGAGGAGTTTTGATTAAGCAATTTGATATGAATGTGACTCAAGAATATATCCACTGGTATAATAATATAACGAGACTCTACATCACTCGACCAGGAGTAGCCGTGGGTGATCTGAGATCGAACAACACAAGACTTCGTGATGTTGCAGATGATCCACAAAAAATCCTTGATATATGTAATAATAATGAGAGGTACATGGAGCAGATACATAATATGTACGATCTACCTATTGTACCTCTACCAGTTCATAGGGGACGTGTTCGAGTGGAAGAAGCTGAACTCGATGAAGTTTTCCATAATGTGGAAGAAGTGCCTTCTATGACATAGACACAGAGCCAAACTGGTTATGGTACTCCAATGATGATGATGCCAACATTTGGAGCAGGATATTGTGATTCTAAGGTCGGCAGGAAATTATGATTCAAGGTCGGTCCATCATCTTCATACATGGATGTCGGTCCATCAACTTCTTACTTGCATGGACACAGACGTGGCCATGGAGAACATAACAAATATATGTATTATGAAGCAGTACTTGTAGAGGTATTAGATCGACAAGAGTACCAACAAGAACCAGAGAACCAAGAGGAGTCAGAACAACATAGAGTTCAGAGTCGACGA

Protein sequence

KARGVLIKQFDMNVTQEYIHWYNNITRLYITRPGVAVGDLRSNNTRLRDVADDPQKILDICNNNERYMEQIHNMYDLPIVPLPVHRGRVRVEEAELDEVFHNVEEVPSMT*TQSQTGYGTPMMMMPTFGAGYCDSKVGRKL*FKVGPSSSYMDVGPSTSYLHGHRRGHGEHNKYMYYEAVLVEVLDRQEYQQEPENQEESEQHRVQSRR

Homology

[Close]

BLAST of Chy10G173550 vs. ExPASy TrEMBL
Match: A0A5D3DJV7 (Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold419G00060 PE=4 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 2.9e-82
Identity = 158/206 (76.70%), Postives = 177/206 (85.92%), Query Frame = 0


Query: 5   VLIKQFDMNVTQEYIHWYNNITRLYITRPGVAVGDLRSNNTRLRDVADDPQKILDICNNN 64
           V I+QFDM+VTQEYIH YNNITRLYITRPG  VG LRSNN RLRDV +DPQ++LDICNNN
Sbjct: 281 VSIQQFDMDVTQEYIHLYNNITRLYITRPGAIVGHLRSNNARLRDVVNDPQQVLDICNNN 340

Query: 65  ERYMEQIHNMYDLPIVPLPVHRGRVRVEEAELDEVFHNVEEVPSMT*TQSQTGYGTPMMM 124
           ERYME+IHN+YDLPIVP PVHR R RVEEAELDEV+HNVEEVP  T TQSQTGYG+PM M
Sbjct: 341 ERYMEKIHNIYDLPIVPPPVHRERFRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTM 400

Query: 125 MPTFGAGYCDSKVG-RKL*FKVGPSSSYMDVGPSTSYLHGHRRGHGEHNKYMYYEAVLVE 184
           MPTFGAGYCDS+V        VGP SSYMDVGPSTSY++GH RG+GEHN+Y+Y+EA   +
Sbjct: 401 MPTFGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYMYGHGRGYGEHNEYLYHEAP-TD 460

Query: 185 VLDRQEYQQEPENQEESEQHRVQSRR 210
           V DRQEYQQEP+NQE+ EQHRVQSRR
Sbjct: 461 VSDRQEYQQEPKNQEDREQHRVQSRR 485

[Close]

BLAST of Chy10G173550 vs. ExPASy TrEMBL
Match: A0A5A7V342 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold79G001560 PE=4 SV=1)

HSP 1 Score: 313.5 bits (802), Expect = 6.5e-82
Identity = 160/206 (77.67%), Postives = 177/206 (85.92%), Query Frame = 0


