Chy10G172150 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G172150
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	Retrovirus-related Pol polyprotein from transposon TNT 1-94
Location	chrH10: 803484 .. 804299 (-)
RNA-Seq Expression	Chy10G172150
Synteny	Chy10G172150

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAGAGACCATATTATTAGACCCATTAGCACAATACTTGATGGAACAAATTATATCACTTGGACAAATCAAATGAAAAGTTTTCTAATTGGGCGAAAACTATGGCGCATTGTAACTGACGACATAACTAAACCAACTAAACAGGACAAGGACAAGGAAGAAGACAGCAAATTCATTGAACGCCTCAAAGATTGGGACAGTAAGAATCATCAAATTATCACCTGGCTTGGTAACACTTCTATTCCTGCTATACATGCACAATTTGATGCTTTTGATGATGCTAAAGAATTATGGGATTTTTTGTCTACACGCTTTAAATCTATTGGATTAGCTCATTACTATCAACTACACAGTACACTAGTAAATCTTCATCAAGATACTGGTCAGTCTGTCAATGAATATTTGGCAGTTCTTCAACCCATTTGGACTCAGCTTGATCAAGCTAGCATCAGCAAAGATCATCTTCGTCTTATTAAAGTCCTTATGGGATTACGCCCAGAATATGAATCTGTCAGGGCTGCCTTGCTACACCGGAGTCCATTGCCCTCATTGGATACTGCTATCCAAGAAATCCTGTTTGAAGAAAAGCACATTGGCATTAATTCTGCTAAACAATCTGATGTTGTCCTTGCCAGCACTTATACGCCTAATAGAGCATCAAATACCTTTTGTAAGAACTGTAAGCTCTTTGGTCACAAGTTTATTGATTGCCCTAAAATAGAGTGCAGGTACTGCCATAAATGTGGTCATATTCTGGATAACTGTCCTACCAGACCACCTCGACCTCCTGGCTCTTCTACAAAAGAGAAAAAC

mRNA sequence

ATGGAGAGAGACCATATTATTAGACCCATTAGCACAATACTTGATGGAACAAATTATATCACTTGGACAAATCAAATGAAAAGTTTTCTAATTGGGCGAAAACTATGGCGCATTGTAACTGACGACATAACTAAACCAACTAAACAGGACAAGGACAAGGAAGAAGACAGCAAATTCATTGAACGCCTCAAAGATTGGGACAGTAAGAATCATCAAATTATCACCTGGCTTGGTAACACTTCTATTCCTGCTATACATGCACAATTTGATGCTTTTGATGATGCTAAAGAATTATGGGATTTTTTGTCTACACGCTTTAAATCTATTGGATTAGCTCATTACTATCAACTACACAGTACACTAGTAAATCTTCATCAAGATACTGGTCAGTCTGTCAATGAATATTTGGCAGTTCTTCAACCCATTTGGACTCAGCTTGATCAAGCTAGCATCAGCAAAGATCATCTTCGTCTTATTAAAGTCCTTATGGGATTACGCCCAGAATATGAATCTGTCAGGGCTGCCTTGCTACACCGGAGTCCATTGCCCTCATTGGATACTGCTATCCAAGAAATCCTGTTTGAAGAAAAGCACATTGGCATTAATTCTGCTAAACAATCTGATGTTGTCCTTGCCAGCACTTATACGCCTAATAGAGCATCAAATACCTTTTGTAAGAACTGTAAGCTCTTTGGTCACAAGTTTATTGATTGCCCTAAAATAGAGTGCAGGTACTGCCATAAATGTGGTCATATTCTGGATAACTGTCCTACCAGACCACCTCGACCTCCTGGCTCTTCTACAAAAGAGAAAAAC

Coding sequence (CDS)

