Chy10G171980 (gene) Cucumber (hystrix) v1

Overview


Name	Chy10G171980
Type	gene
Organism	Cucumis hystrix (Cucumber (hystrix) v1)
Description	HTH myb-type domain-containing protein
Location	chrH10: 43275 .. 55029 (-)
RNA-Seq Expression	Chy10G171980
Synteny	Chy10G171980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTAGTAATAGTTGTGGAAGAAATGGAAGTGTAAGACAATACATTAGATCCAAAGTCCCAAGATTAAGATGGACTCCTGATCTTCATCATTCCTTTGTTCTTGCCATTGAAAGACTTGGTGGCCATCAAAGTATGCCTTTTTTCTTTCTTTTTCTTTATTAAGATAAGATTTATGTTTTTTATTTTTTATTTTTTGGAATTGTTAGAGGCAACCCCTAAGCTTGTTCTACAGCTCATGGATGTGAAAGGACTCACCATTTCACACGTAAAGAGCCATCTTCAGGTCTTCTTTTTTCTTTTATTTTTTTCCACCATATATAATTATTTCTTTCGTCTTTTTTTCGTAAATATTATTTATTAATTTAATATTATATCTTGCGTTACACATTTCTCATTTTAGTTCATTGTTACTTGTTTTGTTTGTATGTGACAGATGTATAGAAGTATGAGGGCAGATATGGGAAGACAAGGTACTAATAATTTCAATTTCTTTTTGGGTAATTAGATTAAATTAATTTCTTTAAATCTCTGAAATCCCATCTTTACTAACCAAAATTAAACCACTCCATTTATTATATTACCCCACTCTTTCTATTTTTGTTATTTTTAGTTCGTTCTTAAGATGATTCAAATGAAACAAAAAGTCTTCTCTCCCTTTAATCTCCTAATATTATTAATTTTCCCATACACACATTTTCTCTATTGAATAATAATTGGTTTTTTATATATATAAATAGATAGAAGTTGCTCTTCAACCCTTCAAAGAAAGGTAAGTAATTTGGAAGATGACGAAGGCGAAGACGGGTGTGTAGAAGAAGAAGTGGTGAAGGGAGGTAGAATAATTTATAGATCAAGAACAATTCAAAGTCCAGCTTCAAAAGGGTGGGTATAACAATAAAAGTTCAACATTATTAGCATTACTTTTATAGTTGTAATTGTTATTTTAAACTAATAGATTTTATGTTTGAATTTTAGAATAAAAATAGGGTGGGAAGAAAGAATAATATCAAGAAATGAAGGATATTATGGTAATGGTAATAATGGAGAAAGAGAGAATATAAAGAGAAAGAAAATGTGTGATTCTGAATCAGACGGCTTTGTACTCAACCAATCTGCTACGGCTAATCATGCTTTCAAGGTATTTTTATTTTTATTTTTATTTTTTTCGTACGTACTAACAACAGCTTTATTAAGAAGGGATGTGTGGTAAAGTTTTCCATAATTCCCTTTGTATTATTTTGTCTTATTTACTGTGGGGTTTTTTTTTTTTTTTTTTTTGGGTAAAAATAGAAATTGTCGATCTGAATTTATAGTTCAACCGACTGAAGAAGTTGAGTTCAGAACTTCTCGGATTAAGTAGGTTAGGAGTCTTTGTTGTCAATGTAGTGTTGGGATTTGGTGGTGATACTTCAAAAATGTTGGTAGCTTTTACATTGTTTGTTAACTATTTTCGGAATCCGTTTCGATCGGTATAACTATTTTATTTTTGTTTTTATATTTTATATAAAATTTAGTTTCATGCATCTATAGAGTTGAAAATTAATGGATGAAATTGGAACTTGTAAGCTTAATTTTTAAATTTCAAAATCAATGGAATTAAAATGATTATCGAGGAGATCTTAGTTCTTGAATTTTTGTTTTTAAAAAATTTAGCCTCTAGACATATATTGTACCTCTAAATTTTTTATTTTGTTATTTAGATTTTTTTTCGTTTGGAATGTTTTAAATAAACCAAGTTACCATTTAAAAATTTGAAAATGTAGGCTTTTTATTTTGCTTGATTTTTTAATTTTGAAATGAAGTTTATTTTTCCTCAATTTTTTACAATAATTTGCATTTTATCTAAATACAAGAGTTGTACTTTTATTCTTAATATAATTCCATGAGCATAAACAAATTTTTAGAAATAACATTTTGAATTCTTAAAACTTAGACTTGGTTTTGAAAATGTTGATAAAAATGAATGAGAAAAAAAGTTAGAAATTTAGAAGTGAATAGAGATGTCAAAAATAAAACTATTACTAACTAGGAGTCTAATTTTTAAAACCTAATCATTTTTTAATTTGACTAGGAATTTCTGAAATTAAGAGAAAAGATGACTAATTTTAAACTAAACATGACTGATTTAAAAAAAGAAAAATAACTAAATTATTAATAAAAGGGTTTAATTTTAGTAAGAAATATGTAAATGTGTTGCATAAACGTAAGTGAAAATGAAGAAATTGGGATTTGGGATTAGGGTTTATGACCAACTACTTGGTTAGGTAATTACAACCTCACTTTTTCTATTATCTTGTCGGAAAACTGACGCATTTGCTATTTCACATGTACACAAAAGAGAAATGAAATATGGTAGGTTTTGAAAATAAAAAGTCAGTTAATTTTTTCTCATTTATTTGAAACATTTTTTTTCTATACTCTGAAAAATTATTGTGTGGGGTCTGGGAGCTTTCTTTTCCTTTTCTTTCTTGTGGAAACTTTTAAATTTTTATTATTAATAGAATATTATCCACTTCTTTCGTTCACATTATAACTTTGTATTCATCTTGATGGATGATACCATATTTATATTAATTTATGGGTGTTAAACTATAGTGGAAGTATCATCATCGATTCATTTTTTTGTGATACTAATATTCATAATATTCATACTCATTTTACTTACAGTAGAAATTATTGTTTTGTTTTGATAAATATCCTTTCAATGCGGGTAGAATTACACTGTACTAGTCGTTACTATTCTTTTAAGAACCCTACAATACTTTTCTTACTAAATTAAACTTCTAAACCAATAAATGGGAAGAGGGACAAGTTTAAGTTAATTGCAACCAATTGAATGGTAACATTTTTTTAAAAAAATTGTTAATATAAACCGACTTCTGCCGGCATGATATAGTCACTCTAATATTTTTATTTTTGACTTGATTTGTAAGTGTAAATATATTGAGAGAGTTTGACTAATTTTAAGAGGTGCACCGGAAAGAAAAAAGGTTGAGTTGGGTCATGTCTGAACGTAATTTCATGCATGAAAAACTGCCTCTGATTACTCCACTCTCGAGGCAAACTTGGAATAAAGGGATATCATTTCACATCTTGTAACTTGAGAAAACCCCCATCTACCTAAAACAATAACAACAACAATAGTAATAAATGTATTTTTAAATTAAAATTTGGAAGGCTTTATTTTTTACTAATTAATTAAACTTTTTGTTTAATGTCACAGATGATGAAACAAGAGGCCCATGAAAAAGCAGAGAAGATTAAAGAAAGCAAATGTTTTGAACTATCTTTGTCCCTATCTTTACAACACCATTATCATCATTCAAGCAGTGAAATGAGTGAAGCAATTTCATCTTCAAGTTCGAAGTTGGATGATAACAATAACAATAATAATAATGATGATTACAGAGATTGTTGGAGTTGGTCCTATGGAAGGGAACAGCCGAAAATTGGTGTTAATCTAGACTTGACAATGGCACTTTGTGGTAGTCGATAAGAATTTTGTATGTAATTAATTTACATGTCCTAGGTTTTTTCTTTTTTTTGTTGAATATAATGTTGGAAAAGAAAAACTTCATTCTTAGGATCACTCGAATGCAGCTGTGTTTTTGTTGAATATAATGTTGTAAAAGAAAAACATCATTTTGTAGTTTGTGTCCAATTAGGTATTTTTTTAATTCTAAATTAAACTAATCATGTTTGGAAAATGCATGATTTGAATTTTTTTAGATATCAATTAATGAAATGTATTAAATACTTAAACGTTATGTGTTTTTTATTTTTATTTTTTAAAAAAAAAGAAAGAGAAGATAAAATTGTGAGGCGGGAGAGATTCTGTGTGCGTGTGTGTGTGGTGGTGGGGGGATTGAATCTAAGTTCCTTTTGTTCCTTTGATTGTTATAGTTTCTTATTTGTTTCAAATGTTGATACGGGTTGGATTTATTTTGCATGGGAAATAATGTGTAATGCTGGAAAAAATATTGAAGGATACATTGTGAAAAATGTTAAGTCTGCTTAGATAACTATTTGGTATTAATTTATTAGCTGTGAATTTAAATTTCGAACAATTTATATGTCAAAAATTTGAAAATGCAAGAAAGATGAGTACAAGATAAACTGAAGAATTATCTAAAAAAAATGTTCCAACAATTGTGGAGTATAGAAAAAAAATACAAAAAGACTTTTCATAGGGCTTGAAAACTTTGTTCACTGCAACACTATCTATGTCTAAGGAAAGGTGTGCCAAGAAAGACATGTCAATAATATAAAATCAAATGATTCCAACAACATACTTATTTATAAATATATAATAATTACAATGGCACTAAAATAGTCTAACATAGTGAAAGATAATTAAGGCTCCCTTTAATTGTGAGATTTGGTTTCAACAAAAACTTTTTATTTTTTTCAACGTCAAATGAAAACCACTCTACGTGATACTTGGACTTTTAAGCTATATGAGAATTCCTTCGCAAGATAGTATACATATGACCAACAGATCACCTCAAGATCTACTTTAGAAAACACTTCACAATCACAGAAGGTTGAGTCTCGTCGACCATATATGTTAAGGTCCATCACCAAATTTCAAGCAAAACTCCTAACTACTACAGAAGCGAATCCACACCACATTCACTACTTAGGCAATATTTCTCTTGAGTTTGTTGTTACTGAGATATCTAAGGGTTGTTCTAATGAGTATGGTGACAAAAAGAGGTGAAATGATGGCAGGGGGAGAGTATTATACATCAAATAAAATTTGATAATTCAAATTGATCATTATCAATCTTCATGATTTTGGTTGGACAAACTACCATGTTCATTAGACTATATCAGCGAAAGGTTATCGAAGATATTAATGATATGGGTGATAGAAAAGCTATATATTAATAGTTGTAGTCTATTAATATAATAGTGATATATCTTTACCAGTGACATTAGTGATATCCTATATCAGTGATATAAGTTTATCACTTATTCATTTTACCATTTTTTATTGTTGATAGACTTTTATTTCTTACATGATATCTATCACATTAGATTGATATGGTTAGAATAACAAAATAAATAAATAGGGGTAGACATTTATTCTCAGTTTATCAACATACGGTGGGTTTTAGTTGTCTTTTTGGCCTCAAATTTATCAAGGTGGCTACATGTAAAGACAAACTACACTTTACTACTTAACACAACCCTTAAACAAATAAAATGTTAAATAAGTATATATCAATGTTAGATTTTTAACGGTTTCTATCACTGTCCATCAGGGATAAAAAAAAAGTATTATTAAGGATAAATCTGTATTATTATCTATCACTACTAGACATTAATAAAAATTATCTATCACTATTAGATAGTAATAAAAATCTATCATTGATATTATTATAGTAGTAGTAGAAGTAGAAGAAATATGACATATGATGTCGATTGGAAAAAATGAACACAAATATTTGGTGTCAATTTTTAAAATGTGAATCTTTAATGTCAGTTTTAAACCAATATCAAAGAGGAAGGATTAACGTCGGTTTAAGACCAACATTAAAGATATTTTTTATTTATTTATTTTTTTGTAAAAGTAATATTTCCTTTTTTATTTAGTTTCGTTGTTTCAAATATTAGAGTACATATATAAATTCCCATAGGCACAGGTTTTAAAACGAGAAATTTAGATAAATAATGTAGTTTTAAAAAATAATTATTGAAATATTGTAGATATTAAAATATTTATATAAATATGGTAGTTTTTTTCTCTCTCCTATGTCTTGAGTTCAACTCAAGACATTGTATTTTTTTTTTTTTTTTTTATTTTTTATTTCTATTAATTTAAATTTTCATGTTCTCTTTCTTTTAATATCACTAATTTTGTGAAAAAATTTAATTGTATTTTTTATTATTAAAAATGATTTTTGAATCATTTTTTTTAATAATGACATATAATTGATAAAAATTAAATCTAAATTAAAATATTTTTTAATAACCAAATTACATTCATTTAGAAGATTAAAAAATATCAATGTGTTTCACAACCCGGACGTCGTTGATTTCGAGCTGGTTGTCATTGTCGACTCTGAACTCTATGTTGTTCTGGCTCCTTTTGGTTCTTTAGTTCTTGTTGGTACTCTTGTCGATCTAATACCTCTACAGGTGCTTCATAATACATATATTTGTTATATTCTCCATGGCCACGTCCGTGATCATGCATGTAAGAAGTTGATGGACTGGCATCCATGTATGAAGACGATGGACCAACACTTGAATCATAATTTCCTGTACCGACCTCAGAATTACAATATCCTGCTCCAAAAGTTGGCATCATCATCATTGGAGTACCATAACCAGTTTGGCTCTGTGTTTGTGTCATAGGATGCACTTCTTCCACATTATGGGAAACTTCATCGAGTTCAAGTTCTTCCACTCGGTATGAACTAGTGGAGGTACAATAGATAGATCGTACATATTATGTATCTCCTCCATGTACCTTTCATTATTATTACATATATGAAGGACTTTTTGTGGATCATCTGCAACATCATGAAGTCTTGCATTGTTCGATCTTTGTGAATTGTAAAAAAAAAAAAAAAATTAATTGAGTAAATAATTTAAATAATTATCAGTATTTAAATATTTACGACCTACGATTGCTCCTGGTCGAGTGATGTAGAGCCTCGTTATATTATTATACCAGTGAATGTATTCTTGAGTCACATCCATACCAAATTGCTTAATCAAAACTCCTATTGCCTTAAATCTTCTACGAGACCACCATCGCACTACTAAATGTGCAATCCTGTCTGACCAAGTTGTAAATCTCAAGTCAATGTTATGCAGAAGTGACTCAATATTGCATTTTACTGGGATATTTTGTTTAAGACCGAACTGTTTGAGCACTCTATTCAGTTGGTGTCACTCACCAATATGAAAACATATGAGAGGATTGATGGTCCGCTATATATCTTGACCGTTCTTACAAAAATTTGGCAAATTATCAATCACATTTTTGTAAGGCTCCCAAATAATCTGAAACATCACACATTACATTAAAAATAAATAAATATATGTTTACTAATGTGTAAAGAAACTAAAATTTCAGTATCGACATACCTGATCACGTTGAAGAAGGTCGAACATGTACCTATACGGACTAACTACATGAGTAGCTGATTTGGTTACACAAAATTGGTCTCTCCATCTATATTAATAAAGTACTATTATAGATTTTGAATTAATTATATCACGCATCTAATATTAAACTATTGTTTGATATAAATTAAAATAAAATATTGTATCGTGAACCGTGTGCTCATCTAGGTATTAGATTATCGTTTGTATGTCTAAGTTGTGAAGCTATTGTGGGAAATCATTTCCAAGCCCATATTTGAAGAAGTATTAATGAACCAACAATGCACAAACATCACCCTTCGATGCTTTGCATAGTTGTCTATACAACCATGCCAAGGACGCTCCACCCCATAAGTATCAACCCGCCTCATGTAAAACACCTAATAATGGCAGGAACATCAGATGCACAAAACTACCTGATTTATTAGAAAATAAACTTCCATCCATCAATTGTAAAATGTATGCTCTTGCATATCTAATGACGATTTCCTCTTATGTATCATCATCAAGTCTTGGAAATTGTGTTGCTAACCACGTGAGACTTACCCTTCATCCGTTTATTTTATTAGCAGGTGGGATCACACCAAGTAACATCTGACATAAATTTATCCCGTCATGACCCAATTTCCTTTTATCTTTTAAATTTATTTTATTAGCAGGTGGAATCACACCAATTAATAGGTCTTCAACACCCAACCTATTTAAATATATACAATATTACACTAAATATTTTTTGAACTACAATATTTAAATAACTAAATATTTCTTTTATCTTTTAAATTAATGTAATTTGGTTATTAAAAAAAATTCACACTTAATTTTTCACATTACATGTCATTATCAATAATTTAAAAAAATACATCATATTTTTAATAATTAAAAAAATACAATTATAAATTTTCAAAAAAATTAGTGACAAGATAAAATTTCAATTCTGAATATGGTTTGATTTAAAAAGTAAAAATATATAATTATTTAATTATTTAAAAATATCCATGCAAATTTCTCATACGACAATAACAAAATTTAAATTTTTACATAATATTTAAAAGAGAAGTCTTGCAAAGAGAAAGCAAAATAACCAAATTTAGTTTAAATTTTTACAAAATAACCAAATTAGAGAGAAGGCAATGTTCACCAATGAGGGAAAAGACAACATATTTTAAAAATTATTAAAAACTATAATATTGTAATAAATATTTCTAAAAGTACAATAAATCTCAAAATATTTATTTCATTTACGATATTTAAATTATACCTCCGACGGGTTTACTTTTTACACGTCTCTTTTCTGCGGCCGCTGCTTCAATCTCATTGTTCGAAGATGAAGGTTCGTCCCTTAGATTTCTCCTTTCTTAGATCTCTCCTTATTTTCTCTTCAATACTAACTTAGAGGTCTCGTGTTTTTCAGTGTAATATCGCAAATCCGACTACTGGATGTCAGAAGAAGCTGGAAATTGATGATGACAAGAAACTGTTAGCTTTCTAATCCTTTTTTTCTTCTTCAATCTGTTGTTTTCATTCCGAATGTGCTTTCTGTTGTTCATATCTTTAACTTTTTACATAAATACATTGGACTGGTGGCGTGAAAGTGTTATGTTTGCTACTAGAATCCGTGTATTTTGTTTGTTTTTCCCATGCTTATATCTCTGATTTCAATACTACGGCTTCCTGAAACTAGGGTTTTGGAAATGTATAGTAAATTTATGGCTTCCCTTTTGAATGGTGGAGTAATTTGATGTATTTTCTGTGTTAGTTGTGTTAATTTTTTAGCCTTGCAGGTATGGAAGATTTTAGATAGGCTTATTTGTTGACATCTCTGGAAATTTAGCTGCTGTGACATTTGTCAGTTTTCATTGTTGGATTAGTGGTTTGTTTTTCTCCTTATTTTTTTTTGCAAAACAGGAGTTTTTAAAGCGAGAATCTTTTCTTAATTTTATTTGATCTGGAAGAACGATTTTAGCCATTCCCATTTTTTGTTTGCACATTTATTTATCATCATATTTTCTTTAGTTTTACTTTCGTAATGAACTGAAATTATTTCTTCAATTTGTTTAGTCGTGCTTTCTTTGACAAGAGGATCTCCCAGGAAGCAGTGGAGATTCCCTCGGGGACGTATGTTTGATCTTCTTTCATTAATAAAATCTTAGTTCCCAGTTTCTGTGACTGAGTCTAACTGATGATGATGCTCCTATTTCCAGGAATTTAAGGGATATATTTTCAAGATTATGGGAGGTTGTGACAAGCAAGGATTCCCAATGAAACAGGGTGTCTTGACCCCTGGCCGTGTCCGCCTCTTGCTTCCTAGAGGTCTGTGGAAATGTTTATGATTTTGATTTCCTAACTCATTTAAGCAGTAGTTTCTATTAGGTAATACGATCGGTGTTGAAATCGTTAATTTGATGTATTTTGTATGTTAATCGTTCTGTTCTCTGGCCACACGCATGTCGAACACTGTCCTCTGGCTATCTCCCACAACAACCATTCACATTTATAGAATGAAGAATCAAGAAAATTTATAGAAAGACTTGGGCGACACTTTTTAAAGTAATTCTTTGTTTTTCTATTGTTTAATAGTTTAATTTTCATGGATTTTGCTGGTAGCATATATGCTTGAACATGGTTTGGAAAGAGATGAAGAAAAATTAGATGATAGTTGTACGGATCGTTTTACCTTTATGACATTTTTTATAGACGATAGATGTTTTAGAACCAATTTTTCCAGACGATACATGTTCTAGAACCAGGCTTGGCTTGTGGAGTTCTTTTATTATAATGGAGGTTGCTTTTTTCTGGTAGAATTTTGGTGTACCATAAGAAATGACATCTGGAGGTTTTACATTATCTGATACCCAATTTTATAAAAATTTCTTTTTACAGTTTCTTACATCTTGAACTTCTAATTTTAACTCCTGTCTTGTCTGTCAATCTGAATACTTGGATTTTTTTTTTCTGTGCTGAAGTCACTAGTATTCTATTACAGAATGCACAGTTCTTTGAGCCCAATTCTGCTCTGTTTAAAGTCTGCACCAAAGATGCTTCTTATATTGTAAGGTTGAACCTTTTGCTTTTCATTCACCTATTCCGATAACAACATATGTCCATCAGCTTCTCTTCTATTGCAATTGCAACTCACATTTTTTAGGCTATTGTTAGGTGTTCTGCAATTGAAAATGTATTGCCTCGTTTGACATTTTTGTTTAGAAATGAAAAGTTGGCTATTGGTTAGATATTGCCACATTATATATGAGCAAAAACTTAGTTCATCGCCGCGAAAAATCAGCTTGCCGGAGTCCAGTAATGGGTTTTTTTTTTTTAATGATGTAATACCATAATATGTGGTTCTTCACGTCTTAATATTGCCAGTTCTTGCTGTTCTTATGGTGCTTTTTTTTTGAGGATTTAGATCAGCAAGACTTTGAGTTTACTGCCTCTATTTGTCTTCTCTATTTCATGGATCAAGTGGAGATGAGGAAGAAATTTTGGGGCTGATATTGTATTTAGGTCTGAGTAATTGTATCTTGTTTTGTACAACTATTAAAATTCATGGGCGAAAGCACAAGCAATAGGTATTTCAAAGAAAAGATTTTTTGAAAATGCATACAGTTTTTTTAAATGAAAACACAAATAACGAAAAATTTAAGAAATTAGAGCTCTGCTGTGGCATGTAAGTGATCATGAAGAGGAATAAGCATTGCAGTTTCCTTGTTATTTGTTTTAATTGAAACGGATGAAGGGGGCATTTGGTGCTGATAGAATTAAACCTGGAAGTTCCTTCTCTTGGATTTGAGTCTTGAGTCTCTTATTGTCTTTCTTTTTTCTTTAATCCTTGCAGTGAATTCTTTACCATTGAACTGTTGTGTGAACCCTGCACCTCTTATTAAGTCTCCACAAAGATTCGTATGCTGTCTCAACGATATTTACTTGCAATGTTGATGTAATGCATGTAACATGAAGATCATTTGCATCAATGATGAGTTTGTCTTATCATAATTTTTGTTTTTAGAAAATTTAACATTGTCTTACAATTTTTCCCTTTTGGTTTCTCTTGAATTTTATTTCAGACAGCAAACAGAGGTCGCAAAATTCCTTTTGATCACTTTGATTCAAATCACTGGCTACCAGTAAGTGTTAGAACTAGAAGAGATATAGCAACTAACTATCTCCCATTGTCCATCTCCCAATGTGCACATCTATAGGCTCTTAAGAGGGCTGGGATTTTTGGCATTCCGGGAGTTACATATTCACTAACTCAGGTACATAGTAGTCTTGAATTTTTCACGTCACTGAAGTGATGGATATTCTTTATATCTGAACTTGTGGTTGGTCTCTTAGAAGGTACATATTATCTGCTTGCATCTTTTGTTAACTACTCACCCGCTCTTGTTCACAAATGCCCCTACTGATACATTTTCTAATGGTTTTTTAAGGGTGTTGTAAAGAATATCATACTTGCTCTTCCTTCCACCTTGCTGTTGTTTTCTAATTCTACATTCATTATTCAGATTACCGTCTATTTGTAAAGTTGTTATCTAGCTCTATTTCTTTTTAAGTCTAACTTTTGGTTTAGGTTTTATTGATCGGAGCTACACCTGATGAAATTGGTGCAATGCCCACTCTACATGTTAATTGA