Query: 5   VLIKQFDMNVTQEYIHWYNNITRLYITRPGVAVGDLRSNNTRLRDVADDPQKILDICNNN 64
           V I+QFD +VTQEYIHWY+NITRLYITRPG AVG  RSNN RLRDVADD Q+ LDICNNN
Sbjct: 5   VSIQQFDKDVTQEYIHWYSNITRLYITRPGAAVG--RSNNARLRDVADDLQQFLDICNNN 64

Query: 65  ERYMEQIHNMYDLPIVPLPVHRGRVRVEEAELDEVFHNVEEVPSMT*TQSQTGYGTPMMM 124
           ERYME+IHNMYDLPIVP PVHRG VRVEEAELD+V+HNVEEVPS T TQSQTGYG+PM M
Sbjct: 65  ERYMEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSPMTM 124

Query: 125 MPTFGAGYCDSKVG-RKL*FKVGPSSSYMDVGPSTSYLHGHRRGHGEHNKYMYYEAVLVE 184
           MPTF AGYCD +VG       VGPSSSY+DV PSTSY+HGH RG+GEHN+Y+Y+EA   +
Sbjct: 125 MPTFEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHSRGYGEHNEYLYHEAP-AD 184

Query: 185 VLDRQEYQQEPENQEESEQHRVQSRR 210
           V DRQEYQQEPENQE+ EQHRVQSRR
Sbjct: 185 VSDRQEYQQEPENQEDREQHRVQSRR 207

[Close]

BLAST of Chy10G173550 vs. ExPASy TrEMBL
Match: A0A5A7SLF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold34G002870 PE=4 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 5.0e-74
Identity = 149/208 (71.63%), Postives = 173/208 (83.17%), Query Frame = 0


Query: 2   ARGVLIKQFDMNVTQEYIHWYNNITRLYITRPGVAVGDLRSNNTRLRDVADDPQKILDIC 61
           A GVLI+QFD++VTQEYIH Y NITRLYIT+    +G  RSNN RLRDVADD Q++LDIC
Sbjct: 2   AIGVLIQQFDIDVTQEYIHSY-NITRLYITQ----LGATRSNNARLRDVADDSQQVLDIC 61

Query: 62  NNNERYMEQIHNMYDLPIVPLPVHRGRVRVEEAELDEVFHNVEEVPSMT*TQSQTGYGTP 121
           NNN+R+ME+IHNMY LPIVP  +HRGRV+VEEAELDEV+HNVEE+   T  Q+QTGYG+P
Sbjct: 62  NNNKRHMEEIHNMYHLPIVPPQIHRGRVQVEEAELDEVYHNVEEMTPTTQKQNQTGYGSP 121

Query: 122 MMMMPTFGAGYCDSKVGRKL*FK-VGPSSSYMDVGPSTSYLHGHRRGHGEHNKYMYYEAV 181
           M+MMPTFG GYCD +V  +     VGPSSSYMDVGPSTSY+HGHR  +GEHN+Y+Y+EA 
Sbjct: 122 MIMMPTFGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTSYMHGHRHDYGEHNEYLYHEAP 181

Query: 182 LVEVLDRQEYQQEPENQEESEQHRVQSR 209
             EV DRQEYQQEPENQEE EQHRVQSR
Sbjct: 182 -TEVSDRQEYQQEPENQEELEQHRVQSR 203

[Close]

BLAST of Chy10G173550 vs. ExPASy TrEMBL
Match: A0A5D3CH23 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold227G00320 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 3.2e-73
Identity = 135/173 (78.03%), Postives = 151/173 (87.28%), Query Frame = 0


Query: 4   GVLIKQFDMNVTQEYIHWYNNITRLYITRPGVAVGDLRSNNTRLRDVADDPQKILDICNN 63
           GV I+QFD++VTQEYIHWYNNITRLYITRPG AVG LRSNN RLRDVADDPQ++L+ICNN
Sbjct: 103 GVSIQQFDIDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNARLRDVADDPQQVLNICNN 162

Query: 64  NERYMEQIHNMYDLPIVPLPVHRGRVRVEEAELDEVFHNVEEVPSMT*TQSQTGYGTPMM 123
           N+RYME+IHNMYDL IVP PVHRGRVRVEEAELDEV+HNVEEVP  T TQSQTGYG+PM 
Sbjct: 163 NKRYMEEIHNMYDLSIVPPPVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMT 222