ATGGAGAGAGACCATATTATTAGACCCATTAGCACAATACTTGATGGAACAAATTATATCACTTGGACAAATCAAATGAAAAGTTTTCTAATTGGGCGAAAACTATGGCGCATTGTAACTGACGACATAACTAAACCAACTAAACAGGACAAGGACAAGGAAGAAGACAGCAAATTCATTGAACGCCTCAAAGATTGGGACAGTAAGAATCATCAAATTATCACCTGGCTTGGTAACACTTCTATTCCTGCTATACATGCACAATTTGATGCTTTTGATGATGCTAAAGAATTATGGGATTTTTTGTCTACACGCTTTAAATCTATTGGATTAGCTCATTACTATCAACTACACAGTACACTAGTAAATCTTCATCAAGATACTGGTCAGTCTGTCAATGAATATTTGGCAGTTCTTCAACCCATTTGGACTCAGCTTGATCAAGCTAGCATCAGCAAAGATCATCTTCGTCTTATTAAAGTCCTTATGGGATTACGCCCAGAATATGAATCTGTCAGGGCTGCCTTGCTACACCGGAGTCCATTGCCCTCATTGGATACTGCTATCCAAGAAATCCTGTTTGAAGAAAAGCACATTGGCATTAATTCTGCTAAACAATCTGATGTTGTCCTTGCCAGCACTTATACGCCTAATAGAGCATCAAATACCTTTTGTAAGAACTGTAAGCTCTTTGGTCACAAGTTTATTGATTGCCCTAAAATAGAGTGCAGGTACTGCCATAAATGTGGTCATATTCTGGATAACTGTCCTACCAGACCACCTCGACCTCCTGGCTCTTCTACAAAAGAGAAAAAC

Protein sequence

MERDHIIRPISTILDGTNYITWTNQMKSFLIGRKLWRIVTDDITKPTKQDKDKEEDSKFIERLKDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKELWDFLSTRFKSIGLAHYYQLHSTLVNLHQDTGQSVNEYLAVLQPIWTQLDQASISKDHLRLIKVLMGLRPEYESVRAALLHRSPLPSLDTAIQEILFEEKHIGINSAKQSDVVLASTYTPNRASNTFCKNCKLFGHKFIDCPKIECRYCHKCGHILDNCPTRPPRPPGSSTKEKN

Homology

[Close]

BLAST of Chy10G172150 vs. ExPASy TrEMBL
Match: A0A5A7UGZ4 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold131G002020 PE=4 SV=1)

HSP 1 Score: 476.5 bits (1225), Expect = 7.5e-131
Identity = 227/272 (83.46%), Postives = 249/272 (91.54%), Query Frame = 0


Query: 1   MERDHIIRPISTILDGTNYITWTNQMKSFLIGRKLWRIVTDDITKPTKQDKDKEEDSKFI 60
           ME+  I RPISTILDG+NYITW NQMKSFLIGRKLWRIVT DITKPTKQ  DKE+DSKFI
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTRDITKPTKQ--DKEDDSKFI 60

Query: 61  ERLKDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKELWDFLSTRFKSIGLAHYYQLHST 120
           ERL++WDSKNHQIITWL NTSIPAIH QFDAFD+AKELWDFLSTRFKS+GLAHYYQLH++
Sbjct: 61  ERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFDNAKELWDFLSTRFKSVGLAHYYQLHNS 120

Query: 121 LVNLHQDTGQSVNEYLAVLQPIWTQLDQASISKDHLRLIKVLMGLRPEYESVRAALLHRS 180
           LVNL+Q+ GQSVNEYLAVLQPIWTQLDQA+ISKDHLRLIKVLMGLRPEYESV+AALLHRS
Sbjct: 121 LVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVKAALLHRS 180

Query: 181 PLPSLDTAIQEILFEEKHIGINSAKQSDVVLASTYTPNRASNTFCKNCKLFGHKFIDCPK 240
           PLPSLD AIQEILFEE+ +GIN +K SDVVLASTY+P  AS+TFCKNCKL GHKFI+CPK
Sbjct: 181 PLPSLDAAIQEILFEERRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFINCPK 240

Query: 241 IECRYCHKCGHILDNCPTRPPRPPGSSTKEKN 273
           IECRYCHK GHILDNCP +PP+P   ST+ KN
Sbjct: 241 IECRYCHKSGHILDNCPIKPPKPRNYSTRAKN 270

[Close]

