CcUC11G225250 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC11G225250
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	ethylene-responsive transcription factor 4
Location	CicolChr11: 29581404 .. 29582018 (+)
RNA-Seq Expression	CcUC11G225250
Synteny	CcUC11G225250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGCCGGAGACCGGTCGACATCCACCGCCTCAACCGCCGCGCCGCCTCATTCTAAAGAGATCCGCTACAGGGGCGTCAGAAAGAGGCCGTGGGGCCGCTACGCCGCGGAAATCCGGGACCCACGTAAGAAGACTAGGGTTTGGCTTGGCACATTCAACACCGCTGAAGAGGCGGCGCGTGCTTATGACACGGCCGCGCGTGAATTTAGAGGTGTTAATGCCAAAACTAACTTCCCCGTCCAGAACGAATTCCTAATCGTCGACAACAATAACAACTTCCGTAAATCCGCTGGCAGCAGTAGTCCCAGCCAGTGCAGCACCGTCGAATCCTCTTCCCCTTCGCCAGCGCCGTCGGATCCTTCCCTCACTCACTTCCTCGACGGCGGCGTCCACGCGCCGGCCACTAACCGCCCAATTTTCTTCTTCGACGCGTTCGCTCAGACAGAGAAGATCAGTGACTATCGTCGTACCGTTACCGTCGCCGTCGCCGTCGCCGGTGCTGGCGAATCCGTGAGCGACTCTGATTCGTCATCCGTAGTTGATTTCGACAGTACGCGGAAATCTCGGCCGTTGGATTTTGACCTGAATCTTCCGGCTGTGGAAGTTGTTTGA

mRNA sequence

ATGGCTGCCGGAGACCGGTCGACATCCACCGCCTCAACCGCCGCGCCGCCTCATTCTAAAGAGATCCGCTACAGGGGCGTCAGAAAGAGGCCGTGGGGCCGCTACGCCGCGGAAATCCGGGACCCACGTAAGAAGACTAGGGTTTGGCTTGGCACATTCAACACCGCTGAAGAGGCGGCGCGTGCTTATGACACGGCCGCGCGTGAATTTAGAGGTGTTAATGCCAAAACTAACTTCCCCGTCCAGAACGAATTCCTAATCGTCGACAACAATAACAACTTCCGTAAATCCGCTGGCAGCAGTAGTCCCAGCCAGTGCAGCACCGTCGAATCCTCTTCCCCTTCGCCAGCGCCGTCGGATCCTTCCCTCACTCACTTCCTCGACGGCGGCGTCCACGCGCCGGCCACTAACCGCCCAATTTTCTTCTTCGACGCGTTCGCTCAGACAGAGAAGATCAGTGACTATCGTCGTACCGTTACCGTCGCCGTCGCCGTCGCCGGTGCTGGCGAATCCGTGAGCGACTCTGATTCGTCATCCGTAGTTGATTTCGACAGTACGCGGAAATCTCGGCCGTTGGATTTTGACCTGAATCTTCCGGCTGTGGAAGTTGTTTGA

Coding sequence (CDS)

ATGGCTGCCGGAGACCGGTCGACATCCACCGCCTCAACCGCCGCGCCGCCTCATTCTAAAGAGATCCGCTACAGGGGCGTCAGAAAGAGGCCGTGGGGCCGCTACGCCGCGGAAATCCGGGACCCACGTAAGAAGACTAGGGTTTGGCTTGGCACATTCAACACCGCTGAAGAGGCGGCGCGTGCTTATGACACGGCCGCGCGTGAATTTAGAGGTGTTAATGCCAAAACTAACTTCCCCGTCCAGAACGAATTCCTAATCGTCGACAACAATAACAACTTCCGTAAATCCGCTGGCAGCAGTAGTCCCAGCCAGTGCAGCACCGTCGAATCCTCTTCCCCTTCGCCAGCGCCGTCGGATCCTTCCCTCACTCACTTCCTCGACGGCGGCGTCCACGCGCCGGCCACTAACCGCCCAATTTTCTTCTTCGACGCGTTCGCTCAGACAGAGAAGATCAGTGACTATCGTCGTACCGTTACCGTCGCCGTCGCCGTCGCCGGTGCTGGCGAATCCGTGAGCGACTCTGATTCGTCATCCGTAGTTGATTTCGACAGTACGCGGAAATCTCGGCCGTTGGATTTTGACCTGAATCTTCCGGCTGTGGAAGTTGTTTGA