mRNA sequence

ATGAGTAGTAATAGTTGTGGAAGAAATGGAAGTGTAAGACAATACATTAGATCCAAAGTCCCAAGATTAAGATGGACTCCTGATCTTCATCATTCCTTTGTTCTTGCCATTGAAAGACTTGGTGGCCATCAAAAGGCAACCCCTAAGCTTGTTCTACAGCTCATGGATGTGAAAGGACTCACCATTTCACACGTAAAGAGCCATCTTCAGATGTATAGAAGTATGAGGGCAGATATGGGAAGACAAGATAGAAGTTGCTCTTCAACCCTTCAAAGAAAGGTAAGTAATTTGGAAGATGACGAAGGCGAAGACGGGTGTGTAGAAGAAGAAGTGGTGAAGGGAGGTAGAATAATTTATAGATCAAGAACAATTCAAAGTCCAGCTTCAAAAGGAATAAAAATAGGGTGGGAAGAAAGAATAATATCAAGAAATGAAGGATATTATGGTAATGGTAATAATGGAGAAAGAGAGAATATAAAGAGAAAGAAAATGTGTGATTCTGAATCAGACGGCTTTGTACTCAACCAATCTGCTACGGCTAATCATGCTTTCAAGATGATGAAACAAGAGGCCCATGAAAAAGCAGAGAAGATTAAAGAAAGCAAATGTTTTGAACTATCTTTGTCCCTATCTTTACAACACCATTATCATCATTCAAGCAGTGAAATGAGTGAAGCAATTTCATCTTCAAGTTCGAATCGTGCTTTCTTTGACAAGAGGATCTCCCAGGAAGCAGTGGAGATTCCCTCGGGGACGTATGAATTTAAGGGATATATTTTCAAGATTATGGGAGGTTGTGACAAGCAAGGATTCCCAATGAAACAGGGTGTCTTGACCCCTGGCCGTGTCCGCCTCTTGCTTCCTAGAGTGAATTCTTTACCATTGAACTGTTGTGTGAACCCTGCACCTCTTATTAAGTCTCCACAAAGATTCACAGCAAACAGAGGTCGCAAAATTCCTTTTGATCACTTTGATTCAAATCACTGGCTACCAGCTCTTAAGAGGGCTGGGATTTTTGGCATTCCGGGAGTTACATATTCACTAACTCAGGTTTTATTGATCGGAGCTACACCTGATGAAATTGGTGCAATGCCCACTCTACATGTTAATTGA

Coding sequence (CDS)

ATGAGTAGTAATAGTTGTGGAAGAAATGGAAGTGTAAGACAATACATTAGATCCAAAGTCCCAAGATTAAGATGGACTCCTGATCTTCATCATTCCTTTGTTCTTGCCATTGAAAGACTTGGTGGCCATCAAAAGGCAACCCCTAAGCTTGTTCTACAGCTCATGGATGTGAAAGGACTCACCATTTCACACGTAAAGAGCCATCTTCAGATGTATAGAAGTATGAGGGCAGATATGGGAAGACAAGATAGAAGTTGCTCTTCAACCCTTCAAAGAAAGGTAAGTAATTTGGAAGATGACGAAGGCGAAGACGGGTGTGTAGAAGAAGAAGTGGTGAAGGGAGGTAGAATAATTTATAGATCAAGAACAATTCAAAGTCCAGCTTCAAAAGGAATAAAAATAGGGTGGGAAGAAAGAATAATATCAAGAAATGAAGGATATTATGGTAATGGTAATAATGGAGAAAGAGAGAATATAAAGAGAAAGAAAATGTGTGATTCTGAATCAGACGGCTTTGTACTCAACCAATCTGCTACGGCTAATCATGCTTTCAAGATGATGAAACAAGAGGCCCATGAAAAAGCAGAGAAGATTAAAGAAAGCAAATGTTTTGAACTATCTTTGTCCCTATCTTTACAACACCATTATCATCATTCAAGCAGTGAAATGAGTGAAGCAATTTCATCTTCAAGTTCGAATCGTGCTTTCTTTGACAAGAGGATCTCCCAGGAAGCAGTGGAGATTCCCTCGGGGACGTATGAATTTAAGGGATATATTTTCAAGATTATGGGAGGTTGTGACAAGCAAGGATTCCCAATGAAACAGGGTGTCTTGACCCCTGGCCGTGTCCGCCTCTTGCTTCCTAGAGTGAATTCTTTACCATTGAACTGTTGTGTGAACCCTGCACCTCTTATTAAGTCTCCACAAAGATTCACAGCAAACAGAGGTCGCAAAATTCCTTTTGATCACTTTGATTCAAATCACTGGCTACCAGCTCTTAAGAGGGCTGGGATTTTTGGCATTCCGGGAGTTACATATTCACTAACTCAGGTTTTATTGATCGGAGCTACACCTGATGAAATTGGTGCAATGCCCACTCTACATGTTAATTGA

Protein sequence

MSSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYRSRTIQSPASKGIKIGWEERIISRNEGYYGNGNNGERENIKRKKMCDSESDGFVLNQSATANHAFKMMKQEAHEKAEKIKESKCFELSLSLSLQHHYHHSSSEMSEAISSSSSNRAFFDKRISQEAVEIPSGTYEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLLLPRVNSLPLNCCVNPAPLIKSPQRFTANRGRKIPFDHFDSNHWLPALKRAGIFGIPGVTYSLTQVLLIGATPDEIGAMPTLHVN*

Homology

[Close]

BLAST of Chy10G171980 vs. ExPASy Swiss-Prot
Match: A3AWH5 (Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN=MOF1 PE=1 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 3.0e-26
Identity = 68/98 (69.39%), Postives = 73/98 (74.49%), Query Frame = 0


Query: 6   CGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLTISHV 65
           CGRNG+VRQYIRSKVPRLRWT +LH SFV AIE LGG  KATPKL+LQLM VKGLTISHV
Sbjct: 8   CGRNGAVRQYIRSKVPRLRWTGELHCSFVQAIEFLGGQDKATPKLILQLMGVKGLTISHV 67

Query: 66  KSHLQMYRSMR-ADMGRQDRS-CSSTLQRKVSNLEDDE 102
           KSHLQMYR  R    G   RS     LQRK S   D++
Sbjct: 68  KSHLQMYRCSRLGSHGTGRRSEMQPQLQRKHSCGADEQ 105

[Close]

BLAST of Chy10G171980 vs. ExPASy Swiss-Prot
Match: Q700D9 (Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=3702 GN=At1g14600 PE=2 SV=2)

