Chy10G172780 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G172780
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	B-like cyclin
Location	chrH10: 2152047 .. 2159653 (-)
RNA-Seq Expression	Chy10G172780
Synteny	Chy10G172780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATTGAACTCGACACAACTGTCAACTCCGACATCAAAAGACACTTGTTCTGGGTTTGGTTAGTACAACATTTTACAGGAGATGCTCACAAGACTTGGTTTGAAGGAATCATGATCAATTAAAGGGGCCACCATTTTTGACCAAAATGTTGTACTTCTGGGCATTATTTGTACATTAGCTATTAGACCCTTCTGCTGCTTTCTTGTATGTACTGTGCTGTAGGCCTTTGAGTTGTGGCTTTTGGGCTGGGGGCTGCTGTAAGGGGTGTAAATTTTTTATTATGATTATGATTATTTTATGCATACATTAATCCCCAAAAAAAAATCAACCTAAGAAACATGATCAACATGACTAGTGTGTTCATATTTTGGCATGTGTTAGAATACTTGGACAATCATGAGATATTTTTTAGTGCAATAGATGTTGGACATTAAGCAACGCATTAAGTGAATGTATGCACCTTTTATCGCATGACCTTAACTTAGTCGCATACTTAGAGTCTTGATACCATATCTATGATAGCATTATTTTAATGTATAAACACAAACAAGTACGACAAATTTGTTTAAAGGATAACCCGATAGACTTATTTATAAAATCATTATTTATGGTAACTTTTGAAAATTTGGTTCATGACATTAATGCAATGACCCAGGGATCTCAAGTGAAGTTTTCATAAGGGCAAATGAATTGTATTTTTTGTAAGTATAAATTATATGAAATATTTTTTTTCTTAACTGGCATTATTTTTCATTGAATTTTTTTTAGTAAGACTTTAACGATGCATATTTCATATATTTACTGAGCATCTAAGCGGAGTATTATGAATATTATAAATATAGGTGTTAAGTAGATGTTCATTCTTAGTATTCATTGCCAAGTGTCAAAATTCCAATATTTCATTTGTAGTCCACACGTCTTATGATAATGCATCTTTAATATCTATGTAGTTAGTGTTTCATGAAATTACATCCTTAATGTTCATGTAATCCACCACCTACTTGCCATTTTAGGCATAAATAGAGTTTTTGGTAGATCTTGTAAGACAAAAAAATCCGTTGAAATTCCAAAAGTCTTATAGATAGAGGAAGTTTTTGAAAATTATTAAGAATATCATTTTAGTAGCTATTATTATTATTATTAAAGAAATTGTCAAAAATAGAAAAATTGACAAAAAAAAAAAAGTGTAATAAATTTTATTTTGAGTAGTTTTTTTTCTTCGAATGTAAATAGTTTAATTTTTTTTCTATTTTTGAAAAAAACTATTTATTATTATTACTACTACTATTATTAGTATTATTATTATTATTATTATACTTATTCTATTATTATTGTTGTTGTGGTTGTTGTTATTTTTATTATTATTATTATTTTTATTATTATTATTATTTTTATTAATTACTATTATTACAATAATAATAATAATAATAATAATAATTATTATTATTATTAATATTATTTTTATTTTTATTTTATTTTATTGTTGTTGTTGGTGTTGTTGTTGTTTTTGTTGTTTTTGTTGTTGTTATTATTATTGTTATTATTATTATTATTATTGTTATTATTATTATTGTTATTATTATTATTATTATTGTTATTATTATTATTGCTATTATTATAATTGCTAATTATTTTTATTGCTATTATTATTATTATTATTCTTATTCTTAATTGCTATTATTATTGCTATTCTTATTCTTATTCTTATTATTATTATTCTTATTATTCTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGCTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTTATTATTATTATTATTATTATTATTATTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTAAAATTTTTATTATTTTTTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTGCTATTATTATTATTATTATTATACATGCTATGGTTTGTTGGTGGGTCAGGTAAAATGTATACTTTGGATAAATGATAAATTTTTTATTTAAATTGATAAAATAGTAAAATCGATAAATGTGGAAAAAAATTGTTGGAATAATGTCTTAAATGTTCCTACCTAAGTGAAAGAATTGAATACTAAATACAATTATTCAAAAAACGACAAATACCCTCTAATTAAAATCAAACTCCCAACACGCAATTAACATCTATCAAAATCCTCAAACCCCAAAAATTAACATCTATGACCATCAAAGCTCCACATAATTTATGCAGTCGTTTCATATCATATCTTCTTCAAACCTTCAAATTCTTCCGTTAAGTTACAGAAACGATTAGAGCTTCCAACTTCGTCCCCTCCAAACCCTTGATACATTTGGCACAAATCAAGAGATTTTCTTCTTGTCGGCTATCTTCTTCATCAAAACGATTTCAAATTCAGGTGAGCTTCTTCATATATCGATGCAAATGTTTGTTTTCGCAATTCTTCTTTCCTTGGTTTGAGCTTGGATTCTTAGGGAAATTTATTTTCAACCCCATTATACTTCTCATCTGTGGCATGTAGAGAGATAAAAATTGAAAATAAATTTTGGCAAGGTCCAAAATAAACATGTAAAGTATATAATAGTTTTTTTTCGTTTTTAATTATAGGTTATATATATATATACACAGTTGATCTGAATATAAATTATTTATTTGATTATTTAATTATTCTTCTAAATTACAGAAACAATATATAAAGGGATAGTTGCACATTTAGCAATTATATTCAAAATAATTAAGTATATAGCAACATTTTAAAAAATTTACAAATATAGCAAAATTTGTCAAATTCTATCAATGATATAAGTCTATCACCGATAGACCATGTTACAAATATTGGTCTATAACTGATAGACCATACAAAGTTTATCAACGATACAAGTCTATCAATTTTTTTAAAATGTTGCAATATCCTTAATTATTATTCCTAAAATGGTCATCAATTGCAATTTCTCATATATAAAAGATATCCCGATTTTAGGAACAACAAACAAAATTTTGTTTTTATAATTTGTAGCAAAATGAAAAAGAGAAGGGAGAAGGAAGAAATATTGTTGCAATGAATAAAGCTCGTCCGCTCAATTTATCATTTAGATTGCTACGAATGAATTACATGTAATCTCTTATCAATTTTGTCGCACCCAAACCTCACTAAAGGATTCCAGGTAAAAATAAACTTAAATTTCAAATTTTTGTTAGAGATTCATATAGTTAGTTTCCGAACTTTTAAAATGGATTGAAGTTTAGGGTTTCAATATCTATTATTTTAATGTAAAAGTCAAATGTGCATCAATAGATCAATTAATTTTTTCAAAAAATTAAATCTATAAACAATTTATTAGAAATTAAACTAACTCATGGAAATTACTATATATTTCTAAATTCATTCATAGCCATTCTTCTAATATTTAGCGATTCATAATAAGTTAATTGTAAAAAAAAAAAAAACAAGATAAACAAAGTGTTAGTCTTTAATGTATAAGAAGTTTTAATTGATATTCTTCACCAATCTAATGAATGGGTAAAAAAATGAAGAAGAGGGGAAAAAAAGTTATTTAAAGAATTGTAATAGGGCAGAGAGGATGCTGACGAAGAAATCAACATGCTGATAAAGATCAATAGACAAAAAAGTTATATATGCATGATGAAATGAAGAAAAAGAAGAAGAAAATCGGATGAAAATTGTATAGTAATGTATGATTGGCATATGTTTGTTATCTAGCAACTTTTAAGAATTGTGAATTCCAATTATAGAGTCTTTGTAAACTCTGACTACATGAAAAAGATTGTGTTATCATCAATGACTTGTATATATTTGTTGTGACCAATGACATTTGTTTGTTATCATCGGTAACTCGTGACTTCTAAGAATTGTGTATTTGATTTATATAGAATTTATGATATCAATTCTGAAATAAATAATATGTGTATGTAAATACATTGTATTTGACATATTGAACCTACTAATGTGTAGTATGTTGATTAATTTTGCTTGTTGGACTTGTAGTTTGCCTACAACTTCCTTGGAACGATAAGATAGATTTATTAATGTTGAATTATACTGTATTTGTGTATCCAATAAGACTGCATATAAATTTCTATTCTTCTTACAATACTGGTAACTAATCCTTGAGAAATACTAAAGTATATCAATCTTCATTGAATTCAACCGCAAAAGTAATGAAGAAAGTGTAACCAACCTTTGGTAGAATCAAAGAACGGCCACAAAATACGAAGGTAATATCCTAAATAATATGAATGTCAAGTCCATGCTTTCTAGAATACTACAATTAAACTTTTTTTTTTCTAAAAATTTACAGGTTAAAAAAAGGATGCCAGTGAGGACAAACTTTCAAATATACTATACTAAAATATGTAAGCATATCCCATACTAAAAATGATTAATAATCCTATGTAAGTTATAATTAGTTATTCTATTAATGGACTTTGTTTTTTTTATATAGTTGAACACGACAAAGGAAGAATCAGTAAAGATGGCAAAAGATAGGGAAGAACAAATGAACATAGCAAATGATAAACCATATAGAGAGGTTAAGCAGTGACATAAAAAATATGGACAGACACCAGAGAAAATAGGTTCATCAAACAAAAGAAAGAGAATTCACCTACAAACATGTCATCATTTGATTTGCATCTGAGTTGGACTTGATAGTTTGATTTTAAACTTTTCTACTATGGGATCTTATTAAATTCAAATTCAAATTGTTATTAAAAATATATATTATATATTATTTAAAATATAAAATAGCAAAAAATCTTGTAATTATATTTGACAATTATTTTAGGGATATGATCTAAAATTTAAATTCAAATGGTTATTAAAAATATATATTAGGAATTATTTAATAAATAACTTAAAATATAACAAAACCCGAAAATCTTGTATATATATATATATATATTTCATTATTTTAGGAGAGGTTGCTACAATATTTTGTAGCAACAAAATAGACGATTTAGTTAAGATTTATCAAATTTGAATGTTGATTACAAAATGCATCTTCGTGAATTCTGCCCTATTTTCGTAGCTATTTAAATACATTATCTCAAATATATGAATTATATTAAGACGTATAATCGGGTTTAATATAATTTTTTTTAAAAAAAGGCAGGCGACGATTATTCCATTTTTCTTATTTTTTTCGATTTTTGTCAATTTTCAAATTGTTTTTTAAAAATTTGCTATTTATACAGTTATCTTGTTGGTGTGTCATTGTGTTCCTAAAATTCAACCGTTTCTACTTCTAGACTCAAGATTCCAATGACTCCCTATGATTTATAGCATACAAATATACATCGAAAAAGACTTCATTTTAAACCTCACTCCAAAATTCTTTTATTCTTTCATATTTGCCTAAAATTTTGTGTTTCAACAAATTTATAGTTTTAACTATTGAAAAAAGAAAAGAAAAAGAACACACACAAAATGCCAAATCAAGTTACTTATATCGTAAACGTCGGCATGCAATGGAAGTAGCAAAAAAAATGGTGGGAAGAGGGAGAGCAACTATGGAGAGTGAGATGTTACCGGTTCTCAGAATTAGCATCGTCAAATTTCTAATTCAATCTGCTCATGTGAATCTTCACGCCCAACAATCTTTCTTAAATTTCATTTTAACTTCGCACAATCGAACGCTGATGAACATCAAATTTCAGATTCCAAATCTTCACTTCCCCAATTTCCACTTCTACTTTTACGGATTCTTCTTTCCTCCTCCTTTCACTCACTTTTGTTTCTGTTTTGAATCGATTTTCTTGCAAGGATCTCGAAGTGCCTCCGATCGTCAAGTATTCTGCGTTGTCGCTTTTCGCTGATAGATTCTACTCATCCATTTCTGGGTAATTCTTACCTCTTTTTAGTTCTTAATGCATTCAATTTTGTAACCATCTAGATGAATAAACGGTATTCTAGTTGAATGGGTGCACAATATGTTTACTGGAATGTGAAGGATATCATCGAACGGAGCTATACTTTTTCAATTTTAGCTCGATTTTACTGGTGTTGCTGGCTTGATGTCATGAATGTCTCTGGTGTTTGAAATTGGATTCGGATTGTTGTCATTTCCTAATTAACAATCGGAGAAATTATATATTTGTTATGATTCTCTCTTCGAGTGCCCCTGTCTTGGCCTTAAGGAAGATTGCAGCTAATCTAGTCATAGTTTTGTCTCTCCTTTGTCGTAAGAAATTTGCATCCATATTAGCAGCGATTTGAATGAAGTTAAAAAAATGGTGTTTAGGTGCTTTTCTAAGCTCGTTTGGAAGAAATATTAAGTGTTTATCAGCGTTTTAGACTTTTCAAGATCACTTTTGATTGTTAACGAAATGCTACGGAAATTTAATTACTTTTCATTGGTTGAAGTTACTCTTCATCCTGCCAAATGCCATCCCAAACGCATACTCACCTTTTAAGTATTGATATTACTTCAAAAGGTTCACTAGCAGCAATGACTCAAGTTATTGGCTTCTGCAACCAATCACAGAAAGCAATTTGCAGTTATTTGCACTTGTTTCCCTATGGATATCTAGCAAAGTGGGTATTTCTTTCTCCTCTTTCTCAAGATGGTTGCCTTACTTCTTCACGTAATTCAACTATACTAAATCTTTTGCAGTTGCACACTTCTCATCCTCTTTCTATAAAACTTCTGAAGGCTTTTGGGGATAGGATGATCAAGGAACAACATTTTATGACACGGGATTTCTTGGATGCAGTAAGTTGTTATCACCAAAGTAGTTTTAGAATTTCTTGCTCTTGCAATCATATCCCTAATTACTGATTCTGATATTCTGTAGGAGGTCATATTCATGCGGGTATTTCTCATAAACCAAAGATGTTTTTTAACTCATTCTGGTTGAGTCATGATGATATATGTTTGTCTTCTATTAGATATTAAATTTCGAGATTGGTACTGCAAATATCACTTTTATATTTCTCGAGGAACTTCTTAATCAATTCAAGTAAGATATTTTGCTAACTCTCTCACGTGAGACTGTCATTTTAGCCTCGGATAATTGCCATCAGATTGTTCTCGGCTTCTTTTTAGTGTCTCATGCTGGTACTAAATTCAGGGAAGTAGCGAAAGTTGGAGAGCTTGTGAACTGGGAAGCATGCATGGATGTAATGGATCTTCTTTATGAAAAAGAGGAGACATCTGTGTTTTACAGGTCTCCTTGTTCTTCAGCTGCTGCCATCTTGGTATGCCTTTTTCTAGGAATGAAATTAGAACGTTTCTAATTATTCATTAACTCCCTCTACCCAATATGTGTGTAGGTTGCTTCGTATCTCATTACTGTTCCAGTTCAAGAATGGGAATTTCCAATTGTTCCCTGGG