Protein sequence

MAAGDRSTSTASTAAPPHSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGVNAKTNFPVQNEFLIVDNNNNFRKSAGSSSPSQCSTVESSSPSPAPSDPSLTHFLDGGVHAPATNRPIFFFDAFAQTEKISDYRRTVTVAVAVAGAGESVSDSDSSSVVDFDSTRKSRPLDFDLNLPAVEVV

Homology

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BLAST of CcUC11G225250 vs. NCBI nr
Match: XP_038897001.1 (ethylene-responsive transcription factor 4 [Benincasa hispida])

HSP 1 Score: 338.6 bits (867), Expect = 3.8e-89
Identity = 177/204 (86.76%), Postives = 188/204 (92.16%), Query Frame = 0


Query: 1   MAAGDRSTSTASTAAPPHSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           M AGDRSTSTASTAAPP+SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA
Sbjct: 1   MVAGDRSTSTASTAAPPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGVNAKTNFPVQNEFLIVDNNNNFRKSAGSSSPSQCSTVESSSPSPAPSD 120
           RAYDTAAREFRG NAKTNFP+QNEFL+VDNNNNF KSA S+SPSQ STV+SSSPSPAPSD
Sbjct: 61  RAYDTAAREFRGANAKTNFPIQNEFLMVDNNNNFHKSACSTSPSQSSTVDSSSPSPAPSD 120

Query: 121 PSLTHFLDGGVHAPATNRPIFFFDAFAQTEKISDYRRTVTVAVAVAGAGESVSDSDSSSV 180
           PSLTHFL+   HAP  +RPIFFFDAFAQ E+IS++RR VT   AVAGAG SVSDSDSSSV
Sbjct: 121 PSLTHFLNSSNHAPTISRPIFFFDAFAQAERISEFRRNVT--NAVAGAGGSVSDSDSSSV 180

Query: 181 VDFDSTRKSRPLDFDLNLPAVEVV 205
           VDFD+TRKSRPLDFDLNLPAVEVV
Sbjct: 181 VDFDTTRKSRPLDFDLNLPAVEVV 202

[Close]

BLAST of CcUC11G225250 vs. NCBI nr
Match: XP_008463800.1 (PREDICTED: ethylene-responsive transcription factor 4 [Cucumis melo] >KAA0066812.1 ethylene-responsive transcription factor 4 [Cucumis melo var. makuwa] >TYK27959.1 ethylene-responsive transcription factor 4 [Cucumis melo var. makuwa])

HSP 1 Score: 307.4 bits (786), Expect = 9.4e-80
Identity = 169/205 (82.44%), Postives = 178/205 (86.83%), Query Frame = 0


Query: 1   MAAGDRSTSTASTAAPPHSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           MAAGDRSTS    AAPP+SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA
Sbjct: 1   MAAGDRSTS----AAPPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGVNAKTNFPVQNEFLIVDNNN-NFRKSAGSSSPSQCSTVESSSPSPAPS 120
           RAYDTAAREFRG NAKTNFPVQN+FLIVDNN+ NF KSA SSSPS  STVESSSPSP PS
Sbjct: 61  RAYDTAAREFRGANAKTNFPVQNDFLIVDNNHTNFHKSACSSSPSHSSTVESSSPSPTPS 120

Query: 121 DPSLTHFLDGGVHAPATNRPIFFFDAFAQTEKISDYRRTVTVAVAVAGAGESVSDSDSSS 180
           +P    +LDGG+HAP  +RPIFFFDAFAQ EKISD+RRTVT A A A      SDSDSSS
Sbjct: 121 NP----YLDGGIHAPGISRPIFFFDAFAQAEKISDFRRTVTAAAAGA------SDSDSSS 180

Query: 181 VVDFDSTRKSRPLDFDLNLPAVEVV 205
           VVDFD+TRKSRPLDFDLNLPAVEVV
Sbjct: 181 VVDFDTTRKSRPLDFDLNLPAVEVV 191

[Close]

BLAST of CcUC11G225250 vs. NCBI nr
Match: XP_023536061.1 (ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303.1 bits (775), Expect = 1.8e-78
Identity = 167/204 (81.86%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 1   MAAGDRSTSTASTAAPPHSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           MAAGD+STSTAS A   +SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA
Sbjct: 1   MAAGDKSTSTASAAVASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGVNAKTNFPVQNEFLIVDNNNNFRKSAGSSSPSQCSTVESSSPSPAPSD 120
           RAYDTAAREFRG +AKTNFPV N FL VDNNNNFRKSA  SSPSQ STVESSSPSPAPSD
Sbjct: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSA-CSSPSQSSTVESSSPSPAPSD 120

