Chy10G172760 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G172760
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH10: 2050071 .. 2051463 (+)
RNA-Seq Expression	Chy10G172760
Synteny	Chy10G172760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGTGAAAGTTTTTGAAATGGACAAAATGGAGTTTTGGCCATTGCAACATCCTCTGGAACCTGATGATGAAGATCATCCTGTCATTTGCCCAATGCCCAACTCTACTTCCCTTCTTGATGTAACACCTCTCTTTAAATACCTCTCTTTCATTTATTATTTCTTTCTTTGAAATATTATTTAATGGGGTTGGTACAACGTACGTGGAGGAAAGTTTTAACTGTTTGCAACAATCTTAGATCGTTATAGAATGATCTCATTGAATATATATTTTTTTTTATAGAAATGAGTTTTCTTTTTTTCTTTTTCTTCTTGTCCACTCATGACGTGATAAGAGATATGTTTTAATTCACCTGTTAGTTGATGTATATGTGTGCATGGATTGTTGTTTATGTTTAAAACACTGATCTGGTTTTAGAACTTTTAAGAACCTTGCATTTATTTATTTTCTATTCATAAAATACTTCGTATTGTAATTGTGAACTTCTCTAACTCATCTAATTAGATTTTTTTATTTTTTTGAAAAGGTAATTAGATGTTAATTTTGTATGTTAAGAAGTTGCATGCAACATAATTGGATTATTTAGTCTTCTTGGTAACCAATTTCATTTAACTTATTTCTTCTCAATTTCAATTCAAAACAACAAAAACCCTAAAAACAACTTGAATTATCTAATTGAAAACCCTAAAAATAAAATTATGCGGTTATTTTTTCTTTCCAATTTAGGAATTCAAATACGTAAAACTATATAAAAGAAAAATTAAAGTTTAATGAATTATATAATTACATGATTGAATGCTTACAAATCAAATTTATAAAACCCTAGTTGTTAAGGCTCACTTGGATAACAGATTCATTTTTAGTTTTCCTTAAAACTTTTGTTTGTCTAATCACTATTAGAATAATATGATGTTCACCTTTCTTAAAAGTAAGATTTGAATCCCTATTCAAATTCCAAAAGTAAAACAATATTTAAGAAACGGAAAGAAACAGTTTTAAACTGTTGATTTTTTTTAATTTATAAAAAATTCACATGCTTTAAAATTTCAGTCCCAAACAAAATTCAAATATTATTGGCTCAGTCTTTAATTTGTCCCAATCTGTTTACATTTTTTTGTTTTCTTTTTTTGGGAAATGATTGTGATATGTTTGAAATTGAGGATAGGAAGGAACAATGCATAACGGGAAAAGGACACCAGAAAGCTGGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAGGTACAGGCGGAGGCAAGGCCGGTGCGGAAGCGGCACCACCGCACCCTCAGCCGACCCGACCAGCTGATGGTGGGAATGTCGCCTCGGCCGAGCACCCCAAATTTCACTATATTCCAAATGCTCCAGCAATTGGATAAATTTGAGTCATAG

mRNA sequence

ATGGAAGTGAAAGTTTTTGAAATGGACAAAATGGAGTTTTGGCCATTGCAACATCCTCTGGAACCTGATGATGAAGATCATCCTGTCATTTGCCCAATGCCCAACTCTACTTCCCTTCTTGATGAAGGAACAATGCATAACGGGAAAAGGACACCAGAAAGCTGGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAGGTACAGGCGGAGGCAAGGCCGGTGCGGAAGCGGCACCACCGCACCCTCAGCCGACCCGACCAGCTGATGGTGGGAATGTCGCCTCGGCCGAGCACCCCAAATTTCACTATATTCCAAATGCTCCAGCAATTGGATAAATTTGAGTCATAG

Coding sequence (CDS)

