CcUC11G225510 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G225510
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr11: 29849126 .. 29849497 (+)
RNA-Seq Expression	CcUC11G225510
Synteny	CcUC11G225510

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCAGGTTGATTCTCAAGGACGCCAAATTACCACTCCGATTCCTTCTTCGCAATCCAGCCTCATCCGCTCCCTCAGCACAAACCATCCAGAATCTTCTTCTTCTTCCAATACTTCCAAGGCAATCTGCATCTGGATTACTCGGTGGCGTTTGTTCGAGCGACCGGCCGCTACTGTCTAGGGATTTAAATTCTAGTTTTGATGGCGGACTTAGGATCGAGGTTAGAGGGAAGCGGGAGCCGGAGATTGAGGAGATAGATGAGTTCGGCGAGAACGAAAGCGAGAGCGATCTCGAGTTCTCCGATGACTTCAGTGGGGACGAATTTTCTGACAACGACGATGCAGAGCCTGAGGATGATGATAATTGA

mRNA sequence

ATGGCTTCCAGGTTGATTCTCAAGGACGCCAAATTACCACTCCGATTCCTTCTTCGCAATCCAGCCTCATCCGCTCCCTCAGCACAAACCATCCAGAATCTTCTTCTTCTTCCAATACTTCCAAGGCAATCTGCATCTGGATTACTCGGTGGCGTTTGTTCGAGCGACCGGCCGCTACTGTCTAGGGATTTAAATTCTAGTTTTGATGGCGGACTTAGGATCGAGGTTAGAGGGAAGCGGGAGCCGGAGATTGAGGAGATAGATGAGTTCGGCGAGAACGAAAGCGAGAGCGATCTCGAGTTCTCCGATGACTTCAGTGGGGACGAATTTTCTGACAACGACGATGCAGAGCCTGAGGATGATGATAATTGA

Coding sequence (CDS)

ATGGCTTCCAGGTTGATTCTCAAGGACGCCAAATTACCACTCCGATTCCTTCTTCGCAATCCAGCCTCATCCGCTCCCTCAGCACAAACCATCCAGAATCTTCTTCTTCTTCCAATACTTCCAAGGCAATCTGCATCTGGATTACTCGGTGGCGTTTGTTCGAGCGACCGGCCGCTACTGTCTAGGGATTTAAATTCTAGTTTTGATGGCGGACTTAGGATCGAGGTTAGAGGGAAGCGGGAGCCGGAGATTGAGGAGATAGATGAGTTCGGCGAGAACGAAAGCGAGAGCGATCTCGAGTTCTCCGATGACTTCAGTGGGGACGAATTTTCTGACAACGACGATGCAGAGCCTGAGGATGATGATAATTGA

Protein sequence

MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLLPILPRQSASGLLGGVCSSDRPLLSRDLNSSFDGGLRIEVRGKREPEIEEIDEFGENESESDLEFSDDFSGDEFSDNDDAEPEDDDN

Homology

[Close]

BLAST of CcUC11G225510 vs. NCBI nr
Match: XP_022976605.1 (uncharacterized protein LOC111476951 [Cucurbita maxima])

HSP 1 Score: 125.6 bits (314), Expect = 3.0e-25
Identity = 83/130 (63.85%), Postives = 95/130 (73.08%), Query Frame = 0


Query: 1   MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLLPILPRQSASGLLGGVCSSDRPLL 60
           MASR ILKD K P+  LLRNPASS P AQ+IQN LL    PRQSASG L  +  SDRPLL
Sbjct: 1   MASRSILKDVKAPIYLLLRNPASSVPLAQSIQNHLL--PFPRQSASGFLRELGLSDRPLL 60

Query: 61  SRDLNSSFDGGLRIEVRGKREPEIEEIDEFGENESESDLEFSDDFSG--------DEFSD 120
            R  NSSFDGG RIEVRGK++P IE+IDE  ++ESESDLE SD F+G        D+FSD
Sbjct: 61  PRHFNSSFDGGFRIEVRGKQQPVIEDIDE--QSESESDLEGSDGFNGEGWEELSADDFSD 120

Query: 121 NDDAEPEDDD 123
           +DDAEP DD+
Sbjct: 121 DDDAEPRDDE 126

[Close]

BLAST of CcUC11G225510 vs. NCBI nr
Match: KAG6591964.1 (hypothetical protein SDJN03_14310, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 120.6 bits (301), Expect = 9.8e-24
Identity = 81/130 (62.31%), Postives = 92/130 (70.77%), Query Frame = 0


Query: 1   MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLLPILPRQSASGLLGGVCSSDRPLL 60
           MASR ILKD K P+ FLLRNPASS P AQ+I N LL    P QSASG L  +  SDRPLL
Sbjct: 1   MASRSILKDVKAPIYFLLRNPASSVPLAQSIHNHLL--PFPTQSASGFLRELGLSDRPLL 60