Query: 121 PSLTHFLDGGVHAPATNRPIFFFDAFAQTEKISDYRRTVTVAVAVAGAGESVSDSDSSSV 180
           P++TH     VHAPA +RPIFFF+AFAQ EK SD+RR VT      GAG S SDSDSSSV
Sbjct: 121 PAITH-----VHAPAISRPIFFFEAFAQVEKNSDFRRIVT------GAGGSRSDSDSSSV 180

Query: 181 VDFDSTRKSRPLDFDLNLPAVEVV 205
           VDFD TRKSRPLDFDLNLPAVEVV
Sbjct: 181 VDFDRTRKSRPLDFDLNLPAVEVV 192

[Close]

BLAST of CcUC11G225250 vs. NCBI nr
Match: KAG7024813.1 (Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 300.8 bits (769), Expect = 8.8e-78
Identity = 165/204 (80.88%), Postives = 175/204 (85.78%), Query Frame = 0


Query: 1   MAAGDRSTSTASTAAPPHSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           MA+GD+STSTAS A   +SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA
Sbjct: 1   MASGDQSTSTASAAVASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGVNAKTNFPVQNEFLIVDNNNNFRKSAGSSSPSQCSTVESSSPSPAPSD 120
           RAYDTAAREFRG +AKTNFPV N FL VDNNNNFRKSA  +SPSQCSTVES+SPSPAPSD
Sbjct: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSA-CNSPSQCSTVESTSPSPAPSD 120

Query: 121 PSLTHFLDGGVHAPATNRPIFFFDAFAQTEKISDYRRTVTVAVAVAGAGESVSDSDSSSV 180
           P++T      VHAPA +RPIFFFDAFAQ EK SD+RR VT      GAG S SDSDSSSV
Sbjct: 121 PAIT-----DVHAPAISRPIFFFDAFAQVEKNSDFRRIVT------GAGGSRSDSDSSSV 180

Query: 181 VDFDSTRKSRPLDFDLNLPAVEVV 205
           VDFD TRKSRPLDFDLNLPAVEVV
Sbjct: 181 VDFDRTRKSRPLDFDLNLPAVEVV 192

[Close]

BLAST of CcUC11G225250 vs. NCBI nr
Match: XP_022935731.1 (ethylene-responsive transcription factor 4-like [Cucurbita moschata])

HSP 1 Score: 300.4 bits (768), Expect = 1.1e-77
Identity = 166/204 (81.37%), Postives = 174/204 (85.29%), Query Frame = 0


Query: 1   MAAGDRSTSTASTAAPPHSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           MAAGD+STSTAS A   +SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGT NTAEEAA
Sbjct: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60

Query: 61  RAYDTAAREFRGVNAKTNFPVQNEFLIVDNNNNFRKSAGSSSPSQCSTVESSSPSPAPSD 120
           RAYDTAAREFRG +AKTNFPV N FL VDNNNNFRKSA  SSPSQCSTVES+SPSPAPSD
Sbjct: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSA-CSSPSQCSTVESTSPSPAPSD 120

Query: 121 PSLTHFLDGGVHAPATNRPIFFFDAFAQTEKISDYRRTVTVAVAVAGAGESVSDSDSSSV 180
           P++T      VHAPA +RPIFFFDAFAQ EK SD+RR VT      GAG S SDSDSSSV
Sbjct: 121 PTIT-----DVHAPAISRPIFFFDAFAQVEKNSDFRRIVT------GAGGSRSDSDSSSV 180

Query: 181 VDFDSTRKSRPLDFDLNLPAVEVV 205
           VDFD TRKSRPLDFDLNLPAVEVV
Sbjct: 181 VDFDRTRKSRPLDFDLNLPAVEVV 192

[Close]

BLAST of CcUC11G225250 vs. ExPASy Swiss-Prot
Match: O80340 (Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 7.3e-35
Identity = 100/203 (49.26%), Postives = 125/203 (61.58%), Query Frame = 0


Query: 18  HSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGVNAKT 77
           ++KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYDTAAR+FRG  AKT
Sbjct: 19  NAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKT 78

Query: 78  NFPVQNEFLIVDNNNNFRKSAGSSSPSQCSTVESSSPSP--APS------DPSLTHFLDG 137
           NFP       ++ ++    +  + SPSQ ST++ +SP     PS       P L   L G
Sbjct: 79  NFPT-----FLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATAGNVPPQLELSLGG 138

Query: 138 G----VHAPATNRPIFFFDAF-------AQTEKISDYRRTVTVAVAVAGAGESVSDSDSS 197
           G     +    +RP++F D          Q   ++   R+  V VA   A  + SDSDSS
Sbjct: 139 GGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATKMACGAQSDSDSS 198

Query: 198 SVVDFDS--TRKSRPLDFDLNLP 200
           SVVDF+    ++S+ LD DLNLP
Sbjct: 199 SVVDFEGGMEKRSQLLDLDLNLP 216

[Close]

BLAST of CcUC11G225250 vs. ExPASy Swiss-Prot
Match: Q9MAI5 (Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ERF8 PE=1 SV=1)

HSP 1 Score: 125.2 bits (313), Expect = 8.7e-28
Identity = 90/187 (48.13%), Postives = 115/187 (61.50%), Query Frame = 0


Query: 19  SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGVNAKTN 78
           +KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TA++AARAYD AAR+FRGV AKTN
Sbjct: 26  AKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTN 85

Query: 79  FPVQNEFLIVDNNNNFRKSAGSSSPSQCST-VESSSPSPAPSDPSLTHFLDGG----VHA 138
           F V     IV            SSP+Q ST V+S + +   + P L   L GG       
Sbjct: 86  FGV-----IV-----------GSSPTQSSTVVDSPTAARFITPPHLELSLGGGGACRRKI 145

Query: 139 PATNRPIFFFDAFAQTEKISDYRRTVTVAVAVAGAGESVSDSDSSSVVDFD--STRKSRP 198
           P  + P+++++       ++ Y +  T  V         S+S++SSVVDF+  + + S P
Sbjct: 146 PLVH-PVYYYN-------MATYPKMTTCGVQ--------SESETSSVVDFEGGAGKISPP 180

[Close]

BLAST of CcUC11G225250 vs. ExPASy Swiss-Prot
Match: Q40477 (Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 PE=1 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-27
Identity = 92/212 (43.40%), Postives = 110/212 (51.89%), Query Frame = 0


Query: 20  KEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGVNAKTNF 79
           KE+ YRGVRKRPWGRYAAEIRDP KK+RVWLGTF+TAEEAA+AYDTAAREFRG  AKTNF
Sbjct: 23  KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 80  PVQNEFLIVDNNNNFRKSAGSSSPSQCSTVESSS-------PSPAPSDPSLTHFL----- 139
           P   E               + SPS  STVESSS       P  AP +  LT  L     
Sbjct: 83  PSPTE---------------NQSPSHSSTVESSSGENGVHAPPHAPLELDLTRRLGSVAA 142

Query: 140 DGG-------------------VHAPATNRPIFFFDAFAQTEKISDYRRTVTVAVAVAG- 199
           DGG                   V      +P+  FD+  +   ++  +      +   G 
Sbjct: 143 DGGDNCRRSGEVGYPIFHQQPTVAVLPNGQPVLLFDSLWRAGVVNRPQPYHVTPMGFNGV 202

[Close]

BLAST of CcUC11G225250 vs. ExPASy Swiss-Prot
Match: Q9LW49 (Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ERF4 PE=2 SV=1)

HSP 1 Score: 123.6 bits (309), Expect = 2.5e-27
Identity = 91/214 (42.52%), Postives = 114/214 (53.27%), Query Frame = 0


Query: 20  KEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGVNAKTNF 79
           KE+ YRGVRKRPWGRYAAEIRDP KK+RVWLGTF+TAEEAA+AYDTAAREFRG  AKTNF
Sbjct: 23  KEVHYRGVRKRPWGRYAAEIRDPGKKSRVWLGTFDTAEEAAKAYDTAAREFRGPKAKTNF 82

Query: 80  PVQNEFLIVDNNNNFRKSAGSSSPSQCSTVESSS-------PSPAPSDPSLTHFL----- 139
           P+ +E               + S S  ST+ESSS       P  AP +  LT  L     
Sbjct: 83  PLPSE---------------NQSTSHSSTMESSSGETGIHAPPHAPLELDLTRRLGSVAA 142

Query: 140 DGG-------------------VHAPATNRPIFFFDAFAQTEKISDYRRTVTVAVAV--- 199
           DGG                   V      +P+  FD+  +   ++  +    + +A+   
Sbjct: 143 DGGDNCRRSGEVGYPIFHQQPTVAVLPNGQPVLLFDSLWRPGVVNRPQPYHVMPMAMGFN 202

[Close]

BLAST of CcUC11G225250 vs. ExPASy Swiss-Prot
Match: Q9FE67 (Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ERF9 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.1e-25
Identity = 56/71 (78.87%), Postives = 62/71 (87.32%), Query Frame = 0