BLAST of Chy10G172150 vs. ExPASy TrEMBL
Match: A0A5D3CT53 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45G00560 PE=4 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 1.3e-130
Identity = 227/272 (83.46%), Postives = 249/272 (91.54%), Query Frame = 0


Query: 1   MERDHIIRPISTILDGTNYITWTNQMKSFLIGRKLWRIVTDDITKPTKQDKDKEEDSKFI 60
           ME+  I RPISTILDG+NYITW NQMKSFLIGRKLWRIVT DITKPTKQ  DKE+DSKFI
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTRDITKPTKQ--DKEDDSKFI 60

Query: 61  ERLKDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKELWDFLSTRFKSIGLAHYYQLHST 120
           ERL++WDSKNHQIITWL NTSIPAIH QFDAFD+AKELW+FLSTRFKS+GLAHYYQLH++
Sbjct: 61  ERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFDNAKELWNFLSTRFKSVGLAHYYQLHNS 120

Query: 121 LVNLHQDTGQSVNEYLAVLQPIWTQLDQASISKDHLRLIKVLMGLRPEYESVRAALLHRS 180
           LVNL+Q+ GQSVNEYLAVLQPIWTQLDQA+ISKDHLRLIKVLMGLRPEYESVRAALLHRS
Sbjct: 121 LVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRS 180

Query: 181 PLPSLDTAIQEILFEEKHIGINSAKQSDVVLASTYTPNRASNTFCKNCKLFGHKFIDCPK 240
           PLPSLD AIQEILFEE+ +GIN +K SDVVLASTY+P  AS+TFCKNCKL GHKFI+CPK
Sbjct: 181 PLPSLDAAIQEILFEERRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFINCPK 240

Query: 241 IECRYCHKCGHILDNCPTRPPRPPGSSTKEKN 273
           IECRYCHK GHILDNCP +PP+P   ST+ KN
Sbjct: 241 IECRYCHKSGHILDNCPIKPPKPRNYSTRAKN 270

[Close]

BLAST of Chy10G172150 vs. ExPASy TrEMBL
Match: A0A5A7UM60 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold96G001060 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.7e-130
Identity = 225/272 (82.72%), Postives = 249/272 (91.54%), Query Frame = 0


Query: 1   MERDHIIRPISTILDGTNYITWTNQMKSFLIGRKLWRIVTDDITKPTKQDKDKEEDSKFI 60
           ME+  I RPISTILDG+NYITW NQMKSFLIGRKLWRIVT DITKPTKQ  DKE+D+KFI
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQ--DKEDDNKFI 60

Query: 61  ERLKDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKELWDFLSTRFKSIGLAHYYQLHST 120
           ERL++WDSKNHQIITWL NTSIPAIH QFDAF++AKELW+FLSTRFKS+GLAHYYQLH++
Sbjct: 61  ERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNS 120

Query: 121 LVNLHQDTGQSVNEYLAVLQPIWTQLDQASISKDHLRLIKVLMGLRPEYESVRAALLHRS 180
           LVNL+Q+ GQSVNEYLAVLQPIWTQLDQA+ISKDHLRLIKVLMGLRPEYESVRAALLHRS
Sbjct: 121 LVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRS 180

Query: 181 PLPSLDTAIQEILFEEKHIGINSAKQSDVVLASTYTPNRASNTFCKNCKLFGHKFIDCPK 240
           PLPSLD AIQEILFEE+ +GIN +K SD VLASTY+P+ AS+TFCKNCKL GHKFI+CPK
Sbjct: 181 PLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPSEASSTFCKNCKLTGHKFINCPK 240

Query: 241 IECRYCHKCGHILDNCPTRPPRPPGSSTKEKN 273
           IECRYCHK GHILDNCP +PPRP   ST+ KN
Sbjct: 241 IECRYCHKPGHILDNCPIKPPRPRNYSTRAKN 270

[Close]

BLAST of Chy10G172150 vs. ExPASy TrEMBL
Match: A0A5A7VIT8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1017G00050 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 6.4e-130
Identity = 226/272 (83.09%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MERDHIIRPISTILDGTNYITWTNQMKSFLIGRKLWRIVTDDITKPTKQDKDKEEDSKFI 60
           ME+  I RPISTILDG+NYITW NQMKSFLIGRKLWRIVT DITKPTKQ  DKE+DSKFI
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQ--DKEDDSKFI 60