mRNA sequence

ATGGCCATTGAACTCGACACAACTGTCAACTCCGACATCAAAAGACACTTGTTCTGGCAAAATGAAAAAGAGAAGGGAGAAGGAAGAAATATTGTTGCAATGAATAAAGCTCGTCCGCTCAATTTATCATTTAGATTGCTACGAATGAATTACATAAAAGAAAAAGAACACACACAAAATGCCAAATCAAGTTACTTATATCGTAAACGTCGGCATGCAATGGAAGTAGCAAAAAAAATGGTGGGAAGAGGGAGAGCAACTATGGAGAGTGAGATGTTACCGGTTCTCAGAATTAGCATCGTCAAATTTCTAATTCAATCTGCTCATGATCTCGAAGTGCCTCCGATCGTCAAGTATTCTGCGTTGTCGCTTTTCGCTGATAGATTCTACTCATCCATTTCTGGGTTCACTAGCAGCAATGACTCAAGTTATTGGCTTCTGCAACCAATCACAGAAAGCAATTTGCAGTTATTTGCACTTGTTTCCCTATGGATATCTAGCAAATTGCACACTTCTCATCCTCTTTCTATAAAACTTCTGAAGGCTTTTGGGGATAGGATGATCAAGGAACAACATTTTATGACACGGGATTTCTTGGATGCAGAGGTCATATTCATGCGGATATTAAATTTCGAGATTGGTACTGCAAATATCACTTTTATATTTCTCGAGGAACTTCTTAATCAATTCAAGGAAGTAGCGAAAGTTGGAGAGCTTGTGAACTGGGAAGCATGCATGGATGTAATGGATCTTCTTTATGAAAAAGAGGAGACATCTGTGTTTTACAGGTCTCCTTGTTCTTCAGCTGCTGCCATCTTGGTTGCTTCGTATCTCATTACTGTTCCAGTTCAAGAATGGGAATTTCCAATTGTTCCCTGGG

Coding sequence (CDS)

ATGGCCATTGAACTCGACACAACTGTCAACTCCGACATCAAAAGACACTTGTTCTGGCAAAATGAAAAAGAGAAGGGAGAAGGAAGAAATATTGTTGCAATGAATAAAGCTCGTCCGCTCAATTTATCATTTAGATTGCTACGAATGAATTACATAAAAGAAAAAGAACACACACAAAATGCCAAATCAAGTTACTTATATCGTAAACGTCGGCATGCAATGGAAGTAGCAAAAAAAATGGTGGGAAGAGGGAGAGCAACTATGGAGAGTGAGATGTTACCGGTTCTCAGAATTAGCATCGTCAAATTTCTAATTCAATCTGCTCATGATCTCGAAGTGCCTCCGATCGTCAAGTATTCTGCGTTGTCGCTTTTCGCTGATAGATTCTACTCATCCATTTCTGGGTTCACTAGCAGCAATGACTCAAGTTATTGGCTTCTGCAACCAATCACAGAAAGCAATTTGCAGTTATTTGCACTTGTTTCCCTATGGATATCTAGCAAATTGCACACTTCTCATCCTCTTTCTATAAAACTTCTGAAGGCTTTTGGGGATAGGATGATCAAGGAACAACATTTTATGACACGGGATTTCTTGGATGCAGAGGTCATATTCATGCGGATATTAAATTTCGAGATTGGTACTGCAAATATCACTTTTATATTTCTCGAGGAACTTCTTAATCAATTCAAGGAAGTAGCGAAAGTTGGAGAGCTTGTGAACTGGGAAGCATGCATGGATGTAATGGATCTTCTTTATGAAAAAGAGGAGACATCTGTGTTTTACAGGTCTCCTTGTTCTTCAGCTGCTGCCATCTTGGTTGCTTCGTATCTCATTACTGTTCCAGTTCAAGAATGGGAATTTCCAATTGTTCCCTGGG

Protein sequence

MAIELDTTVNSDIKRHLFWQNEKEKGEGRNIVAMNKARPLNLSFRLLRMNYIKEKEHTQNAKSSYLYRKRRHAMEVAKKMVGRGRATMESEMLPVLRISIVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSSNDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGDRMIKEQHFMTRDFLDAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETSVFYRSPCSSAAAILVASYLITVPVQEWEFPIVPWX

Homology

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BLAST of Chy10G172780 vs. ExPASy Swiss-Prot
Match: Q9C5X2 (Cyclin-J18 OS=Arabidopsis thaliana OX=3702 GN=CYCJ18 PE=2 SV=2)

HSP 1 Score: 248.1 bits (632), Expect = 1.3e-64
Identity = 124/198 (62.63%), Postives = 159/198 (80.30%), Query Frame = 0