Query: 20 KEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGVNAKTNF 79
          KE+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYDTAAREFRG  AKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 80 PVQNEFLIVDN 91
          P+  E   V++
Sbjct: 89 PLPGESTTVND 99

[Close]

BLAST of CcUC11G225250 vs. ExPASy TrEMBL
Match: A0A5A7VEL4 (Ethylene-responsive transcription factor 4 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold384G001630 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.5e-80
Identity = 169/205 (82.44%), Postives = 178/205 (86.83%), Query Frame = 0


Query: 1   MAAGDRSTSTASTAAPPHSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           MAAGDRSTS    AAPP+SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA
Sbjct: 1   MAAGDRSTS----AAPPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGVNAKTNFPVQNEFLIVDNNN-NFRKSAGSSSPSQCSTVESSSPSPAPS 120
           RAYDTAAREFRG NAKTNFPVQN+FLIVDNN+ NF KSA SSSPS  STVESSSPSP PS
Sbjct: 61  RAYDTAAREFRGANAKTNFPVQNDFLIVDNNHTNFHKSACSSSPSHSSTVESSSPSPTPS 120

Query: 121 DPSLTHFLDGGVHAPATNRPIFFFDAFAQTEKISDYRRTVTVAVAVAGAGESVSDSDSSS 180
           +P    +LDGG+HAP  +RPIFFFDAFAQ EKISD+RRTVT A A A      SDSDSSS
Sbjct: 121 NP----YLDGGIHAPGISRPIFFFDAFAQAEKISDFRRTVTAAAAGA------SDSDSSS 180

Query: 181 VVDFDSTRKSRPLDFDLNLPAVEVV 205
           VVDFD+TRKSRPLDFDLNLPAVEVV
Sbjct: 181 VVDFDTTRKSRPLDFDLNLPAVEVV 191

[Close]

BLAST of CcUC11G225250 vs. ExPASy TrEMBL
Match: A0A1S3CLM9 (ethylene-responsive transcription factor 4 OS=Cucumis melo OX=3656 GN=LOC103501853 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.5e-80
Identity = 169/205 (82.44%), Postives = 178/205 (86.83%), Query Frame = 0


Query: 1   MAAGDRSTSTASTAAPPHSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           MAAGDRSTS    AAPP+SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA
Sbjct: 1   MAAGDRSTS----AAPPNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGVNAKTNFPVQNEFLIVDNNN-NFRKSAGSSSPSQCSTVESSSPSPAPS 120
           RAYDTAAREFRG NAKTNFPVQN+FLIVDNN+ NF KSA SSSPS  STVESSSPSP PS
Sbjct: 61  RAYDTAAREFRGANAKTNFPVQNDFLIVDNNHTNFHKSACSSSPSHSSTVESSSPSPTPS 120

Query: 121 DPSLTHFLDGGVHAPATNRPIFFFDAFAQTEKISDYRRTVTVAVAVAGAGESVSDSDSSS 180
           +P    +LDGG+HAP  +RPIFFFDAFAQ EKISD+RRTVT A A A      SDSDSSS
Sbjct: 121 NP----YLDGGIHAPGISRPIFFFDAFAQAEKISDFRRTVTAAAAGA------SDSDSSS 180

Query: 181 VVDFDSTRKSRPLDFDLNLPAVEVV 205
           VVDFD+TRKSRPLDFDLNLPAVEVV
Sbjct: 181 VVDFDTTRKSRPLDFDLNLPAVEVV 191

[Close]

BLAST of CcUC11G225250 vs. ExPASy TrEMBL
Match: A0A6J1F5I9 (ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN=LOC111442554 PE=4 SV=1)

HSP 1 Score: 300.4 bits (768), Expect = 5.6e-78
Identity = 166/204 (81.37%), Postives = 174/204 (85.29%), Query Frame = 0


Query: 1   MAAGDRSTSTASTAAPPHSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           MAAGD+STSTAS A   +SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGT NTAEEAA
Sbjct: 1   MAAGDQSTSTASAAEASNSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTINTAEEAA 60

Query: 61  RAYDTAAREFRGVNAKTNFPVQNEFLIVDNNNNFRKSAGSSSPSQCSTVESSSPSPAPSD 120
           RAYDTAAREFRG +AKTNFPV N FL VDNNNNFRKSA  SSPSQCSTVES+SPSPAPSD
Sbjct: 61  RAYDTAAREFRGADAKTNFPVPNGFLTVDNNNNFRKSA-CSSPSQCSTVESTSPSPAPSD 120