Query: 61  ERLKDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKELWDFLSTRFKSIGLAHYYQLHST 120
           ERL++WDSKNHQIITWL NTSIPAIH QFDAF++AKELW+FLSTRFKS+GLAHYYQLH++
Sbjct: 61  ERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNS 120

Query: 121 LVNLHQDTGQSVNEYLAVLQPIWTQLDQASISKDHLRLIKVLMGLRPEYESVRAALLHRS 180
           LVNL+Q+ GQSVNEYLAVLQPIWTQLDQA+ISKDHLRLIKVLMGLRPEYESVRAALLHRS
Sbjct: 121 LVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRS 180

Query: 181 PLPSLDTAIQEILFEEKHIGINSAKQSDVVLASTYTPNRASNTFCKNCKLFGHKFIDCPK 240
           PLPSLD AIQEILFEE+ +GIN +K SD VLASTY+P  AS+TFCKNCKL GHKFI+CPK
Sbjct: 181 PLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPK 240

Query: 241 IECRYCHKCGHILDNCPTRPPRPPGSSTKEKN 273
           IECRYCHK GHILDNCP +PPRP   ST+ KN
Sbjct: 241 IECRYCHKPGHILDNCPIKPPRPRNYSTRAKN 270

[Close]

BLAST of Chy10G172150 vs. ExPASy TrEMBL
Match: A0A5D3D7V8 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00480 PE=4 SV=1)

HSP 1 Score: 473.4 bits (1217), Expect = 6.4e-130
Identity = 226/272 (83.09%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MERDHIIRPISTILDGTNYITWTNQMKSFLIGRKLWRIVTDDITKPTKQDKDKEEDSKFI 60
           ME+  I RPISTILDG+NYITW NQMKSFLIGRKLWRIVT DITKPTKQ  DKE+DSKFI
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQ--DKEDDSKFI 60

Query: 61  ERLKDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKELWDFLSTRFKSIGLAHYYQLHST 120
           ERL++WDSKNHQIITWL NTSIPAIH QFDAF++AKELW+FLSTRFKS+GLAHYYQLH++
Sbjct: 61  ERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNS 120

Query: 121 LVNLHQDTGQSVNEYLAVLQPIWTQLDQASISKDHLRLIKVLMGLRPEYESVRAALLHRS 180
           LVNL+Q+ GQSVNEYLAVLQPIWTQLDQA+ISKDHLRLIKVLMGLRPEYESVRAALLHRS
Sbjct: 121 LVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRS 180

Query: 181 PLPSLDTAIQEILFEEKHIGINSAKQSDVVLASTYTPNRASNTFCKNCKLFGHKFIDCPK 240
           PLPSLD AIQEILFEE+ +GIN +K SD VLASTY+P  AS+TFCKNCKL GHKFI+CPK
Sbjct: 181 PLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPK 240

Query: 241 IECRYCHKCGHILDNCPTRPPRPPGSSTKEKN 273
           IECRYCHK GHILDNCP +PPRP   ST+ KN
Sbjct: 241 IECRYCHKPGHILDNCPIKPPRPRNYSTRAKN 270

[Close]

BLAST of Chy10G172150 vs. NCBI nr
Match: XP_031740126.1 (uncharacterized protein LOC116403359 [Cucumis sativus])

HSP 1 Score: 494 bits (1271), Expect = 5.44e-175
Identity = 242/271 (89.30%), Postives = 252/271 (92.99%), Query Frame = 0


Query: 1   MERDHIIRPISTILDGTNYITWTNQMKSFLIGRKLWRIVTDDITKPTKQDKDKEEDSKFI 60
           MERDHI RPISTILDGTNYITW NQMKSFLIGRKLWRIVT DITKPT     KE D+ FI
Sbjct: 1   MERDHIFRPISTILDGTNYITWANQMKSFLIGRKLWRIVTGDITKPTA----KEGDNTFI 60

