Chy10G172590 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G172590
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Unknown protein
Location	chrH10: 1696839 .. 1697660 (-)
RNA-Seq Expression	Chy10G172590
Synteny	Chy10G172590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGTTGCTCATTTAGTGATGCAATGGCTAAATCGCATAAGGTTTATTGCTGAGGGACCTCCAATTGGGCAATTTCATATGGATGTAACTCCAGAATACATCCATTGGTACAAAAACATCACCAGGCTCTATATCACCTGACCAGAAGCTGTTATGGGTCATCTGGTACACATTTAAATACTGTCTAATTATTTTAGTATAAATTTATTTTCAATGCTTTCTAATTTATTTTAATATTTAACAGACATCGTCGAACAATAGTAGACTTCAAGATGTTTCACATGATCCACAACAGGTCCTAAATATATGTAGTGATAACGAGCAGTACATGGAGAACATTCACTATATGTACGATGTCCCTATTGTACCTGATCCAGTTCAAATGAGACGTGCTCGCGGGCAAGAGTCTGATCAATTGGAAGAAGTTAACCAACACATGGAAGAAGTGCCTCCCGTGACACAGACACAGAGCAAGCATGGTTACGTTAGTCCAATAATGATGATGCCAGCATTTGGAACAACATATTATGATTCAGGATTCGGTCAATTGTTAAACTTTGGAACATGATATTATAATTCAGAGGCAAGTCCATCATCATCAAACTTTGGGCAACAATACTATGATTTAGGGAGTGATCCATCATCTTCATACATGCATGGTCACAGATGCGGTCATGGAGAACATTATGAATATTTGTACTACGAAATGCCTGCAACAGTACCTGAGCAACTAGATGAGCAACAATAATAAGAGAATCAGGAGAAAATACAACAACAAAGAGTTTAGAGTCCACGACGACAACCAACTAGAAATCGTCGATGTC

mRNA sequence

AGTTGCTCATTTAGTGATGCAATGGCTAAATCGCATAAGGTTTATTGCTGAGGGACCTCCAATTGGGCAATTTCATATGGATGTAACTCCAGAATACATCCATTGGTACAAAAACATCACCAGGCTCTATATCACCTGACCAGAAGCTGTTATGGGTCATCTGACATCGTCGAACAATAGTAGACTTCAAGATGTTTCACATGATCCACAACAGGTCCTAAATATATGTAGTGATAACGAGCAGTACATGGAGAACATTCACTATATGTACGATGTCCCTATTGTACCTGATCCAGTTCAAATGAGACGTGCTCGCGGGCAAGAGTCTGATCAATTGGAAGAAGTTAACCAACACATGGAAGAAGTGCCTCCCGTGACACAGACACAGAGCAAGCATGGTTACGTTAGTCCAATAATGATGATGCCAGCATTTGGAACAACATATTATGATTCAGGATTCGGTCAATTGTTAAACTTTGGAACATGATATTATAATTCAGAGGCAAGGAGTGATCCATCATCTTCATACATGCATGGTCACAGATGCGGTCATGGAGAACATTATGAATATTTGTACTACGAAATGCCTGCAACAGTACCTGAGCAACTAGATGAGCAACAATAATAAGAGAATCAGGAGAAAATACAACAACAAAGAGTTTAGAGTCCACGACGACAACCAACTAGAAATCGTCGATGTC

Coding sequence (CDS)

AGTTGCTCATTTAGTGATGCAATGGCTAAATCGCATAAGGTTTATTGCTGAGGGACCTCCAATTGGGCAATTTCATATGGATGTAACTCCAGAATACATCCATTGGTACAAAAACATCACCAGGCTCTATATCACCTGACCAGAAGCTGTTATGGGTCATCTGACATCGTCGAACAATAGTAGACTTCAAGATGTTTCACATGATCCACAACAGGTCCTAAATATATGTAGTGATAACGAGCAGTACATGGAGAACATTCACTATATGTACGATGTCCCTATTGTACCTGATCCAGTTCAAATGAGACGTGCTCGCGGGCAAGAGTCTGATCAATTGGAAGAAGTTAACCAACACATGGAAGAAGTGCCTCCCGTGACACAGACACAGAGCAAGCATGGTTACGTTAGTCCAATAATGATGATGCCAGCATTTGGAACAACATATTATGATTCAGGATTCGGTCAATTGTTAAACTTTGGAACATGATATTATAATTCAGAGGCAAGGAGTGATCCATCATCTTCATACATGCATGGTCACAGATGCGGTCATGGAGAACATTATGAATATTTGTACTACGAAATGCCTGCAACAGTACCTGAGCAACTAGATGAGCAACAATAATAAGAGAATCAGGAGAAAATACAACAACAAAGAGTTTAGAGTCCACGACGACAACCAACTAGAAATCGTCGATGTC

Protein sequence

SCSFSDAMAKSHKVYC*GTSNWAISYGCNSRIHPLVQKHHQALYHLTRSCYGSSDIVEQ**TSRCFT*STTGPKYM***RAVHGEHSLYVRCPYCT*SSSNETCSRARV*SIGRS*PTHGRSASRDTDTEQAWLR*SNNDDASIWNNIL*FRIRSIVKLWNMIL*FRGKE*SIIFIHAWSQMRSWRTL*IFVLRNACNST*ATR*ATIIRESGENTTTKSLESTTTTN*KSSMX

Homology

The following BLAST results are available for this feature:

BLAST of Chy10G172590 vs.


Match Name	E-value	Identity	Description

BLAST of Chy10G172590 vs.


Match Name	E-value	Identity	Description

BLAST of Chy10G172590 vs.


Match Name	E-value	Identity	Description

BLAST of Chy10G172590 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 195..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G172590.1	Chy10G172590.1	mRNA