Query: 121 PSLTHFLDGGVHAPATNRPIFFFDAFAQTEKISDYRRTVTVAVAVAGAGESVSDSDSSSV 180
           P++T      VHAPA +RPIFFFDAFAQ EK SD+RR VT      GAG S SDSDSSSV
Sbjct: 121 PTIT-----DVHAPAISRPIFFFDAFAQVEKNSDFRRIVT------GAGGSRSDSDSSSV 180

Query: 181 VDFDSTRKSRPLDFDLNLPAVEVV 205
           VDFD TRKSRPLDFDLNLPAVEVV
Sbjct: 181 VDFDRTRKSRPLDFDLNLPAVEVV 192

[Close]

BLAST of CcUC11G225250 vs. ExPASy TrEMBL
Match: A0A6J1IML9 (ethylene-responsive transcription factor 4-like OS=Cucurbita maxima OX=3661 GN=LOC111476936 PE=4 SV=1)

HSP 1 Score: 293.5 bits (750), Expect = 6.8e-76
Identity = 161/204 (78.92%), Postives = 173/204 (84.80%), Query Frame = 0


Query: 1   MAAGDRSTSTASTAAPPHSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           MAA DRSTST S A   +S+EIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA
Sbjct: 1   MAANDRSTSTVSAAVASNSEEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGVNAKTNFPVQNEFLIVDNNNNFRKSAGSSSPSQCSTVESSSPSPAPSD 120
           RAYDTAAREFRG +AKTNFPV N+F I+D NNNFRKSA  S+PSQCSTVESSSPSPAP D
Sbjct: 61  RAYDTAAREFRGADAKTNFPVPNDFQIIDINNNFRKSA-CSNPSQCSTVESSSPSPAPLD 120

Query: 121 PSLTHFLDGGVHAPATNRPIFFFDAFAQTEKISDYRRTVTVAVAVAGAGESVSDSDSSSV 180
           P+LT+     VHAP+ +RPIFFFDAFAQ EK SD+RR V+V      AG S SDSDSSSV
Sbjct: 121 PALTY-----VHAPSISRPIFFFDAFAQVEKNSDFRRIVSV------AGRSRSDSDSSSV 180

Query: 181 VDFDSTRKSRPLDFDLNLPAVEVV 205
           VDFD TRKSRPLDFDLNLPAVEVV
Sbjct: 181 VDFDRTRKSRPLDFDLNLPAVEVV 192

[Close]

BLAST of CcUC11G225250 vs. ExPASy TrEMBL
Match: A0A0A0L4P1 (Ethylene response factor 2 OS=Cucumis sativus OX=3659 GN=Csa_4G630010 PE=4 SV=1)

HSP 1 Score: 292.0 bits (746), Expect = 2.0e-75
Identity = 164/207 (79.23%), Postives = 172/207 (83.09%), Query Frame = 0


Query: 1   MAAGDRSTSTASTAAPPHSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60
           MAAGDRSTST     PP SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA
Sbjct: 1   MAAGDRSTST----TPPTSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAA 60

Query: 61  RAYDTAAREFRGVNAKTNFPVQNEFLIVDNNN--NFRKSAGSSSPSQCSTVESSSPSPAP 120
           RAYD AAREFRG NAKTNFP+Q +FLIVDNNN  NF KSA S+SPS  STVESSSPSP P
Sbjct: 61  RAYDAAAREFRGANAKTNFPLQTDFLIVDNNNHSNFHKSACSTSPSHSSTVESSSPSPTP 120

Query: 121 SDPSLTHFLDGGVHAPATNRPIFFFDAFAQTEK-ISDYRRTVTVAVAVAGAGESVSDSDS 180
           SDP    +LDGG+H P  + PIFFFDAFAQ EK ISD+RRTVT AVA A      SDSDS
Sbjct: 121 SDP----YLDGGIHPPGISPPIFFFDAFAQAEKNISDFRRTVTAAVAGA------SDSDS 180

Query: 181 SSVVDFDSTRKSRPLDFDLNLPAVEVV 205
           SSV DFD+TRKSRPLDFDLNLPAVEVV
Sbjct: 181 SSVGDFDTTRKSRPLDFDLNLPAVEVV 193

[Close]

BLAST of CcUC11G225250 vs. TAIR 10
Match: AT3G15210.1 (ethylene responsive element binding factor 4 )

HSP 1 Score: 148.7 bits (374), Expect = 5.2e-36
Identity = 100/203 (49.26%), Postives = 125/203 (61.58%), Query Frame = 0


Query: 18  HSKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGVNAKT 77
           ++KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYDTAAR+FRG  AKT
Sbjct: 19  NAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAARDFRGAKAKT 78