Query: 96  LRISIVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSSNDSSYWLLQPITESNL 155
           LR  +V+FLIQS   LE+PPIVKYSALSLF DRF  ++  F     + +WLLQP+ ESNL
Sbjct: 8   LRRRLVEFLIQSTTLLELPPIVKYSALSLFFDRFRPNLVRFLQKKKAEHWLLQPLNESNL 67

Query: 156 QLFALVSLWISSKLHTSHPLSIKLLKAFGDRMIKEQHFMTRDFLDAEVIFMRILNFEIGT 215
           QLF L+S+WIS K+H +  LS+  LK+FGD++I EQ FM RDFLDAE++F+++L FEIGT
Sbjct: 68  QLFVLISIWISCKMHCTRGLSVHSLKSFGDKVITEQLFMVRDFLDAELVFLKVLKFEIGT 127

Query: 216 ANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETSVFYRSPCSSAAAILVA 275
            NI +  LE+LL QFKEVAKVGE +N+EACMD+MDLLYEKE+TS+ Y+S  S AA+ILV+
Sbjct: 128 LNIAYTRLEDLLIQFKEVAKVGEQLNFEACMDMMDLLYEKEDTSLLYQSSKSLAASILVS 187

Query: 276 SYLITVPVQEWEFPIVPW 294
           SY+ITVP Q++EFPI+PW
Sbjct: 188 SYIITVPKQQYEFPILPW 205

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BLAST of Chy10G172780 vs. ExPASy Swiss-Prot
Match: Q0DTM7 (Cyclin-J18-like OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0237900 PE=3 SV=2)

HSP 1 Score: 214.5 bits (545), Expect = 1.6e-54
Identity = 101/206 (49.03%), Postives = 151/206 (73.30%), Query Frame = 0


Query: 94  PVLRISIVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSI---SGFTSSNDS---SYWLL 153
           P  R  +++FL+ ++  L++ P+VKY+ALS FADR   S+    GF  +      + WLL
Sbjct: 17  PSRRRRLIEFLLHASTRLDLRPVVKYTALSFFADRLLPSLRRKMGFCGARGGRAVTSWLL 76

Query: 154 QPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGDRMIKEQHFMTRDFLDAEVIFMR 213
           +P+ +SNL+LFALV++WI+SK+H   PLS+K LKA GDR+I +QHF  RDF +AE++FM 
Sbjct: 77  EPLRDSNLELFALVAVWIASKIHELKPLSVKSLKALGDRIIADQHFTCRDFANAELVFME 136

Query: 214 ILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETSVFYRSPCS 273
           ++ + IG+ NI F +LEELL QF+E++K+G+L+N + CM+++D+LYE E++S  + SPC 
Sbjct: 137 VVEYNIGSLNIAFTYLEELLVQFREISKIGDLLNMDVCMEILDILYETEDSSWLFNSPCQ 196

Query: 274 SAAAILVASYLITVPVQEWEFPIVPW 294
            AA+ LV +Y I+VP Q WEFPI+PW
Sbjct: 197 LAASALVTAYAISVPKQRWEFPILPW 222

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BLAST of Chy10G172780 vs. ExPASy TrEMBL
Match: A0A0A0KSP7 (B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_5G256690 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 6.1e-110
Identity = 207/214 (96.73%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 80  MVGRGRATMESEMLPVLRISIVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 139
           MVGR RATMESEMLPVLR S+VKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS
Sbjct: 1   MVGRRRATMESEMLPVLRSSVVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 60

Query: 140 NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGDRMIKEQHFMTRDFL 199
           NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHP SIKLLKAFGD+MIKEQHFMTRDFL
Sbjct: 61  NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPPSIKLLKAFGDKMIKEQHFMTRDFL 120

Query: 200 DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETS 259
           DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEET+
Sbjct: 121 DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETT 180

Query: 260 VFYRSPCSSAAAILVASYLITVPVQEWEFPIVPW 294
           VFYRSPCSSAAAIL+ASYLITVPVQEWEFPIVPW
Sbjct: 181 VFYRSPCSSAAAILIASYLITVPVQEWEFPIVPW 214

[Close]

BLAST of Chy10G172780 vs. ExPASy TrEMBL
Match: A0A1S3C4A5 (B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103496684 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 4.1e-106
Identity = 201/214 (93.93%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 80  MVGRGRATMESEMLPVLRISIVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 139
           MV R RATM+SE LP+LRI++VKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS
Sbjct: 1   MVERRRATMDSETLPILRINVVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 60

Query: 140 NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGDRMIKEQHFMTRDFL 199
           NDS YWLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGD MIKEQHFMTRDFL
Sbjct: 61  NDSRYWLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGDTMIKEQHFMTRDFL 120

Query: 200 DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETS 259
           DAEVIFMRILNFEIGTANITFIFLEELLN FKEVAKVGELVNWEACMDVMDLLYE+EETS
Sbjct: 121 DAEVIFMRILNFEIGTANITFIFLEELLNHFKEVAKVGELVNWEACMDVMDLLYEREETS 180