Query: 61  ERLKDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKELWDFLSTRFKSIGLAHYYQLHST 120
           ERL+DWDSKNHQIITWLGNTSIPAIHAQFDAFDDAK LWDFLSTRFKSIGLAHYYQLHST
Sbjct: 61  ERLEDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKILWDFLSTRFKSIGLAHYYQLHST 120

Query: 121 LVNLHQDTGQSVNEYLAVLQPIWTQLDQASISKDHLRLIKVLMGLRPEYESVRAALLHRS 180
           LVNL+QD+GQSVNEYLAVLQPIWTQLDQA+ISKDHLRLIKVLMGLRPEYESVRAALLHR+
Sbjct: 121 LVNLNQDSGQSVNEYLAVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRN 180

Query: 181 PLPSLDTAIQEILFEEKHIGINSAKQSDVVLASTYTPNRASNTFCKNCKLFGHKFIDCPK 240
           PLPSLD AIQEILFEEK +GINS KQSDVVLASTYTPNRA+N FCKNCKL GHKF +CPK
Sbjct: 181 PLPSLDAAIQEILFEEKRLGINSTKQSDVVLASTYTPNRAANMFCKNCKLSGHKFSNCPK 240

Query: 241 IECRYCHKCGHILDNCPTRPPRPPGSSTKEK 271
           IECRYCHK GHILDNCPTRPPRPP +STKEK
Sbjct: 241 IECRYCHKHGHILDNCPTRPPRPPSTSTKEK 267

[Close]

BLAST of Chy10G172150 vs. NCBI nr
Match: TYK29664.1 (Zinc finger, CCHC-type [Cucumis melo var. makuwa])

HSP 1 Score: 457 bits (1176), Expect = 1.80e-160
Identity = 223/272 (81.99%), Postives = 244/272 (89.71%), Query Frame = 0


Query: 1   MERDHIIRPISTILDGTNYITWTNQMKSFLIGRKLWRIVTDDITKPTKQDKDKEEDSKFI 60
           ME+  I RPISTILDG+NYITW NQMKSFLIGRKLWRIVT DITK TKQ+K  E+DSKFI
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKLTKQEK--EDDSKFI 60

Query: 61  ERLKDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKELWDFLSTRFKSIGLAHYYQLHST 120
           E L++WDSKNHQIITWL NTSIPAIH QFDAF++AKELW+FLSTRFKS+GL HYYQLH++
Sbjct: 61  ECLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLTHYYQLHNS 120

Query: 121 LVNLHQDTGQSVNEYLAVLQPIWTQLDQASISKDHLRLIKVLMGLRPEYESVRAALLHRS 180
           LVNL+QD GQSVNEYLAVLQPIWTQLDQA+ISKDHLRLIKVLMGL PEYESVRAALLHRS
Sbjct: 121 LVNLNQDVGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLHPEYESVRAALLHRS 180

Query: 181 PLPSLDTAIQEILFEEKHIGINSAKQSDVVLASTYTPNRASNTFCKNCKLFGHKFIDCPK 240
           PLPSLD AIQEILFEE+ +GIN +K SD VLASTY+P  AS+TFCKNCKL GHKFI+CPK
Sbjct: 181 PLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPK 240

Query: 241 IECRYCHKCGHILDNCPTRPPRPPGSSTKEKN 272
           IECRYCHK GHILDNCP +PPRP   STK KN
Sbjct: 241 IECRYCHKPGHILDNCPIKPPRPRNYSTKAKN 270

[Close]

BLAST of Chy10G172150 vs. NCBI nr
Match: XP_008449924.1 (PREDICTED: uncharacterized protein LOC103491654 [Cucumis melo])

HSP 1 Score: 453 bits (1166), Expect = 3.25e-159
Identity = 222/272 (81.62%), Postives = 241/272 (88.60%), Query Frame = 0


Query: 1   MERDHIIRPISTILDGTNYITWTNQMKSFLIGRKLWRIVTDDITKPTKQDKDKEEDSKFI 60
           ME+  I RPISTILDG+NYITW NQMKSFLIGRKLWRIVT DI K TKQDK  E+D KFI
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDIAKLTKQDK--EDDGKFI 60