Query: 124 MMPTFGAGYCDSKVGR-KL*FKVGPSSSYMDVGPSTSYLHGHRRGHGEHNKYM 176
           MMPTFGAGY DS+VG       + PSS YMDVGPS  Y+HGH+RG+GEHNKY+
Sbjct: 223 MMPTFGAGYYDSEVGTGYYDAGISPSSLYMDVGPSNFYMHGHKRGYGEHNKYL 275

[Close]

BLAST of Chy10G173550 vs. ExPASy TrEMBL
Match: A0A5A7TBF8 (Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold84G00270 PE=4 SV=1)

HSP 1 Score: 281.6 bits (719), Expect = 2.7e-72
Identity = 134/173 (77.46%), Postives = 150/173 (86.71%), Query Frame = 0


Query: 4   GVLIKQFDMNVTQEYIHWYNNITRLYITRPGVAVGDLRSNNTRLRDVADDPQKILDICNN 63
           GV I+QFD++VTQEYIHWYNNITRLYITRP  AVG LRSNN RLRDVADDPQ++L+ICNN
Sbjct: 112 GVSIQQFDIDVTQEYIHWYNNITRLYITRPRAAVGHLRSNNARLRDVADDPQQVLNICNN 171

Query: 64  NERYMEQIHNMYDLPIVPLPVHRGRVRVEEAELDEVFHNVEEVPSMT*TQSQTGYGTPMM 123
           N+RYME+IHNMYDL IVP PVHRGRVRVEEAELDEV+HNVEEVP  T TQSQTGYG+PM 
Sbjct: 172 NKRYMEEIHNMYDLSIVPPPVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMT 231

Query: 124 MMPTFGAGYCDSKVGR-KL*FKVGPSSSYMDVGPSTSYLHGHRRGHGEHNKYM 176
           MMPTFGAGY DS+VG       + PSS YMDVGPS  Y+HGH+RG+GEHNKY+
Sbjct: 232 MMPTFGAGYYDSEVGTGYYDAGISPSSLYMDVGPSNFYMHGHKRGYGEHNKYL 284

[Close]

BLAST of Chy10G173550 vs. NCBI nr
Match: KAA0062642.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 313 bits (802), Expect = 1.11e-105
Identity = 161/209 (77.03%), Postives = 178/209 (85.17%), Query Frame = 0


Query: 2   ARGVLIKQFDMNVTQEYIHWYNNITRLYITRPGVAVGDLRSNNTRLRDVADDPQKILDIC 61
           A  V I+QFD +VTQEYIHWY+NITRLYITRPG AVG  RSNN RLRDVADD Q+ LDIC
Sbjct: 2   AIRVSIQQFDKDVTQEYIHWYSNITRLYITRPGAAVG--RSNNARLRDVADDLQQFLDIC 61

Query: 62  NNNERYMEQIHNMYDLPIVPLPVHRGRVRVEEAELDEVFHNVEEVPSMT*TQSQTGYGTP 121
           NNNERYME+IHNMYDLPIVP PVHRG VRVEEAELD+V+HNVEEVPS T TQSQTGYG+P
Sbjct: 62  NNNERYMEEIHNMYDLPIVPPPVHRGCVRVEEAELDKVYHNVEEVPSTTQTQSQTGYGSP 121

Query: 122 MMMMPTFGAGYCDSKVG-RKL*FKVGPSSSYMDVGPSTSYLHGHRRGHGEHNKYMYYEAV 181
           M MMPTF AGYCD +VG       VGPSSSY+DV PSTSY+HGH RG+GEHN+Y+Y+EA 
Sbjct: 122 MTMMPTFEAGYCDFEVGIGYYDAGVGPSSSYVDVSPSTSYMHGHSRGYGEHNEYLYHEAP 181

Query: 182 LVEVLDRQEYQQEPENQEESEQHRVQSRR 209
             +V DRQEYQQEPENQE+ EQHRVQSRR
Sbjct: 182 -ADVSDRQEYQQEPENQEDREQHRVQSRR 207