ATGGAAGTGAAAGTTTTTGAAATGGACAAAATGGAGTTTTGGCCATTGCAACATCCTCTGGAACCTGATGATGAAGATCATCCTGTCATTTGCCCAATGCCCAACTCTACTTCCCTTCTTGATGAAGGAACAATGCATAACGGGAAAAGGACACCAGAAAGCTGGAGGAAAAGAACAGAAGTGTCAAGAGAAGTAAAGGTACAGGCGGAGGCAAGGCCGGTGCGGAAGCGGCACCACCGCACCCTCAGCCGACCCGACCAGCTGATGGTGGGAATGTCGCCTCGGCCGAGCACCCCAAATTTCACTATATTCCAAATGCTCCAGCAATTGGATAAATTTGAGTCATAG

Protein sequence

MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTEVSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPSTPNFTIFQMLQQLDKFES*

Homology

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BLAST of Chy10G172760 vs. ExPASy TrEMBL
Match: A0A0A0KPE8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G258200 PE=4 SV=1)

HSP 1 Score: 235.3 bits (599), Expect = 1.2e-58
Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTLHNGKRTPESWRKRTE 60

Query: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPSTPNFTIFQMLQQLDKFES 116
           VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRP TPNFTIFQMLQQLDKFES
Sbjct: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITPNFTIFQMLQQLDKFES 115

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BLAST of Chy10G172760 vs. ExPASy TrEMBL
Match: A0A5A7SM67 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold452G00230 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.8e-57
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           MEVK FEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1   MEVKAFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTIHNGKRTPESWRKRTE 60

Query: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPSTPNFTIFQMLQQLDKFES 116
           VSREVK+QAEARPVRKRHHRT++RPDQLM GMSPRP+TPNFTIFQMLQQLDKFES
Sbjct: 61  VSREVKLQAEARPVRKRHHRTVTRPDQLMAGMSPRPTTPNFTIFQMLQQLDKFES 115

[Close]

BLAST of Chy10G172760 vs. ExPASy TrEMBL
Match: A0A1S3C3T8 (uncharacterized protein LOC103496689 OS=Cucumis melo OX=3656 GN=LOC103496689 PE=4 SV=1)

HSP 1 Score: 229.6 bits (584), Expect = 6.8e-57
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           MEVK FEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1   MEVKAFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTIHNGKRTPESWRKRTE 60

Query: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPSTPNFTIFQMLQQLDKFES 116
           VSREVK+QAEARPVRKRHHRT++RPDQLM GMSPRP+TPNFTIFQMLQQLDKFES
Sbjct: 61  VSREVKLQAEARPVRKRHHRTVTRPDQLMAGMSPRPTTPNFTIFQMLQQLDKFES 115

[Close]

BLAST of Chy10G172760 vs. ExPASy TrEMBL
Match: A0A6J1J9G4 (uncharacterized protein LOC111482932 OS=Cucurbita maxima OX=3661 GN=LOC111482932 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.3e-43
Identity = 94/120 (78.33%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKRTE
Sbjct: 22  MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRTE 81

Query: 61  VSREVKVQAE--ARPVRKRHHRTLSRPDQLMVGMSP---RPSTPNFTIFQMLQQLDKFES 116
           VSREVK  AE   R VRKRHH TLSRPD LM GMSP    P+T NFTIFQMLQQLDKFES
Sbjct: 82  VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 140

[Close]

BLAST of Chy10G172760 vs. ExPASy TrEMBL
Match: A0A6J1FRX2 (uncharacterized protein LOC111447618 OS=Cucurbita moschata OX=3662 GN=LOC111447618 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 7.3e-43
Identity = 94/120 (78.33%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKRTE
Sbjct: 22  MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRTE 81

Query: 61  VSREVKVQAE--ARPVRKRHHRTLSRPDQLMVGMSP---RPSTPNFTIFQMLQQLDKFES 116
           VSREVK  AE   R VRKRHH TLSRPD LM GMSP    P+T NFTIFQMLQQLDKFES
Sbjct: 82  VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 140

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BLAST of Chy10G172760 vs. NCBI nr
Match: XP_004140415.1 (uncharacterized protein LOC101204044 [Cucumis sativus] >KGN50779.1 hypothetical protein Csa_004700 [Cucumis sativus])

HSP 1 Score: 232 bits (592), Expect = 6.90e-77
Identity = 113/115 (98.26%), Postives = 114/115 (99.13%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTLHNGKRTPESWRKRTE 60

Query: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPSTPNFTIFQMLQQLDKFES 115
           VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRP TPNFTIFQMLQQLDKFES
Sbjct: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPITPNFTIFQMLQQLDKFES 115

[Close]

BLAST of Chy10G172760 vs. NCBI nr
Match: XP_008456876.1 (PREDICTED: uncharacterized protein LOC103496689 [Cucumis melo] >KAA0032122.1 uncharacterized protein E6C27_scaffold452G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 226 bits (577), Expect = 1.34e-74
Identity = 108/115 (93.91%), Postives = 113/115 (98.26%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           MEVK FEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGT+HNGKRTPESWRKRTE
Sbjct: 1   MEVKAFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTIHNGKRTPESWRKRTE 60

Query: 61  VSREVKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPSTPNFTIFQMLQQLDKFES 115
           VSREVK+QAEARPVRKRHHRT++RPDQLM GMSPRP+TPNFTIFQMLQQLDKFES
Sbjct: 61  VSREVKLQAEARPVRKRHHRTVTRPDQLMAGMSPRPTTPNFTIFQMLQQLDKFES 115

[Close]

BLAST of Chy10G172760 vs. NCBI nr
Match: XP_022942644.1 (uncharacterized protein LOC111447618 [Cucurbita moschata] >XP_022984750.1 uncharacterized protein LOC111482932 [Cucurbita maxima] >KAG6599867.1 hypothetical protein SDJN03_05100, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 180 bits (456), Expect = 8.45e-56
Identity = 94/120 (78.33%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKRTE
Sbjct: 22  MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRTE 81

Query: 61  VSREVKVQAEA--RPVRKRHHRTLSRPDQLMVGMSP---RPSTPNFTIFQMLQQLDKFES 115
           VSREVK  AE   R VRKRHH TLSRPD LM GMSP    P+T NFTIFQMLQQLDKFES
Sbjct: 82  VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 140

[Close]

BLAST of Chy10G172760 vs. NCBI nr
Match: KAG7030551.1 (hypothetical protein SDJN02_04588, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 180 bits (456), Expect = 2.93e-55
Identity = 94/120 (78.33%), Postives = 100/120 (83.33%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKRTE
Sbjct: 61  MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRTE 120

Query: 61  VSREVKVQAEA--RPVRKRHHRTLSRPDQLMVGMSP---RPSTPNFTIFQMLQQLDKFES 115
           VSREVK  AE   R VRKRHH TLSRPD LM GMSP    P+T NFTIFQMLQQLDKFES
Sbjct: 121 VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 179

[Close]

BLAST of Chy10G172760 vs. NCBI nr
Match: XP_023551192.1 (uncharacterized protein LOC111808825 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 178 bits (451), Expect = 4.88e-55
Identity = 93/120 (77.50%), Postives = 99/120 (82.50%), Query Frame = 0


Query: 1   MEVKVFEMDKMEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTE 60
           ME +V E+D MEFWPLQHP EPDDED PV+CPMPNS+S+LDEGTMHNGKR PESWRKR E
Sbjct: 22  MEAQVVEVD-MEFWPLQHPTEPDDEDRPVVCPMPNSSSILDEGTMHNGKRAPESWRKRAE 81

Query: 61  VSREVKVQAEA--RPVRKRHHRTLSRPDQLMVGMSP---RPSTPNFTIFQMLQQLDKFES 115
           VSREVK  AE   R VRKRHH TLSRPD LM GMSP    P+T NFTIFQMLQQLDKFES
Sbjct: 82  VSREVKASAETAVRVVRKRHHHTLSRPDHLMGGMSPVPLLPTTQNFTIFQMLQQLDKFES 140

[Close]

BLAST of Chy10G172760 vs. TAIR 10
Match: AT2G01913.1 (unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 9.9e-08
Identity = 39/119 (32.77%), Postives = 59/119 (49.58%), Query Frame = 0


Query: 11  MEFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTEVSREVKV--- 70
           +EF P++HP+EP++ED PV CP+P S+SL+ +      +++   W K    S E  V   
Sbjct: 29  VEFCPVEHPIEPEEEDRPVKCPVPISSSLIHKPK----EKSKPGWVKHRASSYETPVYPP 88

Query: 71  -QAEARPVRKRHHR----------TLSRPDQLMVGMSPRPSTPNFTIFQMLQQLDKFES 116
            +   R VRKRH+           T S  D             N T +++LQQ+ +FES
Sbjct: 89  PRHHVRNVRKRHNSFDVEGNNNFFTRSHDDD-----ETTSRRSNVTFYRVLQQVQEFES 138

[Close]

BLAST of Chy10G172760 vs. TAIR 10
Match: AT2G35585.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G31940.1); Has 67 Blast hits to 67 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 67; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.6 bits (96), Expect = 5.1e-04
Identity = 30/105 (28.57%), Postives = 52/105 (49.52%), Query Frame = 0


Query: 12  EFWPLQHPLEPDDEDHPVICPMPNSTSLLDEGTMHNGKRTPESWRKRTEVS-------RE 71
           EF P+ HP+EP D D P+ CP+P   S+L++G +   + +  S R+R++++        E
Sbjct: 53  EFKPVDHPMEPLDNDQPIQCPLP-EPSILNDGRLWKERVSASSMRRRSDLAIVQDGMDEE 112

Query: 72  VKVQAEARPVRKRHHRTLSRPDQLMVGMSPRPSTPNFTIFQMLQQ 110
             V   + P R     T +RP      + P  S P   +  +L++
Sbjct: 113 SDVSVTSIPSRTSQCNT-NRP------ILPSLSAPEHDLLNLLEE 149

The following BLAST results are available for this feature:

BLAST of Chy10G172760 vs.


Match Name	E-value	Identity	Description

BLAST of Chy10G172760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KPE8	1.2e-58	98.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G258200 PE=4 SV=1	[more]
A0A5A7SM67	6.8e-57	93.91	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3C3T8	6.8e-57	93.91	uncharacterized protein LOC103496689 OS=Cucumis melo OX=3656 GN=LOC103496689 PE=...	[more]
A0A6J1J9G4	7.3e-43	78.33	uncharacterized protein LOC111482932 OS=Cucurbita maxima OX=3661 GN=LOC111482932...	[more]
A0A6J1FRX2	7.3e-43	78.33	uncharacterized protein LOC111447618 OS=Cucurbita moschata OX=3662 GN=LOC1114476...	[more]

BLAST of Chy10G172760 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140415.1	6.90e-77	98.26	uncharacterized protein LOC101204044 [Cucumis sativus] >KGN50779.1 hypothetical ...	[more]
XP_008456876.1	1.34e-74	93.91	PREDICTED: uncharacterized protein LOC103496689 [Cucumis melo] >KAA0032122.1 unc...	[more]
XP_022942644.1	8.45e-56	78.33	uncharacterized protein LOC111447618 [Cucurbita moschata] >XP_022984750.1 unchar...	[more]
KAG7030551.1	2.93e-55	78.33	hypothetical protein SDJN02_04588, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023551192.1	4.88e-55	77.50	uncharacterized protein LOC111808825 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Chy10G172760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G01913.1	9.9e-08	32.77	unknown protein; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae ...	[more]
AT2G35585.1	5.1e-04	28.57	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..98
None	No IPR available	PANTHER	PTHR34196:SF4	BNAC09G20880D PROTEIN	coord: 6..115
None	No IPR available	PANTHER	PTHR34196	OS02G0697700 PROTEIN	coord: 6..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G172760.1	Chy10G172760.1	mRNA