HSP 1 Score: 120.9 bits (302), Expect = 3.0e-26
Identity = 100/254 (39.37%), Postives = 134/254 (52.76%), Query Frame = 0


Query: 6   CGRN-----GSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGL 65
           CGR+     G VR Y+RS VPRLRWTP+LH SFV A++ LGG  KATPKLVL++MDVKGL
Sbjct: 4   CGRSNDGVIGGVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGL 63

Query: 66  TISHVKSHLQMYRSMRAD-MGRQDRSCS-STLQRKVSNLEDDEGEDGC---VEEEVVKGG 125
           TISHVKSHLQMYR  R   +G+ + S S S+ +R+  + E+D   D        + + G 
Sbjct: 64  TISHVKSHLQMYRGSRITLLGKPEESSSPSSRRRRRQDNEEDHLHDNLSVHARNDCLLGF 123

Query: 126 RII-YRSRTIQSPASKGIKIGWEERIISRNEGYYGNGNNGERENIKRKKMCDSESDGFVL 185
               +R +T  +       +      + R + + GNG     E+IK +     E++    
Sbjct: 124 HSFNFREQTSATDNDDDDFLNIMN--MERTKTFAGNG-----ESIKFQSHHSLEAEN--- 183

Query: 186 NQSATANHAFKMMKQEAHEKAEKIKESKCFELSLSLSLQHHYHH----------SSSEMS 239
               T N      ++  HE+ E        ELSLSLSL H ++H          S SE S
Sbjct: 184 ----TKNIWKNTWRENEHEEEE--------ELSLSLSLNHPHNHQQRWKSNASSSLSETS 235

[Close]

BLAST of Chy10G171980 vs. ExPASy Swiss-Prot
Match: A0A0P0X0C0 (Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN=MPH1 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 6.0e-19
Identity = 49/98 (50.00%), Postives = 65/98 (66.33%), Query Frame = 0


Query: 12  VRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLTISHVKSHLQM 71
           VRQY RS+VPR+RWT ++H  FV A+E LGG  +ATPK +LQLM VKG++ISH+KSHLQM
Sbjct: 9   VRQYNRSEVPRMRWTEEMHRQFVEAVECLGGQDEATPKRILQLMGVKGVSISHIKSHLQM 68

Query: 72  YRSMRADMGR--QDRSCSSTLQRKVSNLEDDEGEDGCV 108
           YRS  ++       +  +S     +S  E    ED C+
Sbjct: 69  YRSGSSNSNHPVSLQKLTSATVNNISKREFVNSEDRCI 106

[Close]

BLAST of Chy10G171980 vs. ExPASy Swiss-Prot
Match: Q93WJ9 (Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 3.0e-18
Identity = 65/199 (32.66%), Postives = 97/199 (48.74%), Query Frame = 0


Query: 19  KVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRAD 78
           + PR+RWT  LH  FV A+E LGGH++ATPK VL+LMDVK LT++HVKSHLQMYR+++  
Sbjct: 218 RAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKT- 277

Query: 79  MGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYRSRTIQSPASKGIKIGWEE 138
                         K +   D  GE    EE  + G  + ++S T Q   S    +  E 
Sbjct: 278 ------------TNKPAASSDGSGE----EEMGINGNEVHHQSSTDQRAQSDDTSLHQET 337

Query: 139 RIISRNEGYYGNGNNGERENIKRKKMCDSESDGFVLNQSAT-----ANHAFKMMKQEAHE 198
            I S    +    +N  RE       C S+ D  +   S +        + +  +Q +++
Sbjct: 338 DISSTQPRW----SNSSRETWPLSNNCSSDIDTMIRTSSTSMISHYQRSSIQNQEQRSND 395

Query: 199 KAEKIKESKCFELSLSLSL 213
           +A++     C   SL  +L
Sbjct: 398 QAKRCGNLSCENPSLEFTL 395

[Close]

BLAST of Chy10G171980 vs. ExPASy Swiss-Prot
Match: P51430 (40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3)

HSP 1 Score: 89.7 bits (221), Expect = 7.3e-17
Identity = 46/63 (73.02%), Postives = 48/63 (76.19%), Query Frame = 0


Query: 227 ISSSSSNRAFFDKRISQEAVEIPSGTYEFKGYIFKIMGGCDKQGFPMKQGVLTPGRVRLL 286
           I      RAFFDKR+SQE      G  EFKGY+FKIMGGCDKQGFPMKQGVLTPGRVRLL
Sbjct: 18  IDDDQKLRAFFDKRLSQEVSGDALGE-EFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLL 77

Query: 287 LPR 290
           L R
Sbjct: 78  LHR 79

[Close]

BLAST of Chy10G171980 vs. ExPASy TrEMBL
Match: A0A0A0KSV1 (SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G276460 PE=4 SV=1)

HSP 1 Score: 448.7 bits (1153), Expect = 2.3e-122
Identity = 227/232 (97.84%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MSSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGL 60
           MSSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGL
Sbjct: 1   MSSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGL 60

Query: 61  TISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYR 120
           TISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYR
Sbjct: 61  TISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYR 120

Query: 121 SRTIQSPASKGIKIGWEERIISRNEGYYGNGNNGERENIKRKKMCDSESDGFVLNQSATA 180
           SRTIQSPASK +KIGWEERIISRNE YYGNGNNGERENIKRKKMCDSESDGF+LNQSATA
Sbjct: 121 SRTIQSPASKRVKIGWEERIISRNEEYYGNGNNGERENIKRKKMCDSESDGFILNQSATA 180

Query: 181 NHAFKMMKQEAHEKAEKIKESKCFELSLSLSLQHHYHHSSSEMSEAISSSSS 233
           NHAFKMMKQEAHE+AEKIKESKCFELSLSLSLQHHYHHSSSEMSEAISSSSS
Sbjct: 181 NHAFKMMKQEAHERAEKIKESKCFELSLSLSLQHHYHHSSSEMSEAISSSSS 232

[Close]

BLAST of Chy10G171980 vs. ExPASy TrEMBL
Match: A0A1S4E2S3 (putative Myb family transcription factor At1g14600 OS=Cucumis melo OX=3656 GN=LOC103499093 PE=4 SV=1)

HSP 1 Score: 441.4 bits (1134), Expect = 3.7e-120
Identity = 221/232 (95.26%), Postives = 228/232 (98.28%), Query Frame = 0


Query: 1   MSSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGL 60
           MSSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGL
Sbjct: 1   MSSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGL 60

Query: 61  TISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYR 120
           TISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNL+DDEGEDGCVEEEVVKGGRIIYR
Sbjct: 61  TISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNLDDDEGEDGCVEEEVVKGGRIIYR 120

Query: 121 SRTIQSPASKGIKIGWEERIISRNEGYYGNGNNGERENIKRKKMCDSESDGFVLNQSATA 180
           SRTIQSPASK +KIGWEERIISRNE YYGNGNNGERENI+RKKMCDSESDG+ +NQSATA
Sbjct: 121 SRTIQSPASKRVKIGWEERIISRNEAYYGNGNNGERENIRRKKMCDSESDGYAINQSATA 180

Query: 181 NHAFKMMKQEAHEKAEKIKESKCFELSLSLSLQHHYHHSSSEMSEAISSSSS 233
           NHAFKMMKQE HE+AEKIKESKCFEL+LSLSLQHHYHHSSSEMSEAISSSSS
Sbjct: 181 NHAFKMMKQEGHERAEKIKESKCFELTLSLSLQHHYHHSSSEMSEAISSSSS 232

[Close]

BLAST of Chy10G171980 vs. ExPASy TrEMBL
Match: A0A6J1ETT3 (putative Myb family transcription factor At1g14600 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111436445 PE=4 SV=1)

HSP 1 Score: 247.3 bits (630), Expect = 1.0e-61
Identity = 154/227 (67.84%), Postives = 169/227 (74.45%), Query Frame = 0