Query: 61  SRDLNSSFDGGLRIEVRGKREPEIEEIDEFGENESESDLEFSD--------DFSGDEFSD 120
            R  NSSFDGG RIEVRGK++P IE+IDE G  ES+SD E SD        +FSG +FSD
Sbjct: 61  PRHFNSSFDGGFRIEVRGKQQPVIEDIDEQG--ESDSDFEGSDGCDGEGWEEFSGGDFSD 120

Query: 121 NDDAEPEDDD 123
           +DDAEP DD+
Sbjct: 121 DDDAEPGDDE 126

[Close]

BLAST of CcUC11G225510 vs. NCBI nr
Match: XP_022936831.1 (uncharacterized protein LOC111443300 [Cucurbita moschata])

HSP 1 Score: 117.5 bits (293), Expect = 8.3e-23
Identity = 80/130 (61.54%), Postives = 93/130 (71.54%), Query Frame = 0


Query: 1   MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLLPILPRQSASGLLGGVCSSDRPLL 60
           MASR ILKD K P+ FLLRNPASS P AQ+I N LL    P QSASG L  +  SDRPLL
Sbjct: 1   MASRSILKDVKAPIYFLLRNPASSVPLAQSIHNHLL--PFPTQSASGFLRELGLSDRPLL 60

Query: 61  SRDLNSSFDGGLRIEVRGKREPEIEEIDEFGENESESDLEFSD--------DFSGDEFS- 120
            R  NSSFDGG RIEVRGK++P IE+IDE  +++S+SD E SD        +FSGD+FS 
Sbjct: 61  PRHFNSSFDGGFRIEVRGKQQPVIEDIDE--QSDSDSDFEGSDGWDGEGCEEFSGDDFSD 120

Query: 121 DNDDAEPEDD 122
           D+DDAEP DD
Sbjct: 121 DDDDAEPGDD 126

[Close]

BLAST of CcUC11G225510 vs. NCBI nr
Match: KAA0064333.1 (hypothetical protein E6C27_scaffold255G00320 [Cucumis melo var. makuwa])

HSP 1 Score: 109.4 bits (272), Expect = 2.3e-20
Identity = 77/125 (61.60%), Postives = 87/125 (69.60%), Query Frame = 0


Query: 1   MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLLPILPRQSASGLLGGVCSSDRPLL 60
           MASRLILKD K PLRFLLRNPASSAPSAQ IQN LLLPI PRQ  SG LG VC+  RP L
Sbjct: 62  MASRLILKDIKTPLRFLLRNPASSAPSAQAIQN-LLLPI-PRQYPSGFLGQVCTGGRPQL 121

Query: 61  SRDLNSSFDGGLRIEVRGKREPEIEEIDEFGENESESDLEFSDDFSG--DEFSDNDDAEP 120
           S   NSS DGG RIEVRGK+E    + D   E +S+ + E  D F    D+F D D+ EP
Sbjct: 122 SGVFNSSVDGGFRIEVRGKQELANYDDDNM-EIDSDFEKECPDGFDSDDDDFFDTDEMEP 181

Query: 121 EDDDN 124
           +DDD+
Sbjct: 182 QDDDD 183

[Close]

BLAST of CcUC11G225510 vs. NCBI nr
Match: KAE8649846.1 (hypothetical protein Csa_012085 [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 1.1e-19
Identity = 76/123 (61.79%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 1   MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLLPILPRQSASGLLGGVCSSDRPLL 60
           MASRLILKD K PLRFLLRNPASSAPSAQ IQN LLLPI PRQS   +L  VC+ DRP L
Sbjct: 1   MASRLILKDIKAPLRFLLRNPASSAPSAQAIQN-LLLPI-PRQSPPVVLPQVCTRDRPQL 60

Query: 61  SRDLNSSFDGGLRIEVRGKREPEIEEIDEFGENESESDLEFSDDFSGDEFSDNDDAEPED 120
           S  LNS  DGG RIEVRG+++  + + D+  E +S+S+ EFSD+   DE  D +D EP+D
Sbjct: 61  SGVLNSIVDGGFRIEVRGQQK-LMHDDDDNMEVDSDSETEFSDE--DDECYDTEDMEPQD 118

Query: 121 DDN 124
           DD+
Sbjct: 121 DDD 118

[Close]

BLAST of CcUC11G225510 vs. ExPASy TrEMBL
Match: A0A6J1IJY0 (uncharacterized protein LOC111476951 OS=Cucurbita maxima OX=3661 GN=LOC111476951 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.5e-25
Identity = 83/130 (63.85%), Postives = 95/130 (73.08%), Query Frame = 0


Query: 1   MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLLPILPRQSASGLLGGVCSSDRPLL 60
           MASR ILKD K P+  LLRNPASS P AQ+IQN LL    PRQSASG L  +  SDRPLL
Sbjct: 1   MASRSILKDVKAPIYLLLRNPASSVPLAQSIQNHLL--PFPRQSASGFLRELGLSDRPLL 60