Query: 260 VFYRSPCSSAAAILVASYLITVPVQEWEFPIVPW 294
           VFY SPCS AAAILVASYLITVPVQEWEFPIVPW
Sbjct: 181 VFYGSPCSLAAAILVASYLITVPVQEWEFPIVPW 214

[Close]

BLAST of Chy10G172780 vs. ExPASy TrEMBL
Match: A0A1S3C472 (B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103496684 PE=4 SV=1)

HSP 1 Score: 394.4 bits (1012), Expect = 4.1e-106
Identity = 201/214 (93.93%), Postives = 206/214 (96.26%), Query Frame = 0


Query: 80  MVGRGRATMESEMLPVLRISIVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 139
           MV R RATM+SE LP+LRI++VKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS
Sbjct: 1   MVERRRATMDSETLPILRINVVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 60

Query: 140 NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGDRMIKEQHFMTRDFL 199
           NDS YWLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGD MIKEQHFMTRDFL
Sbjct: 61  NDSRYWLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGDTMIKEQHFMTRDFL 120

Query: 200 DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETS 259
           DAEVIFMRILNFEIGTANITFIFLEELLN FKEVAKVGELVNWEACMDVMDLLYE+EETS
Sbjct: 121 DAEVIFMRILNFEIGTANITFIFLEELLNHFKEVAKVGELVNWEACMDVMDLLYEREETS 180

Query: 260 VFYRSPCSSAAAILVASYLITVPVQEWEFPIVPW 294
           VFY SPCS AAAILVASYLITVPVQEWEFPIVPW
Sbjct: 181 VFYGSPCSLAAAILVASYLITVPVQEWEFPIVPW 214

[Close]

BLAST of Chy10G172780 vs. ExPASy TrEMBL
Match: A0A6J1H0W7 (B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111458921 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.0e-96
Identity = 185/209 (88.52%), Postives = 194/209 (92.82%), Query Frame = 0


Query: 85  RATMESEMLPVLRISIVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSSNDSSY 144
           R TMESE LP+LRI +VKFLIQSAHDLEV PIVKYSALSLFADRFY S+SG TSSN S  
Sbjct: 11  RTTMESENLPILRIRVVKFLIQSAHDLEVAPIVKYSALSLFADRFYPSLSGITSSNASRN 70

Query: 145 WLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGDRMIKEQHFMTRDFLDAEVI 204
           WLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLK+FGD+MIKEQHFMTRD LDAEVI
Sbjct: 71  WLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKSFGDKMIKEQHFMTRDLLDAEVI 130

Query: 205 FMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETSVFYRS 264
           FM+IL FEIGTANITF+FLEELL QFKEVAKVGELVNWEACMDVMDLLYEKEETSV Y S
Sbjct: 131 FMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSS 190

Query: 265 PCSSAAAILVASYLITVPVQEWEFPIVPW 294
           PCS AAAILVASYLITVPVQEWEFP++PW
Sbjct: 191 PCSLAAAILVASYLITVPVQEWEFPVLPW 219

[Close]

BLAST of Chy10G172780 vs. ExPASy TrEMBL
Match: A0A6J1GZG4 (B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111458921 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 1.0e-96
Identity = 185/209 (88.52%), Postives = 194/209 (92.82%), Query Frame = 0


Query: 85  RATMESEMLPVLRISIVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSSNDSSY 144
           R TMESE LP+LRI +VKFLIQSAHDLEV PIVKYSALSLFADRFY S+SG TSSN S  
Sbjct: 11  RTTMESENLPILRIRVVKFLIQSAHDLEVAPIVKYSALSLFADRFYPSLSGITSSNASRN 70

Query: 145 WLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGDRMIKEQHFMTRDFLDAEVI 204
           WLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLK+FGD+MIKEQHFMTRD LDAEVI
Sbjct: 71  WLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKSFGDKMIKEQHFMTRDLLDAEVI 130

Query: 205 FMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETSVFYRS 264
           FM+IL FEIGTANITF+FLEELL QFKEVAKVGELVNWEACMDVMDLLYEKEETSV Y S
Sbjct: 131 FMQILKFEIGTANITFVFLEELLIQFKEVAKVGELVNWEACMDVMDLLYEKEETSVSYSS 190

Query: 265 PCSSAAAILVASYLITVPVQEWEFPIVPW 294
           PCS AAAILVASYLITVPVQEWEFP++PW
Sbjct: 191 PCSLAAAILVASYLITVPVQEWEFPVLPW 219

[Close]

BLAST of Chy10G172780 vs. NCBI nr
Match: XP_011655073.1 (cyclin-J18 isoform X12 [Cucumis sativus])

HSP 1 Score: 405 bits (1040), Expect = 1.38e-140
Identity = 207/214 (96.73%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 80  MVGRGRATMESEMLPVLRISIVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 139
           MVGR RATMESEMLPVLR S+VKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS
Sbjct: 1   MVGRRRATMESEMLPVLRSSVVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 60

Query: 140 NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGDRMIKEQHFMTRDFL 199
           NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHP SIKLLKAFGD+MIKEQHFMTRDFL
Sbjct: 61  NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPPSIKLLKAFGDKMIKEQHFMTRDFL 120

Query: 200 DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETS 259
           DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEET+
Sbjct: 121 DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETT 180

Query: 260 VFYRSPCSSAAAILVASYLITVPVQEWEFPIVPW 293
           VFYRSPCSSAAAIL+ASYLITVPVQEWEFPIVPW
Sbjct: 181 VFYRSPCSSAAAILIASYLITVPVQEWEFPIVPW 214

[Close]

BLAST of Chy10G172780 vs. NCBI nr
Match: XP_031740959.1 (cyclin-J18 isoform X9 [Cucumis sativus] >XP_031740960.1 cyclin-J18 isoform X9 [Cucumis sativus])

HSP 1 Score: 405 bits (1040), Expect = 1.84e-140
Identity = 207/214 (96.73%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 80  MVGRGRATMESEMLPVLRISIVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 139
           MVGR RATMESEMLPVLR S+VKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS
Sbjct: 1   MVGRRRATMESEMLPVLRSSVVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 60

Query: 140 NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGDRMIKEQHFMTRDFL 199
           NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHP SIKLLKAFGD+MIKEQHFMTRDFL
Sbjct: 61  NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPPSIKLLKAFGDKMIKEQHFMTRDFL 120

Query: 200 DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETS 259
           DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEET+
Sbjct: 121 DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETT 180

Query: 260 VFYRSPCSSAAAILVASYLITVPVQEWEFPIVPW 293
           VFYRSPCSSAAAIL+ASYLITVPVQEWEFPIVPW
Sbjct: 181 VFYRSPCSSAAAILIASYLITVPVQEWEFPIVPW 214

[Close]

BLAST of Chy10G172780 vs. NCBI nr
Match: XP_031740958.1 (cyclin-J18 isoform X8 [Cucumis sativus])

HSP 1 Score: 405 bits (1040), Expect = 2.93e-140
Identity = 207/214 (96.73%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 80  MVGRGRATMESEMLPVLRISIVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 139
           MVGR RATMESEMLPVLR S+VKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS
Sbjct: 1   MVGRRRATMESEMLPVLRSSVVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 60

Query: 140 NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGDRMIKEQHFMTRDFL 199
           NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHP SIKLLKAFGD+MIKEQHFMTRDFL
Sbjct: 61  NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPPSIKLLKAFGDKMIKEQHFMTRDFL 120

Query: 200 DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETS 259
           DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEET+
Sbjct: 121 DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETT 180

Query: 260 VFYRSPCSSAAAILVASYLITVPVQEWEFPIVPW 293
           VFYRSPCSSAAAIL+ASYLITVPVQEWEFPIVPW
Sbjct: 181 VFYRSPCSSAAAILIASYLITVPVQEWEFPIVPW 214

[Close]

BLAST of Chy10G172780 vs. NCBI nr
Match: XP_011655069.1 (cyclin-J18 isoform X7 [Cucumis sativus])

HSP 1 Score: 405 bits (1040), Expect = 3.04e-140
Identity = 207/214 (96.73%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 80  MVGRGRATMESEMLPVLRISIVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 139
           MVGR RATMESEMLPVLR S+VKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS
Sbjct: 1   MVGRRRATMESEMLPVLRSSVVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 60

Query: 140 NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGDRMIKEQHFMTRDFL 199
           NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHP SIKLLKAFGD+MIKEQHFMTRDFL
Sbjct: 61  NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPPSIKLLKAFGDKMIKEQHFMTRDFL 120

Query: 200 DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETS 259
           DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEET+
Sbjct: 121 DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETT 180

Query: 260 VFYRSPCSSAAAILVASYLITVPVQEWEFPIVPW 293
           VFYRSPCSSAAAIL+ASYLITVPVQEWEFPIVPW
Sbjct: 181 VFYRSPCSSAAAILIASYLITVPVQEWEFPIVPW 214

[Close]

BLAST of Chy10G172780 vs. NCBI nr
Match: XP_031740956.1 (cyclin-J18 isoform X6 [Cucumis sativus] >XP_031740957.1 cyclin-J18 isoform X6 [Cucumis sativus])

HSP 1 Score: 405 bits (1040), Expect = 3.15e-140
Identity = 207/214 (96.73%), Postives = 211/214 (98.60%), Query Frame = 0


Query: 80  MVGRGRATMESEMLPVLRISIVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 139
           MVGR RATMESEMLPVLR S+VKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS
Sbjct: 1   MVGRRRATMESEMLPVLRSSVVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSS 60

Query: 140 NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPLSIKLLKAFGDRMIKEQHFMTRDFL 199
           NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHP SIKLLKAFGD+MIKEQHFMTRDFL
Sbjct: 61  NDSSYWLLQPITESNLQLFALVSLWISSKLHTSHPPSIKLLKAFGDKMIKEQHFMTRDFL 120

Query: 200 DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETS 259
           DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEET+
Sbjct: 121 DAEVIFMRILNFEIGTANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETT 180