Query: 8   RNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLTISHVKS 67
           RNGSVRQYIRSKVPRLRWTP+LHH FV+AI+ LGGH KATPKLVLQLMDVKGLTISHVKS
Sbjct: 3   RNGSVRQYIRSKVPRLRWTPELHHCFVVAIQTLGGHHKATPKLVLQLMDVKGLTISHVKS 62

Query: 68  HLQMYRSMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYRSR-TIQS 127
           HLQMYRS RAD+GRQD+ CSS + RKVSNLE +E EDGCVEEE VKGG +IYRSR T Q+
Sbjct: 63  HLQMYRSTRADIGRQDQKCSS-VGRKVSNLE-EEDEDGCVEEENVKGGGVIYRSRTTTQT 122

Query: 128 PASKGIKIGWEERIISRNEGYYGNGNNGERENIKRKKMCDSESDGFVLNQSATANHA-FK 187
            ASK           SRN+G+YG+     +E      M DSES    LNQSA ANHA FK
Sbjct: 123 SASK------RGNRSSRNDGFYGH-----KEIKMMMIMGDSESHAAALNQSA-ANHAFFK 182

Query: 188 MMKQEAHEKAEKIKESKCFELSLSLSLQHHYHHSSSEMSEAISSSSS 233
           MMK+E  EK          ELSL LSLQHH H SSSE+SEAISSSSS
Sbjct: 183 MMKKEDEEK----------ELSLCLSLQHHCHGSSSEISEAISSSSS 205

[Close]

BLAST of Chy10G171980 vs. ExPASy TrEMBL
Match: A0A6J1EPP8 (putative Myb family transcription factor At1g14600 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111436445 PE=4 SV=1)

HSP 1 Score: 244.6 bits (623), Expect = 6.6e-61
Identity = 153/230 (66.52%), Postives = 169/230 (73.48%), Query Frame = 0


Query: 8   RNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLTISHVKS 67
           RNGSVRQYIRSKVPRLRWTP+LHH FV+AI+ LGGH KATPKLVLQLMDVKGLTISHVKS
Sbjct: 3   RNGSVRQYIRSKVPRLRWTPELHHCFVVAIQTLGGHHKATPKLVLQLMDVKGLTISHVKS 62

Query: 68  HLQMYRSMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYRSR-TIQS 127
           HLQMYRS RAD+GRQD+ CSS + RKVSNLE +E EDGCVEEE VKGG +IYRSR T Q+
Sbjct: 63  HLQMYRSTRADIGRQDQKCSS-VGRKVSNLE-EEDEDGCVEEENVKGGGVIYRSRTTTQT 122

Query: 128 PASKGIKIGWEERIISRNEGYYGNGNNGERENIKRKKMCDSESDGFVLNQSATANHAF-- 187
            ASK           SRN+G+YG+     +E      M DSES    LNQSA ANHAF  
Sbjct: 123 SASK------RGNRSSRNDGFYGH-----KEIKMMMIMGDSESHAAALNQSA-ANHAFFK 182

Query: 188 --KMMKQEAHEKAEKIKESKCFELSLSLSLQHHYHHSSSEMSEAISSSSS 233
             +MMK+E  EK          ELSL LSLQHH H SSSE+SEAISSSSS
Sbjct: 183 ISQMMKKEDEEK----------ELSLCLSLQHHCHGSSSEISEAISSSSS 208

[Close]

BLAST of Chy10G171980 vs. ExPASy TrEMBL
Match: A0A6J1JVP9 (putative Myb family transcription factor At1g14600 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111490114 PE=4 SV=1)

HSP 1 Score: 243.0 bits (619), Expect = 1.9e-60
Identity = 153/228 (67.11%), Postives = 165/228 (72.37%), Query Frame = 0


Query: 8   RNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLTISHVKS 67
           RNGSVRQYIRSKVPRLRWTP+LHH FVLAI+ LGGH KATPKLVLQLMDVKGLTISHVKS
Sbjct: 3   RNGSVRQYIRSKVPRLRWTPELHHCFVLAIQTLGGHHKATPKLVLQLMDVKGLTISHVKS 62

Query: 68  HLQMYRSMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYRSR-TIQS 127
           HLQMYRS RADMGRQD  CSS + RK SN E +E EDGCVEEE VKGG + YRSR T Q+
Sbjct: 63  HLQMYRSTRADMGRQDHKCSS-VGRKASNFE-EEDEDGCVEEENVKGGGVSYRSRTTTQT 122

Query: 128 PASKGIKIGWEERIISRNEGYYGNGNNGERENIKRKKMC-DSESDGFVLNQSATANHA-F 187
            ASK           SRN+G+YG+      + IK   M  DSES G  LNQSA ANHA F
Sbjct: 123 SASK------RGNRSSRNDGFYGH------KEIKMMMMVGDSESHGVALNQSA-ANHAFF 182

Query: 188 KMMKQEAHEKAEKIKESKCFELSLSLSLQHHYHHSSSEMSEAISSSSS 233
           K MK+E  EK          ELSL L LQHH H SSSE+SEAISSSSS
Sbjct: 183 KKMKKEDEEK----------ELSLCLCLQHHCHGSSSEISEAISSSSS 205

[Close]

BLAST of Chy10G171980 vs. NCBI nr
Match: XP_011655099.1 (putative Myb family transcription factor At1g14600 [Cucumis sativus] >XP_031741830.1 putative Myb family transcription factor At1g14600 [Cucumis sativus] >KGN50826.1 hypothetical protein Csa_018861 [Cucumis sativus])

HSP 1 Score: 445 bits (1145), Expect = 2.13e-154
Identity = 227/232 (97.84%), Postives = 230/232 (99.14%), Query Frame = 0


Query: 1   MSSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGL 60
           MSSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGL
Sbjct: 1   MSSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGL 60

Query: 61  TISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYR 120
           TISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYR
Sbjct: 61  TISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYR 120

Query: 121 SRTIQSPASKGIKIGWEERIISRNEGYYGNGNNGERENIKRKKMCDSESDGFVLNQSATA 180
           SRTIQSPASK +KIGWEERIISRNE YYGNGNNGERENIKRKKMCDSESDGF+LNQSATA
Sbjct: 121 SRTIQSPASKRVKIGWEERIISRNEEYYGNGNNGERENIKRKKMCDSESDGFILNQSATA 180

Query: 181 NHAFKMMKQEAHEKAEKIKESKCFELSLSLSLQHHYHHSSSEMSEAISSSSS 232
           NHAFKMMKQEAHE+AEKIKESKCFELSLSLSLQHHYHHSSSEMSEAISSSSS
Sbjct: 181 NHAFKMMKQEAHERAEKIKESKCFELSLSLSLQHHYHHSSSEMSEAISSSSS 232

[Close]

BLAST of Chy10G171980 vs. NCBI nr
Match: XP_016902518.1 (PREDICTED: putative Myb family transcription factor At1g14600 [Cucumis melo])

HSP 1 Score: 438 bits (1126), Expect = 2.54e-151
Identity = 221/232 (95.26%), Postives = 228/232 (98.28%), Query Frame = 0


Query: 1   MSSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGL 60
           MSSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGL
Sbjct: 1   MSSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGL 60

Query: 61  TISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVKGGRIIYR 120
           TISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNL+DDEGEDGCVEEEVVKGGRIIYR
Sbjct: 61  TISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNLDDDEGEDGCVEEEVVKGGRIIYR 120

Query: 121 SRTIQSPASKGIKIGWEERIISRNEGYYGNGNNGERENIKRKKMCDSESDGFVLNQSATA 180
           SRTIQSPASK +KIGWEERIISRNE YYGNGNNGERENI+RKKMCDSESDG+ +NQSATA
Sbjct: 121 SRTIQSPASKRVKIGWEERIISRNEAYYGNGNNGERENIRRKKMCDSESDGYAINQSATA 180

Query: 181 NHAFKMMKQEAHEKAEKIKESKCFELSLSLSLQHHYHHSSSEMSEAISSSSS 232
           NHAFKMMKQE HE+AEKIKESKCFEL+LSLSLQHHYHHSSSEMSEAISSSSS
Sbjct: 181 NHAFKMMKQEGHERAEKIKESKCFELTLSLSLQHHYHHSSSEMSEAISSSSS 232

[Close]

BLAST of Chy10G171980 vs. NCBI nr
Match: XP_038892743.1 (putative Myb family transcription factor At1g14600 isoform X1 [Benincasa hispida])

HSP 1 Score: 317 bits (813), Expect = 7.61e-104
Identity = 183/244 (75.00%), Postives = 199/244 (81.56%), Query Frame = 0


Query: 2   SSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLT 61
           SSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAI++LGGHQKATPKLVLQLMDVKGLT
Sbjct: 3   SSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIQKLGGHQKATPKLVLQLMDVKGLT 62

Query: 62  ISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNLE---------DDEGEDGCVEEEVV 121
           ISHVKSHLQMYRSMRADMGRQDRS S TLQ+K+SN +         D++ +DGCVEEEVV
Sbjct: 63  ISHVKSHLQMYRSMRADMGRQDRS-SLTLQKKLSNFDCNGDNDNDNDNDNDDGCVEEEVV 122

Query: 122 KGGRIIYRSRTIQSPASKGIKIGW---EERIISRNEGYYGNGNNGERENIKRKKMCDSES 181
           K G IIYRSRTIQ+PASK  KI     EERI SRN GYY  G +   ENIK K M DSES
Sbjct: 123 KEGGIIYRSRTIQTPASKRAKIRSIKEEERIKSRNYGYYNYGESEGMENIKIKMMGDSES 182

Query: 182 DGFVLNQSATANHAFKMMKQEAHEKA-EKIKESKCFELSLSLSLQHHYHHSSSEMSEAIS 232
           +G   NQSA  N AFKMMK+E HE+  E+ KE+K FELSLSLSLQ +YHHSSSEMSEAIS
Sbjct: 183 NGVAPNQSAKPNDAFKMMKREEHEREDEEEKENKYFELSLSLSLQQNYHHSSSEMSEAIS 242

[Close]

BLAST of Chy10G171980 vs. NCBI nr
Match: XP_038892744.1 (putative Myb family transcription factor At1g14600 isoform X2 [Benincasa hispida])

HSP 1 Score: 309 bits (792), Expect = 1.11e-100
Identity = 181/244 (74.18%), Postives = 197/244 (80.74%), Query Frame = 0


Query: 2   SSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLT 61
           SSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAI++LGGHQ  TPKLVLQLMDVKGLT
Sbjct: 3   SSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIQKLGGHQ-TTPKLVLQLMDVKGLT 62

Query: 62  ISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNLE---------DDEGEDGCVEEEVV 121
           ISHVKSHLQMYRSMRADMGRQDRS S TLQ+K+SN +         D++ +DGCVEEEVV
Sbjct: 63  ISHVKSHLQMYRSMRADMGRQDRS-SLTLQKKLSNFDCNGDNDNDNDNDNDDGCVEEEVV 122

Query: 122 KGGRIIYRSRTIQSPASKGIKIGW---EERIISRNEGYYGNGNNGERENIKRKKMCDSES 181
           K G IIYRSRTIQ+PASK  KI     EERI SRN GYY  G +   ENIK K M DSES
Sbjct: 123 KEGGIIYRSRTIQTPASKRAKIRSIKEEERIKSRNYGYYNYGESEGMENIKIKMMGDSES 182

Query: 182 DGFVLNQSATANHAFKMMKQEAHEKA-EKIKESKCFELSLSLSLQHHYHHSSSEMSEAIS 232
           +G   NQSA  N AFKMMK+E HE+  E+ KE+K FELSLSLSLQ +YHHSSSEMSEAIS
Sbjct: 183 NGVAPNQSAKPNDAFKMMKREEHEREDEEEKENKYFELSLSLSLQQNYHHSSSEMSEAIS 242

[Close]

BLAST of Chy10G171980 vs. NCBI nr
Match: XP_038892745.1 (putative Myb family transcription factor At1g14600 isoform X3 [Benincasa hispida])

HSP 1 Score: 299 bits (766), Expect = 8.06e-97
Identity = 177/244 (72.54%), Postives = 193/244 (79.10%), Query Frame = 0


Query: 2   SSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLT 61
           SSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAI++LGGHQKATPKLVLQLMDVKGLT
Sbjct: 3   SSNSCGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIQKLGGHQKATPKLVLQLMDVKGLT 62

Query: 62  ISHVKSHLQMYRSMRADMGRQDRSCSSTLQRKVSNLE---------DDEGEDGCVEEEVV 121
           ISH      MYRSMRADMGRQDRS S TLQ+K+SN +         D++ +DGCVEEEVV
Sbjct: 63  ISH------MYRSMRADMGRQDRS-SLTLQKKLSNFDCNGDNDNDNDNDNDDGCVEEEVV 122

Query: 122 KGGRIIYRSRTIQSPASKGIKIGW---EERIISRNEGYYGNGNNGERENIKRKKMCDSES 181
           K G IIYRSRTIQ+PASK  KI     EERI SRN GYY  G +   ENIK K M DSES
Sbjct: 123 KEGGIIYRSRTIQTPASKRAKIRSIKEEERIKSRNYGYYNYGESEGMENIKIKMMGDSES 182

Query: 182 DGFVLNQSATANHAFKMMKQEAHEKA-EKIKESKCFELSLSLSLQHHYHHSSSEMSEAIS 232
           +G   NQSA  N AFKMMK+E HE+  E+ KE+K FELSLSLSLQ +YHHSSSEMSEAIS
Sbjct: 183 NGVAPNQSAKPNDAFKMMKREEHEREDEEEKENKYFELSLSLSLQQNYHHSSSEMSEAIS 239

[Close]

BLAST of Chy10G171980 vs. TAIR 10
Match: AT1G14600.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 2.1e-27
Identity = 100/254 (39.37%), Postives = 134/254 (52.76%), Query Frame = 0


Query: 6   CGRN-----GSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGL 65
           CGR+     G VR Y+RS VPRLRWTP+LH SFV A++ LGG  KATPKLVL++MDVKGL
Sbjct: 4   CGRSNDGVIGGVRPYVRSPVPRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGL 63

Query: 66  TISHVKSHLQMYRSMRAD-MGRQDRSCS-STLQRKVSNLEDDEGEDGC---VEEEVVKGG 125
           TISHVKSHLQMYR  R   +G+ + S S S+ +R+  + E+D   D        + + G 
Sbjct: 64  TISHVKSHLQMYRGSRITLLGKPEESSSPSSRRRRRQDNEEDHLHDNLSVHARNDCLLGF 123

Query: 126 RII-YRSRTIQSPASKGIKIGWEERIISRNEGYYGNGNNGERENIKRKKMCDSESDGFVL 185
               +R +T  +       +      + R + + GNG     E+IK +     E++    
Sbjct: 124 HSFNFREQTSATDNDDDDFLNIMN--MERTKTFAGNG-----ESIKFQSHHSLEAEN--- 183

Query: 186 NQSATANHAFKMMKQEAHEKAEKIKESKCFELSLSLSLQHHYHH----------SSSEMS 239
               T N      ++  HE+ E        ELSLSLSL H ++H          S SE S
Sbjct: 184 ----TKNIWKNTWRENEHEEEE--------ELSLSLSLNHPHNHQQRWKSNASSSLSETS 235

[Close]

BLAST of Chy10G171980 vs. TAIR 10
Match: AT2G02060.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 2.1e-27
Identity = 94/255 (36.86%), Postives = 129/255 (50.59%), Query Frame = 0


Query: 5   SCGRNGS----------VRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQL 64
           S GRNG+          VR Y+RS VPRLRWTPDLH  FV A+E LGG  +ATPKLVL++
Sbjct: 4   SSGRNGNGSFNGNKFHGVRPYVRSPVPRLRWTPDLHRCFVHAVEILGGQHRATPKLVLKM 63

Query: 65  MDVKGLTISHVKSHLQMYR-SMRADMGRQDRSCSSTLQRKVSNLEDDEGEDGCVEEEVVK 124
           MDVKGLTISHVKSHLQMYR   +  + + + S SS+++R+  + ED              
Sbjct: 64  MDVKGLTISHVKSHLQMYRGGSKLTLEKPEESSSSSIRRRQDSEED-------------- 123

Query: 125 GGRIIYRSRTIQSPASKGIKIGWEERIISRNEGYYGNGNNGERENIKRKKMCDSESDGF- 184
                Y    +         +G+    +S +  + G G        + K+   SES G+ 
Sbjct: 124 ----YYLHDNLSLHTRNDCLLGFHSFPLSSHSSFRGGGGG------RTKEQQTSESGGYD 183

Query: 185 ---------VLNQSAT-ANHAFKMMKQEAHEKAEKIKESKCFELSLSLSLQHHYHHSS-- 233
                     +N + T  +H F    +E  E+  + +E    +LSLSLSL HH+  S+  
Sbjct: 184 DDADFLHIKKMNDTTTFLSHHFPKGTEEWREQEHEEEEE---DLSLSLSLNHHHWRSNGS 231

[Close]

BLAST of Chy10G171980 vs. TAIR 10
Match: AT2G38300.1 (myb-like HTH transcriptional regulator family protein )

HSP 1 Score: 109.0 bits (271), Expect = 8.3e-24
Identity = 53/82 (64.63%), Postives = 65/82 (79.27%), Query Frame = 0


Query: 1   MSSNS----CGRNGSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMD 60
           +SSNS      +   VR Y+RSKVPRLRWTPDLH  FV A+ERLGG ++ATPKLV Q+M+
Sbjct: 31  VSSNSTVEESDKKTKVRPYVRSKVPRLRWTPDLHLRFVRAVERLGGQERATPKLVRQMMN 90

Query: 61  VKGLTISHVKSHLQMYRSMRAD 79
           +KGL+I+HVKSHLQMYRS + D
Sbjct: 91  IKGLSIAHVKSHLQMYRSKKID 112

[Close]

BLAST of Chy10G171980 vs. TAIR 10
Match: AT2G40260.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 108.6 bits (270), Expect = 1.1e-23
Identity = 51/69 (73.91%), Postives = 59/69 (85.51%), Query Frame = 0


Query: 10  GSVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLTISHVKSHL 69
           GSVR Y RSK PRLRWTP+LH  F+ A+ERLGG  +ATPKLVLQLM+VKGL+I+HVKSHL
Sbjct: 72  GSVRPYNRSKTPRLRWTPELHICFLQAVERLGGPDRATPKLVLQLMNVKGLSIAHVKSHL 131

Query: 70  QMYRSMRAD 79
           QMYRS + D
Sbjct: 132 QMYRSKKTD 140

[Close]

BLAST of Chy10G171980 vs. TAIR 10
Match: AT2G42660.1 (Homeodomain-like superfamily protein )

HSP 1 Score: 107.1 bits (266), Expect = 3.2e-23
Identity = 48/68 (70.59%), Postives = 61/68 (89.71%), Query Frame = 0


Query: 11  SVRQYIRSKVPRLRWTPDLHHSFVLAIERLGGHQKATPKLVLQLMDVKGLTISHVKSHLQ 70
           +VRQYIRS +PRLRWTPDLH SFV A++RLGG  +ATPKLVL++M++KGL+I+HVKSHLQ
Sbjct: 41  NVRQYIRSNMPRLRWTPDLHLSFVRAVQRLGGPDRATPKLVLEMMNLKGLSIAHVKSHLQ 100

Query: 71  MYRSMRAD 79
           MYRS + +
Sbjct: 101 MYRSKKLE 108

The following BLAST results are available for this feature:

BLAST of Chy10G171980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A3AWH5	3.0e-26	69.39	Myb family transcription factor MOF1 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q700D9	3.0e-26	39.37	Putative Myb family transcription factor At1g14600 OS=Arabidopsis thaliana OX=37...	[more]
A0A0P0X0C0	6.0e-19	50.00	Myb family transcription factor MPH1 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
Q93WJ9	3.0e-18	32.66	Transcription repressor KAN1 OS=Arabidopsis thaliana OX=3702 GN=KAN1 PE=1 SV=1	[more]
P51430	7.3e-17	73.02	40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3	[more]

BLAST of Chy10G171980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KSV1	2.3e-122	97.84	SANT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G276460 PE=4 S...	[more]
A0A1S4E2S3	3.7e-120	95.26	putative Myb family transcription factor At1g14600 OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1ETT3	1.0e-61	67.84	putative Myb family transcription factor At1g14600 isoform X2 OS=Cucurbita mosch...	[more]
A0A6J1EPP8	6.6e-61	66.52	putative Myb family transcription factor At1g14600 isoform X1 OS=Cucurbita mosch...	[more]
A0A6J1JVP9	1.9e-60	67.11	putative Myb family transcription factor At1g14600 isoform X2 OS=Cucurbita maxim...	[more]

BLAST of Chy10G171980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011655099.1	2.13e-154	97.84	putative Myb family transcription factor At1g14600 [Cucumis sativus] >XP_0317418...	[more]
XP_016902518.1	2.54e-151	95.26	PREDICTED: putative Myb family transcription factor At1g14600 [Cucumis melo]	[more]
XP_038892743.1	7.61e-104	75.00	putative Myb family transcription factor At1g14600 isoform X1 [Benincasa hispida...	[more]
XP_038892744.1	1.11e-100	74.18	putative Myb family transcription factor At1g14600 isoform X2 [Benincasa hispida...	[more]
XP_038892745.1	8.06e-97	72.54	putative Myb family transcription factor At1g14600 isoform X3 [Benincasa hispida...	[more]

BLAST of Chy10G171980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G14600.1	2.1e-27	39.37	Homeodomain-like superfamily protein	[more]
AT2G02060.1	2.1e-27	36.86	Homeodomain-like superfamily protein	[more]
AT2G38300.1	8.3e-24	64.63	myb-like HTH transcriptional regulator family protein	[more]
AT2G40260.1	1.1e-23	73.91	Homeodomain-like superfamily protein	[more]
AT2G42660.1	3.2e-23	70.59	Homeodomain-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (hystrix) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001377	Ribosomal protein S6e	SMART	SM01405	Ribosomal_S6e_2	coord: 223..307 e-value: 2.3E-6 score: 36.8
IPR001377	Ribosomal protein S6e	PFAM	PF01092	Ribosomal_S6e	coord: 229..289 e-value: 3.6E-15 score: 56.1
IPR006447	Myb domain, plants	TIGRFAM	TIGR01557	TIGR01557	coord: 21..74 e-value: 1.7E-22 score: 77.4
IPR017930	Myb domain	PFAM	PF00249	Myb_DNA-binding	coord: 23..73 e-value: 2.3E-5 score: 24.5
None	No IPR available	GENE3D	1.10.10.60		coord: 20..77 e-value: 5.8E-26 score: 92.4
None	No IPR available	PANTHER	PTHR31314:SF93	OS02G0672300 PROTEIN	coord: 1..234
IPR044848	PHR1-like	PANTHER	PTHR31314	MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE	coord: 1..234
IPR018282	Ribosomal protein S6e, conserved site	PROSITE	PS00578	RIBOSOMAL_S6E	coord: 262..273
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 19..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Chy10G171980.1	Chy10G171980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
biological_process	GO:0006412	translation
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0003735	structural constituent of ribosome