Query: 61  ERLKDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKELWDFLSTRFKSIGLAHYYQLHST 120
           ERL++WD+KNHQIITWL NTSIPAIH QFDAF+ AKELWDFLSTRFKS+ LAHYYQLH+ 
Sbjct: 61  ERLEEWDNKNHQIITWLSNTSIPAIHTQFDAFESAKELWDFLSTRFKSVELAHYYQLHNN 120

Query: 121 LVNLHQDTGQSVNEYLAVLQPIWTQLDQASISKDHLRLIKVLMGLRPEYESVRAALLHRS 180
           LVNL+Q+ GQSVNEYLAVLQPIWTQLDQA+ISKDHLRLIKVLMGLRPEYESVRAALLHRS
Sbjct: 121 LVNLNQEAGQSVNEYLAVLQPIWTQLDQANISKDHLRLIKVLMGLRPEYESVRAALLHRS 180

Query: 181 PLPSLDTAIQEILFEEKHIGINSAKQSDVVLASTYTPNRASNTFCKNCKLFGHKFIDCPK 240
           PLPSLD AIQEILFEEK +GIN +  SDVVLASTY+P  AS+TFCKNCKL GHKFIDCPK
Sbjct: 181 PLPSLDAAIQEILFEEKRLGINLSNYSDVVLASTYSPPGASSTFCKNCKLTGHKFIDCPK 240

Query: 241 IECRYCHKCGHILDNCPTRPPRPPGSSTKEKN 272
           IEC+YCHK GHILDNCP +P RP   ST+ KN
Sbjct: 241 IECKYCHKPGHILDNCPIKPLRPRSYSTRPKN 270

[Close]

BLAST of Chy10G172150 vs. NCBI nr
Match: KAA0062663.1 (putative glycosyltransferase [Cucumis melo var. makuwa])

HSP 1 Score: 466 bits (1200), Expect = 6.55e-159
Identity = 226/272 (83.09%), Postives = 248/272 (91.18%), Query Frame = 0


Query: 1   MERDHIIRPISTILDGTNYITWTNQMKSFLIGRKLWRIVTDDITKPTKQDKDKEEDSKFI 60
           ME+  I RPISTILDG+NYITW NQMKSFLIGRKLWRIVT DITKPTKQDK  E+DSKFI
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTGDITKPTKQDK--EDDSKFI 60

Query: 61  ERLKDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKELWDFLSTRFKSIGLAHYYQLHST 120
           ERL++WDSKNHQIITWL NTSIPAIH QFDAF++AKELW+FLSTRFKS+GLAHYYQLH++
Sbjct: 61  ERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFENAKELWNFLSTRFKSVGLAHYYQLHNS 120

Query: 121 LVNLHQDTGQSVNEYLAVLQPIWTQLDQASISKDHLRLIKVLMGLRPEYESVRAALLHRS 180
           LVNL+Q+ GQSVNEYLAVLQPIWTQLDQA+ISKDHLRLIKVLMGLRPEYESVRAALLHRS
Sbjct: 121 LVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVRAALLHRS 180

Query: 181 PLPSLDTAIQEILFEEKHIGINSAKQSDVVLASTYTPNRASNTFCKNCKLFGHKFIDCPK 240
           PLPSLD AIQEILFEE+ +GIN +K SD VLASTY+P  AS+TFCKNCKL GHKFI+CPK
Sbjct: 181 PLPSLDAAIQEILFEERRLGINLSKHSDAVLASTYSPPGASSTFCKNCKLTGHKFINCPK 240

Query: 241 IECRYCHKCGHILDNCPTRPPRPPGSSTKEKN 272
           IECRYCHK GHILDNCP +PPRP   ST+ KN
Sbjct: 241 IECRYCHKPGHILDNCPIKPPRPRNYSTRAKN 270

[Close]

BLAST of Chy10G172150 vs. NCBI nr
Match: KAA0054248.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa])

HSP 1 Score: 469 bits (1208), Expect = 1.27e-156
Identity = 227/272 (83.46%), Postives = 249/272 (91.54%), Query Frame = 0


Query: 1   MERDHIIRPISTILDGTNYITWTNQMKSFLIGRKLWRIVTDDITKPTKQDKDKEEDSKFI 60
           ME+  I RPISTILDG+NYITW NQMKSFLIGRKLWRIVT DITKPTKQDK  E+DSKFI
Sbjct: 1   MEKSEIARPISTILDGSNYITWANQMKSFLIGRKLWRIVTRDITKPTKQDK--EDDSKFI 60

Query: 61  ERLKDWDSKNHQIITWLGNTSIPAIHAQFDAFDDAKELWDFLSTRFKSIGLAHYYQLHST 120
           ERL++WDSKNHQIITWL NTSIPAIH QFDAFD+AKELWDFLSTRFKS+GLAHYYQLH++
Sbjct: 61  ERLEEWDSKNHQIITWLSNTSIPAIHTQFDAFDNAKELWDFLSTRFKSVGLAHYYQLHNS 120

Query: 121 LVNLHQDTGQSVNEYLAVLQPIWTQLDQASISKDHLRLIKVLMGLRPEYESVRAALLHRS 180
           LVNL+Q+ GQSVNEYLAVLQPIWTQLDQA+ISKDHLRLIKVLMGLRPEYESV+AALLHRS
Sbjct: 121 LVNLNQEAGQSVNEYLAVLQPIWTQLDQATISKDHLRLIKVLMGLRPEYESVKAALLHRS 180

Query: 181 PLPSLDTAIQEILFEEKHIGINSAKQSDVVLASTYTPNRASNTFCKNCKLFGHKFIDCPK 240
           PLPSLD AIQEILFEE+ +GIN +K SDVVLASTY+P  AS+TFCKNCKL GHKFI+CPK
Sbjct: 181 PLPSLDAAIQEILFEERRLGINLSKHSDVVLASTYSPPGASSTFCKNCKLTGHKFINCPK 240

Query: 241 IECRYCHKCGHILDNCPTRPPRPPGSSTKEKN 272
           IECRYCHK GHILDNCP +PP+P   ST+ KN
Sbjct: 241 IECRYCHKSGHILDNCPIKPPKPRNYSTRAKN 270

The following BLAST results are available for this feature:

BLAST of Chy10G172150 vs.


Match Name	E-value	Identity	Description

BLAST of Chy10G172150 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UGZ4	7.5e-131	83.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3CT53	1.3e-130	83.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7UM60	3.7e-130	82.72	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5A7VIT8	6.4e-130	83.09	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]
A0A5D3D7V8	6.4e-130	83.09	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Cucumis melo var....	[more]

BLAST of Chy10G172150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031740126.1	5.44e-175	89.30	uncharacterized protein LOC116403359 [Cucumis sativus]	[more]
TYK29664.1	1.80e-160	81.99	Zinc finger, CCHC-type [Cucumis melo var. makuwa]	[more]
XP_008449924.1	3.25e-159	81.62	PREDICTED: uncharacterized protein LOC103491654 [Cucumis melo]	[more]
KAA0062663.1	6.55e-159	83.09	putative glycosyltransferase [Cucumis melo var. makuwa]	[more]
KAA0054248.1	1.27e-156	83.46	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. m...	[more]

BLAST of Chy10G172150 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 242..258 e-value: 0.5 score: 13.0 coord: 224..240 e-value: 0.28 score: 14.6
IPR025314	Domain of unknown function DUF4219	PFAM	PF13961	DUF4219	coord: 14..39 e-value: 1.5E-6 score: 27.7
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 66..197 e-value: 9.9E-12 score: 44.8
None	No IPR available	GENE3D	4.10.60.10		coord: 203..263 e-value: 2.1E-7 score: 32.6
None	No IPR available	PANTHER	PTHR34222:SF33	SUBFAMILY NOT NAMED	coord: 93..256
None	No IPR available	PANTHER	PTHR34222	FAMILY NOT NAMED	coord: 93..256
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 217..260

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G172150.1	Chy10G172150.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0016740	transferase activity
molecular_function	GO:0008270	zinc ion binding