Query: 260 VFYRSPCSSAAAILVASYLITVPVQEWEFPIVPW 293
           VFYRSPCSSAAAIL+ASYLITVPVQEWEFPIVPW
Sbjct: 181 VFYRSPCSSAAAILIASYLITVPVQEWEFPIVPW 214

[Close]

BLAST of Chy10G172780 vs. TAIR 10
Match: AT2G01905.1 (cyclin J18 )

HSP 1 Score: 248.1 bits (632), Expect = 9.1e-66
Identity = 124/198 (62.63%), Postives = 159/198 (80.30%), Query Frame = 0


Query: 96  LRISIVKFLIQSAHDLEVPPIVKYSALSLFADRFYSSISGFTSSNDSSYWLLQPITESNL 155
           LR  +V+FLIQS   LE+PPIVKYSALSLF DRF  ++  F     + +WLLQP+ ESNL
Sbjct: 8   LRRRLVEFLIQSTTLLELPPIVKYSALSLFFDRFRPNLVRFLQKKKAEHWLLQPLNESNL 67

Query: 156 QLFALVSLWISSKLHTSHPLSIKLLKAFGDRMIKEQHFMTRDFLDAEVIFMRILNFEIGT 215
           QLF L+S+WIS K+H +  LS+  LK+FGD++I EQ FM RDFLDAE++F+++L FEIGT
Sbjct: 68  QLFVLISIWISCKMHCTRGLSVHSLKSFGDKVITEQLFMVRDFLDAELVFLKVLKFEIGT 127

Query: 216 ANITFIFLEELLNQFKEVAKVGELVNWEACMDVMDLLYEKEETSVFYRSPCSSAAAILVA 275
            NI +  LE+LL QFKEVAKVGE +N+EACMD+MDLLYEKE+TS+ Y+S  S AA+ILV+
Sbjct: 128 LNIAYTRLEDLLIQFKEVAKVGEQLNFEACMDMMDLLYEKEDTSLLYQSSKSLAASILVS 187

Query: 276 SYLITVPVQEWEFPIVPW 294
           SY+ITVP Q++EFPI+PW
Sbjct: 188 SYIITVPKQQYEFPILPW 205

The following BLAST results are available for this feature:

BLAST of Chy10G172780 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9C5X2	1.3e-64	62.63	Cyclin-J18 OS=Arabidopsis thaliana OX=3702 GN=CYCJ18 PE=2 SV=2	[more]
Q0DTM7	1.6e-54	49.03	Cyclin-J18-like OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0237900 PE=3 SV...	[more]

BLAST of Chy10G172780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSP7	6.1e-110	96.73	B-like cyclin OS=Cucumis sativus OX=3659 GN=Csa_5G256690 PE=4 SV=1	[more]
A0A1S3C4A5	4.1e-106	93.93	B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103496684 PE=4 SV=1	[more]
A0A1S3C472	4.1e-106	93.93	B-like cyclin OS=Cucumis melo OX=3656 GN=LOC103496684 PE=4 SV=1	[more]
A0A6J1H0W7	1.0e-96	88.52	B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111458921 PE=4 SV=1	[more]
A0A6J1GZG4	1.0e-96	88.52	B-like cyclin OS=Cucurbita moschata OX=3662 GN=LOC111458921 PE=4 SV=1	[more]

BLAST of Chy10G172780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655073.1	1.38e-140	96.73	cyclin-J18 isoform X12 [Cucumis sativus]	[more]
XP_031740959.1	1.84e-140	96.73	cyclin-J18 isoform X9 [Cucumis sativus] >XP_031740960.1 cyclin-J18 isoform X9 [C...	[more]
XP_031740958.1	2.93e-140	96.73	cyclin-J18 isoform X8 [Cucumis sativus]	[more]
XP_011655069.1	3.04e-140	96.73	cyclin-J18 isoform X7 [Cucumis sativus]	[more]
XP_031740956.1	3.15e-140	96.73	cyclin-J18 isoform X6 [Cucumis sativus] >XP_031740957.1 cyclin-J18 isoform X6 [C...	[more]

BLAST of Chy10G172780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01905.1	9.1e-66	62.63	cyclin J18	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006671	Cyclin, N-terminal	PFAM	PF00134	Cyclin_N	coord: 88..213 e-value: 3.1E-8 score: 33.4
None	No IPR available	GENE3D	1.10.472.10		coord: 85..213 e-value: 1.8E-13 score: 52.5
None	No IPR available	PANTHER	PTHR10177:SF425	CYCLIN-J18	coord: 82..293
IPR039361	Cyclin	PANTHER	PTHR10177	CYCLINS	coord: 82..293
IPR013763	Cyclin-like	CDD	cd00043	CYCLIN	coord: 96..199 e-value: 0.00199329 score: 34.9069
IPR036915	Cyclin-like superfamily	SUPERFAMILY	47954	Cyclin-like	coord: 88..213

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G172780.1	Chy10G172780.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0051301	cell division
cellular_component	GO:0016021	integral component of membrane