Query: 78  NFPVQNEFLIVDNNNNFRKSAGSSSPSQCSTVESSSPSP--APS------DPSLTHFLDG 137
           NFP       ++ ++    +  + SPSQ ST++ +SP     PS       P L   L G
Sbjct: 79  NFPT-----FLELSDQKVPTGFARSPSQSSTLDCASPPTLVVPSATAGNVPPQLELSLGG 138

Query: 138 G----VHAPATNRPIFFFDAF-------AQTEKISDYRRTVTVAVAVAGAGESVSDSDSS 197
           G     +    +RP++F D          Q   ++   R+  V VA   A  + SDSDSS
Sbjct: 139 GGGGSCYQIPMSRPVYFLDLMGIGNVGRGQPPPVTSAFRSPVVHVATKMACGAQSDSDSS 198

Query: 198 SVVDFDS--TRKSRPLDFDLNLP 200
           SVVDF+    ++S+ LD DLNLP
Sbjct: 199 SVVDFEGGMEKRSQLLDLDLNLP 216

[Close]

BLAST of CcUC11G225250 vs. TAIR 10
Match: AT1G53170.1 (ethylene response factor 8 )

HSP 1 Score: 125.2 bits (313), Expect = 6.1e-29
Identity = 90/187 (48.13%), Postives = 115/187 (61.50%), Query Frame = 0


Query: 19  SKEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGVNAKTN 78
           +KEIRYRGVRKRPWGRYAAEIRDP KKTRVWLGTF+TA++AARAYD AAR+FRGV AKTN
Sbjct: 26  AKEIRYRGVRKRPWGRYAAEIRDPVKKTRVWLGTFDTAQQAARAYDAAARDFRGVKAKTN 85

Query: 79  FPVQNEFLIVDNNNNFRKSAGSSSPSQCST-VESSSPSPAPSDPSLTHFLDGG----VHA 138
           F V     IV            SSP+Q ST V+S + +   + P L   L GG       
Sbjct: 86  FGV-----IV-----------GSSPTQSSTVVDSPTAARFITPPHLELSLGGGGACRRKI 145

Query: 139 PATNRPIFFFDAFAQTEKISDYRRTVTVAVAVAGAGESVSDSDSSSVVDFD--STRKSRP 198
           P  + P+++++       ++ Y +  T  V         S+S++SSVVDF+  + + S P
Sbjct: 146 PLVH-PVYYYN-------MATYPKMTTCGVQ--------SESETSSVVDFEGGAGKISPP 180

[Close]

BLAST of CcUC11G225250 vs. TAIR 10
Match: AT5G44210.1 (erf domain protein 9 )

HSP 1 Score: 118.2 bits (295), Expect = 7.5e-27
Identity = 56/71 (78.87%), Postives = 62/71 (87.32%), Query Frame = 0


Query: 20 KEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGVNAKTNF 79
          KE+ +RGVRKRPWGRYAAEIRDP KKTRVWLGTF+TAEEAARAYDTAAREFRG  AKTNF
Sbjct: 29 KEVHFRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTAEEAARAYDTAAREFRGSKAKTNF 88

Query: 80 PVQNEFLIVDN 91
          P+  E   V++
Sbjct: 89 PLPGESTTVND 99

[Close]

BLAST of CcUC11G225250 vs. TAIR 10
Match: AT1G50640.1 (ethylene responsive element binding factor 3 )

HSP 1 Score: 112.5 bits (280), Expect = 4.1e-25
Identity = 82/201 (40.80%), Postives = 100/201 (49.75%), Query Frame = 0


Query: 20  KEIRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGVNAKTNF 79
           KEIR+RGVRKRPWGR+AAEIRDP KK RVWLGTF++AEEAARAYD+AAR  RG  AKTNF
Sbjct: 24  KEIRFRGVRKRPWGRFAAEIRDPWKKARVWLGTFDSAEEAARAYDSAARNLRGPKAKTNF 83

Query: 80  PVQNEFLIVDNNNNFRKSAGSSSPSQCSTVESSSPSPAPSDPSLTH--FLDGGVHAPATN 139
           P+                + S  P      +  + +    DP + H  F D     P  N
Sbjct: 84  PI---------------DSSSPPPPNLRFNQIRNQNQNQVDPFMDHRLFTDHQQQFPIVN 143

Query: 140 RPI---------FFFDAFAQTEKISDYRRTVTVAVAVAGAGESVSDSDSSSVVDFD---- 199
           RP           F      T K +  +R       V     S  DS SS + D D    
Sbjct: 144 RPTSSSMSSTVESFSGPRPTTMKPATTKRYPRTPPVVPEDCHSDCDSSSSVIDDDDDIAS 203