[Close]

BLAST of Chy10G173550 vs. NCBI nr
Match: TYK23842.1 (serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 314 bits (804), Expect = 4.15e-102
Identity = 158/206 (76.70%), Postives = 177/206 (85.92%), Query Frame = 0


Query: 5   VLIKQFDMNVTQEYIHWYNNITRLYITRPGVAVGDLRSNNTRLRDVADDPQKILDICNNN 64
           V I+QFDM+VTQEYIH YNNITRLYITRPG  VG LRSNN RLRDV +DPQ++LDICNNN
Sbjct: 281 VSIQQFDMDVTQEYIHLYNNITRLYITRPGAIVGHLRSNNARLRDVVNDPQQVLDICNNN 340

Query: 65  ERYMEQIHNMYDLPIVPLPVHRGRVRVEEAELDEVFHNVEEVPSMT*TQSQTGYGTPMMM 124
           ERYME+IHN+YDLPIVP PVHR R RVEEAELDEV+HNVEEVP  T TQSQTGYG+PM M
Sbjct: 341 ERYMEKIHNIYDLPIVPPPVHRERFRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMTM 400

Query: 125 MPTFGAGYCDSKVG-RKL*FKVGPSSSYMDVGPSTSYLHGHRRGHGEHNKYMYYEAVLVE 184
           MPTFGAGYCDS+V        VGP SSYMDVGPSTSY++GH RG+GEHN+Y+Y+EA   +
Sbjct: 401 MPTFGAGYCDSEVSIGYYDAVVGPLSSYMDVGPSTSYMYGHGRGYGEHNEYLYHEAP-TD 460

Query: 185 VLDRQEYQQEPENQEESEQHRVQSRR 209
           V DRQEYQQEP+NQE+ EQHRVQSRR
Sbjct: 461 VSDRQEYQQEPKNQEDREQHRVQSRR 485

[Close]

BLAST of Chy10G173550 vs. NCBI nr
Match: KAA0025972.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 287 bits (734), Expect = 1.34e-95
Identity = 149/208 (71.63%), Postives = 172/208 (82.69%), Query Frame = 0


Query: 2   ARGVLIKQFDMNVTQEYIHWYNNITRLYITRPGVAVGDLRSNNTRLRDVADDPQKILDIC 61
           A GVLI+QFD++VTQEYIH YN ITRLYIT+ G      RSNN RLRDVADD Q++LDIC
Sbjct: 2   AIGVLIQQFDIDVTQEYIHSYN-ITRLYITQLGAT----RSNNARLRDVADDSQQVLDIC 61

Query: 62  NNNERYMEQIHNMYDLPIVPLPVHRGRVRVEEAELDEVFHNVEEVPSMT*TQSQTGYGTP 121
           NNN+R+ME+IHNMY LPIVP  +HRGRV+VEEAELDEV+HNVEE+   T  Q+QTGYG+P
Sbjct: 62  NNNKRHMEEIHNMYHLPIVPPQIHRGRVQVEEAELDEVYHNVEEMTPTTQKQNQTGYGSP 121

Query: 122 MMMMPTFGAGYCDSKVGRKL*FK-VGPSSSYMDVGPSTSYLHGHRRGHGEHNKYMYYEAV 181
           M+MMPTFG GYCD +V  +     VGPSSSYMDVGPSTSY+HGHR  +GEHN+Y+Y+EA 
Sbjct: 122 MIMMPTFGVGYCDFEVNTEYYDSGVGPSSSYMDVGPSTSYMHGHRHDYGEHNEYLYHEAP 181

Query: 182 LVEVLDRQEYQQEPENQEESEQHRVQSR 208
             EV DRQEYQQEPENQEE EQHRVQSR
Sbjct: 182 -TEVSDRQEYQQEPENQEELEQHRVQSR 203

[Close]

BLAST of Chy10G173550 vs. NCBI nr
Match: TYK11193.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 283 bits (724), Expect = 1.07e-92
Identity = 136/174 (78.16%), Postives = 152/174 (87.36%), Query Frame = 0


Query: 4   GVLIKQFDMNVTQEYIHWYNNITRLYITRPGVAVGDLRSNNTRLRDVADDPQKILDICNN 63
           GV I+QFD++VTQEYIHWYNNITRLYITRPG AVG LRSNN RLRDVADDPQ++L+ICNN
Sbjct: 103 GVSIQQFDIDVTQEYIHWYNNITRLYITRPGAAVGHLRSNNARLRDVADDPQQVLNICNN 162

Query: 64  NERYMEQIHNMYDLPIVPLPVHRGRVRVEEAELDEVFHNVEEVPSMT*TQSQTGYGTPMM 123
           N+RYME+IHNMYDL IVP PVHRGRVRVEEAELDEV+HNVEEVP  T TQSQTGYG+PM 
Sbjct: 163 NKRYMEEIHNMYDLSIVPPPVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMT 222

Query: 124 MMPTFGAGYCDSKVGRKL*FKVG--PSSSYMDVGPSTSYLHGHRRGHGEHNKYM 175
           MMPTFGAGY DS+VG    +  G  PSS YMDVGPS  Y+HGH+RG+GEHNKY+
Sbjct: 223 MMPTFGAGYYDSEVGTGY-YDAGISPSSLYMDVGPSNFYMHGHKRGYGEHNKYL 275

[Close]

BLAST of Chy10G173550 vs. NCBI nr
Match: KAA0038951.1 (mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 280 bits (716), Expect = 2.35e-91
Identity = 135/174 (77.59%), Postives = 151/174 (86.78%), Query Frame = 0


Query: 4   GVLIKQFDMNVTQEYIHWYNNITRLYITRPGVAVGDLRSNNTRLRDVADDPQKILDICNN 63
           GV I+QFD++VTQEYIHWYNNITRLYITRP  AVG LRSNN RLRDVADDPQ++L+ICNN
Sbjct: 112 GVSIQQFDIDVTQEYIHWYNNITRLYITRPRAAVGHLRSNNARLRDVADDPQQVLNICNN 171

Query: 64  NERYMEQIHNMYDLPIVPLPVHRGRVRVEEAELDEVFHNVEEVPSMT*TQSQTGYGTPMM 123
           N+RYME+IHNMYDL IVP PVHRGRVRVEEAELDEV+HNVEEVP  T TQSQTGYG+PM 
Sbjct: 172 NKRYMEEIHNMYDLSIVPPPVHRGRVRVEEAELDEVYHNVEEVPPTTQTQSQTGYGSPMT 231

Query: 124 MMPTFGAGYCDSKVGRKL*FKVG--PSSSYMDVGPSTSYLHGHRRGHGEHNKYM 175
           MMPTFGAGY DS+VG    +  G  PSS YMDVGPS  Y+HGH+RG+GEHNKY+
Sbjct: 232 MMPTFGAGYYDSEVGTGY-YDAGISPSSLYMDVGPSNFYMHGHKRGYGEHNKYL 284

The following BLAST results are available for this feature:

BLAST of Chy10G173550 vs.


Match Name	E-value	Identity	Description

BLAST of Chy10G173550 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DJV7	2.9e-82	76.70	Serine/threonine-protein phosphatase 7 long form-like protein OS=Cucumis melo va...	[more]
A0A5A7V342	6.5e-82	77.67	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5A7SLF8	5.0e-74	71.63	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5D3CH23	3.2e-73	78.03	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]
A0A5A7TBF8	2.7e-72	77.46	Mediator of RNA polymerase II transcription subunit 12-like isoform X1 OS=Cucumi...	[more]

BLAST of Chy10G173550 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0062642.1	1.11e-105	77.03	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
TYK23842.1	4.15e-102	76.70	serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var....	[more]
KAA0025972.1	1.34e-95	71.63	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
TYK11193.1	1.07e-92	78.16	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]
KAA0038951.1	2.35e-91	77.59	mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis ...	[more]

BLAST of Chy10G173550 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 187..207

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G173550.1	Chy10G173550.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010073	meristem maintenance