Query: 61  SRDLNSSFDGGLRIEVRGKREPEIEEIDEFGENESESDLEFSDDFSG--------DEFSD 120
            R  NSSFDGG RIEVRGK++P IE+IDE  ++ESESDLE SD F+G        D+FSD
Sbjct: 61  PRHFNSSFDGGFRIEVRGKQQPVIEDIDE--QSESESDLEGSDGFNGEGWEELSADDFSD 120

Query: 121 NDDAEPEDDD 123
           +DDAEP DD+
Sbjct: 121 DDDAEPRDDE 126

[Close]

BLAST of CcUC11G225510 vs. ExPASy TrEMBL
Match: A0A6J1F8K5 (uncharacterized protein LOC111443300 OS=Cucurbita moschata OX=3662 GN=LOC111443300 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 4.0e-23
Identity = 80/130 (61.54%), Postives = 93/130 (71.54%), Query Frame = 0


Query: 1   MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLLPILPRQSASGLLGGVCSSDRPLL 60
           MASR ILKD K P+ FLLRNPASS P AQ+I N LL    P QSASG L  +  SDRPLL
Sbjct: 1   MASRSILKDVKAPIYFLLRNPASSVPLAQSIHNHLL--PFPTQSASGFLRELGLSDRPLL 60

Query: 61  SRDLNSSFDGGLRIEVRGKREPEIEEIDEFGENESESDLEFSD--------DFSGDEFS- 120
            R  NSSFDGG RIEVRGK++P IE+IDE  +++S+SD E SD        +FSGD+FS 
Sbjct: 61  PRHFNSSFDGGFRIEVRGKQQPVIEDIDE--QSDSDSDFEGSDGWDGEGCEEFSGDDFSD 120

Query: 121 DNDDAEPEDD 122
           D+DDAEP DD
Sbjct: 121 DDDDAEPGDD 126

[Close]

BLAST of CcUC11G225510 vs. ExPASy TrEMBL
Match: A0A5A7V875 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold255G00320 PE=4 SV=1)

HSP 1 Score: 109.4 bits (272), Expect = 1.1e-20
Identity = 77/125 (61.60%), Postives = 87/125 (69.60%), Query Frame = 0


Query: 1   MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLLPILPRQSASGLLGGVCSSDRPLL 60
           MASRLILKD K PLRFLLRNPASSAPSAQ IQN LLLPI PRQ  SG LG VC+  RP L
Sbjct: 62  MASRLILKDIKTPLRFLLRNPASSAPSAQAIQN-LLLPI-PRQYPSGFLGQVCTGGRPQL 121

Query: 61  SRDLNSSFDGGLRIEVRGKREPEIEEIDEFGENESESDLEFSDDFSG--DEFSDNDDAEP 120
           S   NSS DGG RIEVRGK+E    + D   E +S+ + E  D F    D+F D D+ EP
Sbjct: 122 SGVFNSSVDGGFRIEVRGKQELANYDDDNM-EIDSDFEKECPDGFDSDDDDFFDTDEMEP 181

Query: 121 EDDDN 124
           +DDD+
Sbjct: 182 QDDDD 183

[Close]

BLAST of CcUC11G225510 vs. ExPASy TrEMBL
Match: A0A0A0L3F1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637720 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.4e-07
Identity = 39/44 (88.64%), Postives = 39/44 (88.64%), Query Frame = 0


Query: 1  MASRLILKDAKLPLRFLLRNPASSAPSAQTIQNLLLLPILPRQS 45
          MASRLILKD K PLRFLLRNPASSAPSAQ IQN LLLPI PRQS
Sbjct: 1  MASRLILKDIKAPLRFLLRNPASSAPSAQAIQN-LLLPI-PRQS 42

The following BLAST results are available for this feature:

BLAST of CcUC11G225510 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022976605.1	3.0e-25	63.85	uncharacterized protein LOC111476951 [Cucurbita maxima]	[more]
KAG6591964.1	9.8e-24	62.31	hypothetical protein SDJN03_14310, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022936831.1	8.3e-23	61.54	uncharacterized protein LOC111443300 [Cucurbita moschata]	[more]
KAA0064333.1	2.3e-20	61.60	hypothetical protein E6C27_scaffold255G00320 [Cucumis melo var. makuwa]	[more]
KAE8649846.1	1.1e-19	61.79	hypothetical protein Csa_012085 [Cucumis sativus]	[more]

BLAST of CcUC11G225510 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC11G225510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1IJY0	1.5e-25	63.85	uncharacterized protein LOC111476951 OS=Cucurbita maxima OX=3661 GN=LOC111476951...	[more]
A0A6J1F8K5	4.0e-23	61.54	uncharacterized protein LOC111443300 OS=Cucurbita moschata OX=3662 GN=LOC1114433...	[more]
A0A5A7V875	1.1e-20	61.60	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A0A0L3F1	1.4e-07	88.64	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G637720 PE=4 SV=1	[more]

BLAST of CcUC11G225510 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..123
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G225510.1	CcUC11G225510.1	mRNA