Query: 200 -STRKSRPLDFDLNLPAVEVV 205
            S R++ P  FDLN P ++ V
Sbjct: 204 SSRRRNPPFQFDLNFPPLDCV 209

[Close]

BLAST of CcUC11G225250 vs. TAIR 10
Match: AT1G28370.1 (ERF domain protein 11 )

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-23
Identity = 61/94 (64.89%), Postives = 67/94 (71.28%), Query Frame = 0


Query: 22  IRYRGVRKRPWGRYAAEIRDPRKKTRVWLGTFNTAEEAARAYDTAAREFRGVNAKTNFPV 81
           +RYRGVRKRPWGRYAAEIRDP KK+RVWLGTF+T EEAARAYD  A EFRG  AKTNFP 
Sbjct: 18  VRYRGVRKRPWGRYAAEIRDPFKKSRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFPC 77

Query: 82  QNEFLIVDNNNNFRKSAGSSSPSQCSTVESSSPS 116
                    N N    + + S SQ STVESS P+
Sbjct: 78  Y--------NINAHCLSLTQSLSQSSTVESSFPN 103

The following BLAST results are available for this feature:

BLAST of CcUC11G225250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897001.1	3.8e-89	86.76	ethylene-responsive transcription factor 4 [Benincasa hispida]	[more]
XP_008463800.1	9.4e-80	82.44	PREDICTED: ethylene-responsive transcription factor 4 [Cucumis melo] >KAA0066812...	[more]
XP_023536061.1	1.8e-78	81.86	ethylene-responsive transcription factor 4-like [Cucurbita pepo subsp. pepo]	[more]
KAG7024813.1	8.8e-78	80.88	Ethylene-responsive transcription factor 4, partial [Cucurbita argyrosperma subs...	[more]
XP_022935731.1	1.1e-77	81.37	ethylene-responsive transcription factor 4-like [Cucurbita moschata]	[more]

BLAST of CcUC11G225250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O80340	7.3e-35	49.26	Ethylene-responsive transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q9MAI5	8.7e-28	48.13	Ethylene-responsive transcription factor 8 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]
Q40477	1.1e-27	43.40	Ethylene-responsive transcription factor 4 OS=Nicotiana tabacum OX=4097 GN=ERF4 ...	[more]
Q9LW49	2.5e-27	42.52	Ethylene-responsive transcription factor 4 OS=Nicotiana sylvestris OX=4096 GN=ER...	[more]
Q9FE67	1.1e-25	78.87	Ethylene-responsive transcription factor 9 OS=Arabidopsis thaliana OX=3702 GN=ER...	[more]

BLAST of CcUC11G225250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VEL4	4.5e-80	82.44	Ethylene-responsive transcription factor 4 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CLM9	4.5e-80	82.44	ethylene-responsive transcription factor 4 OS=Cucumis melo OX=3656 GN=LOC1035018...	[more]
A0A6J1F5I9	5.6e-78	81.37	ethylene-responsive transcription factor 4-like OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1IML9	6.8e-76	78.92	ethylene-responsive transcription factor 4-like OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A0A0L4P1	2.0e-75	79.23	Ethylene response factor 2 OS=Cucumis sativus OX=3659 GN=Csa_4G630010 PE=4 SV=1	[more]

BLAST of CcUC11G225250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G15210.1	5.2e-36	49.26	ethylene responsive element binding factor 4	[more]
AT1G53170.1	6.1e-29	48.13	ethylene response factor 8	[more]
AT5G44210.1	7.5e-27	78.87	erf domain protein 9	[more]
AT1G50640.1	4.1e-25	40.80	ethylene responsive element binding factor 3	[more]
AT1G28370.1	1.3e-23	64.89	ERF domain protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 24..35 score: 66.67 coord: 46..62 score: 74.65
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 23..86 e-value: 3.5E-38 score: 142.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 23..72 e-value: 5.7E-14 score: 52.1
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 23..80 score: 24.526342
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 23..82 e-value: 3.60504E-31 score: 106.587
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 22..82 e-value: 1.3E-28 score: 100.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..120
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..16
None	No IPR available	PANTHER	PTHR31677	AP2 DOMAIN CLASS TRANSCRIPTION FACTOR	coord: 132..193 coord: 1..118
None	No IPR available	PANTHER	PTHR31677:SF156	ERF FAMILY PROTEIN	coord: 132..193 coord: 1..118
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 23..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC11G225250.1	CcUC11G225250.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity